BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1f8b744c910be8a790cc386912a88fa0.SwissProt.fasta
9 sequences; 3,923 total letters
Query= ACIAD0873
Length=159
Score E
Sequences producing significant alignments: (Bits) Value
P0ADE7 Potassium binding protein Kbp [Escherichia coli O6:H1 (str... 136 2e-45
P0ADE6 Potassium binding protein Kbp [Escherichia coli (strain K12)] 136 2e-45
Q9RVY3 Uncharacterized protein DR_0888 [Deinococcus radiodurans (... 52.8 2e-12
P54421 Probable peptidoglycan endopeptidase LytE [Bacillus subtil... 34.7 5e-06
P9WM38 Esterase MT1326 [Mycobacterium tuberculosis (strain CDC 15... 34.3 7e-06
P9WM39 Esterase Rv1288 [Mycobacterium tuberculosis (strain ATCC 2... 34.3 7e-06
Q8F1W7 DNA translocase FtsK [Leptospira interrogans serogroup Ict... 33.9 1e-05
Q72TG0 DNA translocase FtsK [Leptospira interrogans serogroup Ict... 33.9 1e-05
Q4L5Q6 Orotidine 5'-phosphate decarboxylase [Staphylococcus haemo... 32.7 2e-05
>P0ADE7 Potassium binding protein Kbp [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=149
Score = 136 bits (343), Expect = 2e-45
Identities = 77/156 (49%), Positives = 97/156 (62%), Gaps = 8/156 (5%)
Query 1 MGLFDFVKGIGKKNQAKVEQTTTPASTEPTAQEVANQLLAHVQSLGLPIDGLVVNYNSTT 60
MGLF+FVK G+K V + + + A ++ H+ G+P D VN
Sbjct 1 MGLFNFVKDAGEKLWDAV-------TGQHDKDDQAKKVQEHLNKTGIP-DADKVNIQIAD 52
Query 61 DLATIQGKVKSQADKEKIILAVGNIDHVAKVDDQMTVETPEPESKFYTVKAGDNLSKISK 120
AT+ G SQ KEKI++AVGNI +A VDDQ+ TP S+FYTVK+GD LS ISK
Sbjct 53 GKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVKSGDTLSAISK 112
Query 121 EYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRIPQ 156
+ YG+ N YNKIFEANKP+LK D IYPGQVLRIP+
Sbjct 113 QVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPE 148
>P0ADE6 Potassium binding protein Kbp [Escherichia coli (strain
K12)]
Length=149
Score = 136 bits (343), Expect = 2e-45
Identities = 77/156 (49%), Positives = 97/156 (62%), Gaps = 8/156 (5%)
Query 1 MGLFDFVKGIGKKNQAKVEQTTTPASTEPTAQEVANQLLAHVQSLGLPIDGLVVNYNSTT 60
MGLF+FVK G+K V + + + A ++ H+ G+P D VN
Sbjct 1 MGLFNFVKDAGEKLWDAV-------TGQHDKDDQAKKVQEHLNKTGIP-DADKVNIQIAD 52
Query 61 DLATIQGKVKSQADKEKIILAVGNIDHVAKVDDQMTVETPEPESKFYTVKAGDNLSKISK 120
AT+ G SQ KEKI++AVGNI +A VDDQ+ TP S+FYTVK+GD LS ISK
Sbjct 53 GKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVKSGDTLSAISK 112
Query 121 EYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRIPQ 156
+ YG+ N YNKIFEANKP+LK D IYPGQVLRIP+
Sbjct 113 QVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPE 148
>Q9RVY3 Uncharacterized protein DR_0888 [Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)]
Length=253
Score = 52.8 bits (125), Expect = 2e-12
Identities = 32/68 (47%), Positives = 40/68 (59%), Gaps = 8/68 (12%)
Query 88 VAKVDDQMTVETPEPESKFYTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIY 147
+AK D+ T +T YTVK GD+LSKI++ YYGD Y KI N + + D I
Sbjct 193 LAKDKDEDTGDT------VYTVKPGDSLSKIAEHYYGDQMEYKKIAHYNN--ISNPDLIQ 244
Query 148 PGQVLRIP 155
PGQ LRIP
Sbjct 245 PGQKLRIP 252
>P54421 Probable peptidoglycan endopeptidase LytE [Bacillus subtilis
(strain 168)]
Length=334
Score = 34.7 bits (78), Expect = 5e-06
Identities = 27/91 (30%), Positives = 39/91 (43%), Gaps = 6/91 (7%)
Query 64 TIQGKVKSQADKEKIILAVGNIDHVAKVDDQMTVETPEPESKFYTVKAGDNLSKISKEYY 123
T K+KS+ I+ VG + + S Y VK+GD+L KISK+Y
Sbjct 45 TTISKIKSENHLRSDIIYVGQTLSINGKSTSSKSSSSSSSSSTYKVKSGDSLWKISKKYG 104
Query 124 GDPNHYNKIFEANKPLLKDADDIYPGQVLRI 154
N K+ LL+ GQVL++
Sbjct 105 MTINELKKLNGLKSDLLR------VGQVLKL 129
Score = 27.3 bits (59), Expect = 0.001
Identities = 20/48 (42%), Positives = 29/48 (60%), Gaps = 6/48 (13%)
Query 107 YTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRI 154
Y VK+GD+LSKI+ +Y +K+ N LK +D IY QVL++
Sbjct 151 YKVKSGDSLSKIASKY---GTTVSKLKSLNG--LK-SDVIYVNQVLKV 192
>P9WM38 Esterase MT1326 [Mycobacterium tuberculosis (strain CDC
1551 / Oshkosh)]
Length=456
Score = 34.3 bits (77), Expect = 7e-06
Identities = 22/53 (42%), Positives = 28/53 (53%), Gaps = 2/53 (4%)
Query 102 PESKFYTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRI 154
P+ YTV AGD LS ++ +YGD + Y I N + D I GQVL I
Sbjct 102 PDFTRYTVVAGDTLSALAARFYGDASLYPLIAAVNG--IADPGVIDVGQVLVI 152
Score = 31.6 bits (70), Expect = 6e-05
Identities = 20/56 (36%), Positives = 29/56 (52%), Gaps = 2/56 (4%)
Query 102 PESKFYTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRIPQY 157
P+ YTV AGD LS ++ +YGD I A+ + D D + GQ L +P +
Sbjct 51 PDFTRYTVVAGDTLSALALRFYGDAELNWLIAAASG--IADPDVVNVGQRLIMPDF 104
Score = 30.0 bits (66), Expect = 2e-04
Identities = 17/51 (33%), Positives = 27/51 (53%), Gaps = 2/51 (4%)
Query 107 YTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRIPQY 157
+ V AG+ LS ++ +YGD Y I A+ + D D + GQ L +P +
Sbjct 5 HAVVAGETLSALALRFYGDAELYRLIAAASG--IADPDVVNVGQRLIMPDF 53
>P9WM39 Esterase Rv1288 [Mycobacterium tuberculosis (strain ATCC
25618 / H37Rv)]
Length=456
Score = 34.3 bits (77), Expect = 7e-06
Identities = 22/53 (42%), Positives = 28/53 (53%), Gaps = 2/53 (4%)
Query 102 PESKFYTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRI 154
P+ YTV AGD LS ++ +YGD + Y I N + D I GQVL I
Sbjct 102 PDFTRYTVVAGDTLSALAARFYGDASLYPLIAAVNG--IADPGVIDVGQVLVI 152
Score = 31.6 bits (70), Expect = 6e-05
Identities = 20/56 (36%), Positives = 29/56 (52%), Gaps = 2/56 (4%)
Query 102 PESKFYTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRIPQY 157
P+ YTV AGD LS ++ +YGD I A+ + D D + GQ L +P +
Sbjct 51 PDFTRYTVVAGDTLSALALRFYGDAELNWLIAAASG--IADPDVVNVGQRLIMPDF 104
Score = 30.0 bits (66), Expect = 2e-04
Identities = 17/51 (33%), Positives = 27/51 (53%), Gaps = 2/51 (4%)
Query 107 YTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRIPQY 157
+ V AG+ LS ++ +YGD Y I A+ + D D + GQ L +P +
Sbjct 5 HAVVAGETLSALALRFYGDAELYRLIAAASG--IADPDVVNVGQRLIMPDF 53
>Q8F1W7 DNA translocase FtsK [Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601)]
Length=948
Score = 33.9 bits (76), Expect = 1e-05
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 0/84 (0%)
Query 32 QEVANQLLAHVQSLGLPIDGLVVNYNSTTDLATIQGKVKSQADKEKIILAVGNIDHVAKV 91
+E+ Q Q + + ++ Y T L G++ S +D+ ++ LAV NI VA +
Sbjct 517 EEIIRQYGYESQVVSMERGPIITRYELTPPLGVKLGRITSLSDELRLYLAVKNIRIVAPI 576
Query 92 DDQMTVETPEPESKFYTVKAGDNL 115
+ T+ P S V GD L
Sbjct 577 PGKSTIGIEVPNSIREDVFLGDIL 600
>Q72TG0 DNA translocase FtsK [Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)]
Length=948
Score = 33.9 bits (76), Expect = 1e-05
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 0/84 (0%)
Query 32 QEVANQLLAHVQSLGLPIDGLVVNYNSTTDLATIQGKVKSQADKEKIILAVGNIDHVAKV 91
+E+ Q Q + + ++ Y T L G++ S +D+ ++ LAV NI VA +
Sbjct 517 EEIIRQYGYESQVVSMERGPIITRYELTPPLGVKLGRITSLSDELRLYLAVKNIRIVAPI 576
Query 92 DDQMTVETPEPESKFYTVKAGDNL 115
+ T+ P S V GD L
Sbjct 577 PGKSTIGIEVPNSIREDVFLGDIL 600
>Q4L5Q6 Orotidine 5'-phosphate decarboxylase [Staphylococcus haemolyticus
(strain JCSC1435)]
Length=230
Score = 32.7 bits (73), Expect = 2e-05
Identities = 29/105 (28%), Positives = 46/105 (44%), Gaps = 17/105 (16%)
Query 7 VKGIGK-KNQAKVEQTTTPASTEPTAQEVANQLLAHVQSLGLPIDGLVVNYNSTTDLATI 65
V+G+ K N K+ T ST ++L + Q++ I+ V+NY + T A +
Sbjct 98 VRGLHKYSNDTKIIAVTQLTST-------TEEMLRNEQNIQTTIEEAVLNYATLTQQAGL 150
Query 66 QGKVKSQADKEKIILAVGNI---------DHVAKVDDQMTVETPE 101
G V S + E + +G+ A VDDQ + TPE
Sbjct 151 DGVVCSPLEAELLTNKLGSNFLKVTPGIRPQGAAVDDQKRITTPE 195
Lambda K H a alpha
0.316 0.134 0.380 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 428640
Database: 1f8b744c910be8a790cc386912a88fa0.SwissProt.fasta
Posted date: May 20, 2024 12:26 AM
Number of letters in database: 3,923
Number of sequences in database: 9
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
