BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 7924e45d88b557454293404e1de811c3.SwissProt.fasta
3 sequences; 1,549 total letters
Query= ACIAD0834
Length=206
Score E
Sequences producing significant alignments: (Bits) Value
Q883R9 Phosphoserine phosphatase [Pseudomonas syringae pv. tomato... 277 3e-99
Q9I2Y2 Phosphoserine phosphatase ThrH [Pseudomonas aeruginosa (st... 273 4e-98
P98205 Phospholipid-transporting ATPase 2 [Arabidopsis thaliana] 34.3 6e-06
>Q883R9 Phosphoserine phosphatase [Pseudomonas syringae pv. tomato
(strain ATCC BAA-871 / DC3000)]
Length=237
Score = 277 bits (708), Expect = 3e-99
Identities = 133/203 (66%), Positives = 162/203 (80%), Gaps = 0/203 (0%)
Query 1 MEIVCLDLEGVLVPEIWINFAKKTGIKELEATTRDIPDYDVLMTQRLNILKQHGLGLNDI 60
+EI CLDLEGVLVPEIWI FA+KTGI+ L ATTRDIPDYDVLM QRL IL +HGL L DI
Sbjct 33 VEIACLDLEGVLVPEIWIAFAEKTGIESLRATTRDIPDYDVLMKQRLRILDEHGLKLADI 92
Query 61 QAVIADMGPLPGAKEFVEWVRTHFQLIILSDTFYEFAHPLMQQLGWPTIFCHKLKSDEQG 120
QAVI+ + PL GA EFV+W+R FQ++ILSDTFYEF+ PLM+QLG+PT+ CH+L +DE
Sbjct 93 QAVISTLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHRLITDETD 152
Query 121 MITAYKLRQPDQKREAVKALHGLNFRVIAAGDSYNDTTMLGEADHGFLFDAPENVIAEFP 180
+ +Y+LRQ D KR++V A L +R+IAAGDSYNDTTMLGEAD G LF AP+NVI EFP
Sbjct 153 RVVSYQLRQKDPKRQSVLAFKSLYYRIIAAGDSYNDTTMLGEADAGILFHAPDNVIREFP 212
Query 181 QFPAIHGYDALKEAIRAVSQRDI 203
QFPA+H +D LK+ S R++
Sbjct 213 QFPAVHTFDELKKEFIKASNREL 235
>Q9I2Y2 Phosphoserine phosphatase ThrH [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=205
Score = 273 bits (698), Expect = 4e-98
Identities = 134/203 (66%), Positives = 156/203 (77%), Gaps = 0/203 (0%)
Query 1 MEIVCLDLEGVLVPEIWINFAKKTGIKELEATTRDIPDYDVLMTQRLNILKQHGLGLNDI 60
MEI CLDLEGVLVPEIWI FA+KTGI L+ATTRDIPDYDVLM QRL IL +HGL L DI
Sbjct 1 MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDI 60
Query 61 QAVIADMGPLPGAKEFVEWVRTHFQLIILSDTFYEFAHPLMQQLGWPTIFCHKLKSDEQG 120
Q VIA + PL GA EFV+W+R FQ++ILSDTFYEF+ PLM+QLG+PT+ CHKL+ D+
Sbjct 61 QEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD 120
Query 121 MITAYKLRQPDQKREAVKALHGLNFRVIAAGDSYNDTTMLGEADHGFLFDAPENVIAEFP 180
+ Y+LRQ D KR++V A L +RVIAAGDSYNDTTML EA G LF APENVI EFP
Sbjct 121 RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFP 180
Query 181 QFPAIHGYDALKEAIRAVSQRDI 203
QFPA+H Y+ LK S R +
Sbjct 181 QFPAVHTYEDLKREFLKASSRSL 203
>P98205 Phospholipid-transporting ATPase 2 [Arabidopsis thaliana]
Length=1107
Score = 34.3 bits (77), Expect = 6e-06
Identities = 15/37 (41%), Positives = 22/37 (59%), Gaps = 0/37 (0%)
Query 130 PDQKREAVKALHGLNFRVIAAGDSYNDTTMLGEADHG 166
P QK + V+ L ++R +A GD ND M+ +AD G
Sbjct 730 PSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIG 766
Lambda K H a alpha
0.325 0.142 0.435 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 246924
Database: 7924e45d88b557454293404e1de811c3.SwissProt.fasta
Posted date: May 14, 2024 9:18 AM
Number of letters in database: 1,549
Number of sequences in database: 3
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
