BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d55bfeb1829a89050d7127860cd90db4.SwissProt.fasta
17 sequences; 3,986 total letters
Query= ACIAD0787
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
P43501 Protein PilH [Pseudomonas aeruginosa (strain ATCC 15692 / ... 166 5e-58
B8GZM2 Diguanylate cyclase [Caulobacter vibrioides (strain NA1000... 89.7 1e-25
Q9A5I5 Diguanylate cyclase [Caulobacter vibrioides (strain ATCC 1... 89.7 1e-25
A6X580 Polar-differentiation response regulator DivK [Brucella an... 82.8 5e-25
A9WYT1 Polar-differentiation response regulator DivK [Brucella su... 81.6 1e-24
A5VUU3 Polar-differentiation response regulator DivK [Brucella ov... 81.6 1e-24
Q8YC73 Polar-differentiation response regulator DivK [Brucella me... 81.6 1e-24
A9MBQ2 Polar-differentiation response regulator DivK [Brucella ca... 81.6 1e-24
Q7BBW0 Polar-differentiation response regulator DivK [Brucella ab... 81.6 1e-24
Q04942 Transcriptional regulatory protein AfsQ1 [Streptomyces coe... 77.4 5e-22
P13792 Alkaline phosphatase synthesis transcriptional regulatory ... 75.5 4e-21
Q9F8D7 Sensor histidine kinase GacS [Pseudomonas protegens (strai... 77.0 5e-21
Q1XDE4 Probable transcriptional regulator ycf29 [Neopyropia yezoe... 74.7 5e-21
Q56312 Chemotaxis protein CheY [Thermotoga maritima (strain ATCC ... 72.0 7e-21
P46384 Protein PilG [Pseudomonas aeruginosa (strain ATCC 15692 / ... 72.4 7e-21
P51586 Uncharacterized 14.6 kDa protein in sodA1 3'region [Leptol... 71.6 1e-20
P23620 Phosphate regulon transcriptional regulatory protein PhoB ... 73.6 2e-20
>P43501 Protein PilH [Pseudomonas aeruginosa (strain ATCC 15692
/ DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS
101 / PAO1)]
Length=121
Score = 166 bits (420), Expect = 5e-58
Identities = 76/115 (66%), Positives = 97/115 (84%), Gaps = 0/115 (0%)
Query 1 MARILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNG 60
MARILIVDDSPTE Y+ +L +HG+QVL+A NG DGV LA+ E+PD+VLMD+VMPG+NG
Sbjct 1 MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNG 60
Query 61 FQATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVI 115
FQATRQ+ + +T IPV+IV+TKDQ TD++WGKRQGAR+YLTKP+DE L++ I
Sbjct 61 FQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTI 115
>B8GZM2 Diguanylate cyclase [Caulobacter vibrioides (strain NA1000
/ CB15N)]
Length=454
Score = 89.7 bits (221), Expect = 1e-25
Identities = 45/110 (41%), Positives = 66/110 (60%), Gaps = 0/110 (0%)
Query 2 ARILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGF 61
ARIL+VDD LT Y+V A +G + +A + PD++L+DV+MPG++GF
Sbjct 3 ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGF 62
Query 62 QATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQL 111
R++ T+HIPVV+++ D DRI G GA ++LTKPID+ L
Sbjct 63 TVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVML 112
Score = 39.7 bits (91), Expect = 5e-08
Identities = 26/109 (24%), Positives = 50/109 (46%), Gaps = 2/109 (2%)
Query 3 RILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQ 62
R+LIVDD+ + R L V+E+ + ++ DLV+++ +G +
Sbjct 155 RVLIVDDNERQAQRVAAELGVEHRPVIESD--PEKAKISAGGPVDLVIVNAAAKNFDGLR 212
Query 63 ATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQL 111
T + E+T+ +PV+ + D + G + L++PID +L
Sbjct 213 FTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQEL 261
>Q9A5I5 Diguanylate cyclase [Caulobacter vibrioides (strain ATCC
19089 / CB15)]
Length=454
Score = 89.7 bits (221), Expect = 1e-25
Identities = 45/110 (41%), Positives = 66/110 (60%), Gaps = 0/110 (0%)
Query 2 ARILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGF 61
ARIL+VDD LT Y+V A +G + +A + PD++L+DV+MPG++GF
Sbjct 3 ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGF 62
Query 62 QATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQL 111
R++ T+HIPVV+++ D DRI G GA ++LTKPID+ L
Sbjct 63 TVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVML 112
Score = 39.7 bits (91), Expect = 5e-08
Identities = 26/109 (24%), Positives = 50/109 (46%), Gaps = 2/109 (2%)
Query 3 RILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQ 62
R+LIVDD+ + R L V+E+ + ++ DLV+++ +G +
Sbjct 155 RVLIVDDNERQAQRVAAELGVEHRPVIESD--PEKAKISAGGPVDLVIVNAAAKNFDGLR 212
Query 63 ATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQL 111
T + E+T+ +PV+ + D + G + L++PID +L
Sbjct 213 FTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQEL 261
>A6X580 Polar-differentiation response regulator DivK [Brucella
anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM
21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)]
Length=123
Score = 82.8 bits (203), Expect = 5e-25
Identities = 37/116 (32%), Positives = 68/116 (59%), Gaps = 0/116 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
++IV+D+ FRD++ GY+ + NG + + LA+ +PDL+LMD+ +P V+G +
Sbjct 5 VMIVEDNELNMKLFRDLIEASGYETIRTRNGLEALDLAREHRPDLILMDIQLPEVSGLEV 64
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYI 119
T+ + ++ +HIPV+ V+ D ++ G Y++KPI + IE I+ Y+
Sbjct 65 TKWLKDDDELRHIPVIAVTAFAMKGDEERIRQGGCEAYISKPISVPRFIETIKSYL 120
>A9WYT1 Polar-differentiation response regulator DivK [Brucella
suis (strain ATCC 23445 / NCTC 10510)]
Length=123
Score = 81.6 bits (200), Expect = 1e-24
Identities = 37/116 (32%), Positives = 67/116 (58%), Gaps = 0/116 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
++IV+D+ FRD++ GY+ + +G + + LA+ PDL+LMD+ +P V+G +
Sbjct 5 VMIVEDNELNMKLFRDLIEASGYETIRTRSGLEALDLAREHHPDLILMDIQLPEVSGLEV 64
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYI 119
T+ + E+ +HIPV+ V+ D ++ G Y++KPI + IE I+ Y+
Sbjct 65 TKWLKDDEELRHIPVIAVTAFAMKGDEERIRQGGCEAYISKPISVPRFIETIKSYL 120
>A5VUU3 Polar-differentiation response regulator DivK [Brucella
ovis (strain ATCC 25840 / 63/290 / NCTC 10512)]
Length=123
Score = 81.6 bits (200), Expect = 1e-24
Identities = 37/116 (32%), Positives = 67/116 (58%), Gaps = 0/116 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
++IV+D+ FRD++ GY+ + +G + + LA+ PDL+LMD+ +P V+G +
Sbjct 5 VMIVEDNELNMKLFRDLIEASGYETIRTRSGLEALDLAREHHPDLILMDIQLPEVSGLEV 64
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYI 119
T+ + E+ +HIPV+ V+ D ++ G Y++KPI + IE I+ Y+
Sbjct 65 TKWLKDDEELRHIPVIAVTAFAMKGDEERIRQGGCEAYISKPISVPRFIETIKSYL 120
>Q8YC73 Polar-differentiation response regulator DivK [Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=123
Score = 81.6 bits (200), Expect = 1e-24
Identities = 37/116 (32%), Positives = 67/116 (58%), Gaps = 0/116 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
++IV+D+ FRD++ GY+ + +G + + LA+ PDL+LMD+ +P V+G +
Sbjct 5 VMIVEDNELNMKLFRDLIEASGYETIRTRSGLEALDLAREHHPDLILMDIQLPEVSGLEV 64
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYI 119
T+ + E+ +HIPV+ V+ D ++ G Y++KPI + IE I+ Y+
Sbjct 65 TKWLKDDEELRHIPVIAVTAFAMKGDEERIRQGGCEAYISKPISVPRFIETIKSYL 120
>A9MBQ2 Polar-differentiation response regulator DivK [Brucella
canis (strain ATCC 23365 / NCTC 10854)]
Length=123
Score = 81.6 bits (200), Expect = 1e-24
Identities = 37/116 (32%), Positives = 67/116 (58%), Gaps = 0/116 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
++IV+D+ FRD++ GY+ + +G + + LA+ PDL+LMD+ +P V+G +
Sbjct 5 VMIVEDNELNMKLFRDLIEASGYETIRTRSGLEALDLAREHHPDLILMDIQLPEVSGLEV 64
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYI 119
T+ + E+ +HIPV+ V+ D ++ G Y++KPI + IE I+ Y+
Sbjct 65 TKWLKDDEELRHIPVIAVTAFAMKGDEERIRQGGCEAYISKPISVPRFIETIKSYL 120
>Q7BBW0 Polar-differentiation response regulator DivK [Brucella
abortus biovar 1 (strain 9-941)]
Length=123
Score = 81.6 bits (200), Expect = 1e-24
Identities = 37/116 (32%), Positives = 67/116 (58%), Gaps = 0/116 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
++IV+D+ FRD++ GY+ + +G + + LA+ PDL+LMD+ +P V+G +
Sbjct 5 VMIVEDNELNMKLFRDLIEASGYETIRTRSGLEALDLAREHHPDLILMDIQLPEVSGLEV 64
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYI 119
T+ + E+ +HIPV+ V+ D ++ G Y++KPI + IE I+ Y+
Sbjct 65 TKWLKDDEELRHIPVIAVTAFAMKGDEERIRQGGCEAYISKPISVPRFIETIKSYL 120
>Q04942 Transcriptional regulatory protein AfsQ1 [Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145)]
Length=225
Score = 77.4 bits (189), Expect = 5e-22
Identities = 34/106 (32%), Positives = 67/106 (63%), Gaps = 3/106 (3%)
Query 1 MARILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNG 60
M +L+++D LTR G++V A +G DG+ L + ++PDL+++DV++PG++G
Sbjct 1 MPSLLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLREQRPDLIVLDVMLPGIDG 60
Query 61 FQATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPI 106
F+ R+I R +Q +P+++++ ++ D + G GA +Y+ KP+
Sbjct 61 FEVCRRIRRTDQ---LPIILLTARNDDIDVVVGLESGADDYVVKPV 103
>P13792 Alkaline phosphatase synthesis transcriptional regulatory
protein PhoP [Bacillus subtilis (strain 168)]
Length=240
Score = 75.5 bits (184), Expect = 4e-21
Identities = 34/109 (31%), Positives = 68/109 (62%), Gaps = 2/109 (2%)
Query 3 RILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQ 62
+IL+VDD + + L R GY V+ A++G + + A+ E+PDL+++DV++P ++G +
Sbjct 4 KILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVMLPKLDGIE 63
Query 63 ATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQL 111
+Q+ +Q P+++++ KD+ D++ G GA +Y+TKP ++
Sbjct 64 VCKQL--RQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREV 110
>Q9F8D7 Sensor histidine kinase GacS [Pseudomonas protegens (strain
DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)]
Length=917
Score = 77.0 bits (188), Expect = 5e-21
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (3%)
Query 3 RILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQ 62
R+L VDD+P + +L G +VL NG + Q E DLV+MDV MPG++G Q
Sbjct 668 RVLCVDDNPANLLLIQTLLEDMGAKVLAVDNGYAALNAIQTEPFDLVMMDVQMPGMDGRQ 727
Query 63 ATRQICRGEQTKH---IPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQY 118
+T I + E +H +P+V ++ A ++ + G +YLTKPI E QL +V+ ++
Sbjct 728 STEAIRQWESERHGTPLPIVALTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKW 786
>Q1XDE4 Probable transcriptional regulator ycf29 [Neopyropia yezoensis]
Length=222
Score = 74.7 bits (182), Expect = 5e-21
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 0/120 (0%)
Query 3 RILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQ 62
++++V++ + ++ L G+ V A NG + + LA DL++ D++MP VNG++
Sbjct 4 KLMLVENDIVLSKAIQEYLIDQGFNVYIANNGLEALNLAYQYNFDLIISDIMMPLVNGYE 63
Query 63 ATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYIHTD 122
++ + + IPV+ ++ K DRI G G YL+KP D N+L+ +I I D
Sbjct 64 LLAKLKKNKALSKIPVIFLTAKGMTKDRIKGYDMGCYGYLSKPFDPNELLSIINNLIARD 123
>Q56312 Chemotaxis protein CheY [Thermotoga maritima (strain ATCC
43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)]
Length=120
Score = 72.0 bits (175), Expect = 7e-21
Identities = 37/116 (32%), Positives = 68/116 (59%), Gaps = 3/116 (3%)
Query 3 RILIVDDSPTETYRFRDILTRHGYQVL-EATNGADGVTLAQAEQPDLVLMDVVMPGVNGF 61
R+LIVDD+ +DI+T+ GY+V EATNG + V + +PD+V MD+ MP +NG
Sbjct 4 RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGI 63
Query 62 QATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQ 117
A ++I + + + +++ S Q I + GA++++ KP ++++E + +
Sbjct 64 DAIKEIMKID--PNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNK 117
>P46384 Protein PilG [Pseudomonas aeruginosa (strain ATCC 15692
/ DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS
101 / PAO1)]
Length=135
Score = 72.4 bits (176), Expect = 7e-21
Identities = 33/117 (28%), Positives = 66/117 (56%), Gaps = 0/117 (0%)
Query 3 RILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQ 62
+++++DDS T +L + G V+ A +G D + P+++ +D++MP ++G+Q
Sbjct 9 KVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQ 68
Query 63 ATRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQYI 119
I K PV+++S+KD D+ G+ G+ +YLTKP + +L+ I+ ++
Sbjct 69 TCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHV 125
>P51586 Uncharacterized 14.6 kDa protein in sodA1 3'region [Leptolyngbya
boryana]
Length=131
Score = 71.6 bits (174), Expect = 1e-20
Identities = 38/115 (33%), Positives = 63/115 (55%), Gaps = 0/115 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
IL+VDD P R +L G V A N + ++L + E P L++ DV MP ++GF+
Sbjct 9 ILVVDDDPDTRDLLRFMLEDEGAIVTVAPNAKEALSLLERELPKLLVSDVAMPEMDGFEL 68
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLIEVIQQY 118
++ + + +P + ++ + DR R G +YLTKP+D +LI ++QQY
Sbjct 69 IGRVRELPKGETLPAIALTAYAREEDRQAALRSGFNDYLTKPVDPLELIRLVQQY 123
>P23620 Phosphate regulon transcriptional regulatory protein PhoB
[Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 /
CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=229
Score = 73.6 bits (179), Expect = 2e-20
Identities = 37/109 (34%), Positives = 60/109 (55%), Gaps = 0/109 (0%)
Query 4 ILIVDDSPTETYRFRDILTRHGYQVLEATNGADGVTLAQAEQPDLVLMDVVMPGVNGFQA 63
ILIVDD L GY+ LEA N + +PDL+L+D ++PG +G +
Sbjct 6 ILIVDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIVDRKPDLILLDWMLPGTSGIEL 65
Query 64 TRQICRGEQTKHIPVVIVSTKDQATDRIWGKRQGAREYLTKPIDENQLI 112
R++ R E T IP+++++ K + ++I G GA +Y+TKP +L+
Sbjct 66 ARRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELV 114
Lambda K H a alpha
0.324 0.139 0.412 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 296912
Database: d55bfeb1829a89050d7127860cd90db4.SwissProt.fasta
Posted date: May 30, 2024 8:52 PM
Number of letters in database: 3,986
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
