BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f1e19bb32307a749409b81a368b9ca72.SwissProt.fasta
18 sequences; 4,908 total letters
Query= ACIAD0957
Length=286
Score E
Sequences producing significant alignments: (Bits) Value
P0CF82 Transposase InsF for insertion sequence IS3D [Escherichia ... 237 6e-81
P0CF81 Transposase InsF for insertion sequence IS3C [Escherichia ... 237 6e-81
P0CF80 Transposase InsF for insertion sequence IS3B [Escherichia ... 237 6e-81
P0CF85 Transposase InsF for insertion sequence IS3 [Escherichia c... 237 6e-81
P0CF79 Transposase InsF for insertion sequence IS3A [Escherichia ... 237 6e-81
Q9JMT3 Transposase InsF for insertion sequence IS3fB [Escherichia... 230 3e-78
P16940 Insertion element IS600 uncharacterized 31 kDa protein [Sh... 205 1e-68
P35878 Transposase for insertion sequence element IS904 [Lactococ... 187 6e-62
P19769 Putative transposase InsK for insertion sequence element I... 119 2e-35
P16942 Transposase for insertion sequence element IS629 [Shigella... 115 9e-34
O05086 Uncharacterized transposase-like protein HI_1721 [Haemophi... 109 3e-32
Q47718 Putative transposase InsO for insertion sequence element I... 99.4 1e-28
P9WKH8 Putative transposase for insertion sequence element IS986/... 92.8 2e-25
P59800 Putative transposase for insertion sequence element IS986/... 92.4 2e-25
P9WKH9 Putative transposase for insertion sequence element IS986/... 92.4 2e-25
A5TY79 Putative transposase for insertion sequence element IS986/... 92.4 2e-25
P11257 Transposase for insertion sequence element IS3411 [Escheri... 73.9 7e-19
Q06715 ATP-dependent protease [Lactococcus lactis subsp. lactis] 72.4 5e-18
>P0CF82 Transposase InsF for insertion sequence IS3D [Escherichia
coli (strain K12)]
Length=288
Score = 237 bits (604), Expect = 6e-81
Identities = 117/274 (43%), Positives = 171/274 (62%), Gaps = 7/274 (3%)
Query 5 EVTVSSACKCLGVSTSGYYAWRKRQTNLAQKY-------NDLKAVYWQHHARLGAPSLVH 57
E ++ + C+ L V+ SG+Y W +R+T ++ + + + A + + R GAP L
Sbjct 12 EFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTD 71
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
++ GY + +TV L++ GLR+K +RK+ + H LP + NLL++ F + PN+
Sbjct 72 ELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQK 131
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVM 177
W DITY+RT +GWLYL V++DL+SR ++GW S R+ QL CDA A+ R+ P V+
Sbjct 132 WAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVI 191
Query 178 VHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRK 237
VH+D+G QYCS D++A L +N SMS +G C+DNA ESFFH+LK +HG F +R+
Sbjct 192 VHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISRE 251
Query 238 EANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQK 271
A +F+YIE YNR RRHS G LSPE FE K
Sbjct 252 IMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK 285
>P0CF81 Transposase InsF for insertion sequence IS3C [Escherichia
coli (strain K12)]
Length=288
Score = 237 bits (604), Expect = 6e-81
Identities = 117/274 (43%), Positives = 171/274 (62%), Gaps = 7/274 (3%)
Query 5 EVTVSSACKCLGVSTSGYYAWRKRQTNLAQKY-------NDLKAVYWQHHARLGAPSLVH 57
E ++ + C+ L V+ SG+Y W +R+T ++ + + + A + + R GAP L
Sbjct 12 EFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTD 71
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
++ GY + +TV L++ GLR+K +RK+ + H LP + NLL++ F + PN+
Sbjct 72 ELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQK 131
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVM 177
W DITY+RT +GWLYL V++DL+SR ++GW S R+ QL CDA A+ R+ P V+
Sbjct 132 WAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVI 191
Query 178 VHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRK 237
VH+D+G QYCS D++A L +N SMS +G C+DNA ESFFH+LK +HG F +R+
Sbjct 192 VHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISRE 251
Query 238 EANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQK 271
A +F+YIE YNR RRHS G LSPE FE K
Sbjct 252 IMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK 285
>P0CF80 Transposase InsF for insertion sequence IS3B [Escherichia
coli (strain K12)]
Length=288
Score = 237 bits (604), Expect = 6e-81
Identities = 117/274 (43%), Positives = 171/274 (62%), Gaps = 7/274 (3%)
Query 5 EVTVSSACKCLGVSTSGYYAWRKRQTNLAQKY-------NDLKAVYWQHHARLGAPSLVH 57
E ++ + C+ L V+ SG+Y W +R+T ++ + + + A + + R GAP L
Sbjct 12 EFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTD 71
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
++ GY + +TV L++ GLR+K +RK+ + H LP + NLL++ F + PN+
Sbjct 72 ELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQK 131
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVM 177
W DITY+RT +GWLYL V++DL+SR ++GW S R+ QL CDA A+ R+ P V+
Sbjct 132 WAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVI 191
Query 178 VHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRK 237
VH+D+G QYCS D++A L +N SMS +G C+DNA ESFFH+LK +HG F +R+
Sbjct 192 VHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISRE 251
Query 238 EANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQK 271
A +F+YIE YNR RRHS G LSPE FE K
Sbjct 252 IMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK 285
>P0CF85 Transposase InsF for insertion sequence IS3 [Escherichia
coli O111:H-]
Length=288
Score = 237 bits (604), Expect = 6e-81
Identities = 117/274 (43%), Positives = 171/274 (62%), Gaps = 7/274 (3%)
Query 5 EVTVSSACKCLGVSTSGYYAWRKRQTNLAQKY-------NDLKAVYWQHHARLGAPSLVH 57
E ++ + C+ L V+ SG+Y W +R+T ++ + + + A + + R GAP L
Sbjct 12 EFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTD 71
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
++ GY + +TV L++ GLR+K +RK+ + H LP + NLL++ F + PN+
Sbjct 72 ELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQK 131
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVM 177
W DITY+RT +GWLYL V++DL+SR ++GW S R+ QL CDA A+ R+ P V+
Sbjct 132 WAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVI 191
Query 178 VHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRK 237
VH+D+G QYCS D++A L +N SMS +G C+DNA ESFFH+LK +HG F +R+
Sbjct 192 VHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISRE 251
Query 238 EANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQK 271
A +F+YIE YNR RRHS G LSPE FE K
Sbjct 252 IMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK 285
>P0CF79 Transposase InsF for insertion sequence IS3A [Escherichia
coli (strain K12)]
Length=288
Score = 237 bits (604), Expect = 6e-81
Identities = 117/274 (43%), Positives = 171/274 (62%), Gaps = 7/274 (3%)
Query 5 EVTVSSACKCLGVSTSGYYAWRKRQTNLAQKY-------NDLKAVYWQHHARLGAPSLVH 57
E ++ + C+ L V+ SG+Y W +R+T ++ + + + A + + R GAP L
Sbjct 12 EFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTD 71
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
++ GY + +TV L++ GLR+K +RK+ + H LP + NLL++ F + PN+
Sbjct 72 ELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQK 131
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVM 177
W DITY+RT +GWLYL V++DL+SR ++GW S R+ QL CDA A+ R+ P V+
Sbjct 132 WAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVI 191
Query 178 VHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRK 237
VH+D+G QYCS D++A L +N SMS +G C+DNA ESFFH+LK +HG F +R+
Sbjct 192 VHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISRE 251
Query 238 EANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQK 271
A +F+YIE YNR RRHS G LSPE FE K
Sbjct 252 IMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK 285
>Q9JMT3 Transposase InsF for insertion sequence IS3fB [Escherichia
coli (strain K12)]
Length=288
Score = 230 bits (586), Expect = 3e-78
Identities = 115/274 (42%), Positives = 169/274 (62%), Gaps = 7/274 (3%)
Query 5 EVTVSSACKCLGVSTSGYYAWRKRQTNLAQKY-------NDLKAVYWQHHARLGAPSLVH 57
E ++ + C+ L V+ SG+Y W +R+T ++ + + + A + + R AP L
Sbjct 12 EFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYCAPRLTD 71
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
++ GY + +TV L+ GLR+K +RK+ + H LP + NLL++ F + PN+
Sbjct 72 ELRAQGYPFNVKTVAASLRCQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQK 131
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVM 177
W DITY+RT +GWLYL V++DL+SR ++GW S R+ QL CDA A+ R+ P V+
Sbjct 132 WAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPWNVI 191
Query 178 VHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRK 237
VH+D+G QYCS D++A L +N SMS +G C+DNA ESFFH+LK +HG F +R+
Sbjct 192 VHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISRE 251
Query 238 EANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQK 271
A +F+YIE YNR RRHS G LSPE FE +
Sbjct 252 IMRATVFNYIECDYNRWRRHSWCGGLSPEQFENQ 285
>P16940 Insertion element IS600 uncharacterized 31 kDa protein
[Shigella sonnei]
Length=272
Score = 205 bits (521), Expect = 1e-68
Identities = 105/266 (39%), Positives = 160/266 (60%), Gaps = 5/266 (2%)
Query 12 CKCLGVSTSGYYAWRKRQTNLAQKYND-----LKAVYWQHHARLGAPSLVHDMHDLGYSM 66
C+ GVS SGYY W + + + ++ ++ +K + + G L ++ + G +
Sbjct 2 CQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGTRRLQTELAENGIIV 61
Query 67 SERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKIWTTDITYIR 126
+ R+ K+L LR K RK++ TT+SNH LP APNLL++ F PN++W D+TY+
Sbjct 62 GRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVA 121
Query 127 TKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVMVHSDQGSQY 186
T++GWLYL + D+++ IV + R+ ++L A A+ Q P G++ HSD+GSQY
Sbjct 122 TQEGWLYLAGIKDVYTCEIVRYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQY 181
Query 187 CSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRKEANAVLFDY 246
C+ D+R + + SMSR+GNC+DNA ESF+ TLK + F R EA +V+ +Y
Sbjct 182 CAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREY 241
Query 247 IEIYYNRIRRHSTNGWLSPEAFEQKY 272
IEI+YNR RRHS G +SP AF +KY
Sbjct 242 IEIFYNRQRRHSRLGNISPAAFREKY 267
>P35878 Transposase for insertion sequence element IS904 [Lactococcus
lactis subsp. lactis (strain IL1403)]
Length=253
Score = 187 bits (475), Expect = 6e-62
Identities = 99/233 (42%), Positives = 145/233 (62%), Gaps = 2/233 (1%)
Query 39 LKAVYWQHHARLGAPSLVHDMHDLGYSMSERTVGRMLKKLGLRSKIAR-KYKHTTDSNHR 97
+KAV+ +H R GA + +H+ G + + VG+++ +GL +K +R KYKH
Sbjct 19 IKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGAS 78
Query 98 LPTAPNLLDRQFTVNEPNKIWTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQ 157
L + PNL+++ F PNK+W D+TYI TK+G LYL V +D+FSR+IVGW S R+ +
Sbjct 79 L-SRPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDK 137
Query 158 LVCDAFHYAMARQGYPMGVMVHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTE 217
LV D F A ++ G++VH+DQGSQY S +++ L SMSR+GN +DNA+ E
Sbjct 138 LVRDCFLQACGKEHPQPGLIVHTDQGSQYTSSRYQSTLRQVGAQSSMSRKGNPYDNAMME 197
Query 218 SFFHTLKGHMVHGSVFATRKEANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQ 270
SF+ TLK +++ + F TR EA +F YIE YYN R HS + SP+ FE+
Sbjct 198 SFYKTLKRELINDAHFETRAEATQEIFKYIETYYNTKRMHSGLDYKSPKDFEK 250
>P19769 Putative transposase InsK for insertion sequence element
IS150 [Escherichia coli (strain K12)]
Length=283
Score = 119 bits (298), Expect = 2e-35
Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 5/223 (2%)
Query 35 KYNDLKA----VYWQHHARLGAPSLVHDMHDLGYSMSERTVGRMLKKLGLRSKIARKYKH 90
KY D+K +Y ++ R G + +H G ++ + V R++ L L++ I K ++
Sbjct 39 KYADVKKRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVK-RY 97
Query 91 TTDSNHRLPTAPNLLDRQFTVNEPNKIWTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQT 150
+ TAPN+L R F PN+ W TD+T LYL ++DLF+ ++ +
Sbjct 98 RSYRGEVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSL 157
Query 151 SHRIDRQLVCDAFHYAMARQGYPMGVMVHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNC 210
S R +V + A + ++HSDQG QY R ++ +L + QSMSR+GNC
Sbjct 158 SERPVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNC 217
Query 211 WDNAVTESFFHTLKGHMVHGSVFATRKEANAVLFDYIEIYYNR 253
DNAV E FF TLK + F+ E + +YIE Y +R
Sbjct 218 LDNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSR 260
>P16942 Transposase for insertion sequence element IS629 [Shigella
sonnei]
Length=296
Score = 115 bits (288), Expect = 9e-34
Identities = 80/280 (29%), Positives = 136/280 (49%), Gaps = 15/280 (5%)
Query 8 VSSACKCLGVSTSGYYAWRK------RQTNLAQKYNDLKA----VYWQHHARLGAPSLVH 57
V C L ++ S YY ++ +++ AQ+ + LK VY ++H G +
Sbjct 14 VGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWR 73
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
+ G ++ TV R++ +GL + K TT S + A + ++RQF P+++
Sbjct 74 QLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAV-AAGDRVNRQFVAERPDQL 132
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAM-ARQGYPMGV 176
W D TY+ T QG++Y+ ++D+F+ IVGW+ S ++ V DA A+ AR+ P G
Sbjct 133 WVADFTYVSTWQGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQALWARR--PSGT 190
Query 177 MVHSDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATR 236
+ HSD+GSQY S + L + S G+ +DNA+ ES K ++H + R
Sbjct 191 VHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAKVIHRKSWKNR 250
Query 237 KEANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQKYFKNL 276
E +++ Y NR R G P E+ Y+ ++
Sbjct 251 AEVELATLTWVDWYNNR-RLLERLGHTPPAEAEKAYYASI 289
>O05086 Uncharacterized transposase-like protein HI_1721 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=216
Score = 109 bits (272), Expect = 3e-32
Identities = 71/202 (35%), Positives = 107/202 (53%), Gaps = 7/202 (3%)
Query 66 MSERTVGRMLKKLGLRSKI-ARKYK-HTTDSNHRLPTAPNLLDRQFTVNEPNKIWTTDIT 123
++ + V R+++ LGL+ K +KY+ + + H A NLL R FT +PN+ WTTDIT
Sbjct 11 INHKKVQRIMQWLGLKGKCKTQKYRSYQGEVGH---IADNLLQRDFTATQPNEKWTTDIT 67
Query 124 YIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAMARQGYPMGVMVHSDQG 183
+ +G LYL + DLF+ I+ + + + + + A+AR ++ HSDQG
Sbjct 68 EFKCAEGKLYLSPIKDLFNNEIIAYDLARSPNFEQITRMMKQAVARLEGAKPIL-HSDQG 126
Query 184 SQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRKEANAVL 243
QY ++ +L N QSMSR+GNC N+ ESFF LK +G F T ++ +
Sbjct 127 WQYQMIGYQNILRENGIQQSMSRKGNCLYNSAMESFFGRLKTECYYGKRFETFEQLEKTI 186
Query 244 FDYIEIYYNRIRRHSTNGWLSP 265
+YI YYN R LSP
Sbjct 187 HEYIH-YYNHERIQGKLKGLSP 207
Score = 17.7 bits (34), Expect = 4.8
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 0/32 (0%)
Query 60 HDLGYSMSERTVGRMLKKLGLRSKIARKYKHT 91
+DL S + + RM+K+ R + A+ H+
Sbjct 92 YDLARSPNFEQITRMMKQAVARLEGAKPILHS 123
>Q47718 Putative transposase InsO for insertion sequence element
IS911B [Escherichia coli (strain K12)]
Length=198
Score = 99.4 bits (246), Expect = 1e-28
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 5/133 (4%)
Query 47 HARLGAPSLVHDMHDLGYSMSERTVGRMLKKLGLRS--KIARKYKHTTDSNHRLPTAPNL 104
H GA S+ GY M GR++K+LGL S + +YK H PN
Sbjct 43 HGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKR---GGHEHVAIPNY 99
Query 105 LDRQFTVNEPNKIWTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFH 164
L+RQF V EPN++W D+TYI T + W YL V+LDLF+R+ VGW S D +L A
Sbjct 100 LERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE 159
Query 165 YAMARQGYPMGVM 177
A +G P+GVM
Sbjct 160 MAWETRGKPVGVM 172
>P9WKH8 Putative transposase for insertion sequence element IS986/IS6110
[Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)]
Length=278
Score = 92.8 bits (229), Expect = 2e-25
Identities = 63/253 (25%), Positives = 121/253 (48%), Gaps = 7/253 (3%)
Query 27 KRQTNLAQKYNDLKAVYWQHHARLGAPSLVHDMHDLGYSMSERTVGRMLKKLGLRSKIAR 86
+R+ + + V+ ++ GA + ++ G ++ TV R++ KLGL
Sbjct 18 RRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRG 77
Query 87 KYKHTTDSNHRLPTAPNLLDRQFTVNEPNKIWTTDITYIRTKQGWLYLCVMLDLFSRRIV 146
K + TT ++ +L+ R+F PN++W D+TY+ T G+ Y+ + D ++RRI+
Sbjct 78 KARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRIL 137
Query 147 GWQTSHRIDRQLVCDAFHYAM-ARQGYPM----GVMVHSDQGSQYCSRDFRALLLTNNCV 201
GW+ + + +V DA A+ RQ + V+ H+D+GSQY S F L
Sbjct 138 GWRVASTMATSMVLDAIEQAIWTRQQESVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQ 197
Query 202 QSMSRRGNCWDNAVTESFFHTLKGHMVH-GSVFATRKEANAVLFDYIEIYYNRIRRHSTN 260
S+ G+ +DNA+ E+ K ++ G + + ++ +++ ++N R +
Sbjct 198 PSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVD-WFNHRRLYQYC 256
Query 261 GWLSPEAFEQKYF 273
G + P E Y+
Sbjct 257 GDVPPVELEAAYY 269
>P59800 Putative transposase for insertion sequence element IS986/IS6110
[Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)]
Length=278
Score = 92.4 bits (228), Expect = 2e-25
Identities = 63/253 (25%), Positives = 121/253 (48%), Gaps = 7/253 (3%)
Query 27 KRQTNLAQKYNDLKAVYWQHHARLGAPSLVHDMHDLGYSMSERTVGRMLKKLGLRSKIAR 86
+R+ + + V+ ++ GA + ++ G ++ TV R++ KLGL
Sbjct 18 RRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRG 77
Query 87 KYKHTTDSNHRLPTAPNLLDRQFTVNEPNKIWTTDITYIRTKQGWLYLCVMLDLFSRRIV 146
K + TT ++ +L+ R+F PN++W D+TY+ T G+ Y+ + D ++RRI+
Sbjct 78 KARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRIL 137
Query 147 GWQTSHRIDRQLVCDAFHYAM-ARQGYPM----GVMVHSDQGSQYCSRDFRALLLTNNCV 201
GW+ + + +V DA A+ RQ + V+ H+D+GSQY S F L
Sbjct 138 GWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQ 197
Query 202 QSMSRRGNCWDNAVTESFFHTLKGHMVH-GSVFATRKEANAVLFDYIEIYYNRIRRHSTN 260
S+ G+ +DNA+ E+ K ++ G + + ++ +++ ++N R +
Sbjct 198 PSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVD-WFNHRRLYQYC 256
Query 261 GWLSPEAFEQKYF 273
G + P E Y+
Sbjct 257 GDVPPVELEAAYY 269
>P9WKH9 Putative transposase for insertion sequence element IS986/IS6110
[Mycobacterium tuberculosis (strain ATCC 25618 /
H37Rv)]
Length=278
Score = 92.4 bits (228), Expect = 2e-25
Identities = 63/253 (25%), Positives = 121/253 (48%), Gaps = 7/253 (3%)
Query 27 KRQTNLAQKYNDLKAVYWQHHARLGAPSLVHDMHDLGYSMSERTVGRMLKKLGLRSKIAR 86
+R+ + + V+ ++ GA + ++ G ++ TV R++ KLGL
Sbjct 18 RRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRG 77
Query 87 KYKHTTDSNHRLPTAPNLLDRQFTVNEPNKIWTTDITYIRTKQGWLYLCVMLDLFSRRIV 146
K + TT ++ +L+ R+F PN++W D+TY+ T G+ Y+ + D ++RRI+
Sbjct 78 KARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRIL 137
Query 147 GWQTSHRIDRQLVCDAFHYAM-ARQGYPM----GVMVHSDQGSQYCSRDFRALLLTNNCV 201
GW+ + + +V DA A+ RQ + V+ H+D+GSQY S F L
Sbjct 138 GWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQ 197
Query 202 QSMSRRGNCWDNAVTESFFHTLKGHMVH-GSVFATRKEANAVLFDYIEIYYNRIRRHSTN 260
S+ G+ +DNA+ E+ K ++ G + + ++ +++ ++N R +
Sbjct 198 PSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVD-WFNHRRLYQYC 256
Query 261 GWLSPEAFEQKYF 273
G + P E Y+
Sbjct 257 GDVPPVELEAAYY 269
>A5TY79 Putative transposase for insertion sequence element IS986/IS6110
[Mycobacterium tuberculosis (strain ATCC 25177 /
H37Ra)]
Length=278
Score = 92.4 bits (228), Expect = 2e-25
Identities = 63/253 (25%), Positives = 121/253 (48%), Gaps = 7/253 (3%)
Query 27 KRQTNLAQKYNDLKAVYWQHHARLGAPSLVHDMHDLGYSMSERTVGRMLKKLGLRSKIAR 86
+R+ + + V+ ++ GA + ++ G ++ TV R++ KLGL
Sbjct 18 RRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRG 77
Query 87 KYKHTTDSNHRLPTAPNLLDRQFTVNEPNKIWTTDITYIRTKQGWLYLCVMLDLFSRRIV 146
K + TT ++ +L+ R+F PN++W D+TY+ T G+ Y+ + D ++RRI+
Sbjct 78 KARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRIL 137
Query 147 GWQTSHRIDRQLVCDAFHYAM-ARQGYPM----GVMVHSDQGSQYCSRDFRALLLTNNCV 201
GW+ + + +V DA A+ RQ + V+ H+D+GSQY S F L
Sbjct 138 GWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQ 197
Query 202 QSMSRRGNCWDNAVTESFFHTLKGHMVH-GSVFATRKEANAVLFDYIEIYYNRIRRHSTN 260
S+ G+ +DNA+ E+ K ++ G + + ++ +++ ++N R +
Sbjct 198 PSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVD-WFNHRRLYQYC 256
Query 261 GWLSPEAFEQKYF 273
G + P E Y+
Sbjct 257 GDVPPVELEAAYY 269
>P11257 Transposase for insertion sequence element IS3411 [Escherichia
coli]
Length=240
Score = 73.9 bits (180), Expect = 7e-19
Identities = 47/170 (28%), Positives = 86/170 (51%), Gaps = 11/170 (6%)
Query 8 VSSACKCLGVSTSGYYAWRK------RQTNLAQKYNDLKA----VYWQHHARLGAPSLVH 57
V C L ++ S YY ++ +++ AQ+ + LK VY ++H G +
Sbjct 14 VGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKQIQRVYDENHKVYGVRKVWR 73
Query 58 DMHDLGYSMSERTVGRMLKKLGLRSKIARKYKHTTDSNHRLPTAPNLLDRQFTVNEPNKI 117
+ G ++ TV R++ +GL + K TT S + A + ++RQF P+++
Sbjct 74 QLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAV-AAGHRVNRQFVAERPDQL 132
Query 118 WTTDITYIRTKQGWLYLCVMLDLFSRRIVGWQTSHRIDRQLVCDAFHYAM 167
W D TY+ T +G++Y+ ++D+F+ IVGW+ S ++ V DA A+
Sbjct 133 WVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSMETTFVLDALEQAL 182
>Q06715 ATP-dependent protease [Lactococcus lactis subsp. lactis]
Length=310
Score = 72.4 bits (176), Expect = 5e-18
Identities = 39/95 (41%), Positives = 53/95 (56%), Gaps = 0/95 (0%)
Query 180 SDQGSQYCSRDFRALLLTNNCVQSMSRRGNCWDNAVTESFFHTLKGHMVHGSVFATRKEA 239
S QGSQ+ S FR LL + + S S+ G +DNAVTE FF LK ++ + + +E
Sbjct 93 SKQGSQFKSASFRKLLDEHQLLASYSKPGYPYDNAVTEVFFKYLKQREINRRTYHSIQEV 152
Query 240 NAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQKYFK 274
F+YIE +YN HS N L+P E+ YFK
Sbjct 153 QLSCFEYIEQFYNNYNPHSANNGLTPNQKEENYFK 187
Score = 19.6 bits (39), Expect = 1.2
Identities = 9/39 (23%), Positives = 17/39 (44%), Gaps = 0/39 (0%)
Query 233 FATRKEANAVLFDYIEIYYNRIRRHSTNGWLSPEAFEQK 271
F + + + F E YN+++ LSP + +K
Sbjct 30 FKFKNQTKYIQFRLSEEQYNKLKISGETYGLSPNLYAKK 68
Lambda K H a alpha
0.325 0.136 0.436 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 987618
Database: f1e19bb32307a749409b81a368b9ca72.SwissProt.fasta
Posted date: May 9, 2024 8:37 AM
Number of letters in database: 4,908
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
