BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 8d8993eceb6c1817dac6d16e8ab99b0a.SwissProt.fasta
10 sequences; 4,751 total letters
Query= ACIAD0805
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
P44555 Uncharacterized transporter HI_0183 [Haemophilus influenza... 525 0.0
O31464 Probable sodium/glutamine symporter GlnT [Bacillus subtili... 424 1e-148
Q45068 Amino-acid carrier protein AlsT [Bacillus subtilis (strain... 406 1e-141
P30143 Uncharacterized transporter YaaJ [Escherichia coli (strain... 370 2e-127
O32060 Putative sodium/proton-dependent alanine carrier protein Y... 333 7e-113
Q6LX42 Sodium/alanine symporter AgcS [Methanococcus maripaludis (... 276 5e-91
O34708 Uncharacterized transporter YflA [Bacillus subtilis (strai... 274 3e-90
P30145 Sodium/proton-dependent alanine carrier protein [Bacillus ... 268 6e-88
P44917 Uncharacterized transporter HI_0883 [Haemophilus influenza... 266 3e-87
P30144 Na(+)-linked D-alanine glycine permease [Pseudoalteromonas... 233 2e-73
>P44555 Uncharacterized transporter HI_0183 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=481
Score = 525 bits (1353), Expect = 0.0
Identities = 276/486 (57%), Positives = 345/486 (71%), Gaps = 22/486 (5%)
Query 17 LMSW-VSFFNDPLWDFLVIFLLAAGTFYTIATKAVQIRMFWQSIRVMKGSRK-EGEDEHG 74
+++W V+ + PLWD +I LL G F+TI T VQ R+F S+R M R EG
Sbjct 14 VLTWIVAHLDGPLWDATIIILLGTGLFFTITTGFVQFRLFPASLREMWFGRSVEGSS--- 70
Query 75 ITPFQAFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFK 134
+TPFQAF TGLASRVGVGNI GVA AIALGG GAVFWMWVTA +GMSSAF ESTLAQLFK
Sbjct 71 LTPFQAFTTGLASRVGVGNIGGVATAIALGGEGAVFWMWVTAFIGMSSAFAESTLAQLFK 130
Query 135 VRDSETKQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSVQINAIANATSHSWGW 194
++D + FRGGPAYYI QGLKS+ + FAL+LIFT+GF FNSVQ N+I ATS++W W
Sbjct 131 IQDKDGS-FRGGPAYYIVQGLKSRCMAVAFALALIFTFGFAFNSVQANSIVEATSNAWNW 189
Query 195 DKANIILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAALYI 254
+ +VG+ LV+ A+ IFGG+KRIA + VP+ A YL A+ I
Sbjct 190 --------------KGEYVGISLVIFTALIIFGGVKRIAIISSNLVPMMALFYLIMAVII 235
Query 255 AVINYDILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPNAA 314
++ D++P + I AF F AAAGG FG ++S AMM GIKRGLFSNEAGMGSAPN+A
Sbjct 236 LGMHIDMIPSVIHRIVQSAFSFDAAAGGMFGALVSKAMMMGIKRGLFSNEAGMGSAPNSA 295
Query 315 AASDVKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYHDGGTIGVEMTQRALESQLG 374
AA+ VKHPV QGLVQMLGVFVDT IVCT TA+IIL+S Y + +TQ AL+ +G
Sbjct 296 AAAHVKHPVSQGLVQMLGVFVDTMIVCTCTAVIILLSNNYGSETLKSISLTQNALQYHIG 355
Query 375 SWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFINNNPKVMFIFRIFVLLMVYFGAISSVP 434
+G FLA +L LF YS+++GNYAYAE N++FI N P ++ +FR+ VL VYFGA+ S
Sbjct 356 EFGAHFLAFILLLFAYSSIIGNYAYAESNIRFIKNKPWLVLLFRLMVLFFVYFGAVRSGN 415
Query 435 LVWSMADLFMGIMATINLIAILLLTPFVRSLLKDYQLQLKKGIKQPEFKIDQHPEMKKKV 494
+VW+ AD M +MA INLIAIL+L+P V L+KDYQ QLK+G K PEFKID++PE++KK+
Sbjct 416 VVWNFADTVMAVMAIINLIAILMLSPIVWKLMKDYQRQLKEG-KTPEFKIDEYPELRKKI 474
Query 495 -DSDIW 499
DS IW
Sbjct 475 FDSRIW 480
>O31464 Probable sodium/glutamine symporter GlnT [Bacillus subtilis
(strain 168)]
Length=478
Score = 424 bits (1091), Expect = 1e-148
Identities = 219/466 (47%), Positives = 301/466 (65%), Gaps = 23/466 (5%)
Query 21 VSFFNDPLWD-FLVIFLLAAGTFYTIATKAVQIRMFWQSIRVMKGSRKEGEDEHGITPFQ 79
V ND LW L++ LL+ G ++T K +Q+RM + +RV++ ++ I+PFQ
Sbjct 9 VGIANDLLWSKLLIVLLLSFGIYFTFRLKFLQVRMLKEMVRVLREGAAS-RSKNSISPFQ 67
Query 80 AFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFKVRDSE 139
AF +A+RVG GNI G+AIAIALGGPGA+FWMW+ A++G +S+F ESTLAQ++KV+D
Sbjct 68 AFCISMAARVGTGNITGIAIAIALGGPGAIFWMWIIAIIGSASSFVESTLAQIYKVKD-- 125
Query 140 TKQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSVQINAIANATSHSWGWDKANI 199
FRGGPAYY+ +GL + G +FA+ + ++G VFNSVQ N ++ A +++G ++ +
Sbjct 126 VNGFRGGPAYYMEKGLNKRWMGALFAVLITLSFGIVFNSVQSNTVSLAFENAFGTNRLTL 185
Query 200 ILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAALYIAVINY 259
GL L+ + IFGG+KRIAK AE V + A LY+ A ++ N
Sbjct 186 --------------GLILIAVFGTIIFGGVKRIAKLAESIVVVLAVLYIGVAFFVIFSNI 231
Query 260 DILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPNAAAASDV 319
LP + LI AF F AAGG G A+MQG++RG+FSNEAGMGSAPNAAA +
Sbjct 232 TQLPGVLALIVKNAFGFDQAAGGALGA----ALMQGVRRGIFSNEAGMGSAPNAAATATT 287
Query 320 KHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYHDGGTIGVEMTQRALESQLGSWGGD 379
HPV QGL+Q GV DT ++CTSTA IIL S YH G G+ +TQ +L S +GSW
Sbjct 288 SHPVKQGLIQAFGVLTDTLVICTSTAFIILFSDAYHTPGLSGIALTQASLSSHVGSWASG 347
Query 380 FLAVLLFLFCYSAVLGNYAYAEGNMQFINNNPKVMFIFRIFVLLMVYFGAISSVPLVWSM 439
FLA+L+ LF + A++GNY Y E N+ F+N + K++F++RI VL M+ FG ++ V LVW +
Sbjct 348 FLAILILLFGFCALIGNYYYGETNIGFLNKSKKLIFVYRIGVLAMIVFGCVAKVQLVWDL 407
Query 440 ADLFMGIMATINLIAILLLTPFVRSLLKDYQLQLKKGIKQPEFKID 485
ADLFMG+M +NLIAI LL+ V + LKDY Q K G K P F D
Sbjct 408 ADLFMGLMVIVNLIAIFLLSKVVFTALKDYTRQKKAG-KDPVFYKD 452
>Q45068 Amino-acid carrier protein AlsT [Bacillus subtilis (strain
168)]
Length=465
Score = 406 bits (1044), Expect = 1e-141
Identities = 221/477 (46%), Positives = 294/477 (62%), Gaps = 33/477 (7%)
Query 22 SFFN-------DPLWDFLVIFLLAAGTFYTIATKAVQIRMFWQSIRVMKGSRKEGEDEHG 74
SFFN D +W +L L+ G F+TI +Q R F + R++ G + EG G
Sbjct 3 SFFNSLINIPSDFIWKYLFYILIGLGLFFTIRFGFIQFRYFIEMFRIV-GEKPEGNK--G 59
Query 75 ITPFQAFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFK 134
++ QAF ASRVG GN+ GVA+AIA GGPGAVFWMWV A +GM+S+F ESTLAQL+K
Sbjct 60 VSSMQAFFISAASRVGTGNLTGVALAIATGGPGAVFWMWVVAAVGMASSFVESTLAQLYK 119
Query 135 VRDSETKQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSVQINAIANATSHSWGW 194
VRD E FRGGPAYYI +GL ++ G+VFA+ + ++G +FN+VQ N IA A
Sbjct 120 VRDGE--DFRGGPAYYIQKGLGARWLGIVFAILITVSFGLIFNAVQTNTIAGALD----- 172
Query 195 DKANIILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAALYI 254
G + V + L VL A IFGG+KR+ +++ VP+ AG+Y+ AL++
Sbjct 173 ---------GAFHVNKIVVAIVLAVLTAFIIFGGLKRVVAVSQLIVPVMAGIYILIALFV 223
Query 255 AVINYDILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPNAA 314
+ N P + I A F+ GG GG+I + G +RGLFSNEAGMGSAPNAA
Sbjct 224 VITNITAFPGVIATIVKNALGFEQVVGGGIGGIIVI----GAQRGLFSNEAGMGSAPNAA 279
Query 315 AASDVKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYHDGGTIGVEMTQRALESQLG 374
A + V HP QG +Q LGVF DTFI+CTSTA IIL+ V G G+++TQ AL +G
Sbjct 280 ATAHVSHPAKQGFIQTLGVFFDTFIICTSTAFIILLYSVTPKGD--GIQVTQAALNHHIG 337
Query 375 SWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFINNNPKVMFIFRIFVLLMVYFGAISSVP 434
W F+AV +FLF +S+V+GNY Y E N++FI + + I+RI V+ MV +G++S
Sbjct 338 GWAPTFIAVAMFLFAFSSVVGNYYYGETNIEFIKTSKTWLNIYRIAVIAMVVYGSLSGFQ 397
Query 435 LVWSMADLFMGIMATINLIAILLLTPFVRSLLKDYQLQLKKGIKQPEFKIDQHPEMK 491
+VW MADLFMGIMA INLI I LL+ + KDY Q K+G+ P FK P +K
Sbjct 398 IVWDMADLFMGIMALINLIVIALLSNVAYKVYKDYAKQRKQGL-DPVFKAKNIPGLK 453
>P30143 Uncharacterized transporter YaaJ [Escherichia coli (strain
K12)]
Length=476
Score = 370 bits (950), Expect = 2e-127
Identities = 204/486 (42%), Positives = 303/486 (62%), Gaps = 29/486 (6%)
Query 22 SFFNDPLWDFLVIFLL-AAGTFYTIATKAVQIRMFWQSIRVMKGSRKEGEDEHGITPFQA 80
SF N LW ++I+LL AG ++T T VQ R Q + +K S G+T FQ+
Sbjct 6 SFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHP--QPGGLTSFQS 63
Query 81 FVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFKVRDSET 140
T LA+RVG GN+AGVA+AI GGPGAVFWMWV A +GM+++F E +LAQL+K RD
Sbjct 64 LCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERD-VN 122
Query 141 KQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSVQINAIANATSHSWGWDKANII 200
QFRGGPA+Y+ +GL + G++FA+ L+ YG +F+ VQ NA+A A S S+
Sbjct 123 GQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGVQANAVARALSFSF-------- 174
Query 201 LPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAALYIAVINYD 260
+F G+ L V +AI G+ +A+ + FVP+ A +++ +L I V+N
Sbjct 175 ------DFPPLVTGIILAVFTLLAITRGLHGVARLMQGFVPLMAIIWVLTSLVICVMNIG 228
Query 261 ILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPN--AAAASD 318
LP + IF AF ++ AAGG G +S A+ G +R +FSNEAGMGS PN AAAAS
Sbjct 229 QLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASW 288
Query 319 VKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYHDGGTI----GVEMTQRALESQLG 374
HP QG+VQM+G+F+DT ++CT++A++IL++G +G T G+++ Q+A+ +G
Sbjct 289 PPHPAAQGIVQMIGIFIDTLVICTASAMLILLAG---NGTTYMPLEGIQLIQKAMRVLMG 345
Query 375 SWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFIN-NNPKVMFIFRIFVLLMVYFGAISSV 433
SWG +F+ +++ LF +S+++ NY YAE N+ F+ NNPK ++ RI V G + S+
Sbjct 346 SWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSL 405
Query 434 PLVWSMADLFMGIMATINLIAILLLTPFVRSLLKDYQLQLKKGIKQPEFKIDQHPEMKKK 493
PL+W +AD+ M MA NL AILLL+P V ++ DY Q K G++ P F ++P++ ++
Sbjct 406 PLMWQLADIIMACMAITNLTAILLLSPVVHTIASDYLRQRKLGVR-PVFDPLRYPDIGRQ 464
Query 494 VDSDIW 499
+ D W
Sbjct 465 LSPDAW 470
>O32060 Putative sodium/proton-dependent alanine carrier protein
YrbD [Bacillus subtilis (strain 168)]
Length=484
Score = 333 bits (854), Expect = 7e-113
Identities = 195/479 (41%), Positives = 283/479 (59%), Gaps = 42/479 (9%)
Query 17 LMSWVSFFNDPLWDFLVIF-LLAAGTFYTIATKAVQIRMFWQSI-RVMKGSRKEGEDEHG 74
+ +V+ N LW VI+ LL G ++I T+ +Q+R + I ++ KG E G
Sbjct 1 MADFVASLNAVLWSTPVIYILLGIGFAFSIMTRFLQVRHLKEMIVQMFKGKSSEA----G 56
Query 75 ITPFQAFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFK 134
++ FQA L+ RVG GNIAGVA AIA GGPGAVFWMW A +G +SAF ESTLAQ++K
Sbjct 57 VSSFQALSIALSGRVGTGNIAGVATAIAFGGPGAVFWMWAIAFIGAASAFVESTLAQIYK 116
Query 135 VRDSETKQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSVQINAIANATSHSWGW 194
V+ + Q+RGGPAYYI +GL K F ++FA + + F+ VQ N+IA +++G
Sbjct 117 VK--QDGQYRGGPAYYIEKGLGIKWFAVLFAAAALIAMAFLMPGVQSNSIAAGIQNAFG- 173
Query 195 DKANIILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAALYI 254
I P G GLV+L+ IFGG+KRIA A+M VP A Y+ +L I
Sbjct 174 -----ISPFV--------TGCGLVLLLGFIIFGGVKRIANAAQMIVPFMAIGYILLSLII 220
Query 255 AVINYDILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPNAA 314
V+N LP + LIF AF +A FGG+I +A+ G+KRG++SNEAG G+ P+ A
Sbjct 221 IVMNVSELPAVISLIFKSAFALDSA----FGGLIGMAISWGVKRGIYSNEAGQGTGPHPA 276
Query 315 AASDVKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYH----DGGTI-----GVE-- 363
AA++V HPV QGLVQ V++DT VC++TA +IL +G+Y+ DG I GVE
Sbjct 277 AAAEVSHPVKQGLVQAFSVYIDTLFVCSATAFMILFTGMYNTQAADGSFIVHQLKGVEAG 336
Query 364 --MTQRALESQLGSWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFI---NNNPKVMFIFR 418
TQ A++S L +G F+A+ LF F ++ ++ Y AE N+ ++ + M +
Sbjct 337 PGFTQAAIDSVLPGFGAGFVAIALFFFAFTTIMAYYYIAETNIAYLARGRESKWAMLGLK 396
Query 419 IFVLLMVYFGAISSVPLVWSMADLFMGIMATINLIAILLLTPFVRSLLKDYQLQLKKGI 477
+ +L ++G + + L W++ D +GIM +N+IAI+LL LKDY+ Q K+G+
Sbjct 397 LIILAATFYGTVKTASLAWALGDAGLGIMVWLNVIAIVLLAKPALLALKDYERQKKQGL 455
>Q6LX42 Sodium/alanine symporter AgcS [Methanococcus maripaludis
(strain S2 / LL)]
Length=453
Score = 276 bits (705), Expect = 5e-91
Identities = 171/460 (37%), Positives = 251/460 (55%), Gaps = 29/460 (6%)
Query 18 MSWVSFFNDPLWD-FLVIFLLAAGTFYTIATKAVQIRMFWQSIRVMKGSRKEGEDEHGIT 76
+S V+ N +W ++++ LL G F T+ +QI ++++ ++ E I+
Sbjct 4 VSLVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEGDIS 63
Query 77 PFQAFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFKVR 136
FQA +T LA+ +G GNIAGVA A LGGPGA+FWMWVTA GM++ + E+ LA ++
Sbjct 64 HFQALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYRTV 123
Query 137 DSETKQFRGGPAYYITQGLK----SKTFGLVFALSLIFTYGFVFNSVQINAIANATSHSW 192
D + + GGP Y++ +GL K G+ FA F + N VQ N++A+A + ++
Sbjct 124 D-DNGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAVASNF 182
Query 193 GWDKANIILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAAL 252
G D G L + A I GGIK I K + VP A Y+ A L
Sbjct 183 GVDPL--------------ITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGL 228
Query 253 YIAVINYDILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPN 312
I +N + F IF+ AF F A FG +I A+M G+KRG+FSNEAG+GSAP
Sbjct 229 VILAMNIGYIIPAFGTIFSSAFNFSAG----FGALIGTAIMWGVKRGVFSNEAGLGSAPI 284
Query 313 AAAASDVKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYHDGG---TIGVEMTQRAL 369
AAAA+ HP Q LV M G F+DT +VCT T L++ I+G+ G G +T +
Sbjct 285 AAAAAKTDHPGRQALVSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASF 344
Query 370 ESQLGSWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFINNNPKVMFIFRIFVLLMVYFGA 429
++ L GG + + L F YS VLG Y E +++ K + ++RI +L+ ++GA
Sbjct 345 DA-LMPMGGLIVTIGLVFFAYSTVLGWSYYGEKCFEYLIGT-KGIRLYRIAFVLVAFWGA 402
Query 430 ISSVPLVWSMADLFMGIMATINLIAILLLTPFVRSLLKDY 469
+S+PLVW++AD G MA NLI +LLL+ V S K +
Sbjct 403 TASLPLVWNIADTLNGAMAIPNLIGLLLLSGVVVSETKAF 442
>O34708 Uncharacterized transporter YflA [Bacillus subtilis (strain
168)]
Length=471
Score = 274 bits (701), Expect = 3e-90
Identities = 161/460 (35%), Positives = 251/460 (55%), Gaps = 27/460 (6%)
Query 17 LMSWVSFFNDPLWDF-LVIFLLAAGTFYTIATKAVQIR----MFWQSIRVMKGSRKEGED 71
L+ W+ +D LW L+I L G ++TI K Q R +F Q+I + G + +GE
Sbjct 4 LLVWIEHISDWLWGPPLIILLTGTGLYFTILLKGFQFRYPLYIFKQTIGSV-GKKPKGEG 62
Query 72 EHGITPFQAFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQ 131
+TP QA + L+S +G NI GV AI GGPGAVFWMW+ AL M+ F+ES LA
Sbjct 63 T--VTPLQALTSALSSTIGAANIVGVPAAIMFGGPGAVFWMWLIALFAMAIKFSESVLAV 120
Query 132 LFKVRDSETKQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSVQINAIANATSHS 191
++ ++ E ++ GGP YYIT+GL+ K G+ F+++LI VQ N+++ + + +
Sbjct 121 HYREKN-EQGEYVGGPMYYITKGLRMKWLGVFFSVALIVEL-IPSIMVQGNSVSVSLAET 178
Query 192 WGWDKANIILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAA 251
+ ++K + G+G+ L+ + + GG+KRI K E VP+ AG Y A
Sbjct 179 FSFNKI--------------YAGIGIAFLIGLVVIGGVKRIGKVTEFVVPLMAGAYAGAG 224
Query 252 LYIAVINYDILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAP 311
L I ++N +P F L+F+ AF +A GGF G ++ + G RGL+SNEAGMG+AP
Sbjct 225 LLIVLMNLSSVPAFFSLVFSNAFTSSSAVGGFAGAALAETVRWGFARGLYSNEAGMGTAP 284
Query 312 NAAAASDVKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVY--HDGGTIGVEMTQRAL 369
A AA+ HPV QG ++G+ +DT I+CT+TA I+L SGV+ + +T A
Sbjct 285 IAHAAAMTDHPVRQGFWSVIGIVIDTLIICTTTAFIVLASGVWTGKNASNDPAALTTAAF 344
Query 370 ESQLGSWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFINNNPKVMFIFRIFVLLMVYFGA 429
+ GS GG F++V L F S ++ Y +F+ + + L + GA
Sbjct 345 QHYFGSGGGYFVSVSLVFFVVSTIMVVIFYGVKQAEFLFGR-LAGHVIKFVYLAAIIIGA 403
Query 430 ISSVPLVWSMADLFMGIMATINLIAILLLTPFVRSLLKDY 469
+W + DL + + N+IA+LLL+ V++L ++
Sbjct 404 AGGAKAIWGVLDLALVFIVVPNVIALLLLSRKVKALYTEF 443
>P30145 Sodium/proton-dependent alanine carrier protein [Bacillus
sp. (strain PS3)]
Length=445
Score = 268 bits (684), Expect = 6e-88
Identities = 160/442 (36%), Positives = 242/442 (55%), Gaps = 57/442 (13%)
Query 72 EHGITPFQAFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQ 131
E G++ FQA L+ R+GVGN+AG A IA GGPGAVFWMWV +G ++A+ EST +
Sbjct 12 EAGVSSFQALTMSLSGRIGVGNVAGTATGIAYGGPGAVFWMWVITFIGAATAYVESTWRK 71
Query 132 LFK---------VRDSETKQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSVQIN 182
K VR S K+ G GL+ ++ +++++ +Q N
Sbjct 72 FIKRNKTDNTVAVRRSTLKKALAG------NGLRCSRAAIILSMAVLMP------GIQAN 119
Query 183 AIANATSHSWGWDKANIILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPI 242
+IA++ S+++G K G+ ++ ++ IFGG+KRIAK AE+ VP
Sbjct 120 SIADSFSNAFGIPKLV--------------TGIFVIAVLGFTIFGGVKRIAKTAEIVVPF 165
Query 243 KAGLYLAAALYIAVINYDILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFS 302
A YL A+ I N + +PD+F LIF AF A FGG++ A+M G+KRGL++
Sbjct 166 MAVGYLFVAIAIIAANIEKVPDVFGLIFKSAF----GADQVFGGILGSAVMWGVKRGLYA 221
Query 303 NEAGMGSAPNAAAASDVKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYH-----DG 357
NEAG G+ + AAA++V HP QGLVQ +++D F+V T+TAL+IL +G Y+ G
Sbjct 222 NEAGQGTGAHPAAAAEVSHPAKQGLVQAFSIYLDVFLVVTATALMILFTGQYNVINEKTG 281
Query 358 GTI---------GVEMTQRALESQLGSWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFIN 408
TI G TQ A+++ +G F+A+ LF F ++ + Y AE N+ ++
Sbjct 282 ETIVEHLKGVEPGAGYTQAAVDTLFPGFGSAFIAIALFFFAFTTMYAYYYIAETNLAYLV 341
Query 409 NNPK---VMFIFRIFVLLMVYFGAISSVPLVWSMADLFMGIMATINLIAILLLTPFVRSL 465
+ K F ++ L ++G + + W+M D+ +GIM +NLIAILLL
Sbjct 342 RSEKRGTAFFALKLVFLAATFYGTVKTATTAWAMGDIGLGIMVWLNLIAILLLFKPAYMA 401
Query 466 LKDYQLQLKKGIKQPEFKIDQH 487
LKDY+ QLK+G K PEF ++
Sbjct 402 LKDYEEQLKQG-KDPEFNASKY 422
>P44917 Uncharacterized transporter HI_0883 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=456
Score = 266 bits (680), Expect = 3e-87
Identities = 163/462 (35%), Positives = 255/462 (55%), Gaps = 21/462 (5%)
Query 16 TLMSWVSFFNDPLWDF-LVIFLLAAGTFYTIATKAVQIRMFWQSIRVMKGSRKEGEDEHG 74
T+ S +S + +W L+I L G + T+ +QIR +++ + K G+ +
Sbjct 2 TIESILSAIDSFIWGAPLLILLSGTGLYLTLRLGFIQIRYLPRALGYLFKKDKGGKGD-- 59
Query 75 ITPFQAFVTGLASRVGVGNIAGVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFK 134
++ F A T LA+ +G GNI GVA A+ GGPGA+FWMW+ ALLGM++ + E LA ++
Sbjct 60 VSSFAALCTALAATIGTGNIVGVATAVQAGGPGAIFWMWLVALLGMATKYAECLLAVKYR 119
Query 135 VRDSETKQFRGGPAYYITQGLKSKTFGLVFALSLIFTYGFVFNSV-QINAIANATSHSWG 193
VRD + GGP YYI +GL + +FAL + F + Q+NAI +A ++
Sbjct 120 VRD-KNGFMAGGPMYYIERGLGIRWLAKLFALFGVMVAFFGIGTFPQVNAITHAMQDTF- 177
Query 194 WDKANIILPMGGLNFEVSWVGLGLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAALY 253
N V + + +LV + I GG+KRIA + + VP A LY+ +L
Sbjct 178 -------------NIPVLVTAIIVTLLVGLIILGGVKRIATASSVIVPFMAILYVTTSLV 224
Query 254 IAVINYDILPDIFKLIFTEAFEFKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPNA 313
I ++N + +PD LI AF+ +AA GG G + A+ G+ RG+FSNE+G+GSAP A
Sbjct 225 IILLNIEKVPDAILLIIDSAFDPQAALGGAVGLTVMKAIQSGVARGIFSNESGLGSAPIA 284
Query 314 AAASDVKHPVDQGLVQMLGVFVDTFIVCTSTALIILISGVYHDGGTIGVEMTQRALESQL 373
AAA+ + PV QGL+ M G F+DT IVCT T ++++++G +++ G +T A L
Sbjct 285 AAAAQTREPVRQGLISMTGTFLDTIIVCTMTGIVLVLTGAWNNPELAGATVTNYAFAQGL 344
Query 374 G-SWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFINNNPKVMFIFRIFVLLMVYFGAISS 432
G S G + V L F ++ +LG Y E ++ V ++R+ +++V GA
Sbjct 345 GTSIGATIVTVGLLFFAFTTILGWCYYGERCFVYLVGIRGVK-LYRLAYIMLVGLGAFLH 403
Query 433 VPLVWSMADLFMGIMATINLIAILLLTPFVRSLLKDYQLQLK 474
+ L+W +AD+ G+MA NLIA++ L + KDY +LK
Sbjct 404 LNLIWIIADIVNGLMAFPNLIALIGLRKVIIEETKDYFQRLK 445
>P30144 Na(+)-linked D-alanine glycine permease [Pseudoalteromonas
haloplanktis]
Length=542
Score = 233 bits (593), Expect = 2e-73
Identities = 129/321 (40%), Positives = 185/321 (58%), Gaps = 15/321 (5%)
Query 36 LLAAGTFYTIATKAVQIRMFWQSIRVMKGSRKEGEDEHGITPFQAFVTGLASRVGVGNIA 95
LL G F+TI K QIR F + +V+ G + + E T FQA T L+ VG GNI
Sbjct 12 LLGVGLFFTIYLKFPQIRYFKHACQVVSGKFDKKDTEGDTTHFQALATALSGTVGTGNIG 71
Query 96 GVAIAIALGGPGAVFWMWVTALLGMSSAFTESTLAQLFKVRDSETKQFRGGPAYYITQGL 155
GVA+AI++GGP A+FWMW+TA GM++ F E TL+ ++ + +E GGP YY+ + L
Sbjct 72 GVALAISIGGPAALFWMWMTAFFGMTTKFVEVTLSHKYREK-TEDGTMSGGPMYYMDKRL 130
Query 156 KSKTFGLVFALSLIFTYGFVFNSVQINAIANATSHSWGWDKANIILPMGGLNFEVSWVGL 215
K ++FA++ + + + QIN IA ++G+ PM G
Sbjct 131 NMKWLAILFAVATVISSFGTGSLPQINNIAQGMEATFGF------APMA--------TGA 176
Query 216 GLVVLVAIAIFGGIKRIAKFAEMFVPIKAGLYLAAALYIAVINYDILPDIFKLIFTEAFE 275
L +L+A+ I GGIKRIA VP+ A +Y+ AL + N + + F +F +AF
Sbjct 177 VLSILLALVILGGIKRIAAITSRVVPLMAAIYIIGALAVIFYNAENIGPSFSAVFMDAFS 236
Query 276 FKAAAGGFFGGMISLAMMQGIKRGLFSNEAGMGSAPNAAAASDVKHPVDQGLVQMLGVFV 335
AAAGGF G + A +G+ RGLFSNEAG GSAP A A++ PV +G+V +L F+
Sbjct 237 GSAAAGGFLGASFAYAFNRGVNRGLFSNEAGQGSAPIAHASAKADEPVSEGIVSILEPFI 296
Query 336 DTFIVCTSTALIILISGVYHD 356
DT I+CT T L+IL SGV+++
Sbjct 297 DTIIICTLTGLVILSSGVWNE 317
Score = 49.7 bits (117), Expect = 1e-09
Identities = 30/114 (26%), Positives = 59/114 (52%), Gaps = 2/114 (2%)
Query 363 EMTQRALE-SQLGSWGGDFLAVLLFLFCYSAVLGNYAYAEGNMQFINNNPKVMFIFRIFV 421
E+T +A + G G +++ L LF +S + Y + M ++ + VM +R+F
Sbjct 426 ELTTKAFKRGYFGDSGQYIVSIGLLLFAFSTAIAWSYYGDRAMIYLLGHRSVM-PYRVFY 484
Query 422 LLMVYFGAISSVPLVWSMADLFMGIMATINLIAILLLTPFVRSLLKDYQLQLKK 475
+ ++ + + LVW +A + + +M NLI I+LL ++ + DY ++ KK
Sbjct 485 VAAFFWASFADTTLVWKLAAVAIVVMTLPNLIGIMLLRKEMKESVDDYWVKFKK 538
Lambda K H a alpha
0.328 0.141 0.427 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1912950
Database: 8d8993eceb6c1817dac6d16e8ab99b0a.SwissProt.fasta
Posted date: May 20, 2024 3:04 AM
Number of letters in database: 4,751
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
