Comparative Genomics

ACIAD0917 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 44f172f1fca1d20ad8d8a542790935a7.TrEMBL.fasta
           13 sequences; 5,203 total letters



Query= ACIAD0917

Length=417
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SB48 Nuclease SbcCD subunit D [Acinetobacter sp]                843     0.0  
Q6FDP5 Nuclease SbcCD subunit D [Acinetobacter baylyi (strain ATC...  843     0.0  
N9DHQ8 Nuclease SbcCD subunit D [Acinetobacter ursingii ANC 3649]     736     0.0  
A0A3R9BWU2 Nuclease SbcCD subunit D [Acinetobacter sp. FDAARGOS_515]  736     0.0  
A0A7T9Z889 Nuclease SbcCD subunit D [Acinetobacter ursingii]          734     0.0  
A0A3A8ET60 Nuclease SbcCD subunit D [Acinetobacter guerrae]           733     0.0  
A0A3D2SLZ2 Nuclease SbcCD subunit D [Acinetobacter ursingii]          733     0.0  
A0A009Z8Z8 Nuclease SbcCD subunit D [Acinetobacter sp. 479375]        732     0.0  
A0A3L9M0Y3 Nuclease SbcCD subunit D [Acinetobacter sp. 2JN-4]         732     0.0  
A0A4Q6XK79 Nuclease SbcCD subunit D [Acinetobacter halotolerans]      731     0.0  
N8R5P7 Nuclease SbcCD subunit D [Acinetobacter sp. CIP-A165]          731     0.0  
Q8L2H8 Nuclease SbcCD subunit D [Streptococcus thermophilus (stra...  59.7    1e-13
Q9X1X0 Nuclease SbcCD subunit D [Thermotoga maritima (strain ATCC...  55.5    1e-11


>A0A7G2SB48 Nuclease SbcCD subunit D [Acinetobacter sp]
Length=416

 Score = 843 bits (2179),  Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%), Gaps = 0/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ
Sbjct  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL
Sbjct  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK
Sbjct  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP
Sbjct  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI  300
            HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI  300

Query  301  QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD  360
            QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD
Sbjct  301  QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD  360

Query  361  NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHKY  416
            NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHKY
Sbjct  361  NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHKY  416


>Q6FDP5 Nuclease SbcCD subunit D [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=416

 Score = 843 bits (2179),  Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%), Gaps = 0/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ
Sbjct  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL
Sbjct  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK
Sbjct  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP
Sbjct  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI  300
            HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI  300

Query  301  QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD  360
            QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD
Sbjct  301  QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD  360

Query  361  NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHKY  416
            NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHKY
Sbjct  361  NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHKY  416


>N9DHQ8 Nuclease SbcCD subunit D [Acinetobacter ursingii ANC 3649]
Length=417

 Score = 736 bits (1901),  Expect = 0.0
 Identities = 361/416 (87%), Positives = 383/416 (92%), Gaps = 1/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFL WLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLTWLLEQIKQKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH LAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWNEDKTL
Sbjct  61   AQKQLYQFLADAHQLAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNEDKTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NL+RLILP+YDE K +VAWCIALPFLRSAEITGFN+ T NSQ+AIAYLHEQLI+EAKRRK
Sbjct  121  NLDRLILPIYDEQKQIVAWCIALPFLRSAEITGFNDQTTNSQNAIAYLHEQLIAEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            T DQAIILMSHAHMQGGETSDSERPIIIGNEEALST LF+D IDYVALGHLHKPQKV   
Sbjct  181  THDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDGIDYVALGHLHKPQKVGQT  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDK-FQFEAIEIPRSIKLHKIRGELNEV  299
            HIRYSGSPIPLSFSEINYKHQVV+V I P Q  D  FQFEA+EIPRS++LHKIRGEL EV
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVTIHPEQKDDPYFQFEALEIPRSVQLHKIRGELTEV  300

Query  300  IQQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQ  359
            +QQLKSL    IESID REYIDIEYHTLTPP PNLRQQFE+ALPP RYRLVRISRQYLS 
Sbjct  301  MQQLKSLPSEVIESIDQREYIDIEYHTLTPPQPNLRQQFENALPPDRYRLVRISRQYLST  360

Query  360  DNNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
            +N+A Q  +I+LEPPTPEKLF+QIW+KKGYHADD+VKKDFMSLVAQAQQQLEDQHK
Sbjct  361  ENSAEQQQQIHLEPPTPEKLFQQIWEKKGYHADDEVKKDFMSLVAQAQQQLEDQHK  416


>A0A3R9BWU2 Nuclease SbcCD subunit D [Acinetobacter sp. FDAARGOS_515]
Length=417

 Score = 736 bits (1901),  Expect = 0.0
 Identities = 361/416 (87%), Positives = 383/416 (92%), Gaps = 1/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFL WLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLTWLLEQIKQKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH LAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWNEDKTL
Sbjct  61   AQKQLYQFLADAHQLAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNEDKTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NL+RLILP+YDE K +VAWCIALPFLRSAEITGFN+ T NSQ+AIAYLHEQLI+EAKRRK
Sbjct  121  NLDRLILPIYDEQKQIVAWCIALPFLRSAEITGFNDQTTNSQNAIAYLHEQLIAEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            T DQAIILMSHAHMQGGETSDSERPIIIGNEEALST LF+D IDYVALGHLHKPQKV   
Sbjct  181  THDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDGIDYVALGHLHKPQKVGQT  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDK-FQFEAIEIPRSIKLHKIRGELNEV  299
            HIRYSGSPIPLSFSEINYKHQVV+V I P Q  D  FQFEA+EIPRS++LHKIRGEL EV
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVTIHPEQKDDPYFQFEALEIPRSVQLHKIRGELTEV  300

Query  300  IQQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQ  359
            +QQLKSL    IESID REYIDIEYHTLTPP PNLRQQFE+ALPP RYRLVRISRQYLS 
Sbjct  301  MQQLKSLPSEVIESIDQREYIDIEYHTLTPPQPNLRQQFENALPPDRYRLVRISRQYLST  360

Query  360  DNNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
            +N+A Q  +I+LEPPTPEKLF+QIW+KKGYHADD+VKKDFMSLVAQAQQQLEDQHK
Sbjct  361  ENSAEQQQQIHLEPPTPEKLFQQIWEKKGYHADDEVKKDFMSLVAQAQQQLEDQHK  416


>A0A7T9Z889 Nuclease SbcCD subunit D [Acinetobacter ursingii]
Length=421

 Score = 734 bits (1895),  Expect = 0.0
 Identities = 358/416 (86%), Positives = 383/416 (92%), Gaps = 1/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFL WLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  5    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLTWLLEQIKQKQPHALLIAGDIFDVINPSSQ  64

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH LAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWNEDKTL
Sbjct  65   AQKQLYQFLADAHQLAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNEDKTL  124

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NL+RLILP+YDE K +VAWCIALPFLRSAEITGFN+ T NSQ+AIAYLHEQLI+EAKRRK
Sbjct  125  NLDRLILPIYDEQKQIVAWCIALPFLRSAEITGFNDQTTNSQNAIAYLHEQLIAEAKRRK  184

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            T DQAIILMSHAHMQGGETSDSERPIIIGNEEALST LF+D IDYVALGHLHKPQKV   
Sbjct  185  THDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDGIDYVALGHLHKPQKVGQT  244

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDK-FQFEAIEIPRSIKLHKIRGELNEV  299
            HIRYSGSPIPLSFSEINYKHQVV+V  +P Q  D  FQFEA+EIPRS++LHKIRGEL EV
Sbjct  245  HIRYSGSPIPLSFSEINYKHQVVEVTFNPEQKDDPYFQFEALEIPRSVQLHKIRGELTEV  304

Query  300  IQQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQ  359
            +QQLKSL    IESID REY+DIEYHTLTPP PNLRQQFEDALPP RYRLVRISRQYLS 
Sbjct  305  MQQLKSLPSEVIESIDQREYVDIEYHTLTPPQPNLRQQFEDALPPDRYRLVRISRQYLST  364

Query  360  DNNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
            +N+A Q  +I+LEPPTPEKLF+QIW+KKGYHADD+V+KDFMSLVAQAQQQLEDQH+
Sbjct  365  ENSAEQQQQIHLEPPTPEKLFQQIWEKKGYHADDEVQKDFMSLVAQAQQQLEDQHQ  420


>A0A3A8ET60 Nuclease SbcCD subunit D [Acinetobacter guerrae]
Length=417

 Score = 733 bits (1893),  Expect = 0.0
 Identities = 356/416 (86%), Positives = 387/416 (93%), Gaps = 1/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLEQIKNKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH LAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGV+RWNEDKTL
Sbjct  61   AQKQLYQFLADAHQLAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVVRWNEDKTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NL+RLILP+YDE K +VAWCIALPFLRSAEITGFNE+T+NSQ+AIAYLH+QLI+EAK RK
Sbjct  121  NLDRLILPIYDEKKQIVAWCIALPFLRSAEITGFNEYTSNSQNAIAYLHQQLIAEAKHRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            T+ QA+ILMSHAHMQGGETSDSERPIIIGNEEALST LF+D IDYVALGHLHKPQKV   
Sbjct  181  TEKQALILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDGIDYVALGHLHKPQKVGQT  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDK-FQFEAIEIPRSIKLHKIRGELNEV  299
            HIRYSGSPIPLSFSEINYKHQVV+V ++P Q  D  FQFEA+EIPRSI+LHKIRGELNEV
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVKVNPDQKDDPYFQFEALEIPRSIQLHKIRGELNEV  300

Query  300  IQQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQ  359
            +Q+LK+L    IESID REY+DIEYHTLTPP PNLRQQFEDALPP RYRLVRISRQYLS 
Sbjct  301  MQKLKNLPCDVIESIDQREYVDIEYHTLTPPQPNLRQQFEDALPPDRYRLVRISRQYLSL  360

Query  360  DNNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
            +N+A Q  +I+LEPPTPEKLF+QIW+KKGYHADD+V+KDFMSLV+QAQQQLEDQHK
Sbjct  361  ENSAEQQQQIHLEPPTPEKLFQQIWEKKGYHADDEVQKDFMSLVSQAQQQLEDQHK  416


>A0A3D2SLZ2 Nuclease SbcCD subunit D [Acinetobacter ursingii]
Length=417

 Score = 733 bits (1893),  Expect = 0.0
 Identities = 358/416 (86%), Positives = 382/416 (92%), Gaps = 1/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLEQIKQKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH LAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWNEDKTL
Sbjct  61   AQKQLYQFLADAHQLAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNEDKTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NL+RLILP+YDE K +VAWCIALPFLRSAEITGFN+ T NSQ+AIAYLHEQLI+EAKRRK
Sbjct  121  NLDRLILPIYDEQKQIVAWCIALPFLRSAEITGFNDQTTNSQNAIAYLHEQLIAEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            T DQAIILMSHAHMQGGETSDSERPIIIGNEEALST LF+D IDYVALGHLHKPQKV   
Sbjct  181  THDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDGIDYVALGHLHKPQKVGQT  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDK-FQFEAIEIPRSIKLHKIRGELNEV  299
            HIRYSGSPIPLSFSEINYKHQVV+V ++P Q     FQFEA+EIPRS++LHKIRGEL EV
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVTVNPDQKDGPYFQFEALEIPRSVQLHKIRGELTEV  300

Query  300  IQQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQ  359
            +QQLKSL    IESID REY+DIEYHTLTPP PNLRQQFEDALPP RYRLVRISRQYLS 
Sbjct  301  MQQLKSLPSEVIESIDQREYVDIEYHTLTPPRPNLRQQFEDALPPDRYRLVRISRQYLST  360

Query  360  DNNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
             N+A Q  +I+LEPPTPEKLF+QIW+KKGYHADD+VKKDFMSLVAQAQQQLED H+
Sbjct  361  QNSAVQQQQIHLEPPTPEKLFQQIWEKKGYHADDEVKKDFMSLVAQAQQQLEDSHQ  416


>A0A009Z8Z8 Nuclease SbcCD subunit D [Acinetobacter sp. 479375]
Length=417

 Score = 732 bits (1890),  Expect = 0.0
 Identities = 357/416 (86%), Positives = 382/416 (92%), Gaps = 1/416 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLG FFYNHSRHYEHEQFL WLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGHFFYNHSRHYEHEQFLTWLLEQIKQKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH LAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWNEDKTL
Sbjct  61   AQKQLYQFLADAHQLAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNEDKTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            NL+RLILP+YDE K +VAWCIALPFLRSAEITGFN+ T NSQ+AIAYLHEQLI+EAKRRK
Sbjct  121  NLDRLILPIYDEQKQIVAWCIALPFLRSAEITGFNDQTTNSQNAIAYLHEQLIAEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            T DQAIILMSHAHMQGGETSDSERPIIIGNEEALST LF+D IDYVALGHLHKPQKV   
Sbjct  181  THDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDGIDYVALGHLHKPQKVGQT  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDK-FQFEAIEIPRSIKLHKIRGELNEV  299
            HIRYSGSPIPLSFSEINYKHQVV+V  +P Q  D  FQFEA+EIPRS++LHKIRGEL EV
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVTFNPEQKDDPYFQFEALEIPRSVQLHKIRGELTEV  300

Query  300  IQQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQ  359
            +QQLKSL    IESID REY+DIEYHTLTPP PNLRQQFEDALPP RYRLVRISRQYLS 
Sbjct  301  MQQLKSLPSEVIESIDQREYVDIEYHTLTPPQPNLRQQFEDALPPDRYRLVRISRQYLST  360

Query  360  DNNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
            +N+A Q  +I+LEPPTPEKLF+QIW+KKGYHADD+V+KDFMSLVAQAQQQLEDQH+
Sbjct  361  ENSAEQQQQIHLEPPTPEKLFQQIWEKKGYHADDEVQKDFMSLVAQAQQQLEDQHQ  416


>A0A3L9M0Y3 Nuclease SbcCD subunit D [Acinetobacter sp. 2JN-4]
Length=416

 Score = 732 bits (1889),  Expect = 0.0
 Identities = 352/415 (85%), Positives = 380/415 (92%), Gaps = 0/415 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFL WLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLTWLLEQIKVKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH +APHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWN+D+TL
Sbjct  61   AQKQLYQFLADAHDIAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNDDRTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            +LERLILP+YDE K +VAWCIALPFLRSAEITGFNEHT  SQSAIAYLH+QLI+EAKRRK
Sbjct  121  DLERLILPIYDEQKQIVAWCIALPFLRSAEITGFNEHTTESQSAIAYLHQQLIAEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            TDDQA+ILMSHAHMQGGETSDSERPIIIGNEEALST LFDD IDYVALGHLHKPQKVQHP
Sbjct  181  TDDQALILMSHAHMQGGETSDSERPIIIGNEEALSTTLFDDVIDYVALGHLHKPQKVQHP  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI  300
            HIRYSGSPIPLSFSEINYKHQVV+V IDP +  +KF+FEAI IPRSI+LHKI+GEL EV+
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVTIDPEKDQNKFEFEAIAIPRSIQLHKIKGELTEVM  300

Query  301  QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD  360
            Q+LKSLA   IE+ID REY+DIEYHT TPP PNLRQQFEDALP  RYRLVRISRQYLS +
Sbjct  301  QRLKSLANEVIENIDHREYVDIEYHTATPPQPNLRQQFEDALPKDRYRLVRISRQYLSNE  360

Query  361  NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
            NNA     I+LEPPTPEKLF+QIW KKGY  DDDV KDF+SLVA+AQ+QLED H+
Sbjct  361  NNAEMKQSISLEPPTPEKLFQQIWQKKGYSVDDDVSKDFLSLVAEAQKQLEDDHR  415


>A0A4Q6XK79 Nuclease SbcCD subunit D [Acinetobacter halotolerans]
Length=416

 Score = 731 bits (1887),  Expect = 0.0
 Identities = 350/415 (84%), Positives = 381/415 (92%), Gaps = 0/415 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFL WLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLTWLLEQIKVKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH +APHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWN+D+TL
Sbjct  61   AQKQLYQFLADAHEIAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNDDRTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            +LERLILP+YDE+K +VAWCIA+PFLRSAEITGFNEHT  SQSAIAYLH+QLI+EAKRRK
Sbjct  121  DLERLILPIYDEHKQIVAWCIAMPFLRSAEITGFNEHTTESQSAIAYLHQQLIAEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            TDDQA+ILMSHAHMQGGETSDSERPIIIGNEEALST LFDD IDYVALGHLHKPQKVQHP
Sbjct  181  TDDQALILMSHAHMQGGETSDSERPIIIGNEEALSTTLFDDVIDYVALGHLHKPQKVQHP  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI  300
            HIRYSGSPIPLSFSEINYKHQVV+V IDP +  +KF+FEAI IPRSI+LHKI+GEL EV+
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVTIDPAKDQNKFEFEAIAIPRSIQLHKIKGELTEVM  300

Query  301  QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD  360
            Q+LKSLA   I++ID REY+DIEYHT TPP PNLRQQFEDALP  RYRLVRISRQYLS +
Sbjct  301  QRLKSLANEVIQNIDHREYVDIEYHTATPPQPNLRQQFEDALPKDRYRLVRISRQYLSNE  360

Query  361  NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQHK  415
            NNA     I+LEPPTPEKLF+QIW KKGY  DDDV KDF+SLVA+AQ+QLED H+
Sbjct  361  NNAEMKKSISLEPPTPEKLFQQIWQKKGYSVDDDVSKDFLSLVAEAQKQLEDDHR  415


>N8R5P7 Nuclease SbcCD subunit D [Acinetobacter sp. CIP-A165]
Length=416

 Score = 731 bits (1886),  Expect = 0.0
 Identities = 352/414 (85%), Positives = 380/414 (92%), Gaps = 0/414 (0%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            M VRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLL+QIK KQPHALLIAGDIFDVINPSSQ
Sbjct  1    MTVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLEQIKVKQPHALLIAGDIFDVINPSSQ  60

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            AQKQLYQFLADAH +APHMQTLMIAGNHDSGYRIEQVEPLLEKYNA+TVGVIRWN+D+TL
Sbjct  61   AQKQLYQFLADAHDIAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVIRWNDDRTL  120

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEAKRRK  180
            +LERLILP+YDE K +VAWCIALPFLRSAEITGFNEHT +SQSAIAYLH+QLI+EAKRRK
Sbjct  121  DLERLILPIYDEQKQIVAWCIALPFLRSAEITGFNEHTAHSQSAIAYLHQQLIAEAKRRK  180

Query  181  TDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQKVQHP  240
            TDDQA+ILMSHAHMQGGETSDSERPIIIGNEEALST LFDD IDYVALGHLHKPQKVQHP
Sbjct  181  TDDQALILMSHAHMQGGETSDSERPIIIGNEEALSTTLFDDVIDYVALGHLHKPQKVQHP  240

Query  241  HIRYSGSPIPLSFSEINYKHQVVDVNIDPTQSTDKFQFEAIEIPRSIKLHKIRGELNEVI  300
            HIRYSGSPIPLSFSEINYKHQVV+V IDP +  +KF+FEAI IPRSI+LHKI+GEL EV+
Sbjct  241  HIRYSGSPIPLSFSEINYKHQVVEVTIDPAKDQNKFEFEAIAIPRSIQLHKIKGELTEVM  300

Query  301  QQLKSLAQGEIESIDLREYIDIEYHTLTPPLPNLRQQFEDALPPKRYRLVRISRQYLSQD  360
            Q+LKSL    IE+ID REY+DIEYHT TPP PNLRQQFEDALP  RYRLVRISRQYLS +
Sbjct  301  QRLKSLENEVIENIDHREYVDIEYHTATPPQPNLRQQFEDALPKDRYRLVRISRQYLSNE  360

Query  361  NNAAQASKINLEPPTPEKLFEQIWDKKGYHADDDVKKDFMSLVAQAQQQLEDQH  414
            NNA     I+LEPPTPEKLF+QIW KKGY  DDDV KDF+SLVA+AQ+QLED H
Sbjct  361  NNAEMKQSISLEPPTPEKLFQQIWQKKGYSVDDDVSKDFLSLVAEAQKQLEDDH  414


>Q8L2H8 Nuclease SbcCD subunit D [Streptococcus thermophilus (strain 
ATCC BAA-250 / LMG 18311)]
Length=232

 Score = 59.7 bits (143),  Expect = 1e-13
 Identities = 55/242 (23%), Positives = 100/242 (41%), Gaps = 26/242 (11%)

Query  1    MAVRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQIKAKQPHALLIAGDIFDVINPSSQ  60
            + ++F HTSDWH+G+     S   E E     ++    +++   ++I+GD++D   P   
Sbjct  5    VVMKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDRAVPPVD  64

Query  61   AQKQLYQFLADAHALAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNARTVGVIRWNEDKTL  120
            A K   + LA    L   +    I+GNHD   R+       +                + 
Sbjct  65   AIKLFNKTLARL-VLEEQIPVYAISGNHDGAERLHFGRDFFQHQGLHL----------ST  113

Query  121  NLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQ-SAIAYLHEQLISEAKRR  179
             LE    P+  EN  +      LPF+   +   + +     +   I      ++ + ++ 
Sbjct  114  RLEEAFEPIELENCQI----FLLPFIDPIDARIYYKDDEGKEIQGIGDALTYILEDMEKA  169

Query  180  KTDDQAIILMSHAHMQGGETSD---------SERPIIIGNEEALSTALFDDAIDYVALGH  230
               D+A +L++H  +   + SD         SE    +G    +++ LF  + DYVALGH
Sbjct  170  FDPDKAHVLVTHFAVSKKDDSDGQGLRELMLSETSNTVGGLTNVTSDLF-KSFDYVALGH  228

Query  231  LH  232
            +H
Sbjct  229  IH  230


>Q9X1X0 Nuclease SbcCD subunit D [Thermotoga maritima (strain 
ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)]
Length=385

 Score = 55.5 bits (132),  Expect = 1e-11
 Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 31/260 (12%)

Query  3    VRFFHTSDWHLGQFFYNHSRHYEHEQFLAWLLKQI----KAKQPHALLIAGDIF-DVINP  57
            ++  HTSDWHLG   +  SR  +  + L   L ++    + ++   +L+ GD+     NP
Sbjct  7    LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNP  66

Query  58   SSQAQKQLYQFLADAHALAPHMQTLMIAGNHD-SGYRIEQVEPLLEKYNARTVGVIRWNE  116
            S  A   L  +L      AP    +++ GNHD  G ++               G    + 
Sbjct  67   SVVALHDLLDYLKRMMRTAP---VVVLPGNHDWKGLKL--------------FGNFVTSI  109

Query  117  DKTLNLERLILPVYDENKNVVAWCIALPFLRSAEITGFNEHTNNSQSAIAYLHEQLISEA  176
               +       PV  E K      I LPF    E     ++  + +  +     +L  EA
Sbjct  110  SSDITFVMSFEPVDVEAKRGQKVRI-LPFPYPDESEALRKNEGDFRFFLESRLNKLYEEA  168

Query  177  KRRKTDDQAIILMSHAHMQGGETSDSERPIIIGNEEALSTALFDDAIDYVALGHLHKPQK  236
             ++   +   I M H  ++G         I  G E  ++ AL    +DY ALGH+H  ++
Sbjct  169  LKK---EDFAIFMGHFTVEG---LAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFRE  222

Query  237  VQ-HPHIRYSGSPIPLSFSE  255
            +Q  P   Y GS I + F E
Sbjct  223  IQKQPLTIYPGSLIRIDFGE  242



Lambda      K        H        a         alpha
   0.320    0.135    0.399    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1680288


  Database: 44f172f1fca1d20ad8d8a542790935a7.TrEMBL.fasta
    Posted date:  May 31, 2024  11:18 PM
  Number of letters in database: 5,203
  Number of sequences in database:  13



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40