BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1d1513d3e167286d91669eebb097aa2f.SwissProt.fasta
19 sequences; 4,573 total letters
Query= ACIAD0844
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
P46833 Gluconate operon transcriptional repressor [Bacillus liche... 54.7 2e-12
O05494 Uncharacterized HTH-type transcriptional regulator YdhC [B... 53.9 3e-12
P10585 Gluconate operon transcriptional repressor [Bacillus subti... 53.1 7e-12
P76114 HTH-type transcriptional regulator McbR [Escherichia coli ... 47.0 8e-10
P32425 Uncharacterized HTH-type transcriptional regulator in unst... 47.0 9e-10
P9WMG9 Uncharacterized HTH-type transcriptional regulator Rv0043c... 45.4 3e-09
P9WMG8 Uncharacterized HTH-type transcriptional regulator MT0049 ... 45.4 3e-09
P67738 Uncharacterized HTH-type transcriptional regulator Mb0044c... 45.4 3e-09
P70790 Uncharacterized HTH-type transcriptional regulator in the ... 43.9 6e-09
P9WMG4 HTH-type transcriptional regulator Mce2R [Mycobacterium tu... 42.4 3e-08
P67742 Uncharacterized HTH-type transcriptional regulator Mb0601 ... 42.4 3e-08
P9WMG5 HTH-type transcriptional regulator Mce2R [Mycobacterium tu... 42.4 3e-08
P37335 Uncharacterized HTH-type transcriptional regulator BphR [P... 42.4 3e-08
P0CL10 Pyruvate dehydrogenase complex repressor [Salmonella typhi... 42.0 4e-08
E1W823 Pyruvate dehydrogenase complex repressor [Salmonella typhi... 42.0 4e-08
P0A2S3 Pyruvate dehydrogenase complex repressor [Salmonella typhi] 42.0 4e-08
Q9X9E0 Exu regulon transcriptional regulator [Dickeya chrysanthemi] 42.0 5e-08
P0ACL9 Pyruvate dehydrogenase complex repressor [Escherichia coli... 40.4 1e-07
P0A8W0 HTH-type transcriptional repressor NanR [Escherichia coli ... 36.2 4e-06
>P46833 Gluconate operon transcriptional repressor [Bacillus licheniformis]
Length=243
Score = 54.7 bits (130), Expect = 2e-12
Identities = 46/210 (22%), Positives = 103/210 (49%), Gaps = 16/210 (8%)
Query 8 SLSEQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRR 67
S ++A + +II+G + G + E ++A E VSR +REAL +L +I + R
Sbjct 18 STGVRVACELRMRIISGLIESGTILSENKLAAEFSVSRSPIREALKILASEKIIRL-ERM 76
Query 68 GAIVSEMSSQQVKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAGDTEK 127
GA+V ++ +++ ++D +++ + +++ + L ++E + +K D ++
Sbjct 77 GAVVIGLTEKEIGEIYDVRLVMETFVFERLGRANVDELVTDLSKILEMMKVSIKYKDADE 136
Query 128 --FYDGIFEYLAQQHDMVMNAYLMKFYKELLPSLRRSYFLTLNTSRRELQEALALFKLVT 185
F D +F + + ++Y++ + L P + L++ R L+E F+ +
Sbjct 137 FSFQDVLFHETIVR--SINHSYILMIWNNLKPVMESFILLSM---RARLKEKYEDFERIL 191
Query 186 DAILIRKSHQATLFMEDFCRHLRNLVLESL 215
D +H+ L+++ R+L+L+SL
Sbjct 192 D------NHE--LYIKAIKTKDRDLMLKSL 213
>O05494 Uncharacterized HTH-type transcriptional regulator YdhC
[Bacillus subtilis (strain 168)]
Length=224
Score = 53.9 bits (128), Expect = 3e-12
Identities = 50/211 (24%), Positives = 98/211 (46%), Gaps = 14/211 (7%)
Query 12 QIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRRGAIV 71
Q + + I G GERI E ++AK VSR +REA+ LLE+ L++ R G +
Sbjct 15 QFYNQLKKMIFNGTFKPGERINETQLAKSFGVSRSPIREAMRLLEKDGLLKADDRNGFSI 74
Query 72 SEMSSQQVKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAG--DTE--- 126
+ ++++ V ++ + + V+ + + E L+ +E+ + + G DTE
Sbjct 75 TSLTAKDVDEIYKIRIPLEQLAVELVIDEADEEELTILEKQLEETEKAIHNGTEDTEIIR 134
Query 127 ---KFYDGIFEYLAQQHDMVMNAYLMKFYKELLPSLRRSYFLTLNTSRRELQEALALFKL 183
KF++ + ++ +H + N L++ +L+ R + + + L+E +F+
Sbjct 135 LNQKFHELLVDFSHNRH--LKN--LLEHVNDLIHFCRILNYTGDHRAETILREHRRIFEE 190
Query 184 VTDAIL-IRKSHQATLFMEDFCRHLRNLVLE 213
V K H F D C HL++++ E
Sbjct 191 VKKKNKEAAKQHVLAHFNHD-CEHLKHVLEE 220
>P10585 Gluconate operon transcriptional repressor [Bacillus subtilis
(strain 168)]
Length=243
Score = 53.1 bits (126), Expect = 7e-12
Identities = 40/175 (23%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query 8 SLSEQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRR 67
S ++A + +I++G + G + E IA E VSR VREAL +L +I + R
Sbjct 18 STGVRVAYELRMRIVSGLIESGTILSENTIAAEFSVSRSPVREALKILASEKIIRL-ERM 76
Query 68 GAIVSEMSSQQVKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAGDTEK 127
GA+V ++ +++ ++D +L+ + +++ + + L ++E + +K D ++
Sbjct 77 GAVVIGLTEKKIAEIYDVRLLLETFVFERLVKIDIEPLVKDLSKILEMMKVSIKYEDADE 136
Query 128 --FYDGIFEYLAQQHDMVMNA----YLMKFYKELLPSLRRSYFLTLNTSRRELQE 176
F D +F H+ ++ A Y+ + L P + L++ +E E
Sbjct 137 FSFQDVLF------HETIIRAIDHSYIQMIWNNLKPVMESFILLSMRVRLKEKYE 185
>P76114 HTH-type transcriptional regulator McbR [Escherichia coli
(strain K12)]
Length=221
Score = 47.0 bits (110), Expect = 8e-10
Identities = 31/124 (25%), Positives = 63/124 (51%), Gaps = 8/124 (6%)
Query 8 SLSEQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRR 67
SL+ Q+ + Q+ G L G R+ +A++L +S VREALL L + + + P +
Sbjct 11 SLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQ 70
Query 68 GAIVSEMSSQQVKAL----FDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAG 123
V E+ +Q+ + ++ ++ + V+ ++ + +LQ L+E+L + + G
Sbjct 71 AFTVPEVGKRQLDEINRIRYELELMAVALAVENLTP----QDLAELQELLEKLQQAQEKG 126
Query 124 DTEK 127
D E+
Sbjct 127 DMEQ 130
>P32425 Uncharacterized HTH-type transcriptional regulator in
unstable DNA locus [Streptomyces ambofaciens]
Length=236
Score = 47.0 bits (110), Expect = 9e-10
Identities = 33/112 (29%), Positives = 58/112 (52%), Gaps = 4/112 (4%)
Query 19 EQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRRGAIVSEMSSQQ 78
+ ++T EL G + E +A + VSR VRE+L+LL + L+++FP+ G+ VS + +
Sbjct 19 QMVLTLELAPGAALSENELAASMGVSRTPVRESLILLAQEGLVQVFPKIGSFVSRVDPAR 78
Query 79 V-KALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAGDTEKFY 129
V A F + LG + +E E +L+ Q + + D E+F+
Sbjct 79 VADAQFLREAVELGSLDALPAELDPAVVGELRDNLVRQGRKDL---DLEEFF 127
>P9WMG9 Uncharacterized HTH-type transcriptional regulator Rv0043c
[Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)]
Length=244
Score = 45.4 bits (106), Expect = 3e-09
Identities = 36/164 (22%), Positives = 71/164 (43%), Gaps = 3/164 (2%)
Query 11 EQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRRGAI 70
+Q+ HI ++TG+L G+R+ IA L VSR ++EAL+ LE ++ RGA
Sbjct 11 DQVVAHILNLLLTGKLRSGDRVDRNEIAHGLGVSRVPIQEALVQLEHDGIVSTRYHRGAF 70
Query 71 VSEMSSQQVKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAGDTEKFYD 130
+ + + L+ G + + + QL ++ L + ++ F +
Sbjct 71 IERFDVATILEHHELDGLLNGIASARAAANPTPRILGQLDAVMRSLR---NSKESRAFAE 127
Query 131 GIFEYLAQQHDMVMNAYLMKFYKELLPSLRRSYFLTLNTSRREL 174
++EY +D L + + R +++T SR ++
Sbjct 128 CVWEYRRTVNDEYAGPRLHATIRASQNLIPRVFWMTYQNSRDDV 171
>P9WMG8 Uncharacterized HTH-type transcriptional regulator MT0049
[Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)]
Length=244
Score = 45.4 bits (106), Expect = 3e-09
Identities = 36/164 (22%), Positives = 71/164 (43%), Gaps = 3/164 (2%)
Query 11 EQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRRGAI 70
+Q+ HI ++TG+L G+R+ IA L VSR ++EAL+ LE ++ RGA
Sbjct 11 DQVVAHILNLLLTGKLRSGDRVDRNEIAHGLGVSRVPIQEALVQLEHDGIVSTRYHRGAF 70
Query 71 VSEMSSQQVKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAGDTEKFYD 130
+ + + L+ G + + + QL ++ L + ++ F +
Sbjct 71 IERFDVATILEHHELDGLLNGIASARAAANPTPRILGQLDAVMRSLR---NSKESRAFAE 127
Query 131 GIFEYLAQQHDMVMNAYLMKFYKELLPSLRRSYFLTLNTSRREL 174
++EY +D L + + R +++T SR ++
Sbjct 128 CVWEYRRTVNDEYAGPRLHATIRASQNLIPRVFWMTYQNSRDDV 171
>P67738 Uncharacterized HTH-type transcriptional regulator Mb0044c
[Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)]
Length=244
Score = 45.4 bits (106), Expect = 3e-09
Identities = 36/164 (22%), Positives = 71/164 (43%), Gaps = 3/164 (2%)
Query 11 EQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRRGAI 70
+Q+ HI ++TG+L G+R+ IA L VSR ++EAL+ LE ++ RGA
Sbjct 11 DQVVAHILNLLLTGKLRSGDRVDRNEIAHGLGVSRVPIQEALVQLEHDGIVSTRYHRGAF 70
Query 71 VSEMSSQQVKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEHVKAGDTEKFYD 130
+ + + L+ G + + + QL ++ L + ++ F +
Sbjct 71 IERFDVATILEHHELDGLLNGIASARAAANPTPRILGQLDAVMRSLR---NSKESRAFAE 127
Query 131 GIFEYLAQQHDMVMNAYLMKFYKELLPSLRRSYFLTLNTSRREL 174
++EY +D L + + R +++T SR ++
Sbjct 128 CVWEYRRTVNDEYAGPRLHATIRASQNLIPRVFWMTYQNSRDDV 171
>P70790 Uncharacterized HTH-type transcriptional regulator in
the TAR-I ttuE-ttuC' intergenic region [Agrobacterium vitis]
Length=171
Score = 43.9 bits (102), Expect = 6e-09
Identities = 21/82 (26%), Positives = 44/82 (54%), Gaps = 0/82 (0%)
Query 17 IGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIFPRRGAIVSEMSS 76
I I T G + E+ IA++L +SR V EA+ L+ L+ I P++G I+ +S
Sbjct 40 IRNAIRTNVFPPGYQAAEIEIARQLGMSRTPVHEAMARLQEDGLVRILPKKGIIICALSP 99
Query 77 QQVKALFDSSVLVLGHIVQKIS 98
++ +++ ++ + G +++
Sbjct 100 ADIEEIYEVTIALEGAAASRLA 121
>P9WMG4 HTH-type transcriptional regulator Mce2R [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=240
Score = 42.4 bits (98), Expect = 3e-08
Identities = 41/159 (26%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query 8 SLSEQIARHIGEQIITGELVEGERI-QELRIAKELDVSRGSVREALLLLERTHLIEIFPR 66
S+ E++ I ++TGE+ GE + E R+A+ L VSR +VREAL L L+E+ R
Sbjct 10 SVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEV--R 67
Query 67 RGAIVSEMSSQQ-------VKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEH 119
+G + + ++ + LF + L + +V+ I E+ R+ ++ L + NE
Sbjct 68 QGDVTTVRDFRRHAGLDLLPRLLFRNGELDIS-VVRSILEA-RLRNFPKVAELAAERNEP 125
Query 120 VKAGDTEKFYDGIFEYLAQQHDMVMNAYLMKFYKELLPS 158
A E D + ++ +V + + F+ ++ S
Sbjct 126 ELA---ELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDS 161
>P67742 Uncharacterized HTH-type transcriptional regulator Mb0601
[Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)]
Length=240
Score = 42.4 bits (98), Expect = 3e-08
Identities = 41/159 (26%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query 8 SLSEQIARHIGEQIITGELVEGERI-QELRIAKELDVSRGSVREALLLLERTHLIEIFPR 66
S+ E++ I ++TGE+ GE + E R+A+ L VSR +VREAL L L+E+ R
Sbjct 10 SVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEV--R 67
Query 67 RGAIVSEMSSQQ-------VKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEH 119
+G + + ++ + LF + L + +V+ I E+ R+ ++ L + NE
Sbjct 68 QGDVTTVRDFRRHAGLDLLPRLLFRNGELDIS-VVRSILEA-RLRNFPKVAELAAERNEP 125
Query 120 VKAGDTEKFYDGIFEYLAQQHDMVMNAYLMKFYKELLPS 158
A E D + ++ +V + + F+ ++ S
Sbjct 126 ELA---ELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDS 161
>P9WMG5 HTH-type transcriptional regulator Mce2R [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=240
Score = 42.4 bits (98), Expect = 3e-08
Identities = 41/159 (26%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query 8 SLSEQIARHIGEQIITGELVEGERI-QELRIAKELDVSRGSVREALLLLERTHLIEIFPR 66
S+ E++ I ++TGE+ GE + E R+A+ L VSR +VREAL L L+E+ R
Sbjct 10 SVPEEVFEQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEV--R 67
Query 67 RGAIVSEMSSQQ-------VKALFDSSVLVLGHIVQKISESWRVHEAEQLQHLIEQLNEH 119
+G + + ++ + LF + L + +V+ I E+ R+ ++ L + NE
Sbjct 68 QGDVTTVRDFRRHAGLDLLPRLLFRNGELDIS-VVRSILEA-RLRNFPKVAELAAERNEP 125
Query 120 VKAGDTEKFYDGIFEYLAQQHDMVMNAYLMKFYKELLPS 158
A E D + ++ +V + + F+ ++ S
Sbjct 126 ELA---ELLQDSLRALDTEEDPIVWQRHTLDFWDHVVDS 161
>P37335 Uncharacterized HTH-type transcriptional regulator BphR
[Paraburkholderia xenovorans (strain LB400)]
Length=245
Score = 42.4 bits (98), Expect = 3e-08
Identities = 25/78 (32%), Positives = 41/78 (53%), Gaps = 0/78 (0%)
Query 5 DIESLSEQIARHIGEQIITGELVEGERIQELRIAKELDVSRGSVREALLLLERTHLIEIF 64
++ SL E + + I+ G L G R+ + +VS G+VREAL LL +L++
Sbjct 27 NVRSLIEATFQRLRADIVEGRLAAGSRLAIEDLKSRYEVSGGTVREALSLLVANNLVQTQ 86
Query 65 PRRGAIVSEMSSQQVKAL 82
+RG V+ MS ++ L
Sbjct 87 AQRGFHVTPMSLDDMRDL 104
>P0CL10 Pyruvate dehydrogenase complex repressor [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=254
Score = 42.0 bits (97), Expect = 4e-08
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 29/249 (12%)
Query 9 LSEQIARHIGEQIITGELVEGERIQ-ELRIAKELDVSRGSVREALLLLERTHLIEIFPRR 67
LS+ I + + I+ G L GE++ E +AK+ DVSR S+REA+ LE L+
Sbjct 11 LSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGG 70
Query 68 GAIVS------------EMSSQQVKALFDSSVLVLGHIVQKISESWRV--------HEAE 107
G V E+ S ++ FD +L H ++ I+ +
Sbjct 71 GTFVQSSLWQSFSDPLVELLSDHPESQFD--LLETRHALEGIAAYYAALRSTDEDKDRIR 128
Query 108 QLQHLIEQLNEHVKAGDTEKFYDGIFEYLAQQHDMVMNAYLMKFYKELLPSLRRS--YFL 165
+L H IE E +GD + + + +Y + N L+ + + P L ++
Sbjct 129 ELHHAIELAQE---SGDLDAESEAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNF 185
Query 166 TLNTSRRELQEALALFKL-VTDAILIRKSHQATLFMEDFCRHLRNLVLESLTRMKQIELA 224
L +RRE+ ++ + + +AI+ K +A + ++L+ + E A
Sbjct 186 ELLYARREMLPLVSTHRTRIFEAIMAGKPEEAREASHRHLAFIEEIMLDRSREESRRERA 245
Query 225 WARRSRRSS 233
R +R +
Sbjct 246 LRRLEQRKN 254
>E1W823 Pyruvate dehydrogenase complex repressor [Salmonella typhimurium
(strain SL1344)]
Length=254
Score = 42.0 bits (97), Expect = 4e-08
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 29/249 (12%)
Query 9 LSEQIARHIGEQIITGELVEGERIQ-ELRIAKELDVSRGSVREALLLLERTHLIEIFPRR 67
LS+ I + + I+ G L GE++ E +AK+ DVSR S+REA+ LE L+
Sbjct 11 LSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGG 70
Query 68 GAIVS------------EMSSQQVKALFDSSVLVLGHIVQKISESWRV--------HEAE 107
G V E+ S ++ FD +L H ++ I+ +
Sbjct 71 GTFVQSSLWQSFSDPLVELLSDHPESQFD--LLETRHALEGIAAYYAALRSTDEDKDRIR 128
Query 108 QLQHLIEQLNEHVKAGDTEKFYDGIFEYLAQQHDMVMNAYLMKFYKELLPSLRRS--YFL 165
+L H IE E +GD + + + +Y + N L+ + + P L ++
Sbjct 129 ELHHAIELAQE---SGDLDAESEAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNF 185
Query 166 TLNTSRRELQEALALFKL-VTDAILIRKSHQATLFMEDFCRHLRNLVLESLTRMKQIELA 224
L +RRE+ ++ + + +AI+ K +A + ++L+ + E A
Sbjct 186 ELLYARREMLPLVSTHRTRIFEAIMAGKPEEAREASHRHLAFIEEIMLDRSREESRRERA 245
Query 225 WARRSRRSS 233
R +R +
Sbjct 246 LRRLEQRKN 254
>P0A2S3 Pyruvate dehydrogenase complex repressor [Salmonella typhi]
Length=254
Score = 42.0 bits (97), Expect = 4e-08
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 29/249 (12%)
Query 9 LSEQIARHIGEQIITGELVEGERIQ-ELRIAKELDVSRGSVREALLLLERTHLIEIFPRR 67
LS+ I + + I+ G L GE++ E +AK+ DVSR S+REA+ LE L+
Sbjct 11 LSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGG 70
Query 68 GAIVS------------EMSSQQVKALFDSSVLVLGHIVQKISESWRV--------HEAE 107
G V E+ S ++ FD +L H ++ I+ +
Sbjct 71 GTFVQSSLWQSFSDPLVELLSDHPESQFD--LLETRHALEGIAAYYAALRSTDEDKDRIR 128
Query 108 QLQHLIEQLNEHVKAGDTEKFYDGIFEYLAQQHDMVMNAYLMKFYKELLPSLRRS--YFL 165
+L H IE E +GD + + + +Y + N L+ + + P L ++
Sbjct 129 ELHHAIELAQE---SGDLDAESEAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNF 185
Query 166 TLNTSRRELQEALALFKL-VTDAILIRKSHQATLFMEDFCRHLRNLVLESLTRMKQIELA 224
L +RRE+ ++ + + +AI+ K +A + ++L+ + E A
Sbjct 186 ELLYARREMLPLVSTHRTRIFEAIMAGKPEEAREASHRHLAFIEEIMLDRSREESRRERA 245
Query 225 WARRSRRSS 233
R +R +
Sbjct 246 LRRLEQRKN 254
>Q9X9E0 Exu regulon transcriptional regulator [Dickeya chrysanthemi]
Length=259
Score = 42.0 bits (97), Expect = 5e-08
Identities = 26/79 (33%), Positives = 49/79 (62%), Gaps = 3/79 (4%)
Query 1 MNLDDIESLSEQIARHIGEQIITGELVEGERIQ-ELRIAKELDVSRGSVREALLLLERTH 59
M L + L +Q+A + ++I G G+++ E I++E++VSR VREA+++LE
Sbjct 1 MALTESRRLYQQLAAELKQRIENGVYPVGDKLPAERNISEEMNVSRTVVREAIIMLEVEG 60
Query 60 LIEIFPRRGAIVSEMSSQQ 78
+E+ R+G+ + +S+QQ
Sbjct 61 YVEV--RKGSGIHVISNQQ 77
>P0ACL9 Pyruvate dehydrogenase complex repressor [Escherichia
coli (strain K12)]
Length=254
Score = 40.4 bits (93), Expect = 1e-07
Identities = 53/244 (22%), Positives = 103/244 (42%), Gaps = 19/244 (8%)
Query 9 LSEQIARHIGEQIITGELVEGERIQ-ELRIAKELDVSRGSVREALLLLERTHLIEIFPRR 67
LS+ I + + I+ G L GE++ E +AK+ DVSR S+REA+ LE L+
Sbjct 11 LSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGG 70
Query 68 GAIV-----SEMSSQQVKALFDS-----SVLVLGHIVQKISESWRV-----HEAEQLQHL 112
G V S V+ L D +L H ++ I+ + + E+++ L
Sbjct 71 GTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRSTDEDKERIREL 130
Query 113 IEQLNEHVKAGDTEKFYDGIFEYLAQQHDMVMNAYLMKFYKELLPSLRRS--YFLTLNTS 170
+ ++GD + + + +Y + N L+ + + P L ++ L S
Sbjct 131 HHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYS 190
Query 171 RRELQEALALFKL-VTDAILIRKSHQATLFMEDFCRHLRNLVLESLTRMKQIELAWARRS 229
RRE+ ++ + + +AI+ K +A + ++L+ + E + R
Sbjct 191 RREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREESRRERSLRRLE 250
Query 230 RRSS 233
+R +
Sbjct 251 QRKN 254
>P0A8W0 HTH-type transcriptional repressor NanR [Escherichia coli
(strain K12)]
Length=263
Score = 36.2 bits (82), Expect = 4e-06
Identities = 25/74 (34%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query 7 ESLSEQIARHIGEQIITGELVEGERI-QELRIAKELDVSRGSVREALLLLERTHLIEIFP 65
+ LSE + + + I E EGE++ E + +V R SVREAL L+R L++I
Sbjct 30 KKLSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINN 89
Query 66 RRGAIVSEMSSQQV 79
A VS S+ +
Sbjct 90 GERARVSRPSADTI 103
Lambda K H a alpha
0.325 0.137 0.378 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 724908
Database: 1d1513d3e167286d91669eebb097aa2f.SwissProt.fasta
Posted date: May 9, 2024 6:36 PM
Number of letters in database: 4,573
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
