BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2d693bbdf9e57548b166610575fec3a7.SwissProt.fasta
12 sequences; 5,274 total letters
Query= ACIAD0992
Length=410
Score E
Sequences producing significant alignments: (Bits) Value
P42237 Probable galactarate/D-glucarate transporter GudP [Bacillu... 137 2e-39
Q46916 Probable galactarate/D-glucarate transporter GudP [Escheri... 132 1e-37
P0AA81 Probable galactarate/D-glucarate transporter GarP [Escheri... 130 6e-37
P0AA80 Probable galactarate/D-glucarate transporter GarP [Escheri... 130 6e-37
Q0K843 Probable sulfoacetate transporter SauU [Cupriavidus necato... 129 1e-36
P0AA77 D-galactonate transporter [Escherichia coli O6:H1 (strain ... 123 2e-34
P0AA76 D-galactonate transporter [Escherichia coli (strain K12)] 123 2e-34
P0DPR4 Quinolone resistance transporter [Acinetobacter baumannii ... 116 5e-32
O34456 Hexuronate transporter [Bacillus subtilis (strain 168)] 108 2e-29
P39398 Probable L-galactonate transporter [Escherichia coli (stra... 108 2e-29
Q44470 Putative tartrate transporter [Agrobacterium vitis] 99.0 5e-26
P70786 Putative tartrate transporter [Agrobacterium vitis] 98.6 8e-26
>P42237 Probable galactarate/D-glucarate transporter GudP [Bacillus
subtilis (strain 168)]
Length=455
Score = 137 bits (344), Expect = 2e-39
Identities = 110/436 (25%), Positives = 195/436 (45%), Gaps = 44/436 (10%)
Query 8 KKGFKHWIPAFVLMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGWLMTSFLLAY 67
KK W F+L + + D+ ++++ + Q +G+ D +G++ ++F AY
Sbjct 13 KKTSVRWFIVFMLFLVTSINYADRATLSI--TGDSVQHDLGL--DSVAMGYVFSAFGWAY 68
Query 68 GFSSIFLSFLGDIFNPKKMLFWSVTSWGILMLIMGFTTHYGS-----MLF-LRVLLGIAE 121
+ +L D F K ++ S+ W L+ G + + +LF LR L+G++E
Sbjct 69 VIGQLPGGWLLDRFGSKTIIALSIFFWSFFTLLQGAIGFFSAGTAIILLFALRFLVGLSE 128
Query 122 GPLFALAYAIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHDWHTTFFVMAA 181
P F +V + ++ AS F + P+ + WH+ F VM
Sbjct 129 APSFPGNGRVVASWFPSSERGTASAFFNSAQYFAIVIFSPLMGWLTHSFGWHSVFVVMG- 187
Query 182 LTLVVMIIIVLGLRNLQLRK------------------IIEIEDSSKRVNFKGHIANTKL 223
+ +++ V+ L+ + K +I ++DS + + K
Sbjct 188 --IAGILLAVIWLKTVYEPKKHPKVNEAELAYIEQGGGLISMDDSKSKQETESKWPYIKQ 245
Query 224 LLKNRAFWLVCLFNIALMTYLWGLNSWVPSYLIQDKGFNLKEFGFYSSLPFIAMLVGEVV 283
LL NR V + + T + +W P YL+Q +G ++ E GF +SLP + G V+
Sbjct 246 LLTNRMLIGVYIAQYCITTLTYFFLTWFPVYLVQARGMSILEAGFVASLPALCGFAGGVL 305
Query 284 GAVFSDKLGK--------RAIQVFSGLLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFG 335
G + SD L K R + + +G+L++ S+ V L++ MSL+ GFG
Sbjct 306 GGIVSDILLKKGRSLTFARKVPIIAGMLLS-CSMIVCNYTDSAWLVVVIMSLAFFGKGFG 364
Query 336 VAAVFALLARVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNLGITFL---A 392
A +A+++ + + +GG+FN N AS P++IG IV TGSFN + F+ A
Sbjct 365 -ALGWAVVSDTSPKECAGLSGGLFNTFGNIASITTPIIIGYIVNATGSFNGALVFVGANA 423
Query 393 VVAIVGSFFLTPLLKR 408
+ AI+ L +KR
Sbjct 424 IAAILSYLLLVGPIKR 439
>Q46916 Probable galactarate/D-glucarate transporter GudP [Escherichia
coli (strain K12)]
Length=450
Score = 132 bits (332), Expect = 1e-37
Identities = 103/428 (24%), Positives = 198/428 (46%), Gaps = 42/428 (10%)
Query 3 NDIDEKKGFKHWIPAFVLMACVVLAFF--DKISIAVLFSDPHFQDAMGIAEDKAKLGWLM 60
+ ++++ ++WI V+M +V +F D+ ++++ S+ A I D +G++
Sbjct 9 SSVEKRTNARYWI---VVMLFIVTSFNYGDRATLSIAGSEM----AKDIGLDPVGMGYVF 61
Query 61 TSFLLAYGFSSIFLSFLGDIFNPKKMLFWSVTSWGILMLIMGFTTHYG------SMLFLR 114
++F AY I +L D F K++ FWS+ W + L+ GF + ++ LR
Sbjct 62 SAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLR 121
Query 115 VLLGIAEGPLFALAYAIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHDWHT 174
L+G+AE P F IV + +++ A ++F + PI + + W
Sbjct 122 FLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWSH 181
Query 175 TFFVMAALTLVVMIIIVL---------GLRNLQLRKI--------IEIEDSSKRVNFKGH 217
FF M L +V+ I + G+ +L I ++ +++ +V F
Sbjct 182 VFFFMGGLGIVISFIWLKVIHEPNQHPGVNKKELEYIAAGGALINMDQQNTKVKVPFSVK 241
Query 218 IANTKLLLKNRAFWLVCLFNIALMTYLWGLNSWVPSYLIQDKGFNLKEFGFYSSLPFIAM 277
K LL +R V + + + +W P YL+Q +G ++ + GF +S+P +
Sbjct 242 WGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCG 301
Query 278 LVGEVVGAVFSDKLGKRA--------IQVFSGLLVAGISLYVMVLMTDPLLIIAAMSLSS 329
+G V+G + SD L +R + G+L++ + ++ + + +II M+L+
Sbjct 302 FIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVE-WMIIGFMALAF 360
Query 330 MAWGFGVAAVFALLARVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNLGIT 389
G G A +A++A ++ +GG+FN N + P+ IG IV TGSFN +
Sbjct 361 FGKGIG-ALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALI 419
Query 390 FLAVVAIV 397
++ V A++
Sbjct 420 YVGVHALI 427
>P0AA81 Probable galactarate/D-glucarate transporter GarP [Escherichia
coli O157:H7]
Length=444
Score = 130 bits (326), Expect = 6e-37
Identities = 109/445 (24%), Positives = 198/445 (44%), Gaps = 44/445 (10%)
Query 1 MLNDIDEKKGFKHWIPAFVLMACVVLA--FFDKISIAVLFSDPHFQDAMGIAEDKAKLGW 58
+L+ +DEKK H +L+ +V A + D+ ++++ ++ A + +G+
Sbjct 2 ILDTVDEKKKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEV----AKELQLSAVSMGY 57
Query 59 LMTSFLLAYGFSSIFLSFLGDIFNPKKMLFWSVTSWGILMLIMGFTTHYG------SMLF 112
+ ++F AY I +L D F KK+ +S+ W + + GF + SM F
Sbjct 58 IFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFF 117
Query 113 LRVLLGIAEGPLFALAYAIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHDW 172
+R +LG +E P F IV + +++ AS +F L P+ + W
Sbjct 118 MRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGW 177
Query 173 HTTFFVMAALTLVVMIIIVLGLRNLQLRKIIEIEDSSKRVNFKGHIANT----------- 221
F VM + V+ + + + N + E+ K ++ G + +
Sbjct 178 EHVFTVMGVIGFVLTALWIKLIHNPTDHPRMSAEEL-KFISENGAVVDMDHKKPGSAAAS 236
Query 222 -------KLLLKNRAFWLVCLFNIALMTYLWGLNSWVPSYLIQDKGFNLKEFGFYSSLPF 274
K LL NR V + T W +W P YL+Q+KG ++ + G +S+P
Sbjct 237 GPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPA 296
Query 275 IAMLVGEVVGAVFSDKLGKRAIQ--------VFSGLLVAGISLYVMVLMTDPLLIIAAMS 326
+ G V+G VFSD L KR + + G+L+A ++ + + L++ M+
Sbjct 297 LCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLAS-TIILCNYTNNTTLVVMLMA 355
Query 327 LSSMAWGFGVAAVFALLARVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNL 386
L+ GFG A + +++ ++ GG+FN N AS P++IG +V + SFN
Sbjct 356 LAFFGKGFG-ALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNA 414
Query 387 GITFL---AVVAIVGSFFLTPLLKR 408
+ F+ A++A+V F+ +KR
Sbjct 415 ALVFVGCSALMAMVCYLFVVGDIKR 439
>P0AA80 Probable galactarate/D-glucarate transporter GarP [Escherichia
coli (strain K12)]
Length=444
Score = 130 bits (326), Expect = 6e-37
Identities = 109/445 (24%), Positives = 198/445 (44%), Gaps = 44/445 (10%)
Query 1 MLNDIDEKKGFKHWIPAFVLMACVVLA--FFDKISIAVLFSDPHFQDAMGIAEDKAKLGW 58
+L+ +DEKK H +L+ +V A + D+ ++++ ++ A + +G+
Sbjct 2 ILDTVDEKKKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEV----AKELQLSAVSMGY 57
Query 59 LMTSFLLAYGFSSIFLSFLGDIFNPKKMLFWSVTSWGILMLIMGFTTHYG------SMLF 112
+ ++F AY I +L D F KK+ +S+ W + + GF + SM F
Sbjct 58 IFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFF 117
Query 113 LRVLLGIAEGPLFALAYAIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHDW 172
+R +LG +E P F IV + +++ AS +F L P+ + W
Sbjct 118 MRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGW 177
Query 173 HTTFFVMAALTLVVMIIIVLGLRNLQLRKIIEIEDSSKRVNFKGHIANT----------- 221
F VM + V+ + + + N + E+ K ++ G + +
Sbjct 178 EHVFTVMGVIGFVLTALWIKLIHNPTDHPRMSAEEL-KFISENGAVVDMDHKKPGSAAAS 236
Query 222 -------KLLLKNRAFWLVCLFNIALMTYLWGLNSWVPSYLIQDKGFNLKEFGFYSSLPF 274
K LL NR V + T W +W P YL+Q+KG ++ + G +S+P
Sbjct 237 GPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPA 296
Query 275 IAMLVGEVVGAVFSDKLGKRAIQ--------VFSGLLVAGISLYVMVLMTDPLLIIAAMS 326
+ G V+G VFSD L KR + + G+L+A ++ + + L++ M+
Sbjct 297 LCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLAS-TIILCNYTNNTTLVVMLMA 355
Query 327 LSSMAWGFGVAAVFALLARVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNL 386
L+ GFG A + +++ ++ GG+FN N AS P++IG +V + SFN
Sbjct 356 LAFFGKGFG-ALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNA 414
Query 387 GITFL---AVVAIVGSFFLTPLLKR 408
+ F+ A++A+V F+ +KR
Sbjct 415 ALVFVGCSALMAMVCYLFVVGDIKR 439
>Q0K843 Probable sulfoacetate transporter SauU [Cupriavidus necator
(strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442
/ H16 / Stanier 337)]
Length=430
Score = 129 bits (324), Expect = 1e-36
Identities = 100/405 (25%), Positives = 182/405 (45%), Gaps = 22/405 (5%)
Query 19 VLMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGWLMTSFLLAYGFSSIFLSFLG 78
V+ +A+ D+++I+V + P ++ MG+ ++LG + ++F Y I ++
Sbjct 14 VMCLMYFIAYIDRVNISV--AAPLIREEMGLTT--SQLGLVFSAFAYPYAAMQILGGWMA 69
Query 79 DIFNPKKMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFALAYAIVKQTYTD 138
D F PKK+L WG+ ++ GF ++ LR +LGI EG F A
Sbjct 70 DKFGPKKVLIVLSLIWGVATVLTGFAGSVLILVVLRFVLGIGEGGAFPTATRAFTYWMPV 129
Query 139 RQQARASTMFLLGTPIGAFLGFPITAAVLAKHDWHTTFFVMAALTLVVMIIIVLGLRNLQ 198
++ A + +G + P+ ++A W F V+ A++L ++ ++
Sbjct 130 AERGFAQGITHSFARLGGAITPPVVLVIVAAAGWREAFIVLGAVSLGWTLLYAFFFKDSP 189
Query 199 LRKIIEIEDSSKRVNFK------GHIANTKLLLKNRAFWLVCLFNIALMTYLWGLNSWVP 252
+ + + ++ A T R WLV + LW +W+P
Sbjct 190 DKHSRVTAQELQEIGYRHGDSRQAAKAATPWRRLFRRMWLVTFVDFCYGWSLWVYLTWLP 249
Query 253 SYLIQDKGFNLKEFGFYSSLPFIAMLVGEVVGAVFSDKLGK--------RAIQVFSGLLV 304
SYL + +GF+LK+ +++LP +A +VG+ +G V SD++ K R +F GL
Sbjct 250 SYLKEARGFDLKQLALFTALPLMAGVVGDTLGGVLSDRIYKRTGNLRLARGAVLFVGLAG 309
Query 305 AGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLARVTTADVGATAGGIFNGLAN 364
+ + + M D + + +SLS A +++L + G TAGG+ N
Sbjct 310 SLMFIAPMTFTADAVNAVILLSLSFFFLELTNAVLWSLPLDIAGKYAG-TAGGMMNTGFG 368
Query 365 FASAAAPVLIGMIVMQTGSFNLGITF---LAVVAIVGSFFLTPLL 406
A +PV+ G ++ +TGS++L L V + S F+ PLL
Sbjct 369 VAGMVSPVVFGYLIERTGSYDLPFMISGALLGVGALASLFINPLL 413
>P0AA77 D-galactonate transporter [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=430
Score = 123 bits (308), Expect = 2e-34
Identities = 94/415 (23%), Positives = 185/415 (45%), Gaps = 30/415 (7%)
Query 8 KKGFKHWIPAFVLMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGWLMTSFLLAY 67
K G + ++ ++ VV+ + D+ ++AV + H Q+ GI KA++G++ ++F Y
Sbjct 9 KPGRRRYLTLVMIFITVVICYVDRANLAV--ASAHIQEEFGIT--KAEMGYVFSAFAWLY 64
Query 68 GFSSIFLSFLGDIFNPKKMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFAL 127
I + D + F ++ W + L GF T S++ LR + GI E P F
Sbjct 65 TLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAPAFPT 124
Query 128 AYAIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHDWHTTFFVMAALTLVVM 187
+V + + ++A A + G +G P+ + WH F V + ++
Sbjct 125 NNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWS 184
Query 188 II---------IVLGLRNLQLRKI------IEIEDSSKRVNFKGHIANTKLLLKNRAFWL 232
+I + G+ +L I ++ + K+ + A L+ +R
Sbjct 185 LIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGDAPVKKEARQPLTAKDWKLVFHRKLIG 244
Query 233 VCLFNIALMTYLWGLNSWVPSYLIQDKGFNLKEFGFYSSLPFIAMLVGEVVGAVFSDKLG 292
V L A+ + LW +W P+YL Q+KG + GF +++PF+A VG ++ +D L
Sbjct 245 VYLGQFAVASTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFVGVLLSGWVADLLV 304
Query 293 K--------RAIQVFSGLLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLA 344
+ R + GLL++ + DP++I+ M+L+ GF + ++L++
Sbjct 305 RKGFSLGFARKTPIICGLLIS-TCIMGANYTNDPMMIMCLMALAFFGNGF-ASITWSLVS 362
Query 345 RVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVGS 399
+ + GG+FN P+++G + G F + +++ VA++G+
Sbjct 363 SLAPMRLIGLTGGVFNFAGGLGGITVPLVVGYLAQGYG-FAPALVYISAVALIGA 416
Score = 21.6 bits (44), Expect = 0.53
Identities = 41/182 (23%), Positives = 64/182 (35%), Gaps = 34/182 (19%)
Query 226 KNRAFWLVCLFNIALMTYLWGLNSWVPSYLIQDK-GFNLKEFGFYSSLPFIAMLVGEVVG 284
+ R LV +F ++ Y+ N V S IQ++ G E G+ S + ++ G
Sbjct 12 RRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGITKAEMGYVFSAFAWLYTLCQIPG 71
Query 285 AVFSDKLGKRAIQVFSGLLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLA 344
F D++G R + I S++++ GF + +
Sbjct 72 GWFLDRVGSRVTY---------------------FIAIFGWSVATLFQGFATGLMSLIGL 110
Query 345 RVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVGSFFLTP 404
R T GIF A F + V + S + F VG FLTP
Sbjct 111 RAIT--------GIFEAPA-FPTNNRMVTSWFPEHERAS---AVGFYTSGQFVGLAFLTP 158
Query 405 LL 406
LL
Sbjct 159 LL 160
>P0AA76 D-galactonate transporter [Escherichia coli (strain K12)]
Length=430
Score = 123 bits (308), Expect = 2e-34
Identities = 94/415 (23%), Positives = 185/415 (45%), Gaps = 30/415 (7%)
Query 8 KKGFKHWIPAFVLMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGWLMTSFLLAY 67
K G + ++ ++ VV+ + D+ ++AV + H Q+ GI KA++G++ ++F Y
Sbjct 9 KPGRRRYLTLVMIFITVVICYVDRANLAV--ASAHIQEEFGIT--KAEMGYVFSAFAWLY 64
Query 68 GFSSIFLSFLGDIFNPKKMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFAL 127
I + D + F ++ W + L GF T S++ LR + GI E P F
Sbjct 65 TLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAPAFPT 124
Query 128 AYAIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHDWHTTFFVMAALTLVVM 187
+V + + ++A A + G +G P+ + WH F V + ++
Sbjct 125 NNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIGIIWS 184
Query 188 II---------IVLGLRNLQLRKI------IEIEDSSKRVNFKGHIANTKLLLKNRAFWL 232
+I + G+ +L I ++ + K+ + A L+ +R
Sbjct 185 LIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGDAPVKKEARQPLTAKDWKLVFHRKLIG 244
Query 233 VCLFNIALMTYLWGLNSWVPSYLIQDKGFNLKEFGFYSSLPFIAMLVGEVVGAVFSDKLG 292
V L A+ + LW +W P+YL Q+KG + GF +++PF+A VG ++ +D L
Sbjct 245 VYLGQFAVASTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFVGVLLSGWVADLLV 304
Query 293 K--------RAIQVFSGLLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLA 344
+ R + GLL++ + DP++I+ M+L+ GF + ++L++
Sbjct 305 RKGFSLGFARKTPIICGLLIS-TCIMGANYTNDPMMIMCLMALAFFGNGF-ASITWSLVS 362
Query 345 RVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVGS 399
+ + GG+FN P+++G + G F + +++ VA++G+
Sbjct 363 SLAPMRLIGLTGGVFNFAGGLGGITVPLVVGYLAQGYG-FAPALVYISAVALIGA 416
Score = 21.6 bits (44), Expect = 0.53
Identities = 41/182 (23%), Positives = 64/182 (35%), Gaps = 34/182 (19%)
Query 226 KNRAFWLVCLFNIALMTYLWGLNSWVPSYLIQDK-GFNLKEFGFYSSLPFIAMLVGEVVG 284
+ R LV +F ++ Y+ N V S IQ++ G E G+ S + ++ G
Sbjct 12 RRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGITKAEMGYVFSAFAWLYTLCQIPG 71
Query 285 AVFSDKLGKRAIQVFSGLLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLA 344
F D++G R + I S++++ GF + +
Sbjct 72 GWFLDRVGSRVTY---------------------FIAIFGWSVATLFQGFATGLMSLIGL 110
Query 345 RVTTADVGATAGGIFNGLANFASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVGSFFLTP 404
R T GIF A F + V + S + F VG FLTP
Sbjct 111 RAIT--------GIFEAPA-FPTNNRMVTSWFPEHERAS---AVGFYTSGQFVGLAFLTP 158
Query 405 LL 406
LL
Sbjct 159 LL 160
>P0DPR4 Quinolone resistance transporter [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 /
5377)]
Length=434
Score = 116 bits (290), Expect = 5e-32
Identities = 94/400 (24%), Positives = 175/400 (44%), Gaps = 22/400 (6%)
Query 15 IPAFVLMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGWLMTSFLLAYGFSSIFL 74
IPA V++ V A+ D+ ++ F+ H +GI + LG + F + Y +
Sbjct 16 IPALVILYLV--AYIDRAAVG--FAHLHMGADVGIGDAAYGLGAGL--FFIGYFLFEVPS 69
Query 75 SFLGDIFNPKKMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFALAYAIVKQ 134
+ L D F +K + +WG++ + M S LR LLG+AE F ++ Q
Sbjct 70 NLLLDKFGARKWFTRILLTWGLITMAMALIQGPKSFYLLRFLLGVAEAGFFPGVLYLITQ 129
Query 135 TYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAK------HDWHTTFFVMAALTLVVMI 188
Y R + + MF+L PI + P+ +L H W F + +++ +
Sbjct 130 WYPVRHRGKIMGMFVLSQPIAMMIAGPLAGLLLGMDGIANLHGWQWLFVAVGLPAVLLAL 189
Query 189 IIVLGL-RNLQLRKIIEIEDSSKRVN---------FKGHIANTKLLLKNRAFWLVCLFNI 238
L L N+ K + IE N + AN LK++ L+ L+ +
Sbjct 190 PTFLWLPDNIDKVKWLSIEQKQWLKNELVKDEAEYDQTRHANPLHALKDKRVLLLALYYL 249
Query 239 ALMTYLWGLNSWVPSYLIQDKGFNLKEFGFYSSLPFIAMLVGEVVGAVFSDKLGKRAIQV 298
+ ++GLN W+P+ + Q G + + GF SS+P+I ++G ++ +D+L R +
Sbjct 250 PVTLSIYGLNLWLPTIIKQFGGGSDIQIGFLSSIPYIFGIIGLLIIPRSTDRLNDRYGHL 309
Query 299 FSGLLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLARVTTADVGATAGGI 358
+ ++++ + P++ +AA+++ + A + L R T A +
Sbjct 310 SFLYALGACAMFLSGWLNSPVMQLAALAVVAFCLFSSTAVFWTLPGRFLTGASAAAGIAL 369
Query 359 FNGLANFASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVG 398
N + N P IG++ TG+ G+ FL++V + G
Sbjct 370 INSVGNLGGYVGPFGIGLLKEYTGNMAAGLYFLSIVMLFG 409
>O34456 Hexuronate transporter [Bacillus subtilis (strain 168)]
Length=422
Score = 108 bits (271), Expect = 2e-29
Identities = 86/398 (22%), Positives = 171/398 (43%), Gaps = 23/398 (6%)
Query 25 VLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGWLMTSFLLAYGFSSIFLSFLGDIFNPK 84
V+ + D+ ++++ + P QD + ++ ++G + +SF + Y + D + K
Sbjct 18 VINYLDRSALSI--AAPFIQDDLTLSA--TQMGLIFSSFSIGYAIFNFLGGVASDRYGAK 73
Query 85 KMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFALAYAIVKQTYTDRQQARA 144
LF ++ W + + + S+L +R+L G+ EGPL A +V + Q+A
Sbjct 74 LTLFVAMVVWSLFSGAVALAFGFVSLLIIRILFGMGEGPLSATINKMVNNWFPPTQRASV 133
Query 145 STMFLLGTPIGAFLGFPITAAVLAKHDWHTTFFVMAALTLVVMIIIVLGLRNLQLRKIIE 204
+ GTP+G + PI + W +F ++ + L+ ++ ++ + ++ I+
Sbjct 134 IGVTNSGTPLGGAISGPIVGMIAVAFSWKVSFVLIMIIGLIWAVLWFKFVKE-KPQETIK 192
Query 205 IEDSSKRVNFKGHIANTKLLLKNRAFWLVCLFNIALMTYLWGLNSWVPSYLIQDKGFNLK 264
+ K G LK + A L+ +W PSYL+ ++G +++
Sbjct 193 EAPAIKAETSPGEKIPLTFYLKQKTVLFTAFAFFAYNYILFFFLTWFPSYLVDERGLSVE 252
Query 265 EFGFYSSLPFIAMLVGEVVGAVFSDKLGKRAIQVFSGLLVAGISLYVMVLMTDPLLI--- 321
+ +P+I +G G SD + K+ + G+L + + V L + +LI
Sbjct 253 SMSVITVIPWILGFIGLAAGGFVSDYVYKKTAR--KGVLFSRKVVLVTCLFSSAVLIGFA 310
Query 322 ---------IAAMSLSSMAWGFGVAAVFALLARVTTADVGATAGGIFNGLANFASAAAPV 372
+ ++LS A +A++ V + + GG + LAN A P
Sbjct 311 GLVATTAGAVTLVALSVFFLYLTGAIYWAVIQDVVDQNNVGSVGGFMHFLANTAGIIGPA 370
Query 373 LIGMIVMQTGSFNLGITFLAVVAIVGSF----FLTPLL 406
L G IV QTG+F+ +A+ S F+ P++
Sbjct 371 LTGFIVDQTGTFSGAFLLAGGLAVFASLAVIRFVRPII 408
>P39398 Probable L-galactonate transporter [Escherichia coli (strain
K12)]
Length=453
Score = 108 bits (271), Expect = 2e-29
Identities = 84/395 (21%), Positives = 172/395 (44%), Gaps = 18/395 (5%)
Query 19 VLMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGWLMTSFLLAYGFSSIFLSFLG 78
+L V+ + D+ S++V ++ ++ +G++ ++G L++ F LAYG + + L
Sbjct 46 LLFFAAVINYLDRSSLSV--ANLTIREELGLSA--TEIGALLSVFSLAYGIAQLPCGPLL 101
Query 79 DIFNPKKMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFALAYAIVKQTYTD 138
D P+ ML + W + + G ++ + +R+ +GI E P+ ++ +
Sbjct 102 DRKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNI 161
Query 139 RQQARASTMFLLGTPIGAFLGFPITAAVLAKHDWHTTFFVMAALTLVVMIIIVLGLRNLQ 198
+++ R F + IG + PI AA++ W F + L + + I + RN +
Sbjct 162 KERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNRE 221
Query 199 LRKIIEIED---SSKRVNFKG---HIANTKLLLKNRAFWLVCLFNIALMTYLWGLNSWVP 252
++ +E ++ VN + A + L +NR W + L + W +W+P
Sbjct 222 HVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLP 281
Query 253 SYLIQDKGFNLKEFGFYSSLPFIAMLVGEVVGAVFSDKLGK--------RAIQVFSGLLV 304
YL +LK G +++PF+ G +V +D L K R I + +G+
Sbjct 282 GYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIIAGMFC 341
Query 305 AGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLARVTTADVGATAGGIFNGLAN 364
+ ++ T + + + ++ F + + L+ + + A+ G I N +
Sbjct 342 SAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASF 401
Query 365 FASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVGS 399
++ AP++ G IV T SF L + V G+
Sbjct 402 ICASFAPIITGFIVDTTHSFRLALIICGCVTAAGA 436
>Q44470 Putative tartrate transporter [Agrobacterium vitis]
Length=433
Score = 99.0 bits (245), Expect = 5e-26
Identities = 94/410 (23%), Positives = 180/410 (44%), Gaps = 33/410 (8%)
Query 20 LMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGW--LMTSFLLAYGFSSIFLSFL 77
+M +AF D+++I F+ + +G + +G + L S++ L+ +
Sbjct 21 IMLLYFVAFLDRVNIG--FAALTMNEDLGFSSTVFGIGAGIFFVGYFLFEVPSNLILNKV 78
Query 78 GD-IFNPKKMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFALAYAIVKQTY 136
G I+ + M+ W + S G++ + G T+ Y LR LLG+AE F + +
Sbjct 79 GARIWIARVMITWGIVS-GLMAFVQGTTSFYA----LRFLLGVAEAGFFPGIILYLSFWF 133
Query 137 TDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHD------WHTTFFVMAALTLVVMIII 190
R++A + +F+ P+ LG PI+ A++ H W F + AA +++ +++
Sbjct 134 PARRRAAVTAIFMAAAPLSTVLGSPISGALMEMHGFLGLAGWQWMFLIEAAPAVILGVVV 193
Query 191 VLGLRNLQLRKIIEIEDSSKRVNFKGHIANTKLLLKNRAFWLVC-------LFNIALMTY 243
+ L + + ED N+ N + K +A + + +AL+ +
Sbjct 194 LFYLTDRPEKAKWLSEDER---NWLVKTMNAEQAAKGKASHSILAGLADIRVIALALVYF 250
Query 244 -----LWGLNSWVPSYLIQDKGFNLKEFGFYSSLPFIAMLVGEVVGAVFSDKLGKRAIQV 298
L+ L W P +I++ G + + GF +++P I + V+ A SDK G+R V
Sbjct 251 GTSAGLYTLGIWAPQ-IIKEFGLSSLQVGFINAVPGIFAVAAMVLWARHSDKTGERTWHV 309
Query 299 FSGLLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLARVTTADVGATAGGI 358
L+A + L T ++ A++L ++ ++++ + A
Sbjct 310 VGACLLAAVGLAFATGATSVFTVLIALTLVNIGISCSKPPLWSMPTLFLSGPAAAAGIAT 369
Query 359 FNGLANFASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVGSFFLTPLLKR 408
N + N P +IG I TGSF G+ F+A + +V S +T +L R
Sbjct 370 INSIGNLGGFVGPSMIGWIKDTTGSFAGGLYFVAGLLVV-SAIVTLVLSR 418
>P70786 Putative tartrate transporter [Agrobacterium vitis]
Length=449
Score = 98.6 bits (244), Expect = 8e-26
Identities = 94/407 (23%), Positives = 180/407 (44%), Gaps = 27/407 (7%)
Query 20 LMACVVLAFFDKISIAVLFSDPHFQDAMGIAEDKAKLGW--LMTSFLLAYGFSSIFLSFL 77
+M +AF D+++I F+ +G + +G + L S++ L+ +
Sbjct 38 IMLLYFIAFLDRVNIG--FAALTMNQDLGFSSTVFGIGAGIFFVGYFLFEVPSNLILNKV 95
Query 78 GD-IFNPKKMLFWSVTSWGILMLIMGFTTHYGSMLFLRVLLGIAEGPLFALAYAIVKQTY 136
G I+ + M+ W + S G++ + G T+ Y LR LLG+AE F + +
Sbjct 96 GARIWIARVMITWGIVS-GLMAFVQGTTSFY----ILRFLLGVAEAGFFPGIILYLSFWF 150
Query 137 TDRQQARASTMFLLGTPIGAFLGFPITAAVLAKHD------WHTTFFVMAALTLVVMIII 190
R++A + +F+ P+ LG PI+ A++ H W F + AA L++ +++
Sbjct 151 PARRRAAVTALFMAAAPLSTVLGSPISGALMEMHGLMGLAGWQWMFLIEAAPALILGVVV 210
Query 191 VLGLRNL-QLRKIIEIEDSS---KRVNFKGHIANTKLLLKNRAFWLVCLFNIALMTY--- 243
+ L + + K + E+ + K +N + T + + +AL+ +
Sbjct 211 LFFLTDRPEKAKWLTEEERNWLVKTMNAEQAGRGTASHSVMAGLADIRVIALALVYFGTS 270
Query 244 --LWGLNSWVPSYLIQDKGFNLKEFGFYSSLPFIAMLVGEVVGAVFSDKLGKRAIQVFSG 301
L+ L W P +I+ G + E GF +++P I +V V+ A SD+ G+R V
Sbjct 271 AGLYTLGIWAPQ-IIKQFGLSAIEVGFINAVPGIFAVVAMVLWARHSDRTGERTWHVVGA 329
Query 302 LLVAGISLYVMVLMTDPLLIIAAMSLSSMAWGFGVAAVFALLARVTTADVGATAGGIFNG 361
L+A L T +++ A+++ ++ ++++ + A N
Sbjct 330 CLLAAAGLAFAAGATSVFMVLIALTIVNVGISCSKPPLWSMPTMFLSGPAAAAGIATINS 389
Query 362 LANFASAAAPVLIGMIVMQTGSFNLGITFLAVVAIVGSFFLTPLLKR 408
+ N P +IG I TGSF G+ F+A + ++ S LT +L R
Sbjct 390 IGNLGGFVGPSMIGWIKDTTGSFTGGLYFVAGLLLI-SAILTLILAR 435
Lambda K H a alpha
0.332 0.143 0.439 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1691646
Database: 2d693bbdf9e57548b166610575fec3a7.SwissProt.fasta
Posted date: Jun 2, 2024 4:10 AM
Number of letters in database: 5,274
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
