BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 861ef6c6f2ce95df1728b5b6f86938d6.TrEMBL.fasta
9 sequences; 2,280 total letters
Query= ACIAD0781
Length=243
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SE05 DUF4882 domain-containing protein [Acinetobacter sp] 488 0.0
Q6FE24 DUF4882 domain-containing protein [Acinetobacter baylyi (s... 488 0.0
A0A2U3MYH4 DUF4882 domain-containing protein [Acinetobacter sterc... 126 4e-39
A0A072D4I2 DUF4882 domain-containing protein [Acinetobacter sp. E... 120 7e-37
N8WYN1 DUF4882 domain-containing protein [Acinetobacter guillouia... 120 7e-37
A0A6A1RM13 DUF4882 domain-containing protein [Acinetobacter guill... 119 1e-36
A0A3S9AVC5 DUF4882 domain-containing protein [Acinetobacter haemo... 118 4e-36
N8YAF1 DUF4882 domain-containing protein [Acinetobacter gerneri D... 118 5e-36
A0A6A8B9J4 DUF4882 domain-containing protein [Acinetobacter haemo... 117 7e-36
>A0A7G2SE05 DUF4882 domain-containing protein [Acinetobacter sp]
Length=242
Score = 488 bits (1256), Expect = 0.0
Identities = 242/242 (100%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 1 MKIKMALSLFLLAIIQNSFAAECSYDFNVNTYPVVSGKQYKFTTLSSNEAKEYGALRTLD 60
MKIKMALSLFLLAIIQNSFAAECSYDFNVNTYPVVSGKQYKFTTLSSNEAKEYGALRTLD
Sbjct 1 MKIKMALSLFLLAIIQNSFAAECSYDFNVNTYPVVSGKQYKFTTLSSNEAKEYGALRTLD 60
Query 61 GGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLLIYSILLKSNDSDYRIMVYYPN 120
GGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLLIYSILLKSNDSDYRIMVYYPN
Sbjct 61 GGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLLIYSILLKSNDSDYRIMVYYPN 120
Query 121 NSFYEDHKRTLIINMIKITNDVYSTIFKRSYQYSGLNQKLGFYFNQNTNQIGLIINGINQ 180
NSFYEDHKRTLIINMIKITNDVYSTIFKRSYQYSGLNQKLGFYFNQNTNQIGLIINGINQ
Sbjct 121 NSFYEDHKRTLIINMIKITNDVYSTIFKRSYQYSGLNQKLGFYFNQNTNQIGLIINGINQ 180
Query 181 GYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQLSSGYPVGTKDICGN 240
GYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQLSSGYPVGTKDICGN
Sbjct 181 GYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQLSSGYPVGTKDICGN 240
Query 241 PL 242
PL
Sbjct 241 PL 242
>Q6FE24 DUF4882 domain-containing protein [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=242
Score = 488 bits (1256), Expect = 0.0
Identities = 242/242 (100%), Positives = 242/242 (100%), Gaps = 0/242 (0%)
Query 1 MKIKMALSLFLLAIIQNSFAAECSYDFNVNTYPVVSGKQYKFTTLSSNEAKEYGALRTLD 60
MKIKMALSLFLLAIIQNSFAAECSYDFNVNTYPVVSGKQYKFTTLSSNEAKEYGALRTLD
Sbjct 1 MKIKMALSLFLLAIIQNSFAAECSYDFNVNTYPVVSGKQYKFTTLSSNEAKEYGALRTLD 60
Query 61 GGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLLIYSILLKSNDSDYRIMVYYPN 120
GGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLLIYSILLKSNDSDYRIMVYYPN
Sbjct 61 GGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLLIYSILLKSNDSDYRIMVYYPN 120
Query 121 NSFYEDHKRTLIINMIKITNDVYSTIFKRSYQYSGLNQKLGFYFNQNTNQIGLIINGINQ 180
NSFYEDHKRTLIINMIKITNDVYSTIFKRSYQYSGLNQKLGFYFNQNTNQIGLIINGINQ
Sbjct 121 NSFYEDHKRTLIINMIKITNDVYSTIFKRSYQYSGLNQKLGFYFNQNTNQIGLIINGINQ 180
Query 181 GYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQLSSGYPVGTKDICGN 240
GYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQLSSGYPVGTKDICGN
Sbjct 181 GYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQLSSGYPVGTKDICGN 240
Query 241 PL 242
PL
Sbjct 241 PL 242
>A0A2U3MYH4 DUF4882 domain-containing protein [Acinetobacter stercoris]
Length=258
Score = 126 bits (316), Expect = 4e-39
Identities = 89/254 (35%), Positives = 133/254 (52%), Gaps = 22/254 (9%)
Query 7 LSLFLLAIIQNSFAAECSYDFNVNTY----------PVVSGKQYKFTTLSSNEAKEYGAL 56
LSL +I N +A C+YD + Y PVVS ++ + TLSS +A +Y A
Sbjct 7 LSLLFSCLIGNVYAV-CNYDLDGFLYDPNNPSSQKFPVVSNQKLSYKTLSSLQAIQYSAN 65
Query 57 RTLDGGLNNNFIYKG---LPESGIYSFELKSEVISYDLPDNEAVLLIYSILLK-SNDSDY 112
+ + NN I KG +P SG+ FEL +EV +L + Y IL+ +N++ +
Sbjct 66 HS-SLEMENNSISKGALSMPLSGVVGFELNTEVFPIELKGQNMDVKNYGILIPDTNNNTH 124
Query 113 RIMVYYPNNSF--YEDHKRTLIINMIKITND---VYSTIFKRSYQYSGLN-QKLGFYFNQ 166
I+V Y NNS Y+D K+ ++ +I + +I+ G++ Q + YFNQ
Sbjct 125 MILVTYANNSSLTYKDDKKNVVFILISSVHPDTKQNESIYGYGIPIEGVSKQNIAIYFNQ 184
Query 167 NTNQIGLIINGINQGYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQL 226
NTNQ+GLI+N N GYVA + K I F F F NS L + +S E + D S+
Sbjct 185 NTNQVGLIVNKNNLGYVATLFSKPKAITFVPQAFFGGFEKNSQYLNQNMSLELVTDKSKF 244
Query 227 SSGYPVGTKDICGN 240
++ +P GTKDICG+
Sbjct 245 TNAFPNGTKDICGS 258
>A0A072D4I2 DUF4882 domain-containing protein [Acinetobacter sp.
ETR1]
Length=259
Score = 120 bits (301), Expect = 7e-37
Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 20/258 (8%)
Query 2 KIKMALSLFLLAIIQNSFAAECSYDFN----------VNTYPVVSGKQYKFTTLSSNEAK 51
K+K+A+ L L I FA C YD +P VSG++ + L++
Sbjct 3 KLKLAVLLSLSVISTQGFAL-CRYDLEGFLSDPYNLVAQKFPTVSGQKVSYKILNTTSPI 61
Query 52 EYGALRTLDGGLNNNFIYKGL--PESGIYSFELKSEVISYDLPDNEAVLLIYSILLKSND 109
Y A + NN GL P+ G+ EL +E+I +L ++ Y I + D
Sbjct 62 TYSANHSTLKMTNNTITEGGLTLPQLGVIGLELNTEIIPTELTNDRKETKNYGIFAQDKD 121
Query 110 SD-YRIMVYYPNNSFY--EDHKRTLIINMIKITND---VYSTIFKRSYQYSGL-NQKLGF 162
+ + I + Y NN+ +D+K+ ++ +I T+ T++ G+ Q LG
Sbjct 122 KNMHSIFITYANNTALSSQDNKKNVVFILIASTHPDTKQTETLYGYGIPIEGIPQQNLGV 181
Query 163 YFNQNTNQIGLIINGINQGYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFD 222
YFNQNTNQIGLI+N N GYVA + K F F ANS L K +S E + D
Sbjct 182 YFNQNTNQIGLIVNKNNLGYVATLLSKPKDFTVAPQVNFEGFEANSPYLNKTMSLELVTD 241
Query 223 HSQLSSGYPVGTKDICGN 240
S+ ++ +P+GTKD CGN
Sbjct 242 KSKFTNTFPIGTKDACGN 259
>N8WYN1 DUF4882 domain-containing protein [Acinetobacter guillouiae
NIPH 991]
Length=259
Score = 120 bits (301), Expect = 7e-37
Identities = 84/259 (32%), Positives = 126/259 (49%), Gaps = 22/259 (8%)
Query 2 KIKMALSLFLLAIIQNSFAAECSYDFN----------VNTYPVVSGKQYKFTTLSSNEAK 51
K+K+A+ L L I FA C YD +P SG++ + L++
Sbjct 3 KLKLAVLLSLSIISTQGFAL-CRYDLEGFLPEPANPAAQKFPTASGQKLSYKILNTTNQL 61
Query 52 EYGALRTLDGGLNNNFIYKGL--PESGIYSFELKSEVISYDLPDNEAVLLIYSILLKS-N 108
Y A + +N+ I GL P+SGI FEL ++VI L + + + ILL+ N
Sbjct 62 VYSANHSSLKMMNDAIIEGGLTLPQSGIVGFELNTDVIPTQLTNTRSDAKSFGILLQDKN 121
Query 109 DSDYRIMVYYPNNSFY--EDHKRTLIINMIKITNDVYSTIFKRSYQYSG-----LNQKLG 161
+ + I+V Y N+S +D+ + +++ ++ T+ + K Y Y Q +G
Sbjct 122 KNVHSILVIYNNSSSLTDQDNLKNMVLILVMSTDPDTKEV-KGLYSYIKPIERVSQQNIG 180
Query 162 FYFNQNTNQIGLIINGINQGYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIF 221
Y NQN+ QIGLI+N N GY+A + K F F ANS L K +S EF+
Sbjct 181 IYLNQNSTQIGLIVNKNNLGYIATLLSKPKDFSIVSEAAFAGFEANSPYLNKTMSLEFVT 240
Query 222 DHSQLSSGYPVGTKDICGN 240
D S+ + YP GTKDICGN
Sbjct 241 DKSKFKNTYPTGTKDICGN 259
>A0A6A1RM13 DUF4882 domain-containing protein [Acinetobacter guillouiae]
Length=259
Score = 119 bits (299), Expect = 1e-36
Identities = 84/260 (32%), Positives = 129/260 (50%), Gaps = 24/260 (9%)
Query 2 KIKMALSLFLLAIIQNSFAAECSYDFN----------VNTYPVVSGKQYKFTTLSSNEAK 51
K+K+A+ L L I FA C YD +P VSG++ + L++
Sbjct 3 KLKLAVLLSLSVISTQGFAL-CRYDLEGFLSDQYNPVAQKFPTVSGQKVSYKILNTTSPI 61
Query 52 EYGALR-TLDGGLNNNFIYKG---LPESGIYSFELKSEVISYDLPDNEAVLLIYSILLKS 107
Y A TL+ + NN I +G LP+SG+ E +E+I +L ++ Y I ++
Sbjct 62 TYSANHSTLE--MTNNTITEGGLTLPQSGVIGLEFNTEIIPTELTNDRKETKNYGIFVQD 119
Query 108 NDSD-YRIMVYYPNNSFY--EDHKRTLIINMIKITND---VYSTIFKRSYQYSGL-NQKL 160
D + + I + Y NN+ +++K+ ++ +I T+ T++ G+ Q +
Sbjct 120 KDKNMHSIFITYANNTALSSQENKKNVVFILIASTHPDTKQTETLYGYGIPIEGMPQQNI 179
Query 161 GFYFNQNTNQIGLIINGINQGYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFI 220
G YFNQNTNQIGLI+N N GYVA + K F F ANS L K +S E +
Sbjct 180 GVYFNQNTNQIGLIVNKNNLGYVATLLSKPKDFTVAPQVNFEGFEANSPYLNKTMSLELV 239
Query 221 FDHSQLSSGYPVGTKDICGN 240
D S+ ++ +P GTKD CGN
Sbjct 240 TDKSKFTNTFPTGTKDACGN 259
>A0A3S9AVC5 DUF4882 domain-containing protein [Acinetobacter haemolyticus]
Length=254
Score = 118 bits (296), Expect = 4e-36
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 31/261 (12%)
Query 4 KMALSLFLLAIIQNSFAAECSYDFNVNT------------YPVVSGKQYKFTTLSSNEAK 51
K+ L + I S A C+Y+F+ +PVV+ ++ F ++ N+ K
Sbjct 3 KIILGPLISVITMGSSFAACTYNFDATAAQIAQFDSSAARFPVVNNQKVAFNVIAENDVK 62
Query 52 EYGALRT------LDGGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLL--IYSI 103
Y AL + + GG + + +P SGI+++E K +V +Y L +EA+L + +
Sbjct 63 AYTALSSDYIATRIAGGDDGDI---AIPTSGIFAYEYKIKVPTYLLNGDEALLFAPLGAF 119
Query 104 LLKSNDSDYRIMVYYPNNSFYEDHKRT--LIINMIKITNDVYSTIFKRSYQYSGLNQKLG 161
+N + I + Y NN+ +K L +NM + D+ YQ +G
Sbjct 120 GTLNNQNTQSITLTYWNNTSTNPNKNEFKLFMNMTGNSFDMPVVATPSGYQ------TIG 173
Query 162 FYFNQNTNQIGLIINGINQGYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIF 221
Y N +T ++G+I NG+N+GYVA I N++ F G FA NSSNLG+ +S E I
Sbjct 174 IYVNMDTRKVGVIYNGVNKGYVAPITQPFNRLAFANLAGQYNFANNSSNLGQEISIELIT 233
Query 222 DHSQLSSGYPVGTKDICGNPL 242
D ++L + YP GTKD+CG L
Sbjct 234 DSTKLQNTYPQGTKDVCGTTL 254
>N8YAF1 DUF4882 domain-containing protein [Acinetobacter gerneri
DSM 14967 = CIP 107464 = MTCC 9824]
Length=253
Score = 118 bits (295), Expect = 5e-36
Identities = 81/254 (32%), Positives = 125/254 (49%), Gaps = 20/254 (8%)
Query 4 KMALSLFLLAIIQNSFAAECSYDFN----------VNTYPVVSGKQYKFTTLSSNEAKEY 53
K+ L+ L I N ++A C+YD +P V G++ + ++S + Y
Sbjct 3 KVLLATLLSCTIGNVYSA-CNYDLEGFINDPENPTAQKFPTVIGQKVTYKIINSPKDITY 61
Query 54 GALRTLDGGLNNNFIYKGL---PESGIYSFELKSEVISYDLPDNEAVLLIYSIL-LKSND 109
A + NNN GL +GI FEL+ + IS +L + + ++I+ L +N+
Sbjct 62 SANHSAYN--NNNGTLTGLLPTSNNGIVGFELRVDTISEELKETNTDVKTFNIVGLGANN 119
Query 110 SDYRIMVYYPNNSFYEDHKRTLIINMIKITNDVYSTIFKRSYQY---SGLNQKLGFYFNQ 166
I + NNS +++K+ L+I +I+ + SY S Q +G Y NQ
Sbjct 120 DPIGITAIFANNSDIQNYKKPLLIWVIQKNSSTNENEITYSYLQPYDSTPTQNIGIYLNQ 179
Query 167 NTNQIGLIINGINQGYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIFDHSQL 226
NTNQ+GLI+N N GYV ++ KL I F F ANS L K +S E + D S+
Sbjct 180 NTNQLGLIVNKKNLGYVTSLKSKLKSITFQPQAFIKGFEANSQYLNKTMSMELVTDKSKF 239
Query 227 SSGYPVGTKDICGN 240
++ +P GT DICGN
Sbjct 240 TNAFPTGTTDICGN 253
>A0A6A8B9J4 DUF4882 domain-containing protein [Acinetobacter haemolyticus]
Length=254
Score = 117 bits (294), Expect = 7e-36
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 31/261 (12%)
Query 4 KMALSLFLLAIIQNSFAAECSYDFNVNT------------YPVVSGKQYKFTTLSSNEAK 51
K+ L + I S A C+Y+F+ +PVV+ ++ F ++ N+ K
Sbjct 3 KIILGPLISVITMGSSFAACTYNFDATAAQIAQFDSSAARFPVVNNQKVAFNVIAENDVK 62
Query 52 EYGALRT------LDGGLNNNFIYKGLPESGIYSFELKSEVISYDLPDNEAVLL--IYSI 103
Y AL + + GG + + +P SGI+++E K +V +Y L +EA+L + +
Sbjct 63 AYIALSSDYIATRIAGGDDGDI---AIPTSGIFAYEYKIKVPTYLLNGDEALLFAPLGAF 119
Query 104 LLKSNDSDYRIMVYYPNNSFYEDHKRT--LIINMIKITNDVYSTIFKRSYQYSGLNQKLG 161
+N + I + Y NN+ +K L +NM + D+ YQ +G
Sbjct 120 GTLNNQNTQSITLTYWNNTSTNPNKNEFKLFMNMTGNSFDMPVVATPSGYQ------TIG 173
Query 162 FYFNQNTNQIGLIINGINQGYVANINDKLNQIGFFMSGGFPPFAANSSNLGKVLSQEFIF 221
Y N +T ++G+I NG+N+GYVA I N++ F G FA NSSNLG+ +S E I
Sbjct 174 IYVNMDTRKVGVIYNGVNKGYVAPITQPFNRLAFANLAGQYNFANNSSNLGQEISIELIT 233
Query 222 DHSQLSSGYPVGTKDICGNPL 242
D ++L + YP GTKD+CG L
Sbjct 234 DSTKLQNTYPQGTKDVCGTTL 254
Lambda K H a alpha
0.321 0.139 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 397290
Database: 861ef6c6f2ce95df1728b5b6f86938d6.TrEMBL.fasta
Posted date: May 20, 2024 3:03 AM
Number of letters in database: 2,280
Number of sequences in database: 9
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
