BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 334f03641cdf3a6ccea9a3f0f2d5c30e.SwissProt.fasta
12 sequences; 3,387 total letters
Query= ACIAD0933
Length=288
Score E
Sequences producing significant alignments: (Bits) Value
Q6FDN0 UPF0276 protein ACIAD0933 [Acinetobacter baylyi (strain AT... 581 0.0
A8FX91 UPF0276 protein Ssed_2857 [Shewanella sediminis (strain HA... 299 1e-105
Q8EFG5 UPF0276 protein SO_2008 [Shewanella oneidensis (strain MR-1)] 298 2e-105
A3QF58 UPF0276 protein Shew_2240 [Shewanella loihica (strain ATCC... 295 3e-104
Q2Y5Y2 UPF0276 protein Nmul_A2550 [Nitrosospira multiformis (stra... 293 2e-103
A1S556 UPF0276 protein Sama_1305 [Shewanella amazonensis (strain ... 281 1e-98
B0KKK0 UPF0276 protein PputGB1_2003 [Pseudomonas putida (strain G... 277 6e-97
Q02QB5 UPF0276 protein PA14_21580 [Pseudomonas aeruginosa (strain... 273 2e-95
Q9HYW0 UPF0276 protein PA3283 [Pseudomonas aeruginosa (strain ATC... 272 7e-95
Q0VPD2 UPF0276 protein ABO_1518 [Alcanivorax borkumensis (strain ... 272 1e-94
A0A0H3CC29 UPF0276 protein CCNA_03000 [Caulobacter vibrioides (st... 173 2e-56
A0A0H3CEP9 UPF0276 protein CCNA_03364 [Caulobacter vibrioides (st... 162 5e-52
>Q6FDN0 UPF0276 protein ACIAD0933 [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=287
Score = 581 bits (1497), Expect = 0.0
Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%)
Query 1 MTELVGVGLGLRREFMDAFLNAETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHG 60
MTELVGVGLGLRREFMDAFLNAETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHG
Sbjct 1 MTELVGVGLGLRREFMDAFLNAETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHG 60
Query 61 LSLSIGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYV 120
LSLSIGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYV
Sbjct 61 LSLSIGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYV 120
Query 121 AERILRVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVN 180
AERILRVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVN
Sbjct 121 AERILRVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVN 180
Query 181 HDSDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKP 240
HDSDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKP
Sbjct 181 HDSDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKP 240
Query 241 TLLERDFNIPSWAQLQTELSQIKIMQQQGSRNEGKANILSHNATTVL 287
TLLERDFNIPSWAQLQTELSQIKIMQQQGSRNEGKANILSHNATTVL
Sbjct 241 TLLERDFNIPSWAQLQTELSQIKIMQQQGSRNEGKANILSHNATTVL 287
>A8FX91 UPF0276 protein Ssed_2857 [Shewanella sediminis (strain
HAW-EB3)]
Length=278
Score = 299 bits (766), Expect = 1e-105
Identities = 143/263 (54%), Positives = 188/263 (71%), Gaps = 1/263 (0%)
Query 1 MTELVGVGLGLRREFMDAFLNAETHP-DFIEVAPENWMGFGGRHAKLLARCVEKAPLICH 59
M+E VGLGLRRE +D F ++ DF EVAPENWM GG+ + + E+ P CH
Sbjct 1 MSEQAKVGLGLRREMLDEFCDSTPDAIDFFEVAPENWMTLGGKFGRQFKQLTERKPFFCH 60
Query 60 GLSLSIGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNY 119
GLSLSIGGP PLD++F++ +K F+ + + YSEHLSY G++YDL+PIP T+ AV +
Sbjct 61 GLSLSIGGPSPLDIQFVKDIKAFMDLHNISTYSEHLSYCSGTGHMYDLMPIPFTQEAVMH 120
Query 120 VAERILRVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSV 179
V +R+ +V+DIL + L++ENVS Y P AEM E EFV VL +ADC LLLDVNN+YVNSV
Sbjct 121 VVKRVKQVEDILERPLILENVSFYAAPGAEMTEFEFVNAVLSEADCRLLLDVNNIYVNSV 180
Query 180 NHDSDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVK 239
NH DA F+ +MP +RI YLH+AGH + ++L++DTHGA I PVWQLL+ Y++ GV
Sbjct 181 NHHYDASQFLGSMPTERIAYLHIAGHYEEAEDLIVDTHGADIISPVWQLLRECYEIHGVH 240
Query 240 PTLLERDFNIPSWAQLQTELSQI 262
PTLLERDFNIP ++L E+ QI
Sbjct 241 PTLLERDFNIPPTSELLNEIDQI 263
>Q8EFG5 UPF0276 protein SO_2008 [Shewanella oneidensis (strain
MR-1)]
Length=279
Score = 298 bits (764), Expect = 2e-105
Identities = 147/270 (54%), Positives = 189/270 (70%), Gaps = 1/270 (0%)
Query 7 VGLGLRREFMDAFLNA-ETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLSLSI 65
VGLGLRRE + F + DF+EVAPENWM GG++ K + E+ CHGLSLSI
Sbjct 7 VGLGLRREMLSEFCQQLPSAIDFLEVAPENWMTLGGKYGKQFRQLTEQHTFFCHGLSLSI 66
Query 66 GGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYVAERIL 125
G P PLDLEF++++K F+ +Q+ +YSEHLSY G+LYDL+PIP TEAAV +VA R+
Sbjct 67 GSPEPLDLEFVRRIKAFMDLHQIDVYSEHLSYCSGAGHLYDLMPIPFTEAAVKHVARRVK 126
Query 126 RVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHDSDA 185
+V+DIL + L++ENVS Y P+A+M E F+ VL +ADC+LLLDVNN+YVNS+NH DA
Sbjct 127 QVEDILERPLILENVSFYAAPSAQMTELAFLTAVLEEADCKLLLDVNNIYVNSINHQYDA 186
Query 186 YAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTLLER 245
AF+ AMP +RI YLH+AGH + + LLIDTHG+ I PVW LL Y GV PTLLER
Sbjct 187 LAFLKAMPTERIAYLHIAGHFKESEELLIDTHGSDINAPVWALLDSCYAEHGVLPTLLER 246
Query 246 DFNIPSWAQLQTELSQIKIMQQQGSRNEGK 275
DFN+P+ A L E++QI Q + N K
Sbjct 247 DFNLPATAHLLDEINQIHAYQARAKSNLDK 276
>A3QF58 UPF0276 protein Shew_2240 [Shewanella loihica (strain
ATCC BAA-1088 / PV-4)]
Length=278
Score = 295 bits (756), Expect = 3e-104
Identities = 145/257 (56%), Positives = 182/257 (71%), Gaps = 1/257 (0%)
Query 7 VGLGLRREFMDAFLNAETHP-DFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLSLSI 65
VGLGLRRE +D F + DF EVAPENWM GG+ + + EK CHGLSLSI
Sbjct 7 VGLGLRREMLDEFCQSVPGAIDFFEVAPENWMTLGGKFGRQFRQLTEKHKFFCHGLSLSI 66
Query 66 GGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYVAERIL 125
GGP PLD F++Q+K FL + ++IYSEHLSY G+LYDL+PIP T+ AV +VA RI
Sbjct 67 GGPEPLDTRFVKQIKTFLDHHDIEIYSEHLSYCSGKGHLYDLMPIPFTDEAVRHVARRIE 126
Query 126 RVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHDSDA 185
+VQDIL + ++ENVS Y P +EM E EFV VL +ADC LLLDVNN+YVNS+NH DA
Sbjct 127 QVQDILERPFILENVSFYASPASEMSECEFVSAVLEEADCRLLLDVNNIYVNSINHQYDA 186
Query 186 YAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTLLER 245
AF+ AMP +RI YLH+AGH ++L +DTHG+ + DPVW+LL YQ GV PTLLER
Sbjct 187 EAFLRAMPSERIAYLHIAGHYDEAEDLKVDTHGSEVIDPVWRLLAICYQTHGVFPTLLER 246
Query 246 DFNIPSWAQLQTELSQI 262
DFNIP+ +L E+++I
Sbjct 247 DFNIPATHELLKEINKI 263
Score = 16.5 bits (31), Expect = 8.0
Identities = 6/19 (32%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
Query 157 REVLLKADCELLLDVNNVY 175
R+ + A ELL ++N ++
Sbjct 246 RDFNIPATHELLKEINKIH 264
>Q2Y5Y2 UPF0276 protein Nmul_A2550 [Nitrosospira multiformis (strain
ATCC 25196 / NCIMB 11849 / C 71)]
Length=283
Score = 293 bits (751), Expect = 2e-103
Identities = 148/267 (55%), Positives = 189/267 (71%), Gaps = 2/267 (1%)
Query 4 LVGVGLGLRREFMDAFLNAETHP-DFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLS 62
L VGLG RRE + A + DF E+APENW+ GG A+ L E+ P +CHGLS
Sbjct 7 LARVGLGFRRELIPALKSGVPATIDFFEIAPENWIDLGGGAARDLLFFTERYPFVCHGLS 66
Query 63 LSIGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYVAE 122
LSIGGP PLD +Q+++ FL +++V +Y+EHLSY D G+LYDLLPIP TE AV YVAE
Sbjct 67 LSIGGPAPLDEILLQKIRQFLDQHRVLLYTEHLSYCSDDGHLYDLLPIPFTEEAVKYVAE 126
Query 123 RILRVQDILGQRLVIENVSTYLM-PNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNH 181
R+ R QDIL +R+ +EN S Y+ P ++M E +F+R VLL+ADC+L LDVNNVYVNS+NH
Sbjct 127 RVRRTQDILERRIALENASFYVASPISDMSELDFIRAVLLEADCDLHLDVNNVYVNSINH 186
Query 182 DSDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPT 241
D D FI A+P DRI Y+H+AGH + +NL+IDTHGA + DPVW LL +Y + GV PT
Sbjct 187 DYDPVDFIRALPSDRIVYMHMAGHHKEAENLIIDTHGADVIDPVWSLLDQTYGMHGVAPT 246
Query 242 LLERDFNIPSWAQLQTELSQIKIMQQQ 268
LLERDFNIP QL E+ I ++Q Q
Sbjct 247 LLERDFNIPPLEQLMREVLHIALIQAQ 273
>A1S556 UPF0276 protein Sama_1305 [Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B)]
Length=278
Score = 281 bits (719), Expect = 1e-98
Identities = 140/270 (52%), Positives = 183/270 (68%), Gaps = 1/270 (0%)
Query 8 GLGLRREFMDAFLNA-ETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLSLSIG 66
GLGLRRE + F + DF EVAPENWM GG++ K E+ CHGLSLSIG
Sbjct 8 GLGLRREMLAEFSQSVPAQIDFFEVAPENWMALGGKYGKQFRALTERHAFFCHGLSLSIG 67
Query 67 GPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYVAERILR 126
PLD++FI+ +K FL + + +YSEHLSY G+LYDL+P+P T AV ++A R+ +
Sbjct 68 SSAPLDIDFIKGIKAFLDLHGIAVYSEHLSYCSGSGHLYDLMPMPFTPEAVRHIAGRVKQ 127
Query 127 VQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHDSDAY 186
V+DI+ + L++EN+S Y P A+M E EFV VL +ADC+LLLDVNN+YVNS+NH+ DA
Sbjct 128 VEDIIERPLILENISFYAAPGAQMTELEFVLAVLEEADCQLLLDVNNIYVNSINHNYDAA 187
Query 187 AFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTLLERD 246
A++ AMP +RIRYLHVAGH +L++DTHGA I DPVWQLL Y + G PTLLERD
Sbjct 188 AYLAAMPTERIRYLHVAGHYVEAPDLIVDTHGADIVDPVWQLLCDCYALHGPLPTLLERD 247
Query 247 FNIPSWAQLQTELSQIKIMQQQGSRNEGKA 276
FNIP +L E+ +I+ Q R +A
Sbjct 248 FNIPPIGELLQEIDRIRDYQAAAIRTSRRA 277
>B0KKK0 UPF0276 protein PputGB1_2003 [Pseudomonas putida (strain
GB-1)]
Length=277
Score = 277 bits (708), Expect = 6e-97
Identities = 137/273 (50%), Positives = 189/273 (69%), Gaps = 3/273 (1%)
Query 4 LVGVGLGLRREFMDAFLN-AETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLS 62
L+ GLGLRR + L A DF+E APENW+ GG + K LA E+ P+ CHGLS
Sbjct 5 LLNTGLGLRRGLLPELLAMAPGAVDFLECAPENWIAVGGAYGKGLAELAERFPITCHGLS 64
Query 63 LSIGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYVAE 122
LS+GG PLD +F+ Q++ FL R+QV++YSEHLSY D G+LYDL+PIP T+ AV++VA
Sbjct 65 LSLGGSAPLDWQFLDQIRQFLDRHQVRLYSEHLSYCSDDGHLYDLMPIPFTDEAVHHVAA 124
Query 123 RILRVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHD 182
RI R Q L +R+ +EN+S Y P A M E EF+R VL +ADC+LLLDVNNV+VN+ NH
Sbjct 125 RIRRAQTHLERRIAVENISYYAAPYAAMSELEFIRAVLDEADCDLLLDVNNVFVNACNHG 184
Query 183 SDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTL 242
DA F++ +P+ R+ +H+AGH +L +DTHGA +++ VW L ++ + GV+PT+
Sbjct 185 YDAREFLEGLPRARVTCMHIAGHYDEAPDLKVDTHGAPVKEDVWALYAFACERFGVQPTV 244
Query 243 LERDFNIPSWAQLQTELSQIKIMQQQ--GSRNE 273
LERDFN+P AQL E ++I+ MQ+ G R+E
Sbjct 245 LERDFNLPPLAQLLEETARIRDMQRSWGGQRHE 277
>Q02QB5 UPF0276 protein PA14_21580 [Pseudomonas aeruginosa (strain
UCBPP-PA14)]
Length=284
Score = 273 bits (699), Expect = 2e-95
Identities = 135/276 (49%), Positives = 188/276 (68%), Gaps = 5/276 (2%)
Query 6 GVGLGLRREFMDAF-LNAETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLSLS 64
G GLGLRR ++ E DF+EVAPENW+G GGR + E+ P +CHGLSL+
Sbjct 8 GAGLGLRRALLEPLGAGDEVRVDFLEVAPENWIGIGGRLGRQFRELTERLPFLCHGLSLN 67
Query 65 IGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYVAERI 124
+GG PLD+ ++ +K F++++ ++ YSEHLS D G LYDL+P+P ++ +V VAER+
Sbjct 68 LGGYAPLDMSLLRAIKGFIEQHGIRAYSEHLSACADDGQLYDLMPLPFSDESVRRVAERV 127
Query 125 LRVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHDSD 184
VQD+L + L++ENVS Y E+ E +FVR VL +ADC+LLLDVNNVYVN+ N D
Sbjct 128 RVVQDVLERPLIVENVSAYARLPGELEEVDFVRAVLEEADCQLLLDVNNVYVNACNFGFD 187
Query 185 AYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTLLE 244
A+A+I AMP RI YLH+AGH++ +L IDTHGA + DPVW+LL ++Y G +PTLLE
Sbjct 188 AHAYIAAMPSRRIAYLHMAGHDEQGASLKIDTHGAPVCDPVWELLAHAYACHGERPTLLE 247
Query 245 RDFNIPSWAQLQTELSQIKIMQQQGSRNEGKANILS 280
RDFN+P ++L E +I+ +Q R G+A + S
Sbjct 248 RDFNLPPLSELYAETDRIRELQ----RRSGEAQLRS 279
>Q9HYW0 UPF0276 protein PA3283 [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=284
Score = 272 bits (695), Expect = 7e-95
Identities = 134/276 (49%), Positives = 188/276 (68%), Gaps = 5/276 (2%)
Query 6 GVGLGLRREFMDAFLNAE-THPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLSLS 64
G GLGLRR ++ + DF+EVAPENW+G GGR + E+ P +CHGLSL+
Sbjct 8 GAGLGLRRALLEPLGAGDGVRVDFLEVAPENWIGIGGRLGRQFRELTERLPFLCHGLSLN 67
Query 65 IGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEAAVNYVAERI 124
+GG PLD+ ++ +K F++++ ++ YSEHLS D G LYDL+P+P ++ +V VAER+
Sbjct 68 LGGYAPLDMSLLRAIKGFIEQHDIRAYSEHLSACADDGQLYDLMPLPFSDESVRRVAERV 127
Query 125 LRVQDILGQRLVIENVSTYLMPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHDSD 184
VQD+L + L++ENVS Y E+ E +FVR VL +ADC+LLLDVNNVYVN+ N D
Sbjct 128 RVVQDVLERPLIVENVSAYARLPGELEEVDFVRAVLEEADCQLLLDVNNVYVNACNFGFD 187
Query 185 AYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTLLE 244
A+A+I AMP RI YLH+AGH++ +L IDTHGA + DPVW+LL ++Y G +PTLLE
Sbjct 188 AHAYIAAMPSRRIAYLHMAGHDEQGASLKIDTHGAPVCDPVWELLAHAYACHGERPTLLE 247
Query 245 RDFNIPSWAQLQTELSQIKIMQQQGSRNEGKANILS 280
RDFN+P ++L E +I+ +Q R G+A + S
Sbjct 248 RDFNLPPLSELYAETDRIRELQ----RRSGEAQLRS 279
>Q0VPD2 UPF0276 protein ABO_1518 [Alcanivorax borkumensis (strain
ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)]
Length=299
Score = 272 bits (695), Expect = 1e-94
Identities = 143/277 (52%), Positives = 181/277 (65%), Gaps = 11/277 (4%)
Query 2 TELVGVGLGLRREFMDAFLNAETHP------DFIEVAPENWMGFGGRHAKLLARCVEKAP 55
T + GVGLGLRR M A + DF+EVAPENW+ GGR K E+ P
Sbjct 5 TPVSGVGLGLRRALMGPLSQARDYAPESIPFDFMEVAPENWIPMGGRQGKEFRAFTERYP 64
Query 56 LICHGLSLSIGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGYLYDLLPIPMTEA 115
+ HGLSLS+GGP PLD E ++ VK FL+++ ++ Y+EHLSY D G+LYDL+PIP T+
Sbjct 65 FVAHGLSLSLGGPEPLDFELLKSVKSFLKQHNIRRYTEHLSYCSDHGHLYDLMPIPFTQE 124
Query 116 AVNYVAERILRVQDILGQRLVIENVSTYLM-----PNAEMPEAEFVREVLLKADCELLLD 170
AV YVA+RI +VQD L Q + IE+VS Y A+M E +FV VL +A+CELLLD
Sbjct 125 AVYYVADRIRQVQDFLEQPIGIEHVSYYAQLGNAALGAQMSEIDFVNAVLKEANCELLLD 184
Query 171 VNNVYVNSVNHDSDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQ 230
VNN YVN +NH D FI A+P +RI YLH+AGH ++L +DTHG+ + DPVW LL
Sbjct 185 VNNAYVNGINHGYDPLDFISALPGERICYLHIAGHFDEAEDLKVDTHGSDVIDPVWALLD 244
Query 231 YSYQVCGVKPTLLERDFNIPSWAQLQTELSQIKIMQQ 267
++YQ G PTLLERDFNIP A L EL +I QQ
Sbjct 245 HAYQTFGSLPTLLERDFNIPDNATLFAELRKIGGYQQ 281
>A0A0H3CC29 UPF0276 protein CCNA_03000 [Caulobacter vibrioides
(strain NA1000 / CB15N)]
Length=280
Score = 173 bits (439), Expect = 2e-56
Identities = 101/269 (38%), Positives = 153/269 (57%), Gaps = 4/269 (1%)
Query 6 GVGLGLRREFMDAFLNAETH-PDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLSLS 64
G GLGLR AFL++E DF+EV EN+M GGR ++ E+ P+ HG+S+S
Sbjct 8 GFGLGLRPPHYRAFLDSERPLVDFVEVISENFMVGGGRPLHVIDAVRERYPVALHGVSMS 67
Query 65 IGGPHPLDLEFIQQVKLFLQRYQVQIYSEHLSYTHDGGY-LYDLLPIPMTEAAVNYVAER 123
+G + L++++++K R S+HL +T G+ +DLLP+P TE A+ V
Sbjct 68 VGSADGVKLDYLRRLKGLADRVDPMWVSDHLCWTGVEGFNSHDLLPVPYTEEAMAVVCAN 127
Query 124 ILRVQDILGQRLVIENVSTYL-MPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHD 182
I QD+L + L++EN S+Y+ N M E +F+ E+ + C LLLD+NN+YV++ NH
Sbjct 128 IALAQDVLERPLLLENPSSYVTFANDAMAEHQFLAEMCARTGCYLLLDINNIYVSASNHG 187
Query 183 SDAYAFIDAMPKDRIRYLHVAGHEQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTL 242
D Y ++ A+P DR+ +H+AGH Q + LLIDTH + D VW L + + G +
Sbjct 188 FDPYEYLAAVPVDRVLQIHLAGHSQ-GRELLIDTHDQPVPDSVWALYEAAAGRFGPVAAM 246
Query 243 LERDFNIPSWAQLQTELSQIKIMQQQGSR 271
+ERD +IP L EL + G R
Sbjct 247 IERDDDIPPLDDLLAELDVARARWAAGRR 275
>A0A0H3CEP9 UPF0276 protein CCNA_03364 [Caulobacter vibrioides
(strain NA1000 / CB15N)]
Length=280
Score = 162 bits (410), Expect = 5e-52
Identities = 95/275 (35%), Positives = 148/275 (54%), Gaps = 4/275 (1%)
Query 8 GLGLRREFMDAFLNAETHPDFIEVAPENWMGFGGRHAKLLARCVEKAPLICHGLSLSIGG 67
GLGL+ + + + + EV PEN+M GG L + P+ HG+ LS+
Sbjct 6 GLGLKSQHYGDAIACDAEGLWFEVHPENYMSAGGPRLAALEAVRARRPVSLHGVGLSLAA 65
Query 68 PHPLDLEFIQQVKLFLQRYQVQIYSEHLSY-THDGGYLYDLLPIPMTEAAVNYVAERILR 126
D E +Q +K + R+ + SEHL++ TH G + DLLP P T AA++ + + R
Sbjct 66 DTDPDPEHLQALKRLVDRFDPFVVSEHLAWSTHRGAHHPDLLPFPRTRAALDRICGNVAR 125
Query 127 VQDILGQRLVIENVSTYL-MPNAEMPEAEFVREVLLKADCELLLDVNNVYVNSVNHDSDA 185
+QD L +R++IEN S YL + + E +F+ + + C LL+DVNNV+V++ N
Sbjct 126 MQDALQRRVLIENPSLYLPLKGHALDEVDFLEALATRTGCGLLVDVNNVFVSAQNLGYAP 185
Query 186 YAFIDAMPKDRIRYLHVAGH--EQVEKNLLIDTHGAAIRDPVWQLLQYSYQVCGVKPTLL 243
++DA+P I +H+AGH + NLLIDTHGA + + VW L G +PTL+
Sbjct 186 ETYLDALPAHAIGEIHLAGHAPDPGGSNLLIDTHGAPVAEVVWTLYARLIARIGPRPTLI 245
Query 244 ERDFNIPSWAQLQTELSQIKIMQQQGSRNEGKANI 278
ERD +IP +A L E ++ + G A++
Sbjct 246 ERDDDIPDFAALMAERNRAVAVLASGQTAREPAHV 280
Lambda K H a alpha
0.324 0.139 0.419 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 703395
Database: 334f03641cdf3a6ccea9a3f0f2d5c30e.SwissProt.fasta
Posted date: May 9, 2024 5:45 PM
Number of letters in database: 3,387
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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