BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: d1b327afda1b13c43fd080d1bf7c19e8.TrEMBL.fasta
           2 sequences; 350 total letters



Query= ACIAD0817

Length=44
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FDY9 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  92.4    3e-32
A0A7Y5KRY3 Right-handed parallel beta-helix repeat-containing pro...  34.3    2e-08


>Q6FDY9 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=43

 Score = 92.4 bits (228),  Expect = 3e-32
 Identities = 42/43 (98%), Positives = 43/43 (100%), Gaps = 0/43 (0%)

Query  1   LVLRASIGSTVYHLNQNIFEQDYSFRPIIDICNQWTMMSCLAD  43
           +VLRASIGSTVYHLNQNIFEQDYSFRPIIDICNQWTMMSCLAD
Sbjct  1   MVLRASIGSTVYHLNQNIFEQDYSFRPIIDICNQWTMMSCLAD  43


>A0A7Y5KRY3 Right-handed parallel beta-helix repeat-containing 
protein [Polyangiaceae bacterium]
Length=307

 Score = 34.3 bits (77),  Expect = 2e-08
 Identities = 9/23 (39%), Positives = 16/23 (70%), Gaps = 0/23 (0%)

Query  13   HLNQNIFEQDYSFRPIIDICNQW  35
            H+  N+F +DY++ P+ D+C  W
Sbjct  271  HMTNNVFGEDYAYGPVTDVCGTW  293



Lambda      K        H        a         alpha
   0.341    0.146    0.493    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 10432


  Database: d1b327afda1b13c43fd080d1bf7c19e8.TrEMBL.fasta
    Posted date:  May 29, 2024  1:46 PM
  Number of letters in database: 350
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40