BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a96076033b179655f3579b75fa743526.SwissProt.fasta
5 sequences; 1,790 total letters
Query= ACIAD0812
Length=190
Score E
Sequences producing significant alignments: (Bits) Value
Q58128 Uncharacterized transporter MJ0718 [Methanocaldococcus jan... 82.8 1e-22
Q55027 Probable chromate transport protein [Synechococcus elongat... 66.2 7e-17
P17551 Chromate transport protein [Cupriavidus metallidurans (str... 65.9 9e-17
P14285 Chromate transport protein [Pseudomonas aeruginosa] 62.4 2e-15
O05215 Uncharacterized transporter YwrA [Bacillus subtilis (strai... 58.2 1e-14
>Q58128 Uncharacterized transporter MJ0718 [Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045
/ NBRC 100440)]
Length=402
Score = 82.8 bits (203), Expect = 1e-22
Identities = 48/174 (28%), Positives = 88/174 (51%), Gaps = 7/174 (4%)
Query 11 ETTTTPDCKALFTGFMKLGLMGFGGVLPLAH--RMIVDEQKWLSESEFTNLLGICQLLPG 68
E P +F F+KLG++ FGG +A+ M+VDE+KW+ E F N + + Q++PG
Sbjct 16 EKRNNPSALNIFMSFLKLGMVAFGGPTAIAYVREMVVDEKKWMDEKSFNNGVALAQIIPG 75
Query 69 GNIINMSVAIGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGL-- 126
+++ ++ +G +G+ GA ++ + LI+L + IY H + LP + + L
Sbjct 76 ASVMQVAAYVGFYLRGIVGAFAAFMAYALPAFLIMLFLTIIYMHVKSLPKTVSIFEALRI 135
Query 127 --AAAAAGLLFATGLKMLRPIFKSYLTLFTIILTFI-FMLVIKLPLALTLAILM 177
+ AA K +R I +L L + +L + F I + +++ + LM
Sbjct 136 IVVSLAANGTLNFSKKNIRTIGDVFLLLISALLFILKFSPFIVIFVSIFIGFLM 189
Score = 46.6 bits (109), Expect = 4e-10
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 5/167 (3%)
Query 21 LFTGFMKLGLMGFGG---VLPLAHRMIVDEQKWLSESEFTNLLGICQLLPGGNIINMSVA 77
L T MK+ + FGG +P +VD+ + F + + + Q+ PG +I +
Sbjct 238 LSTLMMKVDVFAFGGGYGSVPFMLHEVVDKYNLMDAKTFMDGIALGQITPGPIVIT-ATF 296
Query 78 IGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAAAAAGLLFAT 137
+G G G+I S + + +I+L I+ ++ K+++ + + GLL A
Sbjct 297 VGYIVGGFIGSIISTISVFTPSFIILLSSIPIFDSLKHNTIFKNILHMILVSFVGLLVAV 356
Query 138 GLKMLRPIFKSYLTLFTIILTFIFMLVIKLPLALTLAILMIINLVIL 184
++ + S L I++F+ +L K + L + + +++ +IL
Sbjct 357 TIRFALLVDWSIQALIIFIVSFL-LLYKKYNMLLVVLLSLVLGYLIL 402
>Q55027 Probable chromate transport protein [Synechococcus elongatus
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=393
Score = 66.2 bits (160), Expect = 7e-17
Identities = 42/142 (30%), Positives = 72/142 (51%), Gaps = 3/142 (2%)
Query 19 KALFTGFMKLGLMGFGGVLPLA---HRMIVDEQKWLSESEFTNLLGICQLLPGGNIINMS 75
K L F+KLG +GFGG + L HR +V+E++W+SE+E+ L + Q+ PG +S
Sbjct 17 KQLTQYFLKLGALGFGGPIALVGYMHRDLVEERQWVSEAEYQEGLTLAQVAPGPLAAQLS 76
Query 76 VAIGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAAAAAGLLF 135
+G G G+ L + LIV+ + Y + L ++ + G+ AA G++
Sbjct 77 FYLGYVHYGFLGSALVGLAFVLPSFLIVVALGWAYTLYGGLNWMQAVFYGVGAAVIGIIA 136
Query 136 ATGLKMLRPIFKSYLTLFTIIL 157
+ K+ R + L++I L
Sbjct 137 ISAYKLTRKTVGTSWLLWSIYL 158
Score = 41.2 bits (95), Expect = 2e-08
Identities = 36/176 (20%), Positives = 69/176 (39%), Gaps = 6/176 (3%)
Query 12 TTTTPDCKALFTGFMKLGLMGFGG---VLPLAHRMIVDEQKWLSESEFTNLLGICQLLPG 68
T TT + F + G FG ++P + +V + WL+ +F + + + + PG
Sbjct 215 TATTSLLGQIALFFTQAGAFVFGSGLAIVPFLYGGVVKDFGWLNSQQFLDAVAVAMITPG 274
Query 69 GNIINMSVAIGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAA 128
+I IG G GA + + + L+ ++ + P + + G+
Sbjct 275 PVVITTGF-IGFLVAGFPGACVAAIAMFIPCYLLTVIPAPYFKKHGKNPKISTFVNGVTV 333
Query 129 AAAGLLFATGLKMLRPIFKSYLTLFTIILTFI--FMLVIKLPLALTLAILMIINLV 182
AA G + + + R T ++ I + L KLP L + I I ++
Sbjct 334 AATGAIAGAVVVLGRQSLHDLPTFLIGLIALISSWKLGKKLPEPLIIVIAAIAGVI 389
Score = 19.6 bits (39), Expect = 0.28
Identities = 11/37 (30%), Positives = 16/37 (43%), Gaps = 0/37 (0%)
Query 9 VSETTTTPDCKALFTGFMKLGLMGFGGVLPLAHRMIV 45
V+ TP + TGF+ + GF G A M +
Sbjct 266 VAVAMITPGPVVITTGFIGFLVAGFPGACVAAIAMFI 302
>P17551 Chromate transport protein [Cupriavidus metallidurans
(strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)]
Length=401
Score = 65.9 bits (159), Expect = 9e-17
Identities = 40/157 (25%), Positives = 78/157 (50%), Gaps = 3/157 (2%)
Query 12 TTTTPDCKALFTGFMKLGLMGFGGVLPLA---HRMIVDEQKWLSESEFTNLLGICQLLPG 68
T T + L F++LG +GFGG + LA HR +V+ ++W++++++ L + QL PG
Sbjct 17 TAPTYTLRQLVMYFLRLGTLGFGGPVALAGYMHRDLVEAKQWITDADYKEGLALAQLAPG 76
Query 69 GNIINMSVAIGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAA 128
+++ +G + GA + + L+VL + Y F L ++ + G+ A
Sbjct 77 PLAAQLAIYLGYVHYRIVGATLVGVAFVLPSFLMVLALGWAYVRFGGLTWMQSVFYGVGA 136
Query 129 AAAGLLFATGLKMLRPIFKSYLTLFTIILTFIFMLVI 165
A G++ + K+ + + L+ I L + + VI
Sbjct 137 AVIGIIAISAYKLTKKSVGNDKLLWFIYLVLVAVTVI 173
Score = 48.1 bits (113), Expect = 1e-10
Identities = 36/162 (22%), Positives = 68/162 (42%), Gaps = 5/162 (3%)
Query 25 FMKLGLMGFGG---VLPLAHRMIVDEQKWLSESEFTNLLGICQLLPGGNIINMSVAIGMQ 81
F K G FG ++P + +V E WL++ +F + + + + PG +I + IG
Sbjct 234 FAKAGAFVFGSGLAIVPFLYGGVVTEYHWLNDKQFVDAVAVAMITPGPVVITVGF-IGYL 292
Query 82 FQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAAAAAGLLFATGLKM 141
G+ GA + L ++ + + LP + + G+ AAA G + + +
Sbjct 293 VAGLPGACVAAAATFLPCYLFTVLPAPYFKKYGKLPAILAFVDGVTAAAIGAITGAVIVL 352
Query 142 L-RPIFKSYLTLFTIILTFIFMLVIKLPLALTLAILMIINLV 182
R I L ++ + + KL + +A +I LV
Sbjct 353 AKRSIVDIPTALLALVTVALLLKFKKLSEPMIVAGAALIGLV 394
Score = 15.4 bits (28), Expect = 6.4
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 6/25 (24%)
Query 168 PLALTLAILM------IINLVILGV 186
PLA LAI + I+ ++GV
Sbjct 77 PLAAQLAIYLGYVHYRIVGATLVGV 101
>P14285 Chromate transport protein [Pseudomonas aeruginosa]
Length=416
Score = 62.4 bits (150), Expect = 2e-15
Identities = 36/130 (28%), Positives = 67/130 (52%), Gaps = 9/130 (7%)
Query 21 LFTGFMKLGLMGFGGV---LPLAHRMIVDEQKWLSESEFTNLLGICQLLPGGNIINMSVA 77
LF F+K GL+ +GG + + R +VDE++W+S F LL + Q+LPG + V
Sbjct 31 LFARFLKFGLLAWGGPVAQIDMLRRELVDEERWISSKRFNKLLAVMQVLPGPEAHEICVH 90
Query 78 IGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAAAAAGLLFAT 137
+G++ +G G + + LG + L++ + +Y +++ T L AA G+ A
Sbjct 91 LGIRAKGRLGGVLAGLGFMLPGFLLMFALSWLYFQIEFVGT------ALGAAFLGVQAAV 144
Query 138 GLKMLRPIFK 147
++R + +
Sbjct 145 IALIVRAVHR 154
Score = 41.6 bits (96), Expect = 2e-08
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 11/162 (7%)
Query 21 LFTGFMKLGLMGFGG---VLPLAHRMIVDEQKWLSESEFTNLLGICQLLPGGNIINMSVA 77
+F +K GL+ FGG +P V + W+++ +F + L + +LP II +
Sbjct 242 IFASGLKAGLLTFGGAYTAIPFVRNDAVG-RGWMTDGQFLDGLALSGVLPAPLII-FATF 299
Query 78 IGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAAAAAGLLFAT 137
+G G GA++ +G+ L+ Y + + G+AA GL+ AT
Sbjct 300 VGYVAGGPIGAVAMTVGVFLPAFAFSLIFYDRLEAVVENKRLHAFLDGVAAGVVGLIGAT 359
Query 138 GLKMLR------PIFKSYLTLFTIILTFIFMLVIKLPLALTL 173
+ + + P +++F L F++ KL + + +
Sbjct 360 TIDLAQVTAERVPSLTVGMSIFAAGLAFLYAWKNKLNVVVVI 401
Score = 19.6 bits (39), Expect = 0.28
Identities = 10/22 (45%), Positives = 16/22 (73%), Gaps = 2/22 (9%)
Query 119 VKHLIQGLAAAAAGLLFATGLK 140
V+ ++QG A+ L+FA+GLK
Sbjct 229 VEAVVQGQASVL--LIFASGLK 248
>O05215 Uncharacterized transporter YwrA [Bacillus subtilis (strain
168)]
Length=178
Score = 58.2 bits (139), Expect = 1e-14
Identities = 39/170 (23%), Positives = 78/170 (46%), Gaps = 7/170 (4%)
Query 21 LFTGFMKLGLMGFGG---VLPLAHRMIVDEQKWLSESEFTNLLGICQLLPGGNIINMSVA 77
LF F L+G+GG +PL +V+ WLS +F+N+L + LPG ++
Sbjct 6 LFMAFFIANLLGYGGGPASIPLMFEEVVNRYSWLSNDQFSNMLALANALPGPIATKIAAY 65
Query 78 IGMQFQGVKGAISSVLGLICAPTLIVLMIYQIYAHFQYLPTVKHLIQGLAAAAAGLLFAT 137
+G G G + +++ + L ++++ +I F+ P +K + + A ++
Sbjct 66 VGYSAGGWPGFLIALIATVVPSALALIVLLRIIQRFRQSPVIKGMTLSVQPVIAVMMLIL 125
Query 138 GLKMLRPIFKSYLTLFTIILTFIFMLVIKL----PLALTLAILMIINLVI 183
++ K+ + +I++T I +L + P L +A + LVI
Sbjct 126 TWQIGADGIKAIGWVQSIVITGISLLAMTKFKMHPAFLIIAAFLYGGLVI 175
Lambda K H a alpha
0.334 0.147 0.435 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 250325
Database: a96076033b179655f3579b75fa743526.SwissProt.fasta
Posted date: May 9, 2024 8:50 PM
Number of letters in database: 1,790
Number of sequences in database: 5
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
