BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: aa9ba6040689816832aeee3052fdd511.SwissProt.fasta
10 sequences; 12,531 total letters
Query= ACIAD0965
Length=644
Score E
Sequences producing significant alignments: (Bits) Value
P09489 Extracellular serine protease [Serratia marcescens] 72.0 6e-16
P29805 Extracellular serine protease [Serratia marcescens] 67.8 1e-14
P31631 Serotype-specific antigen 1 [Mannheimia haemolytica] 63.2 3e-13
Q934J6 Non-specific acid phosphatase [Salmonella typhi] 58.2 3e-12
P26976 Non-specific acid phosphatase [Salmonella typhimurium (str... 55.8 2e-11
A0A0H3GGE2 Adhesin BmaC autotransporter [Brucella suis biovar 1 (... 55.1 1e-10
Q53020 Outer membrane protein B [Rickettsia prowazekii (strain Ma... 43.1 6e-07
P45508 Probable autotransporter YfaL [Escherichia coli (strain K12)] 42.0 1e-06
Q9JMS3 Uncharacterized protein YuaQ [Escherichia coli (strain K12)] 38.5 1e-05
P32051 Uncharacterized lipoprotein YdeK [Escherichia coli (strain... 38.1 2e-05
>P09489 Extracellular serine protease [Serratia marcescens]
Length=1045
Score = 72.0 bits (175), Expect = 6e-16
Identities = 49/166 (30%), Positives = 79/166 (48%), Gaps = 34/166 (20%)
Query 415 GAEVLLETRFPYLTANQRRVVLKSTAIASGYPVMDDAEGYGRLNLFKAGAGY-------- 466
G +L RFPY++A+Q V+K+TA G +D+ G+GR+NL A G
Sbjct 349 GVAAVLMQRFPYMSADQISAVIKTTATDLGVAGIDNLFGWGRVNLRDAINGPKMFITKED 408
Query 467 --------GNFNGDVTLTMDASLGGFNQ---------------YDQWSNDISGAGKLTKL 503
G+++ + LG + +D WSNDISG G LTK
Sbjct 409 IPQEYYVPGSYSEKQFVVNIPGLGNIVEPGTPVERRCTSSECSFDSWSNDISGHGGLTKT 468
Query 504 GTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLN 549
G GTL L GNN++ G + QG +++ + + ++Y+ + +L+
Sbjct 469 GAGTLALLGNNTYRGDTWVKQGVLAI---DGSVASNVYIENSGTLS 511
>P29805 Extracellular serine protease [Serratia marcescens]
Length=1045
Score = 67.8 bits (164), Expect = 1e-14
Identities = 52/173 (30%), Positives = 76/173 (44%), Gaps = 34/173 (20%)
Query 407 TRIANVPKGAEVLLETRFPYLTANQRRVVLKSTAIASGYPVMDDAEGYGRLNLFKA---- 462
T +A G +L RFPY++A Q V+K+TA G +D G+GR+NL A
Sbjct 340 TSMAPDVTGFAAVLMQRFPYMSAAQISAVIKTTATDLGEVGIDHLFGWGRVNLRDAINGP 399
Query 463 ----------------GA-----------GYGNFNGDVTLTMDASLGGFNQYDQWSNDIS 495
G+ G GN T G +D WSNDI
Sbjct 400 KMFITQEDIPQEFYVPGSYSEKQFVVNIPGLGNIVEAGTPVERRCTSGECDFDSWSNDIR 459
Query 496 GAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSL 548
G G LTK G GTL + GNN+++G + QG +L N + ++Y+ + ++
Sbjct 460 GHGGLTKTGAGTLAVLGNNTYSGDTWVKQG---VLAYNGSVASNVYIENSGTV 509
Score = 25.4 bits (54), Expect = 0.15
Identities = 43/190 (23%), Positives = 72/190 (38%), Gaps = 21/190 (11%)
Query 98 AGVSAEARDGFPAVKASNWTGIPGDSTDGTKKNSDVLNYNIHYSVQTTHNRTADDAIRAY 157
AG++A RDG S G+ D+ K +D N N + + R +++
Sbjct 117 AGIAAAKRDG------SGMHGVAYDADIIGTKLNDYGNRNGREELIQSAARVINNSWGIR 170
Query 158 LDDRRGKSYSVTTGLGALTD--PWRKLTGQTTTINAVPSDAQQVKYDDQ-----GNNSGL 210
D RR + D W K T IN V + +++ + G +S +
Sbjct 171 PDIRRDAKGDIIWLPNGRPDYVAWVK----TDVINEVMRNKSNLEWGSEQPVPTGGHSAM 226
Query 211 TTAEGNTDFGLVVEFVKSMADNASTEPAKRFYKYARPYRWSSDVIVVPSLESAKSSTPAT 270
T G ++ F +N + A++ YA P ++ +IV + K S +T
Sbjct 227 ATLLRAAKHGKLIVFSAGNYNNYNIPEAQKSLPYAFPEVLNNYLIVTNLSNNDKLSVSST 286
Query 271 DGGFPSGHTA 280
GHTA
Sbjct 287 S----CGHTA 292
Score = 19.6 bits (39), Expect = 8.8
Identities = 16/58 (28%), Positives = 27/58 (47%), Gaps = 10/58 (17%)
Query 163 GKSYSVTTGLGALTDPWRKLTGQTTTINAVPS-DAQQVKYDDQGNNSGLTTAEGNTDF 219
G +Y++ T L +T + NA PS +V D +GN++GL + + F
Sbjct 596 GNNYTILTTLDGVTGRFD---------NANPSYPFVKVALDYRGNDTGLGITKTDATF 644
>P31631 Serotype-specific antigen 1 [Mannheimia haemolytica]
Length=932
Score = 63.2 bits (152), Expect = 3e-13
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 31/167 (19%)
Query 419 LLETRFPYLTANQRRVVLKSTAIASGYPVMDDAEGYGRLNLFKAGAGYGNFNGDVTLTMD 478
+L+ RF YLTA Q R L +TA G +D+ G+G +NL KA G F D T+T+
Sbjct 363 VLKERFDYLTATQIRDTLLTTATDLGEKGVDNVYGWGLINLKKAVNGPTQFLNDETITV- 421
Query 479 ASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTK------ 532
+ D WSN ++ K+TK G +L L+G N + + +G ++L K
Sbjct 422 ------TRDDHWSNPLASQFKITKKGDKSLHLDGENHL-DTVAVEEGRLALNGKTKVKTI 474
Query 533 -----------------NAAGQGDIYVRGNSSLNINANKTVNIGTNL 562
+++GQ + V G S L NA +++ +L
Sbjct 475 SNHANLAVNGTEVEQNYSSSGQSQLEVLGKSGLIANAQANIHLAGSL 521
>Q934J6 Non-specific acid phosphatase [Salmonella typhi]
Length=250
Score = 58.2 bits (139), Expect = 3e-12
Identities = 34/93 (37%), Positives = 48/93 (52%), Gaps = 4/93 (4%)
Query 234 STEPAKRFYKYARPYRWSSDVIVVPSLESAKSSTPATDGGFPSGHTAEAGRNAIAMAYLI 293
+T AK++Y RP+ + P E+ T DG +PSGHTA + A+ ++
Sbjct 118 ATASAKKYYMRTRPFVLFNHSTCRPEDEN----TLRKDGSYPSGHTAYSTLLALVLSQAR 173
Query 294 PQRYQELIARAMDLGNSRIIAGMHSALDVVGGR 326
P+R QEL R + G SR+I G H DV GR
Sbjct 174 PERAQELARRGWEFGQSRVICGAHWQSDVDAGR 206
>P26976 Non-specific acid phosphatase [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=250
Score = 55.8 bits (133), Expect = 2e-11
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query 228 SMADNASTEPAKRFYKYARPYRWSSDVIVVPSLESAKSSTPATDGGFPSGHTAEAGRNAI 287
+M +T AK++Y RP+ + P E+ T +G +PSGHTA A+
Sbjct 112 TMGGYYATASAKKYYMRTRPFVLFNHSTCRPEDEN----TLRKNGSYPSGHTAYGTLLAL 167
Query 288 AMAYLIPQRYQELIARAMDLGNSRIIAGMHSALDVVGGR 326
++ P+R QEL R + G SR+I G H DV GR
Sbjct 168 VLSEARPERAQELARRGWEFGQSRVICGAHWQSDVDAGR 206
>A0A0H3GGE2 Adhesin BmaC autotransporter [Brucella suis biovar
1 (strain 1330)]
Length=3420
Score = 55.1 bits (131), Expect = 1e-10
Identities = 43/108 (40%), Positives = 57/108 (53%), Gaps = 9/108 (8%)
Query 462 AGAGYGNFN-GDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGI 520
+G G GN N G TLT+ S ++ ++G+G L K GT TL L G +SFTG
Sbjct 595 SGTG-GNVNLGGATLTVKGSTS-----TDFAGSMTGSGNLLKQGTSTLTLTGASSFTGDT 648
Query 521 DITQGAISLLTKNAAGQGDIYVRGNSSLNINANKTVNIGTNLTQLANS 568
I GAISL KNA D + +S+LN+ A T N+ + ANS
Sbjct 649 TINGGAISLNFKNATALTDNILSTSSTLNL-AGGTFNV-IGMDNAANS 694
Score = 52.0 bits (123), Expect = 1e-09
Identities = 47/159 (30%), Positives = 70/159 (44%), Gaps = 25/159 (16%)
Query 471 GDVTLTMDASLGGFNQYDQ---WSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQG-- 525
G VT+ + ++ FN D +S ISGAG +++ G G L GNNS+ G +T G
Sbjct 2464 GTVTMAVGSNQINFNHDDASTTFSATISGAGSVSQNGPGATLLTGNNSYAGLTTVTAGSL 2523
Query 526 --------AISLLTKNAAGQ--------GDIYVRGNSSLNIN----ANKTVNIGTNLTQL 565
A L T N G GD+ V ++N A T+NI +LT
Sbjct 2524 YIDGDQSMATGLTTVNPGGTLGGTGTIGGDVTVASGGAINPGSFGMAPGTLNINGDLTLA 2583
Query 566 ANSTLAIHFKTAAQPALRVANIANLNGILKVTTTNNLPT 604
+ ST + F A P + ++ N+ G L + T + T
Sbjct 2584 SGSTQSFSFGQANIPGGPLNDLINVGGDLVLAGTLQVDT 2622
Score = 51.2 bits (121), Expect = 2e-09
Identities = 39/126 (31%), Positives = 60/126 (48%), Gaps = 15/126 (12%)
Query 441 IASGYPVMDDAEGYGRLNLFKAGAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKL 500
+ GY V DA +NL A +G D + GG + +I+GA +L
Sbjct 2755 VTDGYIVNGDA-----INLVGA-------SGSTIRVGDGTTGGTDTVASIDAEITGASQL 2802
Query 501 TKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAG--QGDIYVRGNSSLNINANKTVNI 558
K GTL L G+NS+TGG IT G + + +A G G++ + G +LN A+ T++
Sbjct 2803 IKADMGTLILTGDNSYTGGTKITGGTLQVAKDSALGARTGELILDG-GTLNTTADMTIDR 2861
Query 559 GTNLTQ 564
+ Q
Sbjct 2862 SVTVDQ 2867
Score = 46.2 bits (108), Expect = 7e-08
Identities = 52/182 (29%), Positives = 77/182 (42%), Gaps = 20/182 (11%)
Query 463 GAGYGNFNGDVTLTMDASLGG-FNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGID 521
G G +GDV LT +LGG F + + +SG G L G G+ L+ N+FTG +
Sbjct 495 GTGALTLSGDVALTGTLTLGGSFAGTNTLAGTVSGTGNLRVDGAGSWILSSANTFTGDVG 554
Query 522 ITQGAISLLTKNAAGQGDIYVRGN-SSLNINANKTV-----NIGTNLTQLANSTLAIHFK 575
+ G + + A G N +L++ A T G N+ L +TL +
Sbjct 555 VNSGTLVVGNMQALGTTPKAATVNGGTLDLGAFDTTLSSLSGTGGNV-NLGGATLTVKGS 613
Query 576 TAAQPALRVANIANLNGILKVTTTNNLPTGTYTLLSAKKLQGSYQKVTLNGQDITPVYQN 635
T+ A + NL LK T+ T TL A G T+NG I+ ++N
Sbjct 614 TSTDFAGSMTGSGNL---LKQGTS------TLTLTGASSFTGD---TTINGGAISLNFKN 661
Query 636 NT 637
T
Sbjct 662 AT 663
Score = 46.2 bits (108), Expect = 7e-08
Identities = 53/172 (31%), Positives = 75/172 (44%), Gaps = 20/172 (12%)
Query 465 GYGNFNGDVTLTMDASLGG--FNQYD--QWSNDISGAGKLTKLGTGTLGLNGNNSFTGGI 520
G G G +T + + GG FN+ D + ISGAG +T+ G+GT L G NS+TG
Sbjct 1697 GNGGTTGSLTSDIVVTDGGLIFNRSDTLNYGGLISGAGFVTQSGSGTTILTGANSYTGAT 1756
Query 521 DITQGAISLLTKNAAGQGDIYVRGNSSLN----INANKTVNIGTNL-------TQLANST 569
++ G + + +A G V S L I N V G T N +
Sbjct 1757 SVSAGTLLVNGDQSAATGQTSVANGSILGGSGIIGGNVVVTDGALAPGSNGAGTLTINGS 1816
Query 570 LAIHFKTAAQPALRVANIAN--LNGILKVTTTNNLPTGTYTLLSAKKLQGSY 619
LA+ + L A +A LN +++V NL T TL A+ GSY
Sbjct 1817 LALSAGSILSMQLGQAGVAGGALNDLIEV--KGNL-TLDGTLDVAETAGGSY 1865
Score = 44.3 bits (103), Expect = 3e-07
Identities = 38/118 (32%), Positives = 53/118 (45%), Gaps = 20/118 (17%)
Query 460 FKAGAGYGNF---NGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSF 516
F GAG G+ N TL+M S G G LTKLG GTL L+G N++
Sbjct 1069 FTLGAGNGSIGVANAGTTLSM-------------SGTAVGTGGLTKLGDGTLILSGTNTY 1115
Query 517 TGGIDITQGAISLLTKNAAGQGDIYVRGN-SSLNINA-NKTVN--IGTNLTQLANSTL 570
TG + G + + A G + GN +SL + + TV+ +G L +TL
Sbjct 1116 TGNTAVNAGVLRAGSAQAFGPSGLMTVGNGASLELGGYDITVSGLLGAGTVDLGGNTL 1173
Score = 44.3 bits (103), Expect = 3e-07
Identities = 39/137 (28%), Positives = 68/137 (50%), Gaps = 16/137 (12%)
Query 490 WSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLN 549
++ ISG G LTK G+ TL + G +++TG ++ G ++L A GQ ++G +SL
Sbjct 2180 YTGSISGTGTLTKNGSSTLTMTGTSTYTGETTVSAGTLAL---QAGGQ----IKGTASLT 2232
Query 550 INANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLNGILKVTTTNNLPTGTYTL 609
++ V I + +Q A A T +R A+ + + TT+N TGT +
Sbjct 2233 VDGGAEVLIDGSGSQFATGAGASVVGTGT-VTVRDGGTASFDSL---TTSN--ATGTNST 2286
Query 610 LSAKKLQGSYQKVTLNG 626
++ + GS ++T G
Sbjct 2287 IT---VAGSGSQMTQTG 2300
Score = 43.5 bits (101), Expect = 5e-07
Identities = 33/88 (38%), Positives = 43/88 (49%), Gaps = 6/88 (7%)
Query 491 SNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNI 550
S ISG G LTK GTGTL L+G TGG IT G + + G D + N +L
Sbjct 2113 SGPISGTGALTKSGTGTLLLSGTAVHTGGTTITAGTLQIGNGGTDGSIDGNIVNNGALVF 2172
Query 551 NANKTVNI-----GT-NLTQLANSTLAI 572
+ T+ GT LT+ +STL +
Sbjct 2173 DRAGTLAYTGSISGTGTLTKNGSSTLTM 2200
Score = 38.9 bits (89), Expect = 1e-05
Identities = 19/51 (37%), Positives = 27/51 (53%), Gaps = 0/51 (0%)
Query 490 WSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDI 540
+S + G G L K GTGTL L +NS+ GG + G + + A G G +
Sbjct 1286 FSGQVVGTGALQKRGTGTLVLMNSNSYRGGTSVDAGTLRAGSSGAFGGGSM 1336
Score = 38.5 bits (88), Expect = 2e-05
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query 494 ISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAG--QGDIYVRGNSSLN 549
++G LTK G G L L G N+F+G I +T G +S+ + A G +I + + LN
Sbjct 177 LAGTNGLTKAGDGILSLTGANTFSGNIIVTGGTLSVNSSAALGAAANEISLANGAGLN 234
Score = 38.5 bits (88), Expect = 2e-05
Identities = 33/105 (31%), Positives = 51/105 (49%), Gaps = 9/105 (9%)
Query 494 ISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAG--QGDIYVRG---NSSL 548
++G +L K GTL L G NS+TGG I G I + + + G DI G N++
Sbjct 2027 LTGNTQLEKTDAGTLVLTGANSYTGGTAINGGTIRISSDDNLGVASSDISFDGGALNTTA 2086
Query 549 NINANKTV---NIGTNLTQLANSTLAIHFKTAAQPALRVANIANL 590
NI ++ + GT LT A++TL++ + AL + L
Sbjct 2087 NIATDRAIILTGAGTLLTD-ASTTLSLSGPISGTGALTKSGTGTL 2130
Score = 36.6 bits (83), Expect = 6e-05
Identities = 46/197 (23%), Positives = 74/197 (38%), Gaps = 17/197 (9%)
Query 438 STAIASGYPVMDDAEGYGRLNLFKAGAGYGNFNGDVTLTMDASLG------GFNQY---- 487
+TA+ +G A+ +G L G G G +T+ LG G N
Sbjct 1118 NTAVNAGVLRAGSAQAFGPSGLMTVGNGASLELGGYDITVSGLLGAGTVDLGGNTLTSSG 1177
Query 488 ---DQWSNDISGAGKLTKLGTGTLGLNG-NNSFTGGIDI-TQGAISL-LTKNAAGQGDIY 541
+ ++ I+G G T+ G T L+G N+ +TG I + G +S+ KN I
Sbjct 1178 SAANSFTGKITGTGGFTRTGGSTQTLSGCNSDYTGKTTIASNGTLSVDCLKNGGQASSIG 1237
Query 542 VRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLNG-ILKVTTTN 600
N+ N+ N T T + I T A A +G ++
Sbjct 1238 ASSNAPDNLVLNNGTLSYTGNTVTTDRGFTIQGGTGAISVTDAATTLTFSGQVVGTGALQ 1297
Query 601 NLPTGTYTLLSAKKLQG 617
TGT L+++ +G
Sbjct 1298 KRGTGTLVLMNSNSYRG 1314
Score = 35.8 bits (81), Expect = 1e-04
Identities = 31/87 (36%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query 480 SLGGFNQYDQW---SNDISGAGKLT--KLGTGTLGLNGNNSFTGGIDITQGAISLLTKNA 534
+LGG N D S +G GK T K GT L GNN+FTG +I +G + +
Sbjct 1642 ALGGKNTGDNTLAGSIGDAGTGKTTLAKNDDGTWVLTGNNTFTGPTNINKGLLKIGNGGT 1701
Query 535 AGQ--GDIYVRGNSSLNINANKTVNIG 559
G DI V + L N + T+N G
Sbjct 1702 TGSLTSDIVVT-DGGLIFNRSDTLNYG 1727
Score = 32.0 bits (71), Expect = 0.002
Identities = 44/178 (25%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query 450 DAEGYGRLNLFKAGAG--YGNFNGDVTLTMDASLGGFNQYD-QWSNDISGAGKLTKLGTG 506
++EG G + LF + A + N TLT+ + N+ Q +N+ SG LTK TG
Sbjct 1480 ESEGTGAI-LFTSNAAVTFAAANTAQTLTLAGTNTDDNELGAQLTNNGSGITSLTKTDTG 1538
Query 507 TLGL-NGNNSFTGGIDITQGAISL-----------LTKNAAGQGDIYVRGNSSLNI---- 550
T L N ++++TG I G +S+ + +++ ++ + +S+L
Sbjct 1539 TWFLTNSDSTYTGVTKINGGVLSVDKLANGGLASSIGASSSAASNLIIGNDSTLRYLGTG 1598
Query 551 -NANKTVNIGTNLTQLANS-TLAIHFKTAAQPALRVANIANLNGILKVTTTNNLPTGT 606
++ + + LT + +S + AI F Q AL N A + T +N G+
Sbjct 1599 DTTDRLFTLASGLTYIESSGSGAIVFTDTGQVALADNNQARTIALGGKNTGDNTLAGS 1656
Score = 31.2 bits (69), Expect = 0.003
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 18/140 (13%)
Query 494 ISGAGKLTKLGTGTLGLNG-NNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNINA 552
+SGAG K G G L L G ++++ G I G ++ LT G ++ + G
Sbjct 2885 LSGAGAFVKTGAGRLELAGDDHTYNGDASIASGTLA-LTGALGGTMNVGIDGRLEATGRV 2943
Query 553 NKTVNIGT-NLTQLANSTLAIHFK-TAAQPALRVANI--------------ANLNGILKV 596
T N G L Q +L ++ T L +A + ++ G +V
Sbjct 2944 GATTNSGVIALDQEGFGSLTVNGNYTGKDGRLEIATVLGDDTSLTNRLVIDGDMAGTTQV 3003
Query 597 TTTNNLPTGTYTLLSAKKLQ 616
+ TN G T+ K +Q
Sbjct 3004 SVTNRGGLGAQTVEGIKIIQ 3023
Score = 28.9 bits (63), Expect = 0.014
Identities = 14/44 (32%), Positives = 24/44 (55%), Gaps = 0/44 (0%)
Query 493 DISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAG 536
D GA TK G G++ L G N+++G ++ G +++ AG
Sbjct 885 DNGGAIGFTKAGAGSVTLTGQNTYSGVTTLSGGILTVTQMANAG 928
Score = 28.5 bits (62), Expect = 0.018
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query 464 AGYGNFNGDVTL---TMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNG-NNSFTGG 519
+G G G+V L T+ S G N ++ I+G G K G GT L G +S++G
Sbjct 1359 SGGGALGGNVALGGATLTISSGNSNG-TSYTGAITGIGNFVKNGNGTQRLTGCASSYSGS 1417
Query 520 IDITQGAI 527
I G +
Sbjct 1418 TTINGGVL 1425
Score = 27.7 bits (60), Expect = 0.031
Identities = 41/143 (29%), Positives = 55/143 (38%), Gaps = 19/143 (13%)
Query 470 NGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGN--NSFTGGIDITQGAI 527
+ + T S N+ Q S+ ++ G+GTL L GN N+ T
Sbjct 328 SASASATYTGSGASSNRNWQLSSRFYANSTISNRGSGTLTLTGNIFNNHTNS-------- 379
Query 528 SLLTKNA---AGQGDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPALRV 584
SL +N AG DI + G S N N V GT A T+ + A +
Sbjct 380 SLSARNINFDAGTADIELLGTISSNNNGVGVVFGGT-----AGRTIKVSGDNTFGGAAII 434
Query 585 ANIANLNGILKVT-TTNNLPTGT 606
NI G LK T + L TGT
Sbjct 435 QNITVQVGSLKNTGDPSALGTGT 457
Score = 27.7 bits (60), Expect = 0.031
Identities = 20/69 (29%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query 502 KLGTGTLG-LNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNINANKTVNIGT 560
K G GTL LNG+N + G ++ G +++ T GQ + S +A + G
Sbjct 999 KKGAGTLTFLNGSNDYIGATTVSGGTLAVSTLADGGQVSSLGKSGS----DATNLILAGG 1054
Query 561 NLTQLANST 569
L L ++T
Sbjct 1055 ALNYLGSTT 1063
Score = 25.4 bits (54), Expect = 0.16
Identities = 24/84 (29%), Positives = 34/84 (40%), Gaps = 3/84 (4%)
Query 455 GRLNLFKAGAGYGNFNGDVTLTMDASL-GGFNQYDQWSND--ISGAGKLTKLGTGTLGLN 511
G + KAGAG G T + +L GG Q +N SG G+ T + +
Sbjct 888 GAIGFTKAGAGSVTLTGQNTYSGVTTLSGGILTVTQMANAGMASGIGQSTADPANLMLES 947
Query 512 GNNSFTGGIDITQGAISLLTKNAA 535
G +TGG T +L+ A
Sbjct 948 GTFRYTGGSVTTDRGFTLVNGGPA 971
Score = 25.4 bits (54), Expect = 0.16
Identities = 43/176 (24%), Positives = 68/176 (39%), Gaps = 18/176 (10%)
Query 455 GRLNLFKAGAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNN 514
G++NL G + ++GDV ++++ G N W N SG T TG + + ++
Sbjct 1902 GQVNLLAGGTNFNFWDGDVGPKFNSAVDGGN--GTWQNS-SGNNNWTD-ATGNINASYSD 1957
Query 515 SFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHF 574
T G +++ N+ GQ + G I++ LT ST+ +
Sbjct 1958 GAFAIFTGTAGTVTI--DNSLGQ--VKAEG-MQFAIDSYAVTGDKLELTG-PQSTIRVGD 2011
Query 575 KTAAQPALRVANIANLNGILKVTT-TNNLPTGTYTLLSAKKLQGSYQKVTLNGQDI 629
T A A IA +N +L T GT L A G +NG I
Sbjct 2012 GTTA----GAAYIATINSVLTGNTQLEKTDAGTLVLTGANSYTGG---TAINGGTI 2060
Score = 25.0 bits (53), Expect = 0.20
Identities = 30/108 (28%), Positives = 41/108 (38%), Gaps = 9/108 (8%)
Query 460 FKAGAGYGNFNGDVTL----TMDASLGGFNQYDQWSND-ISGAGKLTKLGTGTLGLNGNN 514
F G N NGD+TL T S G N ND I+ G L GT + +
Sbjct 2567 FGMAPGTLNINGDLTLASGSTQSFSFGQANIPGGPLNDLINVGGDLVLAGTLQVDTSAGG 2626
Query 515 SFTGGIDITQGAISLLTKNA----AGQGDIYVRGNSSLNINANKTVNI 558
+ GI L++NA D YV+ + + IN T +
Sbjct 2627 TMDPGIYRVFNYTGTLSQNAWTVNLPSPDFYVQTSVAQQINLVNTAGL 2674
Score = 24.3 bits (51), Expect = 0.35
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query 494 ISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNINAN 553
I+G G L L TGT G + I GAI AG G + + G ++ +
Sbjct 861 ITGGGVLGVLQTGT----GTFTIQSTITDNGGAIGF---TKAGAGSVTLTGQNTYSGVTT 913
Query 554 KTVNIGTNLTQLANSTLAIHF-KTAAQPA 581
+ I T +TQ+AN+ +A ++ A PA
Sbjct 914 LSGGILT-VTQMANAGMASGIGQSTADPA 941
Score = 23.9 bits (50), Expect = 0.46
Identities = 27/112 (24%), Positives = 38/112 (34%), Gaps = 13/112 (12%)
Query 492 NDISGAGKLTKLGTG-------TLGLNGNNSF----TGGIDITQGAISLLTKNAAGQGDI 540
N + G L G+G TLG +G NS TG I T A Q
Sbjct 1448 NLVINGGVLRYTGSGDSTDRQFTLGASGGNSIESEGTGAILFTSNAAVTFAAANTAQTLT 1507
Query 541 YVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLNG 592
N+ N + N G+ +T L + F T + + +NG
Sbjct 1508 LAGTNTDDNELGAQLTNNGSGITSLTKTDTGTWFLTNSDST--YTGVTKING 1557
Score = 23.9 bits (50), Expect = 0.46
Identities = 33/146 (23%), Positives = 57/146 (39%), Gaps = 12/146 (8%)
Query 494 ISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYV--------RGN 545
++GAG L + TL L+G S TG + + LL+ A G + G
Sbjct 2096 LTGAGTLLTDASTTLSLSGPISGTGALTKSGTGTLLLSGTAVHTGGTTITAGTLQIGNGG 2155
Query 546 SSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPAL--RVANIANLNGILKVTTTNNLP 603
+ +I+ N VN G + A TLA + L ++ + G T +
Sbjct 2156 TDGSIDGN-IVNNGALVFDRA-GTLAYTGSISGTGTLTKNGSSTLTMTGTSTYTGETTVS 2213
Query 604 TGTYTLLSAKKLQGSYQKVTLNGQDI 629
GT L + +++G+ G ++
Sbjct 2214 AGTLALQAGGQIKGTASLTVDGGAEV 2239
Score = 23.1 bits (48), Expect = 0.79
Identities = 38/171 (22%), Positives = 56/171 (33%), Gaps = 20/171 (12%)
Query 462 AGAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGID 521
+G G NG TLTM G + Y G+ T + GTL L G
Sbjct 2185 SGTGTLTKNGSSTLTMT----GTSTY---------TGE-TTVSAGTLALQAGGQIKGTAS 2230
Query 522 IT-QGAISLLTKNAAGQ----GDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKT 576
+T G +L + Q V G ++ + T + + T A T +
Sbjct 2231 LTVDGGAEVLIDGSGSQFATGAGASVVGTGTVTVRDGGTASFDSLTTSNATGTNSTITVA 2290
Query 577 AAQPALRVANIANLNGILKVTTTNNLPTGTYTLLSAKKLQGSYQKVTLNGQ 627
+ + IA G+ T + L GT A G + GQ
Sbjct 2291 GSGSQMTQTGIATF-GLAGTATVDILDGGTMISSGASVFVGGQLPMDATGQ 2340
Score = 20.8 bits (42), Expect = 4.0
Identities = 21/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (6%)
Query 463 GAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGL---NGNNSFTGG 519
GAG NG + ++A+ F+ Q ++ S + K TG G+ + F GG
Sbjct 3136 GAGPSGNNG-IWARIEAAHAEFDP-KQSTSRASYDADIWKFQTGIDGMFAETASGKFIGG 3193
Query 520 IDITQGAISLLTKNAAGQGDIYVRG 544
+ + +S + G G I G
Sbjct 3194 VYVQYETVSSSVSSPFGNGSIESSG 3218
Score = 20.4 bits (41), Expect = 5.3
Identities = 15/69 (22%), Positives = 29/69 (42%), Gaps = 4/69 (6%)
Query 66 GDARYATVDTNAGVRVLSGYLDVWTPSSLFVDAGVSAEARDGFPAVKASNWTGIPGDSTD 125
G+ + T + G L+ L + F+D G++A+ + W + +STD
Sbjct 705 GNNKITTTSGSGGTLTLN--LGAINRTGGFIDFGINADTTITTTSATLGGWATV--NSTD 760
Query 126 GTKKNSDVL 134
K + V+
Sbjct 761 YAKVDGGVI 769
Score = 20.4 bits (41), Expect = 5.3
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query 474 TLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKN 533
T+T+ S Q + ++G + L GT+ +G + F GG + A +T +
Sbjct 2286 TITVAGSGSQMTQTGIATFGLAGTATVDILDGGTMISSGASVFVGG-QLPMDATGQVTIS 2344
Query 534 AAGQ-----GDIYVRGNSSLNINANKTVNIGTNLTQLANS 568
AG +Y R S+ ++ V G+ + A++
Sbjct 2345 GAGSQWTIANALYAR-RGSITVDDGGVVTAGSAVIGYADT 2383
Score = 20.0 bits (40), Expect = 6.9
Identities = 17/57 (30%), Positives = 21/57 (37%), Gaps = 2/57 (4%)
Query 552 ANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLNGILKVTTTNNLPTGTYT 608
AN TV I T N T+ + + N +L GI L TGT T
Sbjct 822 ANSTVTIAAGQTLGVNGTIIV--ANTVGNTNQTINGGSLTGITGGGVLGVLQTGTGT 876
>Q53020 Outer membrane protein B [Rickettsia prowazekii (strain
Madrid E)]
Length=1643
Score = 43.1 bits (100), Expect = 6e-07
Identities = 42/140 (30%), Positives = 61/140 (44%), Gaps = 14/140 (10%)
Query 474 TLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNG----NNSFTGGIDITQGAISL 529
TLT++ S+G + ++ T L G + +N NN G + + L
Sbjct 608 TLTINGSIGTVVANTKTLAQLNIGSSKTILNAGDVAINELVIENN---GSVQLNHNTY-L 663
Query 530 LTK--NAAGQGDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANI 587
+TK NAA QG I V + +N N T+ GTNL N IHF T A A + N+
Sbjct 664 ITKTINAANQGQIIVAADP---LNTNTTLADGTNLGSAENPLSTIHFATKAANADSILNV 720
Query 588 A-NLNGILKVTTTNNLPTGT 606
+N TTN+ G+
Sbjct 721 GKGVNLYANNITTNDANVGS 740
Score = 28.1 bits (61), Expect = 0.023
Identities = 35/141 (25%), Positives = 52/141 (37%), Gaps = 36/141 (26%)
Query 491 SNDISGAGKLT-KLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLN 549
+ND+SG G +T L N N T +T GA NS +
Sbjct 165 ANDLSGLGSITFAAAPSVLEFNLINPTTQEAPLTLGA------------------NSKIV 206
Query 550 INANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLNGILKVTTTNNLPTGTYTL 609
N T+NI Q++++T A ++ NI + G++ N+ P TL
Sbjct 207 NGGNGTLNITNGFIQVSDNTFA---------GIKTINIDDCQGLM----FNSTPDAANTL 253
Query 610 LSAKKLQGSYQKVTLNGQDIT 630
LQ + NG D T
Sbjct 254 ----NLQVGGNTINFNGIDGT 270
Score = 27.7 bits (60), Expect = 0.030
Identities = 24/86 (28%), Positives = 40/86 (47%), Gaps = 9/86 (10%)
Query 510 LNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSL--NINANKTVNIGT-NLTQLA 566
LN N GG G I LLT N I+ G S+ N + + T+N+ + N+ Q+
Sbjct 1113 LNSNVILGGGTTAINGEIDLLTNNL-----IFANGTSTWGDNTSISTTLNVSSGNIGQVV 1167
Query 567 NSTLA-IHFKTAAQPALRVANIANLN 591
+ A ++ T +++ + AN N
Sbjct 1168 IAEDAQVNATTTGTTTIKIQDNANAN 1193
Score = 26.6 bits (57), Expect = 0.068
Identities = 43/166 (26%), Positives = 63/166 (38%), Gaps = 40/166 (24%)
Query 494 ISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNIN-A 552
+ G + KL GT+ +NG + Q A L+ NA G I + G++ + +
Sbjct 479 LGNGGSIFKLADGTV-ING--------PVNQNA--LMNNNALAAGSIQLDGSAIITGDIG 527
Query 553 NKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLN-----------GILKVTTTNN 601
N VN LAN I AL ANI N G +K+T T N
Sbjct 528 NGGVNAALQHITLANDASKIL-------ALDGANIIGANVGGAIHFQANGGTIKLTNTQN 580
Query 602 ---------LPTGTYTLLSAKKLQGSYQKVTLNGQDITPVYQNNTV 638
+ T ++ A L + Q +T+NG T V T+
Sbjct 581 NIVVNFDLDITTDKTGVVDASSLTNN-QTLTINGSIGTVVANTKTL 625
Score = 21.9 bits (45), Expect = 1.8
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 0/46 (0%)
Query 467 GNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNG 512
G GD + SLG N +N + + TK GT+ L+G
Sbjct 919 GQIIGDKKNIIALSLGSDNSITVNANTLYSGIRTTKNNQGTVTLSG 964
>P45508 Probable autotransporter YfaL [Escherichia coli (strain
K12)]
Length=1250
Score = 42.0 bits (97), Expect = 1e-06
Identities = 41/158 (26%), Positives = 69/158 (44%), Gaps = 22/158 (14%)
Query 399 GFNQIADKTRIANVPKGAEVLLETRFPYLTANQRRVVLKSTAIASGYPV---MDDA---E 452
G + D + P G ++ T F TA + + ++ + Y + +DD+
Sbjct 206 GAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQN 265
Query 453 GYGRLNLFKAGAGYGN----------FNGDVTLTMDASLG-----GFNQYDQWSNDISGA 497
G ++ + AGYG+ + G +T D + G G + D + I+G
Sbjct 266 GGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGT 325
Query 498 GKLTKLGTGTLGLNG-NNSFTGGIDITQGAISLLTKNA 534
G +TK G+G L LN NN FTG + I G ++L N+
Sbjct 326 GLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNS 363
Score = 28.1 bits (61), Expect = 0.022
Identities = 22/64 (34%), Positives = 30/64 (47%), Gaps = 2/64 (3%)
Query 474 TLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNS--FTGGIDITQGAISLLT 531
TL +DA ++ I GAG+LT G+ L G S TG I + GA+ L
Sbjct 416 TLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLE 475
Query 532 KNAA 535
+AA
Sbjct 476 GDAA 479
Score = 25.8 bits (55), Expect = 0.11
Identities = 30/134 (22%), Positives = 53/134 (40%), Gaps = 26/134 (19%)
Query 399 GFNQIADKTRIANVPKGAEVLLETRFPYLTANQRRVVLKSTAIASGYPVMDDAEGYGRLN 458
G ++D +++ + +V+ T Q+ V++ I S DA G+GR
Sbjct 578 GTLMVSDNSQLGDTHYNRQVIF-------TDKQQESVME---ITSDVDTRSDAAGHGRDI 627
Query 459 LFKAGAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISG-----AGKLTKLGTGTLGLNGN 513
+A D + +DA + Q+ D SG LTK G GTL L +
Sbjct 628 EMRA---------DGEVAVDAGVD--TQWGALMADSSGQHQDEGSTLTKTGAGTLELTAS 676
Query 514 NSFTGGIDITQGAI 527
+ + + +G +
Sbjct 677 GTTQSAVRVEEGTL 690
Score = 25.8 bits (55), Expect = 0.11
Identities = 31/117 (26%), Positives = 49/117 (42%), Gaps = 16/117 (14%)
Query 472 DVTLTMDASL-GGFNQYDQWSNDISGAGKL-TKLGTGTLGLNGNNSFTGGIDITQGAISL 529
D ++ ++ASL G ++ ++ G+L T L T +L N + G + T GA+SL
Sbjct 745 DTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSL 804
Query 530 --------LTKNAAGQG------DIYVRGNSSLNINANKTVNIGTNLTQLANSTLAI 572
LT N G D + G+ S++ N N T + NS I
Sbjct 805 QNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGI 861
Score = 23.9 bits (50), Expect = 0.45
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 16/54 (30%)
Query 513 NNSFTGGIDITQGA-ISLLTKNAAGQ---------------GDIYVRGNSSLNI 550
NN+ G + + QGA SLL +N G G I+ + NS+LN+
Sbjct 72 NNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNL 125
Score = 20.4 bits (41), Expect = 5.1
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 32/150 (21%)
Query 443 SGYPVMDD-------AEGYGRLNLFKAGAGYGN-----FNGDVTLTMDASLGGFNQYDQW 490
SGY ++++ AEGYG GA Y N + D+++ S G D+
Sbjct 221 SGYTIVNNTAFTNNTAEGYG-------GAIYTNSVTAPYLIDISVDDSYSQNGGVLVDE- 272
Query 491 SNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLL--TKN------AAGQGDIYV 542
+N +G G G G + T DI G ++ T+N AG G I
Sbjct 273 NNSAAGYGDGPSSAAGGFMYLGLSEVT--FDIADGKTLVIGNTENDGAVDSIAGTGLITK 330
Query 543 RGNSSLNINANKTVNIGTNLTQLANSTLAI 572
G+ L +NA+ N T Q+ N + +
Sbjct 331 TGSGDLVLNADN--NDFTGEMQIENGEVTL 358
Score = 19.6 bits (39), Expect = 8.9
Identities = 20/65 (31%), Positives = 25/65 (38%), Gaps = 13/65 (20%)
Query 441 IASGYPVMDDAEGYGRLNLFKAGAGYGNFNGDVTLTMD----------ASLGGFNQYDQW 490
I GY D +G R N+ A N V LT A L + QY +
Sbjct 1034 IVGGY---SDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWF 1090
Query 491 SNDIS 495
SND+S
Sbjct 1091 SNDVS 1095
>Q9JMS3 Uncharacterized protein YuaQ [Escherichia coli (strain
K12)]
Length=1371
Score = 38.5 bits (88), Expect = 1e-05
Identities = 35/114 (31%), Positives = 55/114 (48%), Gaps = 11/114 (10%)
Query 489 QWSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSL 548
Q N+++G G + K G+G+L + N +++G DI G++ L GQ D V SSL
Sbjct 834 QLINNVTGTGNVRKTGSGSLTVRSNAAWSGQTDIDDGSLIL------GQSDAPVMLASSL 887
Query 549 -NINAN-KTVNIGTNLTQLANSTLAIHFKTAAQPALRV--ANIANLNGILKVTT 598
NI N K G + + NS ++ ++AA + N NG L + T
Sbjct 888 VNIAKNGKLTGFGGVVGNVTNSG-SLDLRSAAPGNILTIGGNYTGNNGTLLINT 940
Score = 37.4 bits (85), Expect = 3e-05
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query 453 GYGRLNLFKAGAGYGNFNGDVTLTMDASLGGFNQYDQWSND----------ISGAGKLTK 502
G G LN+ G + N T +L + S+D ++G G +
Sbjct 374 GNGYLNVHTGGHNFAFQNSTNTQEFTGTLALSDTLFDLSDDNTTALTSALVLAGVGSVIT 433
Query 503 LGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQ----GDIYVRGNSSLNINANKTVNI 558
GTGT +NG SF GG + GA++ + Q ++Y+ GN ++ ++ VN
Sbjct 434 AGTGTQVING-FSFDGGA-VNFGAVTQGAQQTESQIQVTDNLYINGNGAVRVSTPTDVN- 490
Query 559 GTNLTQLANSTLAI 572
+ Q+ NS+L++
Sbjct 491 --GIPQVINSSLSL 502
Score = 35.4 bits (80), Expect = 1e-04
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (7%)
Query 462 AGAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGID 521
+G G GN + TL++ + G SN++SG+G ++ + + T ++GNNS G+
Sbjct 746 SGLGTGNISNAGTLSLTHASGLL------SNNLSGSGTVSLINSDT-QISGNNSNYSGLF 798
Query 522 ITQGAISLLTKNAAGQGDIYVRGNSSLNINANKTVNIGTNLTQLAN 567
+ + L A G V L +N + N+T N
Sbjct 799 VVDTSSQLTATGAQNLGIASVSNRGILQLNNTTDWQLINNVTGTGN 844
Score = 30.8 bits (68), Expect = 0.003
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query 492 NDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNIN 551
ND+SG G GN S G + +T A LL+ N +G G + + NS I+
Sbjct 743 NDVSGLG------------TGNISNAGTLSLTH-ASGLLSNNLSGSGTVSLI-NSDTQIS 788
Query 552 ANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLNGILKVTTTNN 601
N + G + ++ A T AQ L +A+++N GIL++ T +
Sbjct 789 GNNSNYSGLFVVDTSSQLTA----TGAQ-NLGIASVSN-RGILQLNNTTD 832
Score = 26.9 bits (58), Expect = 0.051
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 18/108 (17%)
Query 504 GTGTLGLNGNNSFTGGIDITQ--------GAISLLTKNAAGQGDIYVRGNSSLNINANKT 555
G G++ ++G+NS D ++ G ISL ++Y+ GN +N +
Sbjct 158 GDGSIVIDGSNSKMTA-DFSEAYVGLYGNGDISLKNGGQLSASNLYIGGNGRAIVNIS-- 214
Query 556 VNIGTNLTQLANSTLAIHFKTAAQPALRVAN--IANLNGILKVTTTNN 601
GT+ +AN + I + A P + +A+ I N++ + +TT N+
Sbjct 215 ---GTDSRLIAN-MITISGSSGA-PGIYIADQGILNVDNYINITTAND 257
Score = 25.0 bits (53), Expect = 0.20
Identities = 33/143 (23%), Positives = 58/143 (41%), Gaps = 25/143 (17%)
Query 470 NGDVTLTMDASLGGFNQYDQWSNDISGAGKL---TKLGTGTLGLNGNNSFTGGIDITQGA 526
+G L +DA+ N D S I+GAG L ++ G N +N +TG I G
Sbjct 586 SGVDALVLDAAGTTGNAADM-SARITGAGDLAFNSQKGETVSLSNQDNDYTGVTAIRGGN 644
Query 527 ISLLTKNAAGQ-GDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVA 585
+ + + + GQ +I + ++ L++N H +T +
Sbjct 645 VLMNSNSVLGQTSEIRLATDTRLDMNG--------------------HSQTVGKLNGAAG 684
Query 586 NIANLNGILKVTTTNNLPTGTYT 608
++ N+NG T + + GT T
Sbjct 685 SVLNINGGNLTLTDDGVSAGTLT 707
Score = 25.0 bits (53), Expect = 0.20
Identities = 47/206 (23%), Positives = 74/206 (36%), Gaps = 41/206 (20%)
Query 438 STAIASGYPV-MDDAEGYGRLNLFKAG-------AGY--GNFNGDVTLTM---DASLGGF 484
ST IA V M+D G G N+ AG +G N +G T+++ D + G
Sbjct 731 STIIAKDATVRMNDVSGLGTGNISNAGTLSLTHASGLLSNNLSGSGTVSLINSDTQISGN 790
Query 485 NQYDQWSNDISGAGKLTKLGTGTLG-------------------LNGNNSFTGGIDITQG 525
N + + +LT G LG L N + TG + T
Sbjct 791 NSNYSGLFVVDTSSQLTATGAQNLGIASVSNRGILQLNNTTDWQLINNVTGTGNVRKTGS 850
Query 526 AISLLTKNAAGQGDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPALRVA 585
+ NAA G + S + ++ V + ++L +A + F V
Sbjct 851 GSLTVRSNAAWSGQTDIDDGSLILGQSDAPVMLASSLVNIAKNGKLTGFGGV------VG 904
Query 586 NIANLNGI-LKVTTTNNLPT--GTYT 608
N+ N + L+ N+ T G YT
Sbjct 905 NVTNSGSLDLRSAAPGNILTIGGNYT 930
>P32051 Uncharacterized lipoprotein YdeK [Escherichia coli (strain
K12)]
Length=1325
Score = 38.1 bits (87), Expect = 2e-05
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (2%)
Query 491 SNDISGAGKLTKLGTGTLGLNGNN-SFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLN 549
++ ISG+G +TKLGTG L LN ++ ++ G DI G I+ + +A ++ ++S
Sbjct 1244 THSISGSGDVTKLGTGILTLNNDSAAYQGTTDIVGGEIAFGSDSAINMASQHINIHNSGV 1303
Query 550 INANKT 555
++ N T
Sbjct 1304 MSGNVT 1309
Score = 34.7 bits (78), Expect = 2e-04
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 39/170 (23%)
Query 463 GAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNS-FTGGID 521
G G GN D LT+ G + N ISG G ++ + L+G+NS F G +
Sbjct 1154 GLGRGNIANDGLLTLKNVTG------ELRNSISGKGIVSATARTDVELDGDNSRFVGQFN 1207
Query 522 ITQG-AISL--------------------------LTKNAAGQGDIYVRGNSSLNINANK 554
I G A+S+ +T + +G GD+ G L +N +
Sbjct 1208 IDTGSALSVNEQKNLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILTLNNDS 1267
Query 555 TVNIGTNLTQLANSTLAIHFKTAAQPALRVANIANLNGIL--KVTTTNNL 602
GT T + +A +A A + NI N +G++ VTT ++
Sbjct 1268 AAYQGT--TDIVGGEIAFGSDSAINMASQHINIHN-SGVMSGNVTTAGDM 1314
Score = 27.3 bits (59), Expect = 0.039
Identities = 40/183 (22%), Positives = 70/183 (38%), Gaps = 17/183 (9%)
Query 453 GYGRLNLFKAGAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNG 512
GY RL G G N G+ ++ + L Y S +I+ G +T LG
Sbjct 161 GYLRLGSSTGGVGTVNVEGEDSV-LTTELFEIGSYGTGSLNITDKGYVTSSIVAILGYQA 219
Query 513 NNSFTGGIDITQGAISLLTKNAA---------GQGDIYVRGNSSLNINANKTVNIGTNLT 563
++ G + + +G L+ N + G G+ +R + A T+ IG N T
Sbjct 220 GSN--GQVVVEKGGEWLIKNNDSSIEFQIGNQGTGEATIREGGL--VTAENTI-IGGNAT 274
Query 564 QLANSTLAIHFKTAAQPALRVANIANLNGILKVTTTNNLPTGTYTLLSAKKLQGSYQKVT 623
+ TL + + + R+ N NG + ++ + Y+L+ + VT
Sbjct 275 GI--GTLNVQDQDSVITVRRLYNGYFGNGTVNISNNGLINNKEYSLVGVQDGSHGVVNVT 332
Query 624 LNG 626
G
Sbjct 333 DKG 335
Score = 27.3 bits (59), Expect = 0.039
Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 51/180 (28%)
Query 421 ETRFPYLTANQRRVVLKSTAIASGYPVMDDAEGYGRLNLFKAGA---------GYGNFN- 470
ET +T + V+ + GY +G+G +N+ G GYG
Sbjct 378 ETGTGNITVKDKNSVITNLGTNLGY------DGHGEMNISNQGLVVSNGGSSLGYGETGV 431
Query 471 GDVTLTMD---------------ASLGGFNQYDQW---SNDISGAG-KLTKLGT------ 505
G+V++T A +G N D S +I+ G K + +GT
Sbjct 432 GNVSITTGGMWEVNKNVYTTIGVAGVGNLNISDGGKFVSQNITFLGDKASGIGTLNLMDA 491
Query 506 ----GTLGLNGNNSFTGGIDITQGAI------SLLTKNAAGQGDIYVRGNSSLNINANKT 555
T+G+N N +G ++++ GA + NA+G+G + + +S N+ + T
Sbjct 492 TSSFDTVGINVGNFGSGIVNVSNGATLNSTGYGFIGGNASGKGIVNISTDSLWNLKTSST 551
Score = 26.2 bits (56), Expect = 0.088
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query 471 GDVTLT-MDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISL 529
GDV + ++ L FN Y SG G LT GTL + G + G + G +++
Sbjct 589 GDVRVDGQNSLLETFNMYV----GTSGTGTLTLTNNGTLNVEGGEVYLGVFEPAVGTLNI 644
Score = 25.8 bits (55), Expect = 0.11
Identities = 44/208 (21%), Positives = 67/208 (32%), Gaps = 52/208 (25%)
Query 449 DDAEGYGRLNLFKA-------GAGYGNFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLT 501
D A G G LNL A G GNF + + + Y + SG G +
Sbjct 478 DKASGIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNGATLNSTGYGFIGGNASGKGIVN 537
Query 502 -----------------KLGTGTLGLNGNNSFTGGI-----------DITQGAISLLTKN 533
L G LG N TGGI D ++G + + +N
Sbjct 538 ISTDSLWNLKTSSTNAQLLQVGVLGTGELNITTGGIVKARDTQIALNDKSKGDVRVDGQN 597
Query 534 A-----------AGQGDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQPAL 582
+ +G G + + N +LN+ + V +G + + AA A
Sbjct 598 SLLETFNMYVGTSGTGTLTLTNNGTLNVEGGE-VYLGVFEPAVGTLNIGAAHGEAAADAG 656
Query 583 RVANIANL-----NGILKVTTTNNLPTG 605
+ N + G+ TNN G
Sbjct 657 FITNATKVEFGLGEGVFVFNHTNNSDAG 684
Score = 25.0 bits (53), Expect = 0.20
Identities = 59/228 (26%), Positives = 89/228 (39%), Gaps = 53/228 (23%)
Query 453 GYGRLNLFKAGAGYGNFNGDVTLTMDASLGG-----FNQYDQWS-----NDISGA----- 497
G +L L + G YG T M A +GG N Q S ND GA
Sbjct 995 GGQKLTLAEHGGAYG-----ATADMSAKIGGEGDLAINTVRQVSLSNGQNDYQGATYVQM 1049
Query 498 GKLTKLGTGTLG--------------LNGNN----SFTGGIDIT----QGAISLLTKNAA 535
G L G LG LNG+ +FTG + T +GA+++ K
Sbjct 1050 GTLRTDADGALGNTRELNISNAAIVDLNGSTQTVETFTGQMGSTVLFKEGALTV-NKGGI 1108
Query 536 GQGDIYVRGNSSLNINANKTVNIGTNLTQLANSTLAIHFKTAAQ--PALRVANIANLNGI 593
QG++ G +LN+ G N A ++++ + + + L NIAN +G+
Sbjct 1109 SQGEL--TGGGNLNVTGGTLAIEGLNARYNALTSISPNAEVSLDNTQGLGRGNIAN-DGL 1165
Query 594 LKVTTTNNLPTGTYTLLSAKKLQGSYQK--VTLNGQDITPVYQNNTVT 639
L T N+ +S K + + + V L+G + V Q N T
Sbjct 1166 L---TLKNVTGELRNSISGKGIVSATARTDVELDGDNSRFVGQFNIDT 1210
Score = 24.6 bits (52), Expect = 0.26
Identities = 23/105 (22%), Positives = 42/105 (40%), Gaps = 3/105 (3%)
Query 468 NFNGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGL-NGNNSFTGGIDITQGA 526
N +G LT+ G + S I G G L + L NG N + G + G
Sbjct 992 NIHGGQKLTLAEHGGAYGATADMSAKIGGEGDLAINTVRQVSLSNGQNDYQGATYVQMGT 1051
Query 527 ISLLTKNAAGQ-GDIYVRGNSSLNINANKTVNIGTNLTQLANSTL 570
+ A G ++ + + +++N + T + T Q+ ++ L
Sbjct 1052 LRTDADGALGNTRELNISNAAIVDLNGS-TQTVETFTGQMGSTVL 1095
Score = 23.1 bits (48), Expect = 0.77
Identities = 19/92 (21%), Positives = 32/92 (35%), Gaps = 6/92 (7%)
Query 500 LTKLGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNINANKTVNIG 559
+ + GTG + + NS + G N + QG + G SSL N+
Sbjct 376 MKETGTGNITVKDKNSVITNLGTNLGYDGHGEMNISNQGLVVSNGGSSLGYGETGVGNVS 435
Query 560 TNLTQLANSTLAIHFKTAAQPALRVANIANLN 591
+ ++ + VA + NLN
Sbjct 436 ITTGGMWEVNKNVY------TTIGVAGVGNLN 461
Score = 22.7 bits (47), Expect = 1.0
Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 20/158 (13%)
Query 446 PVMDDAEGYGRLNLFKAGAGYGNFNG---DVTLTMDASLGGFNQYDQWSNDISGAGKLTK 502
P AEGY ++ GAG + G V T D + + W ND LT
Sbjct 857 PAATLAEGYISVDTLVVGAGDYTWKGRNYQVNGTGDVLI---DVPKPW-NDPMANNPLT- 911
Query 503 LGTGTLGLNGNNSFTGGIDITQGAISLLTKNAAGQGDIYVRGNSSLNINANKTVNIGTNL 562
TL L ++ G+ + + + G + +R + A+KT++I N
Sbjct 912 ----TLNLLEHDDSHVGVQLVKAQTVI-----GSGGSLTLRDLQGDEVEADKTLHIAQNG 962
Query 563 TQLANSTLAIHFKTAAQPALRV---ANIANLNGILKVT 597
T +A TA L V N++G K+T
Sbjct 963 TVVAEGDYGFRLTTAPGNGLYVNYGLKALNIHGGQKLT 1000
Score = 21.6 bits (44), Expect = 2.3
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query 470 NGDVTLTMDASLGGFNQYDQWSNDISGAGKLTKLGTGTLGLNGNNSFTGGIDITQGAISL 529
N D T++ G + YD +N + + + GTGTL + GG
Sbjct 114 NEDSEGTVNVLGGTWRLYDSGNN--ARPLNVGQSGTGTLNIKQKGHVDGG-------YLR 164
Query 530 LTKNAAGQGDIYVRGNSSL 548
L + G G + V G S+
Sbjct 165 LGSSTGGVGTVNVEGEDSV 183
Lambda K H a alpha
0.314 0.129 0.374 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6985485
Database: aa9ba6040689816832aeee3052fdd511.SwissProt.fasta
Posted date: May 20, 2024 1:11 AM
Number of letters in database: 12,531
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
