BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d40faf4972142813214152f25e5ea718.TrEMBL.fasta
12 sequences; 3,704 total letters
Query= ACIAD0956
Length=90
Score E
Sequences producing significant alignments: (Bits) Value
Q6FDK9 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 169 4e-60
A0A7S8XLN0 TIGR04086 family membrane protein [Acinetobacter sp. T... 118 2e-37
A0A1C4GWS5 CAP-Gly protein [Acinetobacter albensis] 117 6e-37
A0A031LUI6 CAP-Gly protein [Acinetobacter sp. Ver3] 103 6e-32
A0A1H7NNY1 Uncharacterized protein [Acinetobacter sp. DSM 11652] 93.6 1e-28
A0A4R1XEZ7 CAP-Gly protein [Acinetobacter calcoaceticus] 81.3 2e-23
A0A217EDD5 CAP-Gly protein [Acinetobacter apis] 79.0 1e-22
A0A1P8EKS9 CAP-Gly protein [Acinetobacter soli] 77.0 7e-22
A0A0M1I7Y9 CAP-Gly protein [Acinetobacter sp. C15] 77.0 7e-22
N9C0G3 CAP-Gly protein [Acinetobacter soli NIPH 2899] 77.0 7e-22
A0A3R8ZXC3 CAP-Gly protein [Acinetobacter soli] 75.5 3e-21
A0A1G6GLK0 CAP-Gly protein [Acinetobacter boissieri] 72.8 3e-20
>Q6FDK9 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=89
Score = 169 bits (427), Expect = 4e-60
Identities = 88/89 (99%), Positives = 89/89 (100%), Gaps = 0/89 (0%)
Query 1 LLSTILSRINNYLTEQEQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSF 60
+LSTILSRINNYLTEQEQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSF
Sbjct 1 MLSTILSRINNYLTEQEQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSF 60
Query 61 IGLLIGLIVTMFTGKVGVDRILRTRTVVR 89
IGLLIGLIVTMFTGKVGVDRILRTRTVVR
Sbjct 61 IGLLIGLIVTMFTGKVGVDRILRTRTVVR 89
>A0A7S8XLN0 TIGR04086 family membrane protein [Acinetobacter sp.
TTH0-4]
Length=333
Score = 118 bits (296), Expect = 2e-37
Identities = 56/81 (69%), Positives = 69/81 (85%), Gaps = 0/81 (0%)
Query 9 INNYLTEQEQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLI 68
+NNY +Q++FFN+LE N+QKAK++Y QMKEEAKAKAAAA+ AAAKAALWSFIGL IGL+
Sbjct 253 VNNYFIQQQEFFNSLETNVQKAKIQYIQMKEEAKAKAAAASNAAAKAALWSFIGLFIGLM 312
Query 69 VTMFTGKVGVDRILRTRTVVR 89
VTMF GK GV I R RT+++
Sbjct 313 VTMFAGKFGVTHISRHRTLIK 333
Score = 16.5 bits (31), Expect = 2.1
Identities = 4/11 (36%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 57 LWSFIGLLIGL 67
+W+ + LL+ L
Sbjct 61 IWTLLSLLVSL 71
>A0A1C4GWS5 CAP-Gly protein [Acinetobacter albensis]
Length=333
Score = 117 bits (292), Expect = 6e-37
Identities = 55/81 (68%), Positives = 69/81 (85%), Gaps = 0/81 (0%)
Query 9 INNYLTEQEQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLI 68
+NNY +Q++FFN+LE N+QKAK++Y QMKEEAKAKAAAA+ AAAKAALWSFIGL IGL+
Sbjct 253 VNNYFIQQQEFFNSLETNVQKAKIQYIQMKEEAKAKAAAASNAAAKAALWSFIGLFIGLM 312
Query 69 VTMFTGKVGVDRILRTRTVVR 89
VT+F GK GV I R RT+++
Sbjct 313 VTVFAGKFGVTHISRHRTLIK 333
Score = 16.5 bits (31), Expect = 2.1
Identities = 4/11 (36%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 57 LWSFIGLLIGL 67
+W+ + LL+ L
Sbjct 61 IWTLLSLLVSL 71
Score = 16.2 bits (30), Expect = 2.8
Identities = 6/19 (32%), Positives = 11/19 (58%), Gaps = 0/19 (0%)
Query 60 FIGLLIGLIVTMFTGKVGV 78
F G++ L ++M +GV
Sbjct 18 FAGVIAVLAISMLLSLLGV 36
>A0A031LUI6 CAP-Gly protein [Acinetobacter sp. Ver3]
Length=333
Score = 103 bits (258), Expect = 6e-32
Identities = 48/71 (68%), Positives = 64/71 (90%), Gaps = 0/71 (0%)
Query 9 INNYLTEQEQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLI 68
+NN+L +Q++FFN+LE NIQ AK+KYA++K++A+ KAA AT+AAAKAALWSFIGLLIGLI
Sbjct 253 VNNFLIQQDKFFNDLEANIQSAKLKYAELKDQAREKAANATKAAAKAALWSFIGLLIGLI 312
Query 69 VTMFTGKVGVD 79
VT+F G+ GV+
Sbjct 313 VTIFAGRFGVN 323
Score = 18.5 bits (36), Expect = 0.45
Identities = 6/17 (35%), Positives = 11/17 (65%), Gaps = 0/17 (0%)
Query 56 ALWSFIGLLIGLIVTMF 72
++W+ I LL+ L + F
Sbjct 60 SVWTIISLLVSLAIGGF 76
Score = 16.2 bits (30), Expect = 2.8
Identities = 5/19 (26%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
Query 60 FIGLLIGLIVTMFTGKVGV 78
F G+++ L +++ +GV
Sbjct 18 FAGVIVVLAISILLSLLGV 36
Score = 16.2 bits (30), Expect = 2.8
Identities = 11/37 (30%), Positives = 18/37 (49%), Gaps = 3/37 (8%)
Query 21 NNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAAL 57
+N + IQK Q+K A++ A+ + AAL
Sbjct 205 DNSDAIIQKLS---EQLKTRAQSVTASINKNEVSAAL 238
>A0A1H7NNY1 Uncharacterized protein [Acinetobacter sp. DSM 11652]
Length=252
Score = 93.6 bits (231), Expect = 1e-28
Identities = 45/71 (63%), Positives = 61/71 (86%), Gaps = 1/71 (1%)
Query 9 INNYLTEQEQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLI 68
+NN+L + ++FFN+ E NIQ AK+KYA++K++A+ KAA AT+ AAKAALWSFIGLLIGLI
Sbjct 173 VNNFLIQLDKFFNDFEANIQSAKLKYAELKDQAREKAANATK-AAKAALWSFIGLLIGLI 231
Query 69 VTMFTGKVGVD 79
VT+F G+ GV+
Sbjct 232 VTIFAGRFGVN 242
Score = 16.2 bits (30), Expect = 2.7
Identities = 11/37 (30%), Positives = 18/37 (49%), Gaps = 3/37 (8%)
Query 21 NNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAAL 57
+N + IQK Q+K A++ A+ + AAL
Sbjct 125 DNSDAIIQKLS---EQLKTRAQSVTASINKNEVSAAL 158
>A0A4R1XEZ7 CAP-Gly protein [Acinetobacter calcoaceticus]
Length=348
Score = 81.3 bits (199), Expect = 2e-23
Identities = 41/87 (47%), Positives = 60/87 (69%), Gaps = 7/87 (8%)
Query 9 INNYLTEQE-------QFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFI 61
++N++ E++ Q N LE+NI+KA++KY Q+KE+A AA AT+AAAKAALWSFI
Sbjct 261 VDNFILERQRAAEKINQELNQLEVNIKKAELKYQQLKEQAAETAAQATKAAAKAALWSFI 320
Query 62 GLLIGLIVTMFTGKVGVDRILRTRTVV 88
GL+IG + + F G+ V R T+ V+
Sbjct 321 GLVIGALASAFAGRWAVSRYALTKKVI 347
>A0A217EDD5 CAP-Gly protein [Acinetobacter apis]
Length=333
Score = 79.0 bits (193), Expect = 1e-22
Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 7/79 (9%)
Query 9 INNYLTEQE-------QFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFI 61
+ N+L E+E + F E +I AKVKY ++K++A+ KAA AT+AAAKAALW+FI
Sbjct 253 VENFLKEREVATQKVNEAFTQAEASINDAKVKYQELKQQAREKAAVATKAAAKAALWAFI 312
Query 62 GLLIGLIVTMFTGKVGVDR 80
GL +G +V++F G+VGV++
Sbjct 313 GLFLGALVSIFAGRVGVNK 331
Score = 17.3 bits (33), Expect = 1.1
Identities = 8/21 (38%), Positives = 14/21 (67%), Gaps = 1/21 (5%)
Query 57 LWSFIGLLIGL-IVTMFTGKV 76
+W+ I LL+ L I + +GK+
Sbjct 61 IWTGISLLVSLGIGSFISGKL 81
Score = 16.2 bits (30), Expect = 2.8
Identities = 8/19 (42%), Positives = 10/19 (53%), Gaps = 0/19 (0%)
Query 60 FIGLLIGLIVTMFTGKVGV 78
F G LI L V+ +GV
Sbjct 18 FAGTLIVLAVSFLLSILGV 36
>A0A1P8EKS9 CAP-Gly protein [Acinetobacter soli]
Length=337
Score = 77.0 bits (188), Expect = 7e-22
Identities = 34/61 (56%), Positives = 48/61 (79%), Gaps = 0/61 (0%)
Query 17 EQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLIVTMFTGKV 76
+ FFN+L +NI ++ KY Q+KE+ + +AAAA +AAAK ALWSFIGL IG++VT+F G+
Sbjct 271 QTFFNDLTVNINNSEKKYEQLKEQVREQAAAAAKAAAKTALWSFIGLFIGMLVTIFAGRF 330
Query 77 G 77
G
Sbjct 331 G 331
Score = 18.9 bits (37), Expect = 0.33
Identities = 8/17 (47%), Positives = 14/17 (82%), Gaps = 1/17 (6%)
Query 57 LWSFIGLLIGLIVTMFT 73
+W+ + LLIGLI+++ T
Sbjct 94 VWA-LSLLIGLILSIMT 109
Score = 17.3 bits (33), Expect = 1.1
Identities = 5/11 (45%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 57 LWSFIGLLIGL 67
+W+ I LL+ L
Sbjct 62 IWTLISLLVSL 72
>A0A0M1I7Y9 CAP-Gly protein [Acinetobacter sp. C15]
Length=337
Score = 77.0 bits (188), Expect = 7e-22
Identities = 34/61 (56%), Positives = 48/61 (79%), Gaps = 0/61 (0%)
Query 17 EQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLIVTMFTGKV 76
+ FFN+L +NI ++ KY Q+KE+ + +AAAA +AAAK ALWSFIGL IG++VT+F G+
Sbjct 271 QTFFNDLTVNINNSEKKYEQLKEQVREQAAAAAKAAAKTALWSFIGLFIGMLVTIFAGRF 330
Query 77 G 77
G
Sbjct 331 G 331
Score = 18.9 bits (37), Expect = 0.33
Identities = 8/17 (47%), Positives = 14/17 (82%), Gaps = 1/17 (6%)
Query 57 LWSFIGLLIGLIVTMFT 73
+W+ + LLIGLI+++ T
Sbjct 94 VWA-LSLLIGLILSIMT 109
Score = 17.3 bits (33), Expect = 1.1
Identities = 5/11 (45%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 57 LWSFIGLLIGL 67
+W+ I LL+ L
Sbjct 62 IWTLISLLVSL 72
>N9C0G3 CAP-Gly protein [Acinetobacter soli NIPH 2899]
Length=337
Score = 77.0 bits (188), Expect = 7e-22
Identities = 34/61 (56%), Positives = 48/61 (79%), Gaps = 0/61 (0%)
Query 17 EQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLIVTMFTGKV 76
+ FFN+L +NI ++ KY Q+KE+ + +AAAA +AAAK ALWSFIGL IG++VT+F G+
Sbjct 271 QTFFNDLTVNINNSEKKYEQLKEQVREQAAAAAKAAAKTALWSFIGLFIGMLVTIFAGRF 330
Query 77 G 77
G
Sbjct 331 G 331
Score = 18.9 bits (37), Expect = 0.33
Identities = 8/17 (47%), Positives = 14/17 (82%), Gaps = 1/17 (6%)
Query 57 LWSFIGLLIGLIVTMFT 73
+W+ + LLIGLI+++ T
Sbjct 94 VWA-LSLLIGLILSIMT 109
Score = 17.3 bits (33), Expect = 1.1
Identities = 5/11 (45%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 57 LWSFIGLLIGL 67
+W+ I LL+ L
Sbjct 62 IWTLISLLVSL 72
>A0A3R8ZXC3 CAP-Gly protein [Acinetobacter soli]
Length=337
Score = 75.5 bits (184), Expect = 3e-21
Identities = 33/61 (54%), Positives = 47/61 (77%), Gaps = 0/61 (0%)
Query 17 EQFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFIGLLIGLIVTMFTGKV 76
+ FFN+L +NI ++ KY Q+KE+ + +AA A +AAAK ALWSFIGL IG++VT+F G+
Sbjct 271 QTFFNDLTVNINNSEKKYEQLKEQVREQAATAAKAAAKTALWSFIGLFIGMLVTIFAGRF 330
Query 77 G 77
G
Sbjct 331 G 331
Score = 18.9 bits (37), Expect = 0.33
Identities = 8/17 (47%), Positives = 14/17 (82%), Gaps = 1/17 (6%)
Query 57 LWSFIGLLIGLIVTMFT 73
+W+ + LLIGLI+++ T
Sbjct 94 VWA-LSLLIGLILSIMT 109
Score = 17.3 bits (33), Expect = 1.1
Identities = 5/11 (45%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 57 LWSFIGLLIGL 67
+W+ I LL+ L
Sbjct 62 IWTLISLLVSL 72
>A0A1G6GLK0 CAP-Gly protein [Acinetobacter boissieri]
Length=335
Score = 72.8 bits (177), Expect = 3e-20
Identities = 36/79 (46%), Positives = 51/79 (65%), Gaps = 7/79 (9%)
Query 9 INNYLTEQE-------QFFNNLEINIQKAKVKYAQMKEEAKAKAAAATQAAAKAALWSFI 61
+ N+L E+E Q F + +I AKVKY +K++AK KAA ATQ AAK ALW+FI
Sbjct 254 VENFLKERELAVQKLNQAFEKAQTSINDAKVKYQALKQDAKEKAAIATQVAAKTALWAFI 313
Query 62 GLLIGLIVTMFTGKVGVDR 80
GL +G +V++F G+ G +
Sbjct 314 GLFLGALVSIFAGRFGAKK 332
Lambda K H a alpha
0.329 0.137 0.372 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 188556
Database: d40faf4972142813214152f25e5ea718.TrEMBL.fasta
Posted date: May 9, 2024 5:49 AM
Number of letters in database: 3,704
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
