BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e0df61ac1e7960db8c63faae2a913e22.SwissProt.fasta
15 sequences; 7,394 total letters
Query= ACIAD1059
Length=824
Score E
Sequences producing significant alignments: (Bits) Value
P77504 Uncharacterized ABC transporter permease YbbP [Escherichia... 347 2e-110
O53900 Uncharacterized ABC transporter permease protein Rv0987 [M... 82.0 4e-19
P9WG17 Uncharacterized ABC transporter permease Rv0072 [Mycobacte... 47.8 1e-08
P9WG16 Uncharacterized ABC transporter permease MT0078 [Mycobacte... 47.8 1e-08
Q4ZV10 Pyoverdine export ATP-binding/permease protein PvdT [Pseud... 42.7 5e-07
P9WG15 Uncharacterized ABC transporter permease Rv2563 [Mycobacte... 40.4 2e-06
P65008 Uncharacterized ABC transporter permease Mb2592 [Mycobacte... 40.4 2e-06
P9WG14 Uncharacterized ABC transporter permease MT2639 [Mycobacte... 40.4 2e-06
Q48KB2 Pyoverdine export ATP-binding/permease protein PvdT [Pseud... 40.4 3e-06
Q1I7I9 Pyoverdine export ATP-binding/permease protein PvdT [Pseud... 39.7 5e-06
Q87EF5 Lipoprotein-releasing system transmembrane protein LolC [X... 38.1 1e-05
Q9PEF2 Lipoprotein-releasing system transmembrane protein LolC [X... 38.1 1e-05
P0ADC4 Lipoprotein-releasing system transmembrane protein LolC [E... 34.3 2e-04
P0ADC5 Lipoprotein-releasing system transmembrane protein LolC [E... 34.3 2e-04
P0ADC3 Lipoprotein-releasing system transmembrane protein LolC [E... 34.3 2e-04
>P77504 Uncharacterized ABC transporter permease YbbP [Escherichia
coli (strain K12)]
Length=804
Score = 347 bits (890), Expect = 2e-110
Identities = 245/805 (30%), Positives = 409/805 (51%), Gaps = 42/805 (5%)
Query 11 QSFRTGGLYLLIIALSLAISATTALKFSNDQVKQAVSLQAAEMLAADLVLSDQEPIAQQW 70
+ +R+ L ++ +ALSLA++ AL +D++++ +S Q+ E +A D L + Q W
Sbjct 8 REWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSSREVPQAW 67
Query 71 TAQAQQDGLQQSKVTLFSSMARTDQNFVMVNVKAIDHKFPLRGDLKIDPVQQTLRRGEVW 130
+AQ+ GL+ K F++M + NVKA+D +P+ GDL+ +P + G V
Sbjct 68 LEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLKPQAGSVL 127
Query 131 LSPRARDLLKVKLNDLVFIADGQFKFTGLIQHDSNQELGFSGF--SPTVMINQQDVAKTN 188
L+PR LL +K D + + D + G + + + GF+ F +P +M+N DV KT
Sbjct 128 LAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDS--GFNPFQMAPRLMMNLADVDKTG 185
Query 189 AIQTGSRIEYRLLMAGNPEQTKTFSQQFKHLQQPNSDNESSENQATLRLRDATQNNARLM 248
A+Q GSR+ +R GN Q + + +P R Q+ L
Sbjct 186 AVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQ-----------RWYGLEQDEGALG 234
Query 249 KPIENLDTFLQLANILTILLCGIAIALTSQRYVQQNQDHIALIRCLGASKWQILRAYIGL 308
+ +E FL L+ +LT+LL A+A+ Y + D +A+++ LGA + Q+ + +G
Sbjct 235 RSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQ 294
Query 309 LSIVSLISIGTGTLIGIGLGYGLLQ--LMLQLMPQLNIGFSAMHLIAGPLPIAIFTSVVV 366
+V +S TG IG+ L + LM+ L P L L + T + +
Sbjct 295 WLMVLTLSAVTGGAIGL-----LFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISL 349
Query 367 LFGFILPSVWELLNTPPIRVIRQEIRSKRSLSLTFLAGISSLIIFSLI--LSENIPLSGM 424
L G L LL T P+RV+R ++ + L F I S+++ L+ L L
Sbjct 350 LVG--LRPYRLLLATQPLRVLRNDVVA-NVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWA 406
Query 425 MLAAILLLSLLLYGIVWSLLKFLK-------TLRNRLSAYVRLPHQTALQITALALGISL 477
+LA ++L+LL + W LL L+ LR +S +R P T Q++A +L L
Sbjct 407 VLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFML 466
Query 478 ITVLSVLRVDLLERWQQQLPEGTPNQFVYGLPPFEMPQLKQQLKQNEWKSTPLYPNIRGR 537
+ +L VLR DLL+RWQQQLP +PN F+ + ++ LK L +++ YP +R R
Sbjct 467 LALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAFLAEHQIVPESFYPVVRAR 526
Query 538 LIAKNDQPFTADQIKQNNALRRELNLTQAQSFPEDNQIITGITRFNQVNQVSVESKLAQE 597
L A ND+P + ++ AL RELNLT + P+ N I+ G + ++VS+E LA+
Sbjct 527 LTAINDKPTEGN---EDEALNRELNLTWQNTRPDHNPIVAG-NWPPKADEVSMEEGLAKR 582
Query 598 LGIKIGDQLTFQLPEGPLSARVVNLRTVEWESFSPNFFFIFSPSTMDENAGSYLGSFYVP 657
L + +GD +TF A+V +LR V+WES PNF+FIF +D S+L SF
Sbjct 583 LNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWE 642
Query 658 LQDKTKLIAVIQQFSNTVFIDVSLILDEVKRLVGVLVQIITILAVLVGVSGVLVLIACLN 717
L + +QF +D+ IL +V +++ + + + ++ VLV G+L+L+A +
Sbjct 643 -NGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQ 701
Query 718 LLMDERRREVALLRSFGISKRKLKNMLMFEVGLIGLLSGVVACLFAEVISAIASYKMNIA 777
+ M +R +E+ + R+ G K+ L+ L E ++G +SG+VA + AE A+ K+
Sbjct 702 VGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKV-FD 760
Query 778 IQWHIE--IWLILPVLMMLICAMIG 800
W + +W++LP L+ ++ G
Sbjct 761 FPWEPDWRLWIVLPCSGALLLSLFG 785
Score = 29.6 bits (65), Expect = 0.006
Identities = 29/131 (22%), Positives = 56/131 (43%), Gaps = 11/131 (8%)
Query 695 QIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKNMLMFEVGLIGLL 754
Q + + A+L + V + +N R VA+L++ G + +L+ +++ + ++ L
Sbjct 242 QFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLTL 301
Query 755 S----GVVACLFAEVISAIASYKMNIAIQ----WHIEIWLILPVLMMLICAMIGRYRLSY 806
S G + LF V+ + + A+ W WL M +I ++G
Sbjct 302 SAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWP---WLWALGTMTVISLLVGLRPYRL 358
Query 807 LCDIPPLQSLR 817
L PL+ LR
Sbjct 359 LLATQPLRVLR 369
>O53900 Uncharacterized ABC transporter permease protein Rv0987
[Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)]
Length=855
Score = 82.0 bits (201), Expect = 4e-19
Identities = 130/604 (22%), Positives = 249/604 (41%), Gaps = 77/604 (13%)
Query 255 DTFLQLANILTI---------LLCGIAIALTSQRY-VQQNQDHIALIRCLGASKWQILRA 304
DT Q+ + T+ LL GI + + + V Q + A++RCLG ++ Q+
Sbjct 248 DTVKQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVTREQLFWL 307
Query 305 YIGLLSIVSLISIGTGTLIGIGLGYGLLQLMLQLMPQL-------NIGFSAMHLIAGPLP 357
+ + LI G G LIGI LG GL+ L+ Q + N+ SA L+ G L
Sbjct 308 IMTESLVAGLIGTGLGLLIGIWLGEGLIGLVTQTINDFYFVINVRNVSVSAESLLKG-LI 366
Query 358 IAIFTSVVVLFGFILPSVWELLNTPPIRVIRQ-EIRSKRSLSLTFL----AGISSLIIFS 412
I IF +++ LP E + T P +R+ + SK + + +L G+ S +
Sbjct 367 IGIFAAMLA----TLPPAIEAMRTVPASTLRRSSLESKITKLMPWLWVAWFGLGSFGVLM 422
Query 413 LILSEN------IPLSGMMLAAILLLSLLLYGIVWSLLKFLKTLRNRLSA-----YVRLP 461
L L N + L +++A L+ L ++ L L L + VR
Sbjct 423 LWLPGNNLVVAFVGLFSVLIALALIAPPLTRFVMLRLAPGLGRLLGPIGRMAPRNIVRSL 482
Query 462 HQTALQITALALGISLITVLSVLRVDLLERWQQQLPEGTPNQFVYGLPP-FEMPQLKQQL 520
+T++ I AL + +SL+ +S+ V + E T VY PP + L
Sbjct 483 SRTSIAIAALMMAVSLMVGVSI-SVGSFRQTLANWLEVTLKSDVYVSPPTLTSGRPSGNL 541
Query 521 KQNEWKSTPLYPNIRGRLIAKNDQPFTADQIKQNNALRRELNLTQAQSFPE--DNQIITG 578
+ ++ +P +R ++A+ F D ++ + +++ + D T
Sbjct 542 PVDAVRNISKWPGVRDAVMARYSSVFAPDWGREVELMAVSGDISDGKRPYRWIDGNKDTL 601
Query 579 ITRFNQVNQVSVESKLAQELGIKIGDQ-LTFQLPEGPLSARVVNLRT------------- 624
RF V + + +++ + +T GP + V+ + +
Sbjct 602 WPRFLAGKGVMLSEPMVSRQHLQMPPRPITLMTDSGPQTFPVLAVFSDYTSDQGVILMDR 661
Query 625 ----VEWESFSPNFFFIFSPSTMDENAGSYLGSFYVPLQDKTKLIAVIQQFSNTVFIDVS 680
W+ F+F S N+G+ + + + VIQ S + S
Sbjct 662 ASYRAHWQDDDVTTMFLFLAS--GANSGALIDQLQAAFAGREDI--VIQ--STHSVREAS 715
Query 681 LILDEVKRLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKL 740
+ + + + + +Q++ + +G VL A ++L +D R E+ + R+ G++ R+L
Sbjct 716 MFIFDRSFTITIALQLVATVVAFIG-----VLSALMSLELD-RAHELGVFRAIGMTTRQL 769
Query 741 KNMLMFEVGLIGLLSGVVA----CLFAEVISAIASYK-MNIAIQWHIEIWLILPVLMMLI 795
++ E GL+G ++G++A C+ A ++ I + + +Q H E L L++ +
Sbjct 770 WKLMFIETGLMGGMAGLMALPTGCILAWILVRIINVRSFGWTLQMHFESAHFLRALLVAV 829
Query 796 CAMI 799
A +
Sbjct 830 VAAL 833
Score = 46.2 bits (108), Expect = 5e-08
Identities = 46/195 (24%), Positives = 91/195 (47%), Gaps = 9/195 (5%)
Query 573 NQIITGITRF-NQVNQVSVESKLAQELGIKIGDQLTFQLPEGPLSARVVNLRTVEWESFS 631
NQ I + F + N V + ++AQ+ G+ +GD++ Q+ P + +V L T E +
Sbjct 131 NQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQVKGAPTTVTLVGLLTPADEVSN 190
Query 632 PNF--FFIFSPSTMDE--NAGSYLGSFYVPLQDKTKLIAVIQQFSNTVFIDVS-LILDEV 686
I ST E + L + ++D+ + Q+ V ++ S D V
Sbjct 191 QKLSDLIIADISTAQELFHMPGRLSHIDLIIKDEATATRIQQRLPAGVRMETSDTQRDTV 250
Query 687 KRLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKNMLMF 746
K++ +T L+++ + G+ ++ + + +RR A+LR G+++ +L ++M
Sbjct 251 KQMTDAFTVNLTALSLIALLVGIFLIYNTVTFNVVQRRPFFAILRCLGVTREQLFWLIMT 310
Query 747 E---VGLIGLLSGVV 758
E GLIG G++
Sbjct 311 ESLVAGLIGTGLGLL 325
>P9WG17 Uncharacterized ABC transporter permease Rv0072 [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=349
Score = 47.8 bits (112), Expect = 1e-08
Identities = 35/133 (26%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query 683 LDEVKRLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKN 742
++++ R + V V I+I+AVL+ + VL++ + + L ER R+ A+ ++ G R +
Sbjct 217 VNDLVRPLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMA 276
Query 743 MLMFEVGLIGLLSGVVACLFAEVISAIASYKMNIAIQWHIEIWLILPVLMMLICAMIGRY 802
L + +I LL+ VV + A+V++ + + M +A+ + +L LPV ++I
Sbjct 277 GLALQALVIALLAAVVGVVLAQVLAPL--FPMIVAVP--VGAYLALPVAAIVIGLFASVA 332
Query 803 RLSYLCDIPPLQS 815
L + + P Q+
Sbjct 333 GLKRVVTVDPAQA 345
>P9WG16 Uncharacterized ABC transporter permease MT0078 [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=349
Score = 47.8 bits (112), Expect = 1e-08
Identities = 35/133 (26%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query 683 LDEVKRLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKN 742
++++ R + V V I+I+AVL+ + VL++ + + L ER R+ A+ ++ G R +
Sbjct 217 VNDLVRPLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMA 276
Query 743 MLMFEVGLIGLLSGVVACLFAEVISAIASYKMNIAIQWHIEIWLILPVLMMLICAMIGRY 802
L + +I LL+ VV + A+V++ + + M +A+ + +L LPV ++I
Sbjct 277 GLALQALVIALLAAVVGVVLAQVLAPL--FPMIVAVP--VGAYLALPVAAIVIGLFASVA 332
Query 803 RLSYLCDIPPLQS 815
L + + P Q+
Sbjct 333 GLKRVVTVDPAQA 345
>Q4ZV10 Pyoverdine export ATP-binding/permease protein PvdT [Pseudomonas
syringae pv. syringae (strain B728a)]
Length=657
Score = 42.7 bits (99), Expect = 5e-07
Identities = 41/179 (23%), Positives = 77/179 (43%), Gaps = 22/179 (12%)
Query 197 EYRLLMAGNPEQTKTFSQQFKHLQQP----NSDNESSENQATLRLRDATQNNARLMKPIE 252
EY + + K Q ++L Q D E + N A ++ TQN LM
Sbjct 480 EYITIATRDANNVKQAEQSIRNLLQQLHHGKQDYELTNNAAMIQAEARTQNTLSLM---- 535
Query 253 NLDTFLQLANILTILLCGIAIALTSQRYVQQNQDHIALIRCLGASKWQILRAYIGLLSIV 312
L +++L+ GI + V++ I + GA + ILR ++ ++
Sbjct 536 -----LGSIAAISLLVGGIGVMNIMLMTVRERTREIGIRMATGARQSDILRQFLTEAVML 590
Query 313 SLISIGTGTLIGIGLGYGLLQLMLQLMPQLNIGFSAMHLIAGPLPIAIFTSVVVLFGFI 371
S++ G ++ +G+G L L+ ++ + F+ + +AG A+ T V+ FGF+
Sbjct 591 SVVGGLAGIVLALGMGAAL------LLSKVAVAFT-LPAVAGAFACALITGVI--FGFM 640
Score = 25.4 bits (54), Expect = 0.11
Identities = 12/38 (32%), Positives = 26/38 (68%), Gaps = 3/38 (8%)
Query 697 ITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFG 734
+T+L +++GV+ V+V++A + +R+ +A + SFG
Sbjct 286 LTLLGIVIGVASVVVMLA---VGEGSKRQVMAQMSSFG 320
Score = 20.4 bits (41), Expect = 3.8
Identities = 7/21 (33%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 301 ILRAYIGLLSIVSLISIGTGT 321
+L IG+ S+V ++++G G+
Sbjct 288 LLGIVIGVASVVVMLAVGEGS 308
Score = 19.2 bits (38), Expect = 8.6
Identities = 13/31 (42%), Positives = 21/31 (68%), Gaps = 3/31 (10%)
Query 424 MMLAAILLLSLLLYGI-VWSLLKFLKTLRNR 453
+ML +I +SLL+ GI V +++ L T+R R
Sbjct 534 LMLGSIAAISLLVGGIGVMNIM--LMTVRER 562
>P9WG15 Uncharacterized ABC transporter permease Rv2563 [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=349
Score = 40.4 bits (93), Expect = 2e-06
Identities = 25/113 (22%), Positives = 61/113 (54%), Gaps = 4/113 (4%)
Query 683 LDEVKRLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKN 742
+ ++ R + V V IT++AVL+ + L++ + + L ER R+ A+ ++ G+ R +
Sbjct 217 VSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILA 276
Query 743 MLMFEVGLIGLLSGVVACLFAEVISAIASYKMNIAIQWHIEIWLILPVLMMLI 795
L + ++ LL+ VV + + +++ + + M + + + ++ LP + +I
Sbjct 277 GLALQAVVVALLAAVVGGILSLLLAPL--FPMTVVVP--LSAFVALPAIATVI 325
>P65008 Uncharacterized ABC transporter permease Mb2592 [Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97)]
Length=349
Score = 40.4 bits (93), Expect = 2e-06
Identities = 25/113 (22%), Positives = 61/113 (54%), Gaps = 4/113 (4%)
Query 683 LDEVKRLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKN 742
+ ++ R + V V IT++AVL+ + L++ + + L ER R+ A+ ++ G+ R +
Sbjct 217 VSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILA 276
Query 743 MLMFEVGLIGLLSGVVACLFAEVISAIASYKMNIAIQWHIEIWLILPVLMMLI 795
L + ++ LL+ VV + + +++ + + M + + + ++ LP + +I
Sbjct 277 GLALQAVVVALLAAVVGGILSLLLAPL--FPMTVVVP--LSAFVALPAIATVI 325
>P9WG14 Uncharacterized ABC transporter permease MT2639 [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=349
Score = 40.4 bits (93), Expect = 2e-06
Identities = 25/113 (22%), Positives = 61/113 (54%), Gaps = 4/113 (4%)
Query 683 LDEVKRLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKN 742
+ ++ R + V V IT++AVL+ + L++ + + L ER R+ A+ ++ G+ R +
Sbjct 217 VSDLMRPLKVAVDAITVVAVLLWIVAALIVGSVVYLSALERLRDFAVFKAIGVPTRSILA 276
Query 743 MLMFEVGLIGLLSGVVACLFAEVISAIASYKMNIAIQWHIEIWLILPVLMMLI 795
L + ++ LL+ VV + + +++ + + M + + + ++ LP + +I
Sbjct 277 GLALQAVVVALLAAVVGGILSLLLAPL--FPMTVVVP--LSAFVALPAIATVI 325
>Q48KB2 Pyoverdine export ATP-binding/permease protein PvdT [Pseudomonas
savastanoi pv. phaseolicola (strain 1448A / Race
6)]
Length=656
Score = 40.4 bits (93), Expect = 3e-06
Identities = 36/155 (23%), Positives = 69/155 (45%), Gaps = 18/155 (12%)
Query 217 KHLQQPNSDNESSENQATLRLRDATQNNARLMKPIENLDTFLQLANILTILLCGIAIALT 276
+ L D E + N A ++ TQN LM L +++L+ GI +
Sbjct 503 QRLHNGKQDYELTNNAAMIQAEARTQNTLSLM---------LGSIAAISLLVGGIGVMNI 553
Query 277 SQRYVQQNQDHIALIRCLGASKWQILRAYIGLLSIVSLISIGTGTLIGIGLGYGLLQLML 336
V++ I + GA + ILR ++ ++S++ G ++ +G+G L
Sbjct 554 MLMTVRERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGVVLALGMGAAL----- 608
Query 337 QLMPQLNIGFSAMHLIAGPLPIAIFTSVVVLFGFI 371
L+ ++ + F+ + +AG A+ T V+ FGF+
Sbjct 609 -LLSKVAVAFT-VPAVAGAFACALVTGVI--FGFM 639
Score = 25.4 bits (54), Expect = 0.11
Identities = 12/38 (32%), Positives = 26/38 (68%), Gaps = 3/38 (8%)
Query 697 ITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFG 734
+T+L +++GV+ V+V++A + +R+ +A + SFG
Sbjct 285 LTLLGIVIGVASVVVMLA---VGEGSKRQVMAQMSSFG 319
Score = 20.4 bits (41), Expect = 3.8
Identities = 7/21 (33%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 301 ILRAYIGLLSIVSLISIGTGT 321
+L IG+ S+V ++++G G+
Sbjct 287 LLGIVIGVASVVVMLAVGEGS 307
Score = 19.2 bits (38), Expect = 8.6
Identities = 13/31 (42%), Positives = 21/31 (68%), Gaps = 3/31 (10%)
Query 424 MMLAAILLLSLLLYGI-VWSLLKFLKTLRNR 453
+ML +I +SLL+ GI V +++ L T+R R
Sbjct 533 LMLGSIAAISLLVGGIGVMNIM--LMTVRER 561
>Q1I7I9 Pyoverdine export ATP-binding/permease protein PvdT [Pseudomonas
entomophila (strain L48)]
Length=654
Score = 39.7 bits (91), Expect = 5e-06
Identities = 39/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (11%)
Query 207 EQTKTFSQQFKHLQQPNSDNESSENQATLRLRDATQNNARLMKPIENLDTFLQLANILTI 266
E + + Q D + + + A ++ TQN+ LM L +++
Sbjct 491 ETEAAIDRLLRQRHQGKHDFDLTNDAALIQAEARTQNSLSLM---------LGAIAAISL 541
Query 267 LLCGIAIALTSQRYVQQNQDHIALIRCLGASKWQILRAYIGLLSIVSLISIGTGTLIGIG 326
L+ GI + V++ I + GA + ILR ++ ++S++ TG +I +
Sbjct 542 LVGGIGVMNIMLMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSMVGGVTGIVIALL 601
Query 327 LGYGLLQLMLQLMPQLNIGFSAMHLIAGPLPIAIFTSVVVLFGFI 371
+G GL L+ + + F A+ I G A+ T VV FGF+
Sbjct 602 VGGGL------LLADIAVAF-ALPAILGAFACAVITGVV--FGFM 637
Score = 32.0 bits (71), Expect = 0.001
Identities = 20/91 (22%), Positives = 47/91 (52%), Gaps = 5/91 (5%)
Query 678 DVSLILDEVK--RLVGVLVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGI 735
D +LI E + + +++ I +++LVG GV+ ++ + + ER RE+ + + G
Sbjct 515 DAALIQAEARTQNSLSLMLGAIAAISLLVGGIGVMNIML---MTVRERTREIGIRMATGA 571
Query 736 SKRKLKNMLMFEVGLIGLLSGVVACLFAEVI 766
+R + + E ++ ++ GV + A ++
Sbjct 572 RQRDILRQFLTEAVMLSMVGGVTGIVIALLV 602
Score = 24.6 bits (52), Expect = 0.19
Identities = 11/38 (29%), Positives = 26/38 (68%), Gaps = 3/38 (8%)
Query 697 ITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFG 734
+T+L +++GV+ V+V++A + +R+ +A + +FG
Sbjct 283 LTLLGIIIGVASVVVMLA---VGEGSKRQVMAQMAAFG 317
Score = 21.6 bits (44), Expect = 1.7
Identities = 23/70 (33%), Positives = 36/70 (51%), Gaps = 9/70 (13%)
Query 385 RVIRQEIRSKRSLSLTFLAGISSLIIFSLILSENIPLSGMMLAAILLLSLLLYGI-VWSL 443
R++RQ + K LT ++LI ++ L ML AI +SLL+ GI V ++
Sbjct 498 RLLRQRHQGKHDFDLT---NDAALIQAEARTQNSLSL---MLGAIAAISLLVGGIGVMNI 551
Query 444 LKFLKTLRNR 453
+ L T+R R
Sbjct 552 M--LMTVRER 559
Score = 20.4 bits (41), Expect = 3.8
Identities = 7/21 (33%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 301 ILRAYIGLLSIVSLISIGTGT 321
+L IG+ S+V ++++G G+
Sbjct 285 LLGIIIGVASVVVMLAVGEGS 305
>Q87EF5 Lipoprotein-releasing system transmembrane protein LolC
[Xylella fastidiosa (strain Temecula1 / ATCC 700964)]
Length=413
Score = 38.1 bits (87), Expect = 1e-05
Identities = 19/66 (29%), Positives = 40/66 (61%), Gaps = 3/66 (5%)
Query 696 IITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKNMLMFE---VGLIG 752
++ IL L+ G L++ +L+ +++ ++A+LR+ G+S + + M + +G+IG
Sbjct 270 VMGILLSLIIAMGAFNLVSSQVMLVTDKQADIAILRTLGLSPAGVMRVFMVQGSLIGIIG 329
Query 753 LLSGVV 758
LSGV+
Sbjct 330 TLSGVI 335
>Q9PEF2 Lipoprotein-releasing system transmembrane protein LolC
[Xylella fastidiosa (strain 9a5c)]
Length=413
Score = 38.1 bits (87), Expect = 1e-05
Identities = 19/66 (29%), Positives = 40/66 (61%), Gaps = 3/66 (5%)
Query 696 IITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKNMLMFE---VGLIG 752
++ IL L+ G L++ +L+ +++ ++A+LR+ G+S + + M + +G+IG
Sbjct 270 VMGILLSLIIAMGAFNLVSSQVMLVTDKQADIAILRTLGLSPAGVMRVFMVQGSLIGIIG 329
Query 753 LLSGVV 758
LSGV+
Sbjct 330 TLSGVI 335
>P0ADC4 Lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=399
Score = 34.3 bits (77), Expect = 2e-04
Identities = 42/203 (21%), Positives = 93/203 (46%), Gaps = 20/203 (10%)
Query 588 VSVESKLAQELGIKIGDQLTFQLPEG----PL----SARVVNL-----RTVEWESFSPNF 634
V + +LA +LG+ GDQ+ +P P+ S R+ N+ E + +
Sbjct 144 VILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLV 203
Query 635 FFIFSPSTMDENAGSYLGSFYVPLQDKTKLIAVIQQF--SNTVFIDVSLILDEVKRLVGV 692
+ M AG+ G + + L + K+ ++ QQ + + D E+ + V +
Sbjct 204 NIEDASRLMRYPAGNITG-WRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRM 262
Query 693 LVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKNMLMFEVGLIG 752
++ +L L+ +I L L++ E++ EVA+L++ G++ R++ + M + G
Sbjct 263 EKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQ----G 318
Query 753 LLSGVVACLFAEVISAIASYKMN 775
+G++ + + A+ + ++N
Sbjct 319 ASAGIIGAILGAALGALLASQLN 341
Score = 19.6 bits (39), Expect = 6.2
Identities = 10/17 (59%), Positives = 13/17 (76%), Gaps = 2/17 (12%)
Query 484 LRVDLLERWQQQLPEGT 500
L+VD L QQ+LPEG+
Sbjct 230 LKVDSLS--QQKLPEGS 244
>P0ADC5 Lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7]
Length=399
Score = 34.3 bits (77), Expect = 2e-04
Identities = 42/203 (21%), Positives = 93/203 (46%), Gaps = 20/203 (10%)
Query 588 VSVESKLAQELGIKIGDQLTFQLPEG----PL----SARVVNL-----RTVEWESFSPNF 634
V + +LA +LG+ GDQ+ +P P+ S R+ N+ E + +
Sbjct 144 VILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLV 203
Query 635 FFIFSPSTMDENAGSYLGSFYVPLQDKTKLIAVIQQF--SNTVFIDVSLILDEVKRLVGV 692
+ M AG+ G + + L + K+ ++ QQ + + D E+ + V +
Sbjct 204 NIEDASRLMRYPAGNITG-WRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRM 262
Query 693 LVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKNMLMFEVGLIG 752
++ +L L+ +I L L++ E++ EVA+L++ G++ R++ + M + G
Sbjct 263 EKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQ----G 318
Query 753 LLSGVVACLFAEVISAIASYKMN 775
+G++ + + A+ + ++N
Sbjct 319 ASAGIIGAILGAALGALLASQLN 341
Score = 19.6 bits (39), Expect = 6.2
Identities = 10/17 (59%), Positives = 13/17 (76%), Gaps = 2/17 (12%)
Query 484 LRVDLLERWQQQLPEGT 500
L+VD L QQ+LPEG+
Sbjct 230 LKVDSLS--QQKLPEGS 244
>P0ADC3 Lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli (strain K12)]
Length=399
Score = 34.3 bits (77), Expect = 2e-04
Identities = 42/203 (21%), Positives = 93/203 (46%), Gaps = 20/203 (10%)
Query 588 VSVESKLAQELGIKIGDQLTFQLPEG----PL----SARVVNL-----RTVEWESFSPNF 634
V + +LA +LG+ GDQ+ +P P+ S R+ N+ E + +
Sbjct 144 VILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLV 203
Query 635 FFIFSPSTMDENAGSYLGSFYVPLQDKTKLIAVIQQF--SNTVFIDVSLILDEVKRLVGV 692
+ M AG+ G + + L + K+ ++ QQ + + D E+ + V +
Sbjct 204 NIEDASRLMRYPAGNITG-WRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRM 262
Query 693 LVQIITILAVLVGVSGVLVLIACLNLLMDERRREVALLRSFGISKRKLKNMLMFEVGLIG 752
++ +L L+ +I L L++ E++ EVA+L++ G++ R++ + M + G
Sbjct 263 EKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQ----G 318
Query 753 LLSGVVACLFAEVISAIASYKMN 775
+G++ + + A+ + ++N
Sbjct 319 ASAGIIGAILGAALGALLASQLN 341
Score = 19.6 bits (39), Expect = 6.2
Identities = 10/17 (59%), Positives = 13/17 (76%), Gaps = 2/17 (12%)
Query 484 LRVDLLERWQQQLPEGT 500
L+VD L QQ+LPEG+
Sbjct 230 LKVDSLS--QQKLPEGS 244
Lambda K H a alpha
0.324 0.138 0.394 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5015413
Database: e0df61ac1e7960db8c63faae2a913e22.SwissProt.fasta
Posted date: May 9, 2024 4:06 PM
Number of letters in database: 7,394
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
