BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 8b25afee7b7d1ca851adf018f2e80d03.SwissProt.fasta
           4 sequences; 1,374 total letters



Query= ACIAD0811

Length=175
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O05215 Uncharacterized transporter YwrA [Bacillus subtilis (strai...  86.3    1e-25
P17551 Chromate transport protein [Cupriavidus metallidurans (str...  75.9    2e-20
Q58128 Uncharacterized transporter MJ0718 [Methanocaldococcus jan...  71.2    7e-19
Q55027 Probable chromate transport protein [Synechococcus elongat...  68.9    4e-18


>O05215 Uncharacterized transporter YwrA [Bacillus subtilis (strain 
168)]
Length=178

 Score = 86.3 bits (212),  Expect = 1e-25
 Identities = 50/165 (30%), Positives = 90/165 (55%), Gaps = 4/165 (2%)

Query  3    LILLNLTLVFTHLSVLAFGGGNAILPEMQYQVVTVHHWMTAEQFSSLFAMAQAAPGP-NM  61
            +I + L + F   ++L +GGG A +P M  +VV  + W++ +QFS++ A+A A PGP   
Sbjct  1    MISIYLFMAFFIANLLGYGGGPASIPLMFEEVVNRYSWLSNDQFSNMLALANALPGPIAT  60

Query  62   MIVPLVGWHVAGPAGLLVTSLAKFLPSSIITVYALKFWQRFKDHSLRARFEYALKPITVG  121
             I   VG+   G  G L+  +A  +PS++  +  L+  QRF+   +      +++P+   
Sbjct  61   KIAAYVGYSAGGWPGFLIALIATVVPSALALIVLLRIIQRFRQSPVIKGMTLSVQPVIAV  120

Query  122  LVLVSAWMIADASAQNIFLVMIVIITAI--MGMFK-KIHPLWIMI  163
            ++L+  W I     + I  V  ++IT I  + M K K+HP +++I
Sbjct  121  MMLILTWQIGADGIKAIGWVQSIVITGISLLAMTKFKMHPAFLII  165


>P17551 Chromate transport protein [Cupriavidus metallidurans 
(strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)]
Length=401

 Score = 75.9 bits (185),  Expect = 2e-20
 Identities = 46/167 (28%), Positives = 82/167 (49%), Gaps = 1/167 (1%)

Query  4    ILLNLTLVFTHLSVLAFGGGNAILPEMQYQVVTVHHWMTAEQFSSLFAMAQAAPGPNMMI  63
            +L  + + F       FG G AI+P +   VVT +HW+  +QF    A+A   PGP ++ 
Sbjct  226  LLSQIGVFFAKAGAFVFGSGLAIVPFLYGGVVTEYHWLNDKQFVDAVAVAMITPGPVVIT  285

Query  64   VPLVGWHVAGPAGLLVTSLAKFLPSSIITVYALKFWQRFKDHSLRARFEYALKPITVGLV  123
            V  +G+ VAG  G  V + A FLP  + TV    +++++        F   +    +G +
Sbjct  286  VGFIGYLVAGLPGACVAAAATFLPCYLFTVLPAPYFKKYGKLPAILAFVDGVTAAAIGAI  345

Query  124  LVSAWMIADASAQNIFLVMIVIIT-AIMGMFKKIHPLWIMIFGASLG  169
              +  ++A  S  +I   ++ ++T A++  FKK+    I+   A +G
Sbjct  346  TGAVIVLAKRSIVDIPTALLALVTVALLLKFKKLSEPMIVAGAALIG  392


 Score = 51.2 bits (121),  Expect = 6e-12
 Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 7/148 (5%)

Query  5    LLNLTLVFTHLSVLAFGGGNAILPEMQYQVVTVHHWMTAEQFSSLFAMAQAAPGP-NMMI  63
            L  L + F  L  L FGG  A+   M   +V    W+T   +    A+AQ APGP    +
Sbjct  23   LRQLVMYFLRLGTLGFGGPVALAGYMHRDLVEAKQWITDADYKEGLALAQLAPGPLAAQL  82

Query  64   VPLVGWHVAGPAGLLVTSLAKFLPSSIITVYALKFWQRFKDHSLRARFEYALKPITVGLV  123
               +G+      G  +  +A  LPS ++ +     + RF   +      Y +    +G++
Sbjct  83   AIYLGYVHYRIVGATLVGVAFVLPSFLMVLALGWAYVRFGGLTWMQSVFYGVGAAVIGII  142

Query  124  LVSAWMIADASAQN------IFLVMIVI  145
             +SA+ +   S  N      I+LV++ +
Sbjct  143  AISAYKLTKKSVGNDKLLWFIYLVLVAV  170


>Q58128 Uncharacterized transporter MJ0718 [Methanocaldococcus 
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 
/ NBRC 100440)]
Length=402

 Score = 71.2 bits (173),  Expect = 7e-19
 Identities = 45/171 (26%), Positives = 88/171 (51%), Gaps = 7/171 (4%)

Query  5    LLNLTLVFTHLSVLAFGGGNAILPEMQYQVVTVHHWMTAEQFSSLFAMAQAAPGPNMMIV  64
            L  L+ +   + V AFGGG   +P M ++VV  ++ M A+ F    A+ Q  PGP ++  
Sbjct  235  LFLLSTLMMKVDVFAFGGGYGSVPFMLHEVVDKYNLMDAKTFMDGIALGQITPGPIVITA  294

Query  65   PLVGWHVAGPAGLLVTSLAKFLPSSIITVYALKFWQRFKDHSLRARFEYALKPITVGL--  122
              VG+ V G  G ++++++ F PS II + ++  +   K +++     + +    VGL  
Sbjct  295  TFVGYIVGGFIGSIISTISVFTPSFIILLSSIPIFDSLKHNTIFKNILHMILVSFVGLLV  354

Query  123  -VLVSAWMIADASAQNIFLVMIVIITAIMGMFKKIHPLWIMIFGASLGTML  172
             V +   ++ D S Q     +I+ I + + ++KK + L +++    LG ++
Sbjct  355  AVTIRFALLVDWSIQ----ALIIFIVSFLLLYKKYNMLLVVLLSLVLGYLI  401


 Score = 57.4 bits (137),  Expect = 4e-14
 Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 3/168 (2%)

Query  6    LNLTLVFTHLSVLAFGGGNAILPEMQYQVVTVHHWMTAEQFSSLFAMAQAAPGPNMM-IV  64
            LN+ + F  L ++AFGG  AI   ++  VV    WM  + F++  A+AQ  PG ++M + 
Sbjct  24   LNIFMSFLKLGMVAFGGPTAIA-YVREMVVDEKKWMDEKSFNNGVALAQIIPGASVMQVA  82

Query  65   PLVGWHVAGPAGLLVTSLAKFLPSSIITVYALKFWQRFKDHSLRARFEYALKPITVGLVL  124
              VG+++ G  G     +A  LP+ +I ++    +   K          AL+ I V L  
Sbjct  83   AYVGFYLRGIVGAFAAFMAYALPAFLIMLFLTIIYMHVKSLPKTVSIFEALRIIVVSLAA  142

Query  125  VSAWMIADASAQNIFLVMIVIITAIMGMFKKIHPLWIMIFGASLGTML  172
                  +  + + I  V +++I+A++    K  P  ++     +G ++
Sbjct  143  NGTLNFSKKNIRTIGDVFLLLISALL-FILKFSPFIVIFVSIFIGFLM  189


>Q55027 Probable chromate transport protein [Synechococcus elongatus 
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=393

 Score = 68.9 bits (167),  Expect = 4e-18
 Identities = 45/173 (26%), Positives = 79/173 (46%), Gaps = 8/173 (5%)

Query  4    ILLNLTLVFTHLSVLAFGGGNAILPEMQYQVVTVHHWMTAEQFSSLFAMAQAAPGPNMMI  63
            +L  + L FT      FG G AI+P +   VV    W+ ++QF    A+A   PGP ++ 
Sbjct  220  LLGQIALFFTQAGAFVFGSGLAIVPFLYGGVVKDFGWLNSQQFLDAVAVAMITPGPVVIT  279

Query  64   VPLVGWHVAGPAGLLVTSLAKFLPSSIITVYALKFWQRFKDHSLRARFEYALKPITVGLV  123
               +G+ VAG  G  V ++A F+P  ++TV    +   FK H    +    +  +TV   
Sbjct  280  TGFIGFLVAGFPGACVAAIAMFIPCYLLTVIPAPY---FKKHGKNPKISTFVNGVTVAAT  336

Query  124  LVSAWMIADASAQNI-----FLVMIVIITAIMGMFKKIHPLWIMIFGASLGTM  171
               A  +     Q++     FL+ ++ + +   + KK+    I++  A  G +
Sbjct  337  GAIAGAVVVLGRQSLHDLPTFLIGLIALISSWKLGKKLPEPLIIVIAAIAGVI  389


 Score = 46.6 bits (109),  Expect = 2e-10
 Identities = 34/143 (24%), Positives = 62/143 (43%), Gaps = 1/143 (1%)

Query  5    LLNLTLVFTHLSVLAFGGGNAILPEMQYQVVTVHHWMTAEQFSSLFAMAQAAPGP-NMMI  63
            L  LT  F  L  L FGG  A++  M   +V    W++  ++     +AQ APGP    +
Sbjct  16   LKQLTQYFLKLGALGFGGPIALVGYMHRDLVEERQWVSEAEYQEGLTLAQVAPGPLAAQL  75

Query  64   VPLVGWHVAGPAGLLVTSLAKFLPSSIITVYALKFWQRFKDHSLRARFEYALKPITVGLV  123
               +G+   G  G  +  LA  LPS +I V     +  +   +      Y +    +G++
Sbjct  76   SFYLGYVHYGFLGSALVGLAFVLPSFLIVVALGWAYTLYGGLNWMQAVFYGVGAAVIGII  135

Query  124  LVSAWMIADASAQNIFLVMIVII  146
             +SA+ +   +    +L+  + +
Sbjct  136  AISAYKLTRKTVGTSWLLWSIYL  158



Lambda      K        H        a         alpha
   0.334    0.141    0.444    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 176364


  Database: 8b25afee7b7d1ca851adf018f2e80d03.SwissProt.fasta
    Posted date:  May 9, 2024  7:50 PM
  Number of letters in database: 1,374
  Number of sequences in database:  4



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40