BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: c0f47b4ca8772236ddcfc0a9c2c20366.SwissProt.fasta
13 sequences; 3,820 total letters
Query= ACIAD0747
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
P28901 Flavodoxin/ferredoxin--NADP reductase [Shigella flexneri] 173 3e-57
P28861 Flavodoxin/ferredoxin--NADP reductase [Escherichia coli (s... 172 1e-56
Q44532 Ferredoxin--NADP reductase [Azotobacter vinelandii] 166 5e-54
Q9Z615 Flavodoxin/ferredoxin--NADP reductase [Buchnera aphidicola... 156 2e-50
Q89A28 Flavodoxin/ferredoxin--NADP reductase [Buchnera aphidicola... 152 9e-49
P57641 Flavodoxin/ferredoxin--NADP reductase [Buchnera aphidicola... 149 7e-48
Q9L6V3 Flavodoxin/ferredoxin--NADP reductase [Rhodobacter capsula... 141 2e-44
Q51603 Ferredoxin / Ferredoxin--NAD(+) reductase [Burkholderia ce... 67.0 2e-16
O85675 Ferredoxin / Ferredoxin--NAD(+) reductase [Acinetobacter b... 64.3 2e-15
P23101 Ferredoxin / Ferredoxin--NAD(+) reductase [Pseudomonas put... 62.0 1e-14
Q3C1E0 Terephthalate 1,2-dioxygenase, reductase component 1 [Coma... 61.6 2e-14
Q3C1D2 Terephthalate 1,2-dioxygenase, reductase component 2 [Coma... 59.3 1e-13
P22868 Methane monooxygenase component C [Methylococcus capsulatu... 57.4 4e-13
>P28901 Flavodoxin/ferredoxin--NADP reductase [Shigella flexneri]
Length=248
Score = 173 bits (439), Expect = 3e-57
Identities = 101/247 (41%), Positives = 151/247 (61%), Gaps = 9/247 (4%)
Query 10 KVLSIHRWTPTLFSFTLTRPAHFKFSAGQFARIGLKVKDDLVVRAYSIVSSPFDETLEFF 69
KV + WT LFS T+ P F+AGQF ++GL++ + V RAYS V+SP + LEF+
Sbjct 8 KVTKVQNWTDALFSLTVHAPV-LPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFY 66
Query 70 SIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFISM 129
+ VPDG + L LK DE+ + GF L ++P + LW+LATGT + P++S+
Sbjct 67 LVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLD--EVPDCETLWMLATGTAIGPYLSI 124
Query 130 LQDFSTWENYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPVVTRDPHA-AL 188
LQ + ++++ LV++ R AA+L+Y+ +QE+ + EG + VV+R+ A +L
Sbjct 125 LQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRY-EG--KLRIQTVVSRETAAGSL 181
Query 189 HERLPVLIENGELEKAANHMLNPASSHVMLCGNPQMVEDTKEALK--RRGLSMNRRGEGN 246
R+P LIE+GELE A +N +SHVMLCGNPQMV DT++ LK R+ RR G+
Sbjct 182 TGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPGH 241
Query 247 IAVENYW 253
+ E+YW
Sbjct 242 MTAEHYW 248
>P28861 Flavodoxin/ferredoxin--NADP reductase [Escherichia coli
(strain K12)]
Length=248
Score = 172 bits (436), Expect = 1e-56
Identities = 100/247 (40%), Positives = 150/247 (61%), Gaps = 9/247 (4%)
Query 10 KVLSIHRWTPTLFSFTLTRPAHFKFSAGQFARIGLKVKDDLVVRAYSIVSSPFDETLEFF 69
KV + WT LFS T+ P F+AGQF ++GL++ + V RAYS V+SP + LEF+
Sbjct 8 KVTKVQNWTDALFSLTVHAPV-LPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFY 66
Query 70 SIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFISM 129
+ VPDG + L LK DE+ + GF L ++P + LW+LATGT + P++S+
Sbjct 67 LVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLD--EVPHCETLWMLATGTAIGPYLSI 124
Query 130 LQDFSTWENYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPVVTRDPHA-AL 188
LQ + ++++ LV++ R AA+L+Y+ +QE+ + EG + VV+R+ A +L
Sbjct 125 LQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRY-EG--KLRIQTVVSRETAAGSL 181
Query 189 HERLPVLIENGELEKAANHMLNPASSHVMLCGNPQMVEDTKEALK--RRGLSMNRRGEGN 246
R+P LIE+GELE +N +SHVMLCGNPQMV DT++ LK R+ RR G+
Sbjct 182 TGRIPALIESGELESTIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPGH 241
Query 247 IAVENYW 253
+ E+YW
Sbjct 242 MTAEHYW 248
>Q44532 Ferredoxin--NADP reductase [Azotobacter vinelandii]
Length=258
Score = 166 bits (419), Expect = 5e-54
Identities = 105/257 (41%), Positives = 152/257 (59%), Gaps = 14/257 (5%)
Query 3 IEKFSVEKVLSIHRWTPTLFSFTLTRPAHFKFSAGQFARIGLKVKDDLVVRAYSIVSSPF 62
+ +VE+VLS+H W TLFSF TR +F GQF IGL+V ++RAYSI S +
Sbjct 1 MSNLNVERVLSVHHWNDTLFSFKTTRNPSLRFENGQFVMIGLEVDGRPLMRAYSIASPNY 60
Query 63 DETLEFFSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGTG 122
+E LEFFSI V +G TS LQHLK DEL + + P G TL L + L++L+TGTG
Sbjct 61 EEHLEFFSIKVQNGPLTSRLQHLKEGDELMVSRKPTG--TLVTSDLLPGKHLYMLSTGTG 118
Query 123 LAPFISMLQDFSTWENYQHIYLVYSVRSAAELAYVEKIQE---IAANFGEGHRD-FKFIP 178
LAPF+S++QD +E ++ + L++ VR ELAY + I E + FGE ++ + P
Sbjct 119 LAPFMSLIQDPEVYERFEKVVLIHGVRQVNELAYQQFITEHLPQSEYFGEAVKEKLIYYP 178
Query 179 VVTRDPHAALHE--RLPVLIENGEL-EKAANHMLNPASSHVMLCGNPQMVEDTKEALKRR 235
VTR+ + H RL L+ +G+L E +NP M+CG+P M++++ E L
Sbjct 179 TVTRE---SFHNQGRLTDLMRSGKLFEDIGLPPINPQDDRAMICGSPSMLDESCEVLDGF 235
Query 236 GLSMN-RRGE-GNIAVE 250
GL ++ R GE G+ +E
Sbjct 236 GLKISPRMGEPGDYLIE 252
>Q9Z615 Flavodoxin/ferredoxin--NADP reductase [Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg)]
Length=257
Score = 156 bits (395), Expect = 2e-50
Identities = 92/255 (36%), Positives = 150/255 (59%), Gaps = 18/255 (7%)
Query 11 VLSIHRWTPTLFSFTLTRPAHFKFSAGQFARIGLK---------VKDDLVVRAYSIVSSP 61
VL +H+WT LFS L F AGQF ++ L VK + RAYS V++P
Sbjct 9 VLKVHKWTQNLFSLILNAEIA-PFQAGQFTKLALNEENINFSNNVKKKKIQRAYSFVNAP 67
Query 62 FDETLEFFSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGT 121
++ LE + + + +G ++ L +LK D L++++ +GF TL ++P + LW+ ATGT
Sbjct 68 SNKNLEIYIVRILNGKLSNLLYNLKSGDNLFIKEKSFGFFTLD--EIPNCKTLWMFATGT 125
Query 122 GLAPFISMLQDFSTWENYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPVVT 181
G+ P+ S+LQ++ +++I L+++VR EL Y+ ++++ ++ + K +V+
Sbjct 126 GIGPYCSILQEYKNINRFKNIILIHAVRYQNELTYLPLMKQLYKSY---NGKLKIETIVS 182
Query 182 RDP-HAALHERLPVLIENGELEKAANHMLNPASSHVMLCGNPQMVEDTKEAL-KRRGLSM 239
R+ H +L+ R+P+L++N LEK +N SHVMLCGNP MV+DT L K R +
Sbjct 183 REKNHNSLYGRIPLLLQNQILEKKIGLKINRNDSHVMLCGNPAMVKDTYLFLQKDRCMQK 242
Query 240 N-RRGEGNIAVENYW 253
N RR G+I +ENYW
Sbjct 243 NLRRKHGHITMENYW 257
>Q89A28 Flavodoxin/ferredoxin--NADP reductase [Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp)]
Length=249
Score = 152 bits (383), Expect = 9e-49
Identities = 85/247 (34%), Positives = 143/247 (58%), Gaps = 8/247 (3%)
Query 10 KVLSIHRWTPTLFSFTLTRPAHFKFSAGQFARIGLKVKDDLVV-RAYSIVSSPFDETLEF 68
K++ I +W LFS + P F+AGQF ++G + K+ ++ RAYS V++P ++ LEF
Sbjct 8 KIIKIKKWKNNLFSVIVNAPIS-PFTAGQFTKLGYQKKNGKIIQRAYSFVNAPHEKNLEF 66
Query 69 FSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFIS 128
+ +++ +G T+ L +L D + ++K YGF TL ++P + LW+ ATGTG+ P++S
Sbjct 67 YMVLIKNGQLTTKLYNLNNTDHIQIKKKSYGFFTL--NEIPTCKILWMFATGTGIGPYLS 124
Query 129 MLQDFSTWENYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPVVTRDPHAAL 188
ML+ E +Q I L+++VR +L Y +I + + + + + + + +L
Sbjct 125 MLKYQKNTEKFQKIVLIHAVRYRHDLTYFNEINNLKNIYNK--KLYTQFIISREKTNFSL 182
Query 189 HERLPVLIENGELEKAANHMLNPASSHVMLCGNPQMVEDTKEAL-KRRGLSMN-RRGEGN 246
R+P L++ ELEK N + +SHVMLCGNP MV+ T+ L + + + RR G
Sbjct 183 SGRIPQLLKTEELEKHINLFIENNTSHVMLCGNPDMVKQTQNFLINNKNMKKHLRRKPGQ 242
Query 247 IAVENYW 253
I+ ENYW
Sbjct 243 ISSENYW 249
>P57641 Flavodoxin/ferredoxin--NADP reductase [Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS)]
Length=252
Score = 149 bits (377), Expect = 7e-48
Identities = 89/250 (36%), Positives = 145/250 (58%), Gaps = 13/250 (5%)
Query 11 VLSIHRWTPTLFSFTLTRPAHFKFSAGQFARIGLKVKDDL----VVRAYSIVSSPFDETL 66
VL + +WT LFS L P F AGQF ++ L + L + RAYS V++P ++ L
Sbjct 9 VLMVKKWTKNLFSLILNAPIE-PFFAGQFNKLALYNSNPLNKNKIQRAYSYVNAPSEKNL 67
Query 67 EFFSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPF 126
E + + V +G ++ L +L D+++++K +GF + ++P + LW+ ATGTG+ P+
Sbjct 68 EIYIVRVLNGQLSNLLYNLHSGDKIFIKKKSFGFFIID--EIPDCEILWMFATGTGIGPY 125
Query 127 ISMLQDFSTWENYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPVVTRDPHA 186
S+LQ+ + HI L ++VR EL Y+ ++E+ + + + + +R+ H
Sbjct 126 CSILQEGKNINRFNHIILTHAVRYQNELTYLPLMKELRQKY---NGKLQIQTITSREKHK 182
Query 187 -ALHERLPVLIENGELEKAANHMLNPASSHVMLCGNPQMVEDTKEALK-RRGLSMN-RRG 243
+L+ R+P L+ N LEK +NP +SHVMLCGNP MV+DT LK R + + RR
Sbjct 183 NSLNGRIPFLLRNKILEKHVGFSINPQTSHVMLCGNPFMVKDTFLFLKNNRNMEKHLRRK 242
Query 244 EGNIAVENYW 253
+G+I +ENYW
Sbjct 243 KGHITMENYW 252
>Q9L6V3 Flavodoxin/ferredoxin--NADP reductase [Rhodobacter capsulatus]
Length=270
Score = 141 bits (356), Expect = 2e-44
Identities = 87/243 (36%), Positives = 128/243 (53%), Gaps = 11/243 (5%)
Query 9 EKVLSIHRWTPTLFSFTLTRPAHFKFSAGQFARIGLKVKDDL-VVRAYSIVSSPFDETLE 67
+ V S+ WT TLFSF +TRP +F +G+F IGL + ++RAYSI S +DE LE
Sbjct 17 QTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELE 76
Query 68 FFSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFI 127
F+SI VPDG TS LQH+K+ +++ L P G TL L + LW LATGTG+APF
Sbjct 77 FYSIKVPDGPLTSRLQHIKVGEQIILRPKPVG--TLVIDALLPGKRLWFLATGTGIAPFA 134
Query 128 SMLQDFSTWENYQHIYLVYSVRSAAELAY----VEKIQE--IAANFGEGHRDFKFIPVVT 181
S++++ +E + + ++++ R+ AEL Y VE +QE + EG K+ P T
Sbjct 135 SLMREPEAYEKFDEVIMMHACRTVAELEYGRQLVEALQEDPLIGELVEG--KLKYYPTTT 192
Query 182 RDPHAALHERLPVLIENGELEKAANHMLNPASSHVMLCGNPQMVEDTKEALKRRGLSMNR 241
R+ + L E +NP + M+CG+ D + L+ GL
Sbjct 193 REEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSLAFNVDVMKVLESYGLREGA 252
Query 242 RGE 244
E
Sbjct 253 NSE 255
>Q51603 Ferredoxin / Ferredoxin--NAD(+) reductase [Burkholderia
cepacia]
Length=339
Score = 67.0 bits (162), Expect = 2e-16
Identities = 64/233 (27%), Positives = 98/233 (42%), Gaps = 21/233 (9%)
Query 10 KVLSIHRWTPTLFSFTLTRPAHFK--FSAGQFARIGLKVKDDLVVRAYSIVSSPFDETLE 67
++ I R + + FTL K F GQ+A+ L++ RAYS S P +
Sbjct 109 QMTEIDRGSSSTLQFTLAIDPSSKVDFLPGQYAQ--LRIPGTTESRAYSYSSMPGSSHVT 166
Query 68 FFSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFI 127
F VP+G + L++ E + PYG L P+ +LA GTGLAPF+
Sbjct 167 FLVRDVPNGKMSGYLRNQATITETFTFDGPYGAFYLREPVRPI----LMLAGGTGLAPFL 222
Query 128 SMLQDFSTWE--NYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPVVTRDPH 185
SMLQ + + + + LVY V +L ++K+ E+A F +I V
Sbjct 223 SMLQYMAGLQRNDLPSVRLVYGVNRDDDLVGLDKLDELATQLS----GFSYITTVVDKDS 278
Query 186 AALHERLPVLIENGELEKAANHMLNPASSHVMLCGNPQMVEDTKEALKRRGLS 238
A L ++ N +N + +CG P MVE + L L+
Sbjct 279 AQLRRGYVT-------QQITNDDMNGGDVDIYVCGPPPMVEAVRSWLAAEKLN 324
>O85675 Ferredoxin / Ferredoxin--NAD(+) reductase [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=343
Score = 64.3 bits (155), Expect = 2e-15
Identities = 51/212 (24%), Positives = 95/212 (45%), Gaps = 29/212 (14%)
Query 34 FSAGQFARIGLKVKDDLVVRAYSIVSSP-FDETLEFFSIVVPDGAFTSNLQHLKIDDELY 92
F GQ+AR+ + DD R+YS + P L+F ++P+G ++ L+ +
Sbjct 137 FLPGQYARLQIPDTDDW--RSYSFANRPNASNQLQFLIRLLPNGVMSNYLRERCQVGQTL 194
Query 93 LEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFISMLQDFSTWENYQHIYLVYSVRSAA 152
+ + P G L + PL +A GTGL+ F+ ML + + N ++L Y V + A
Sbjct 195 IMEAPLGSFYLREVERPLV----FIAGGTGLSAFLGMLDNIAEQPNQPSVHLYYGVNTEA 250
Query 153 ELAYVEKIQEIAANFGEGHRDFKFIPVVTR------DPHAALHERLPVLIENGELEKAAN 206
+L +++ + E ++F + P++++ +HE L
Sbjct 251 DLCEQKRL----TTYAERIKNFSYHPIISKASEQWQGKSGFIHEHLD------------K 294
Query 207 HMLNPASSHVMLCGNPQMVEDTKEALKRRGLS 238
+ L+ S + LCG P M+E K L + ++
Sbjct 295 NQLSEQSFDMYLCGPPPMIEAVKTWLDEQAIA 326
>P23101 Ferredoxin / Ferredoxin--NAD(+) reductase [Pseudomonas
putida]
Length=336
Score = 62.0 bits (149), Expect = 1e-14
Identities = 59/205 (29%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query 34 FSAGQFARIGLKVKDDLVVRAYSIVSSPFDETLEFFSIVVPDGAFTSNLQHL-KIDDELY 92
F GQ+ + L+V RAYS S D + F +P G +S L L K+ D +
Sbjct 136 FLPGQY--VNLQVPGSDQTRAYSFSSLQKDGEVSFLIRKLPGGLMSSFLTSLAKVGDSVS 193
Query 93 LEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFISMLQDFSTWENYQHIYLVYSVRSAA 152
L P G L + PL LLA GTGLAPF +ML+ + ++L+Y V
Sbjct 194 LAG-PLGAFYLREIKRPL----LLLAGGTGLAPFTAMLEKIAEQGGEHPLHLIYGVTHDH 248
Query 153 ELAYVEKIQEIAANFGEGHRDFKFIPVVTRDPHAALHERLPVLIENGELEKAANHMLNPA 212
+L ++K++ AA +F + V P +A ++ V + LN
Sbjct 249 DLVEMDKLEAFAARI----PNFSYSACVA-SPDSAYPQKGYV------TQYIEPKQLNGG 297
Query 213 SSHVMLCGNPQMVEDTKEALKRRGL 237
+ LCG P MVE + ++ +G+
Sbjct 298 EVDIYLCGPPPMVEAVSQYIRAQGI 322
>Q3C1E0 Terephthalate 1,2-dioxygenase, reductase component 1 [Comamonas
sp]
Length=336
Score = 61.6 bits (148), Expect = 2e-14
Identities = 64/239 (27%), Positives = 104/239 (44%), Gaps = 37/239 (15%)
Query 16 RWTPTLFSFTLTRP------------AHFKFSAGQFARIGLKVKDDLVVRAYSIVSSPFD 63
R+T ++S TL P KF AGQ+ I L DD R+YS+ + P +
Sbjct 100 RFTAKVYSNTLAAPDVSLLRLRLPVGKRAKFEAGQYLLIHL---DDGESRSYSMANPPHE 156
Query 64 -ETLEFFSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQD---LWLLAT 119
+ + VP G F++ +Q LK D L +E +P+G + L P D L +A
Sbjct 157 SDGITLHVRHVPGGRFSTIVQQLKSGDTLEIE-LPFGSIALK------PDDTRPLICVAG 209
Query 120 GTGLAPFISMLQDFSTWENYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPV 179
GTG AP S+L D + + + I L++ R+ + L I + + + F++I
Sbjct 210 GTGFAPIKSVLDDLAKRKVQRDITLIWGARNPSGLYLPSAIDKWRKTWPQ----FRYIAA 265
Query 180 VTRDPHAALHERLPVLIENGELEKAANHMLNPASSHVM-LCGNPQMVEDTKEALKRRGL 237
+T +P G ++ A HV+ CG+P +V+ + A GL
Sbjct 266 ITD------LGNVPADAHAGRVDDALRTHFGNLHDHVVHCCGSPSLVQSVRTAASDMGL 318
>Q3C1D2 Terephthalate 1,2-dioxygenase, reductase component 2 [Comamonas
sp]
Length=336
Score = 59.3 bits (142), Expect = 1e-13
Identities = 64/239 (27%), Positives = 104/239 (44%), Gaps = 37/239 (15%)
Query 16 RWTPTLFSFTLTRP------------AHFKFSAGQFARIGLKVKDDLVVRAYSIVSSPFD 63
R+T ++S TL P KF AGQ+ I L DD R+YS+ + P +
Sbjct 100 RFTAKVYSNTLAAPDVSLLRLRLPVGKRAKFEAGQYLLIHL---DDGESRSYSMANPPHE 156
Query 64 -ETLEFFSIVVPDGAFTSNLQHLKIDDELYLEKIPYGFLTLARYQLPLPQD---LWLLAT 119
+ + VP G F++ +Q LK D L +E +P+G + L P D L +A
Sbjct 157 SDGITLHVRHVPGGRFSTIVQQLKSGDTLDIE-LPFGSIALK------PDDARPLICVAG 209
Query 120 GTGLAPFISMLQDFSTWENYQHIYLVYSVRSAAELAYVEKIQEIAANFGEGHRDFKFIPV 179
GTG AP S+L D + + + I L++ R+ + L I + + + F++I
Sbjct 210 GTGFAPIKSVLDDLAKRKVQRDITLIWGARNPSGLYLPSAIDK----WRKVWPQFRYIAA 265
Query 180 VTRDPHAALHERLPVLIENGELEKAANHMLNPASSHVM-LCGNPQMVEDTKEALKRRGL 237
+T +P G ++ A HV+ CG+P +V+ + A GL
Sbjct 266 ITD------LGDMPADAHAGRVDDALRTHFGNLHDHVVHCCGSPALVQSVRTAASDMGL 318
>P22868 Methane monooxygenase component C [Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath)]
Length=348
Score = 57.4 bits (137), Expect = 4e-13
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 23/210 (11%)
Query 33 KFSAGQFARIGLKVKDDLVVRAYSIVSSPFDE-TLEFFSIVVPDGAFTSNLQHLKIDDEL 91
KF GQF + + D V R+YS + P E LEF V+P+G F+ L++ ++
Sbjct 141 KFEPGQFMDLTIPGTD--VSRSYSPANLPNPEGRLEFLIRVLPEGRFSDYLRNDARVGQV 198
Query 92 YLEKIPYGFLTLARYQLPLPQDLWLLATGTGLAPFISMLQDFSTWENYQHIYLVYSVRSA 151
K P G L + + +A GTGLAP +SM++ W + + V +
Sbjct 199 LSVKGPLGVFGLKERGMA---PRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVNTE 255
Query 152 AELAYVEKIQEIAANFGEGHRDFKFIPVVTRDPHAA----LHERLPVLIENGELEKAANH 207
EL Y+++++ + R + + V H + + P+ +LE
Sbjct 256 PELFYIDELKSL-------ERSMRNLTVKACVWHPSGDWEGEQGSPIDALREDLES---- 304
Query 208 MLNPASSHVMLCGNPQMVEDTKEALKRRGL 237
+ A+ + LCG P M++ E ++ RG+
Sbjct 305 --SDANPDIYLCGPPGMIDAACELVRSRGI 332
Lambda K H a alpha
0.324 0.138 0.419 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 694088
Database: c0f47b4ca8772236ddcfc0a9c2c20366.SwissProt.fasta
Posted date: May 9, 2024 12:03 PM
Number of letters in database: 3,820
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
