Comparative Genomics

ACIAD1094 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 3baa73c9ecc140d329c29f82b47df353.SwissProt.fasta
           20 sequences; 4,765 total letters



Query= ACIAD1094

Length=221
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q2Y9M5 Urease accessory protein UreF [Nitrosospira multiformis (s...  165     1e-54
Q1QV55 Urease accessory protein UreF [Chromohalobacter salexigens...  157     2e-51
Q1H0F4 Urease accessory protein UreF [Methylobacillus flagellatus...  154     3e-50
A6SZ09 Urease accessory protein UreF [Janthinobacterium sp. (stra...  149     2e-48
B2U7M9 Urease accessory protein UreF [Ralstonia pickettii (strain...  149     3e-48
A1KBB2 Urease accessory protein UreF [Azoarcus sp. (strain BH72)]     149     4e-48
Q47G57 Urease accessory protein UreF [Dechloromonas aromatica (st...  148     5e-48
Q8XXT3 Urease accessory protein UreF [Ralstonia nicotianae (strai...  146     4e-47
Q3J772 Urease accessory protein UreF [Nitrosococcus oceani (strai...  144     2e-46
Q21P92 Urease accessory protein UreF [Saccharophagus degradans (s...  141     3e-45
O06708 Urease accessory protein UreE / Urease accessory protein U...  144     1e-44
Q9FAS3 Urease accessory protein UreF [Vibrio parahaemolyticus]        125     5e-39
P17091 Urease accessory protein UreF [Proteus mirabilis (strain H...  121     2e-37
Q8X9U5 Urease accessory protein UreF [Escherichia coli O157:H7]       111     1e-33
P18318 Urease accessory protein UreF [Klebsiella aerogenes]           102     3e-30
O54423 Urease accessory protein UreF [Actinobacillus pleuropneumo...  79.3    2e-21
Q09065 Urease accessory protein UreF [Helicobacter pylori (strain...  78.2    7e-21
Q8RPX8 Urease accessory protein UreF [Rhizobium leguminosarum bv....  70.5    3e-18
Q55056 Urease accessory protein UreF [Streptococcus salivarius (s...  68.9    1e-17
Q79VJ2 Urease accessory protein UreF [Corynebacterium glutamicum ...  67.4    4e-17


>Q2Y9M5 Urease accessory protein UreF [Nitrosospira multiformis 
(strain ATCC 25196 / NCIMB 11849 / C 71)]
Length=226

 Score = 165 bits (418),  Expect = 1e-54
 Identities = 96/221 (43%), Positives = 140/221 (63%), Gaps = 9/221 (4%)

Query  8    LLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKR  67
            LL LL L+S +LP+GAY YSQG+ESAIE GL++DE S+  +  E+L  +   FELPIL+R
Sbjct  7    LLALLHLASPSLPIGAYTYSQGLESAIEQGLVRDETSAREWLVEMLG-IFTDFELPILQR  65

Query  68   LMQSYA--DEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDV------LKMPVEV  119
            L+++++  DE     W + + ASRE+ E  AE+ Q+ +SL   + D+      ++  +E 
Sbjct  66   LLKAFSERDEAAVSFWTECFVASRETSEFRAETVQMGYSLAKLVIDLKLGDDSMRAILEN  125

Query  120  KKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHE  179
            ++       +A  +  LG+   + L    FS+ ENQVLA VK+VPLGQ+SGQR+L  LH 
Sbjct  126  QQAIPLPTAFACAAEALGIPHEESLLGMLFSMAENQVLACVKSVPLGQLSGQRLLLSLHP  185

Query  180  KVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
             +     +A  L DDE+SS  P  ++LSMQHE QYSR++RS
Sbjct  186  VIEACSIRASQLTDDELSSWAPGLSLLSMQHEVQYSRIYRS  226


>Q1QV55 Urease accessory protein UreF [Chromohalobacter salexigens 
(strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 
/ 1H11)]
Length=230

 Score = 157 bits (396),  Expect = 2e-51
 Identities = 91/217 (42%), Positives = 138/217 (64%), Gaps = 4/217 (2%)

Query  8    LLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKR  67
            L  L+ L S ALP+GA+ +SQG+ESA+E G + DEAS   +   VL+  L R ELP+L R
Sbjct  14   LAGLMQLVSPALPIGAFAWSQGLESALELGWVDDEASLGEWLAGVLDDGLTRCELPVLAR  73

Query  68   LMQSYA--DEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMPVE--VKKQF  123
            + +++A  D +    W D  +A+RE++ELL E Q+L  +L   ++ + ++PV   + +  
Sbjct  74   VHRAWAEGDAQALAHWNDWLQANRETRELLEEEQRLGGTLVRLLRSLDQVPVTPAMPETP  133

Query  124  GFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHEKVPQ  183
            G+V V+A  +   G+S  D +  ++++ LENQ+  A K +PLGQ S QR++  L   +  
Sbjct  134  GYVVVFALAARVRGVSREDAMLGFAWAWLENQLTVACKALPLGQTSAQRLVERLRPALVA  193

Query  184  AVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            AV +ALAL+DD++  ALP  A+ S  HETQYSRLFRS
Sbjct  194  AVSEALALDDDDLGPALPGLALASALHETQYSRLFRS  230


>Q1H0F4 Urease accessory protein UreF [Methylobacillus flagellatus 
(strain KT / ATCC 51484 / DSM 6875)]
Length=227

 Score = 154 bits (389),  Expect = 3e-50
 Identities = 90/221 (41%), Positives = 133/221 (60%), Gaps = 8/221 (4%)

Query  8    LLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKR  67
            L++LL L+S  LPVGAY YSQG+E  IE+G + D  S+ A+  +VL++    FELP+L R
Sbjct  7    LVRLLQLASPMLPVGAYSYSQGLEWGIESGEVHDLESAQAWIGDVLQVYQGGFELPVLSR  66

Query  68   LMQSY--ADEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMP------VEV  119
              +++   D E    W   Y A R++ E LAES+Q+ +SL   + +  ++       +E 
Sbjct  67   CYRAWQRGDVEALNEWNAFYLAGRDNAEALAESRQMGYSLKRLLLEFEELSGAWATMLEA  126

Query  120  KKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHE  179
                 F  +YA +S    +   D L AY++S LENQ  AA+K VPLGQ++GQ+IL  +  
Sbjct  127  LPNASFPALYAGISQAWEIEEQDALQAYAWSWLENQASAAMKAVPLGQVAGQKILLGVAG  186

Query  180  KVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            K+P  VE A+ ++D E+S+  P   +   +HETQYSRLFRS
Sbjct  187  KIPVLVEAAIQMQDHEISNFCPALTIAGCRHETQYSRLFRS  227


>A6SZ09 Urease accessory protein UreF [Janthinobacterium sp. (strain 
Marseille)]
Length=226

 Score = 149 bits (377),  Expect = 2e-48
 Identities = 87/226 (38%), Positives = 134/226 (59%), Gaps = 8/226 (4%)

Query  3    INAAQLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFEL  62
            + A  LL LL LSS +LP+GAY YSQG+E+AIE G ++DE  +  +  +VL  ++ RFE 
Sbjct  1    MQAQALLHLLQLSSPSLPIGAYSYSQGLEAAIENGTVKDEVGARRWIIDVLHEVVARFEA  60

Query  63   PILKRLMQSYADEEQFLL--WADLYKASRESKELLAESQQLAFSLNAWIKDV------LK  114
            P+L RL+Q++   +   +  W + + A+R++ E  AE+ Q+ +SL     D+      + 
Sbjct  61   PVLWRLLQAFETRDAAAVESWTERFIAARDTAEFRAETIQMGYSLGKLCSDLQLGDAEML  120

Query  115  MPVEVKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRIL  174
              ++ + +       A  +  L + A   L    FS  ENQVL  VK+VPLGQ++GQR+L
Sbjct  121  ALLQAQTEVPLPTALAYAAVTLKVPAEAALLGMLFSWAENQVLVCVKSVPLGQVAGQRLL  180

Query  175  WHLHEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
              L  ++  A + A  L D+E+S+  P  ++LSMQHE QYSRL+RS
Sbjct  181  LSLQAELEVAAQVAQQLPDEELSNWSPGLSLLSMQHEVQYSRLYRS  226


>B2U7M9 Urease accessory protein UreF [Ralstonia pickettii (strain 
12J)]
Length=229

 Score = 149 bits (375),  Expect = 3e-48
 Identities = 97/228 (43%), Positives = 135/228 (59%), Gaps = 12/228 (5%)

Query  4    NAAQLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELP  63
            NAAQL  LL L+S ALPVGA+ YSQG+E+A++   + DEAS+ A+  E L++L    E P
Sbjct  3    NAAQLTALLHLASPALPVGAFSYSQGLEAAVDVRRVADEASAAAWIAEGLDVLAA-CEAP  61

Query  64   I-LKRLMQSYADEEQFLLWADL-YKASRESKELLAESQQLAFSLN------AWIKDVLKM  115
            + L +     A     +   D  + A+RE++EL  E+ Q+ +SLN      AW  D L+ 
Sbjct  62   LWLLQFADWQAGRFDAVAERDAWFLATRETRELRLETSQMGWSLNRLIQQMAWGDDALRS  121

Query  116  PVEVKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILW  175
             +       F   +A  +  L +   D +TAY F+ +ENQ+ AAVK VPLGQ +GQRIL+
Sbjct  122  ALAACASVTFPTAFAAAAAALNVDPRDGVTAYCFAWVENQMAAAVKAVPLGQAAGQRILF  181

Query  176  HLHEKVPQAVEQA---LALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
             LH  V +AVE+A    A    E+S+  P   +LS +HETQYSRLFRS
Sbjct  182  GLHAAVARAVEEATRRAACHPPELSTFSPGLGVLSARHETQYSRLFRS  229


>A1KBB2 Urease accessory protein UreF [Azoarcus sp. (strain BH72)]
Length=234

 Score = 149 bits (375),  Expect = 4e-48
 Identities = 96/234 (41%), Positives = 136/234 (58%), Gaps = 14/234 (6%)

Query  1    MSINAA----QLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEML  56
            MS N A     L++LL L+S ALPVGAY YSQG+E A+E G ++ EA +  +  +VLE  
Sbjct  1    MSTNPAGGLLPLIRLLQLASPALPVGAYTYSQGLEWAVECGTVRTEADARRWIGDVLEWS  60

Query  57   LVRFELPILKRLMQSYAD--EEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDV--  112
            L RFE P++ RL+ ++AD  + +     + + ASRE+ EL AE+ Q+ +SL   + D+  
Sbjct  61   LARFEAPLVARLLAAWADGDDAEVARLNEDFLASRETSELRAETVQMGYSLVRLLADLDA  120

Query  113  ------LKMPVEVKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLG  166
                   K  +       F   +   +    + A   L+AY ++ LENQV+AAVK VPLG
Sbjct  121  FAGLPGWKARLVALDTPAFPVAWTAAAAAWRIPADQALSAYLWAWLENQVMAAVKAVPLG  180

Query  167  QMSGQRILWHLHEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            Q +GQR+L  L   VP  VE A  L + E S+  P  A+ S +HETQY+RLFRS
Sbjct  181  QSAGQRLLADLGAAVPALVEAAQCLPEAEWSNFTPGLAIASSRHETQYTRLFRS  234


>Q47G57 Urease accessory protein UreF [Dechloromonas aromatica 
(strain RCB)]
Length=228

 Score = 148 bits (374),  Expect = 5e-48
 Identities = 87/223 (39%), Positives = 135/223 (61%), Gaps = 9/223 (4%)

Query  7    QLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILK  66
            QL +LL L+S  LPVGAY YSQG+E A+E+G+I+DEAS+  +  +++   +  +E P++ 
Sbjct  6    QLARLLQLASPTLPVGAYTYSQGLEWAVESGVIRDEASAGRWIADLMHHGIGCYEAPMVA  65

Query  67   RLMQSYA--DEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDV-------LKMPV  117
             LM +++  D ++       + ASRES EL AE+ Q+ FS+   ++D+       +   V
Sbjct  66   ALMTAWSAGDVDEIECLNAEFLASRESAELRAETVQMGFSMRRLLRDLRDDTLAAVATLV  125

Query  118  EVKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHL  177
            E + +  F  V++ ++    +     +TAY +S  ENQV+AA+K VPLGQ SGQR+L  L
Sbjct  126  ETQAEVAFPTVWSGIAAAWQIEPEAAVTAYLWSWAENQVMAALKAVPLGQASGQRLLAEL  185

Query  178  HEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
              ++P+A   A  L     S+  P +A+   +HETQYSRLFRS
Sbjct  186  GSRIPEAAANANTLPKSRWSNFTPAFAIACARHETQYSRLFRS  228


>Q8XXT3 Urease accessory protein UreF [Ralstonia nicotianae (strain 
GMI1000)]
Length=229

 Score = 146 bits (368),  Expect = 4e-47
 Identities = 98/231 (42%), Positives = 134/231 (58%), Gaps = 18/231 (8%)

Query  4    NAAQLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELP  63
            +AAQL  LL L+S ALPVGA+ YSQG+E+A+E   + DEAS+  +  E L +L    E P
Sbjct  3    SAAQLTALLHLASPALPVGAFSYSQGLEAAVEARHVHDEASAARWIAEGLAVLAA-CEAP  61

Query  64   ILKRLMQSYADEEQFLLWA-----DLYKASRESKELLAESQQLAFSLN------AWIKDV  112
            +    +  YAD +   L A       + A+RE++EL  E+ Q+ +SL        W    
Sbjct  62   LW---LLQYADWQAGRLDAVAERDGWFLATRETRELRLETAQMGWSLARLIAQMGWGAPA  118

Query  113  LKMPVEVKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQR  172
            ++  +  +    F   +A  +  LG+ A D LTAYSF+ +ENQV AAVK +PLGQ +GQR
Sbjct  119  MRDALAARAAITFPTAFAAAAVALGIEARDGLTAYSFAWVENQVAAAVKAIPLGQAAGQR  178

Query  173  ILWHLHEKVPQAVEQA---LALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            IL+ LH  V QA E A    A    E+S+  P   +LS +HETQYSRLFRS
Sbjct  179  ILFGLHAAVGQAAEDAARRAACHPPELSTFSPGLGVLSARHETQYSRLFRS  229


>Q3J772 Urease accessory protein UreF [Nitrosococcus oceani (strain 
ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107)]
Length=224

 Score = 144 bits (363),  Expect = 2e-46
 Identities = 85/221 (38%), Positives = 133/221 (60%), Gaps = 8/221 (4%)

Query  8    LLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKR  67
            L  LL L+S  LP+GAY YSQG+ESAI+ G++ D  S   +  + L M +  FE P+  R
Sbjct  4    LWPLLRLASPQLPIGAYTYSQGLESAIDQGIVWDADSVRLWLSDQLAMNIACFEAPLFAR  63

Query  68   LMQSYADEE--QFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMPVEVKKQF-G  124
            ++++ A  +  Q   WA+ Y ASRE++EL  ES+Q+ FSL   + D+ ++   ++ Q  G
Sbjct  64   MLEAAAQGQWQQLFYWAEEYVASRETRELYQESRQMGFSLVQLLNDLPELDEAMRHQLLG  123

Query  125  FVP-----VYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHE  179
            FV      V+A  +    L     + A+ +  LENQ+ A +K +PLGQ + QR+L  L  
Sbjct  124  FVEPPLPLVWAVAARTWNLDTRSAVAAWLWGWLENQLAALMKALPLGQQAAQRLLSQLLP  183

Query  180  KVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            ++ +A+E ALA  D+++++     ++ SM HETQY+RLFRS
Sbjct  184  ELDEALETALACSDEQLANGTLGLSIASMIHETQYTRLFRS  224


>Q21P92 Urease accessory protein UreF [Saccharophagus degradans 
(strain 2-40 / ATCC 43961 / DSM 17024)]
Length=221

 Score = 141 bits (355),  Expect = 3e-45
 Identities = 86/221 (39%), Positives = 126/221 (57%), Gaps = 6/221 (3%)

Query  4    NAAQLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELP  63
            N   L KL+ L S ALPVGAY YSQG+E A++ G ++ EA   A+   V+E  L   ++P
Sbjct  3    NNNSLQKLMYLVSPALPVGAYAYSQGLEFAVDGGWLKTEADVSAWIAGVMENSLAELDMP  62

Query  64   ILKRLMQSY--ADEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMP--VEV  119
            +L R+ +++   D EQ   W    +A RE+ ELL E  QL  +L   +   L++P   EV
Sbjct  63   VLVRIYKAWQQGDIEQVKYWNHFLRAGRETHELLLEDDQLGIALKRLLIS-LEIPHAAEV  121

Query  120  KKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHE  179
            +K   F  ++A       +    +L  ++++ LENQV AA K VP GQ   Q+++  L  
Sbjct  122  EKP-AFATLFALAGVHWQVPIEQLLQGFAWTWLENQVAAATKLVPFGQTQAQKVILALQP  180

Query  180  KVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
             +  A E+A  L+DDE+ + LP  A+ S +HE QYSRLFRS
Sbjct  181  NIAPACEKAFILKDDELGAGLPALAIASAKHERQYSRLFRS  221


>O06708 Urease accessory protein UreE / Urease accessory protein 
UreF [Bordetella bronchiseptica]
Length=433

 Score = 144 bits (364),  Expect = 1e-44
 Identities = 92/230 (40%), Positives = 129/230 (56%), Gaps = 11/230 (5%)

Query  2    SINAAQLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFE  61
            S++A QL  LL LSS ALP+G + YSQG+E+AIE GL+ DEAS++A+ E  L  ++ R E
Sbjct  204  SLDAGQLAALLHLSSPALPIGGFSYSQGLEAAIELGLVHDEASTLAWIESQLVTVMARAE  263

Query  62   LPILKRLMQSY--ADEEQFLLWADLYKASRESKELLAESQQLAFSLN------AWIKDVL  113
             P+   L +++   D+     W   + ASRE++EL  E++Q+  SL        W     
Sbjct  264  APLWCLLFEAWRAGDDAAAHGWNQWFHASRETRELRQETEQMGRSLARLAQELGWGTAAT  323

Query  114  KMPVEVKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRI  173
            +  V   +      V+A       L     L AY FS LENQV AA+K VPLGQM+GQR+
Sbjct  324  RAAVAALRPATLPAVHACACAMWALPREAGLGAYVFSWLENQVAAAIKGVPLGQMAGQRM  383

Query  174  LWHLHEKVPQAVEQALA---LEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            L  L   +P  +  A A        + +  P YA++S +HETQ+SRLFRS
Sbjct  384  LERLRAGLPAVLADARARAGATPPRLDTFAPQYALVSARHETQFSRLFRS  433


>Q9FAS3 Urease accessory protein UreF [Vibrio parahaemolyticus]
Length=221

 Score = 125 bits (313),  Expect = 5e-39
 Identities = 81/223 (36%), Positives = 127/223 (57%), Gaps = 17/223 (8%)

Query  9    LKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKRL  68
            L+L  L S +LPVGA+ YSQG+E AIE G ++DE S   +    ++  L   E+PIL +L
Sbjct  5    LRLYQLISPSLPVGAFTYSQGLEWAIEKGWVKDEQSLALWLTSQMQGSLATLEIPILIQL  64

Query  69   -----MQSYADEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMPVEVKKQF  123
                 +Q+Y   E+   W D   ASRE+KEL  E +Q      A+ K + ++ +++ ++ 
Sbjct  65   HHLLGVQNY---EKAQYWCDFIVASRETKELRIEERQRGA---AFAKLLPQLGIDLSERT  118

Query  124  ------GFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHL  177
                    V  +A  + +  +    + +AY +S LEN V+A VK +PLGQ +GQ++L  L
Sbjct  119  FPLVNQTQVAAFALAAEKWEIPLVKLCSAYMWSWLENAVMAGVKLIPLGQTAGQKLLIDL  178

Query  178  HEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
             + VP+ +E+++    D + S  P   + S QHETQY+RLFRS
Sbjct  179  TKFVPEVIEKSMRWPCDRIGSFTPAQVIASCQHETQYTRLFRS  221


>P17091 Urease accessory protein UreF [Proteus mirabilis (strain 
HI4320)]
Length=222

 Score = 121 bits (303),  Expect = 2e-37
 Identities = 81/221 (37%), Positives = 120/221 (54%), Gaps = 13/221 (6%)

Query  9    LKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKRL  68
            L+L  L S +LPVGA+ YSQG+E AIE G +    +   +    +   L   ELPIL++L
Sbjct  6    LRLYQLVSPSLPVGAFTYSQGLEWAIEKGWVCSAETLSDWLSAQMTGTLATLELPILRQL  65

Query  69   MQSYA--DEEQFLLWADLYKASRESKELLAESQQ--LAFS-----LNAWIKDVLKMPVEV  119
              S A  D +    W D   ASRE+KEL  E +Q  +AF+     L   + D L+  V+ 
Sbjct  66   QTSLAKGDSDTVKYWCDFMVASRETKELRQEERQRGIAFARLLPQLGIELDDTLQQRVKQ  125

Query  120  KKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHE  179
             +   F    A  +    + +  +  AY +  LEN V++ VK VPLGQ +GQ++L+ L E
Sbjct  126  TQLMAF----ALAAVHWHIDSEKLCCAYVWGWLENTVMSGVKLVPLGQSAGQKMLFALAE  181

Query  180  KVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            ++P  VE +     +++ S  P   + S +HETQY+RLFRS
Sbjct  182  QIPAIVELSAHWPQEDIGSFTPAQVIASSRHETQYTRLFRS  222


>Q8X9U5 Urease accessory protein UreF [Escherichia coli O157:H7]
Length=224

 Score = 111 bits (277),  Expect = 1e-33
 Identities = 72/217 (33%), Positives = 118/217 (54%), Gaps = 5/217 (2%)

Query  9    LKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKRL  68
            L+L+ L+S +LPVG Y +SQG+E A+E G ++D A+   + +  +E      +LP+L RL
Sbjct  8    LRLMQLASNSLPVGGYSWSQGLEWAVEAGWVEDSAAFEHWQQLQMEQSFFAVDLPLLARL  67

Query  69   MQSY--ADEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLK-MPVEVKK--QF  123
             ++    D +    W     A RE++EL  E +    +    + D     P E +K  Q 
Sbjct  68   YRACEAGDPDSAGRWTAYLLACRETRELRDEERNRGAAFTRLLVDWQPDCPAEWRKLCQQ  127

Query  124  GFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHEKVPQ  183
              +   A L  R  +S +D+  +  +S +E+ V+A V+ VP GQ++ Q+++  L  +   
Sbjct  128  SQLTGMAWLGVRWQISVSDLALSLGYSWIESAVMAGVRLVPYGQLAAQQLIMRLCARYAA  187

Query  184  AVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
             ++ ALA  D  + SA P  ++ S +HETQYSRLFRS
Sbjct  188  NMDSALATPDHAIGSATPLASIASARHETQYSRLFRS  224


>P18318 Urease accessory protein UreF [Klebsiella aerogenes]
Length=224

 Score = 102 bits (254),  Expect = 3e-30
 Identities = 73/222 (33%), Positives = 113/222 (51%), Gaps = 7/222 (3%)

Query  5    AAQLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPI  64
            A Q L+L+ L+S+ LPVG Y +SQG+E A+E G + D A+   +    +       +LP+
Sbjct  4    AEQRLRLMQLASSNLPVGGYSWSQGLEWAVEAGWVLDVAAFERWQRRQMTEGFFTVDLPL  63

Query  65   LKRLMQS--YADEEQFLLWADLYKASRESKELLAESQQ----LAFSLNAWIKDVLKMPVE  118
              RL ++    D      W     A RE++EL  E +      A  L+ W  D    P  
Sbjct  64   FARLYRACEQGDIAAAQRWTAYLLACRETRELREEERNRGAAFARLLSDWQPDC-PPPWR  122

Query  119  VKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLH  178
               Q   +   A L  R  ++  ++  +  +S +E+ V+A VK VP GQ + Q+++  L 
Sbjct  123  SLCQQSQLAGMAWLGVRWRIALPEMALSLGYSWIESAVMAGVKLVPFGQQAAQQLILRLC  182

Query  179  EKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            +     + +ALA  D ++ SA P  A+ S +HETQYSRLFRS
Sbjct  183  DHYAAEMPRALAAPDGDIGSATPLAAIASARHETQYSRLFRS  224


>O54423 Urease accessory protein UreF [Actinobacillus pleuropneumoniae]
Length=227

 Score = 79.3 bits (194),  Expect = 2e-21
 Identities = 66/225 (29%), Positives = 105/225 (47%), Gaps = 11/225 (5%)

Query  7    QLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILK  66
            QL  LL L    LP+G + +S G+E+ ++ G +   AS   Y +  L    +  +   L 
Sbjct  3    QLGALLHLVDPTLPIGGFNHSNGLETFVQQGKVNSRASLEEYVQTQLMQNWIYNDGAYLS  62

Query  67   RLMQSYA--DEEQFLLWADLYKASRESKELLAESQQLAFSL--------NAWIKDVLKMP  116
                + A  D ++ L       AS+ ++E    S +L   L        N  +    +  
Sbjct  63   LAFDAMANHDLDRLLALDQELAASKIARESREGSYKLGVRLLKIFIRYENHPLLSEFQQA  122

Query  117  VEVKKQFGFVP-VYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILW  175
            V  K+  G+ P V+A ++  + L  A+ L A+ ++     V   VK VPL QM GQ IL+
Sbjct  123  VSEKRCQGYFPIVFAMVAQAMNLDKAETLYAFYYNAAVGVVTNGVKLVPLSQMDGQDILF  182

Query  176  HLHEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
             L   + QAVE +L  + D + +A     + SMQHE  Y+RL+ S
Sbjct  183  ALRTPLAQAVENSLNPDLDWLGAATLASDIRSMQHEQLYTRLYMS  227


>Q09065 Urease accessory protein UreF [Helicobacter pylori (strain 
ATCC 700392 / 26695)]
Length=254

 Score = 78.2 bits (191),  Expect = 7e-21
 Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 16/223 (7%)

Query  11   LLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKRLMQ  70
            +L ++    P+G+Y +S G+E+ I+   + ++ S++ Y +  L    +  E+  LK   +
Sbjct  35   ILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYE  94

Query  71   S--YADEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMP-----------V  117
            S    D ++ L   ++   S    EL   +Q+L    N +IK +  M             
Sbjct  95   SALQQDLKKILGVEEVIMLSTSPMELRLANQKLG---NRFIKTLQAMNELDMGEFFNAYA  151

Query  118  EVKKQFGFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHL  177
            +  K       Y   +  LG+     L  Y ++   N V+  VK+VPL Q  GQ+IL  L
Sbjct  152  QKTKDPTHATSYGVFAASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSL  211

Query  178  HEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
                 Q +E+ L L++  + +A     + +MQHE+ YSRL+ S
Sbjct  212  QSPFNQLIEKTLELDESHLCTASVQNDIKAMQHESLYSRLYMS  254


>Q8RPX8 Urease accessory protein UreF [Rhizobium leguminosarum 
bv. viciae]
Length=223

 Score = 70.5 bits (171),  Expect = 3e-18
 Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query  8    LLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKR  67
            LL+L    S A P+G + YS G+E A+  GL+ D AS  A+   ++       +  +L  
Sbjct  10   LLRLTAWLSPAFPIGGFAYSGGLERAVADGLVTDAASLAAWIGTLVGNGSAWNDAVLLAE  69

Query  68   LMQSYADEEQFLLWADLYKASRESKELLAESQQL--AF--SLNAWIKDVLKMPVEVKKQF  123
              +  A   +    A L +A   S+E   E+  L  AF  +  AW   V +    +  + 
Sbjct  70   SHRQQAQPARLAEVAALAEALAGSRERHQETMLLGEAFLAAARAWPDGVFE---RLPDKV  126

Query  124  GFVPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSGQRILWHLHEKVPQ  183
             +      ++G  G+     L A+  + +   V + ++    GQ  G  +L  L + + +
Sbjct  127  AYPIAVGAVTGAHGIMPEKALAAFLHAYVSQAVSSGIRLGVAGQRDGLAVLAGLEDHIAE  186

Query  184  AVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
               +A A   D++ SA     + S++HETQ +RLFRS
Sbjct  187  VARRAAASALDDLGSATVQADIASLRHETQATRLFRS  223


>Q55056 Urease accessory protein UreF [Streptococcus salivarius 
(strain 57.I)]
Length=237

 Score = 68.9 bits (167),  Expect = 1e-17
 Identities = 50/230 (22%), Positives = 108/230 (47%), Gaps = 11/230 (5%)

Query  2    SINAAQLLKLLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFE  61
            +++    L+++ +  +  P+G++ +S G+E+ +    + D+     + E  L       E
Sbjct  8    NVSLQDYLEIVQIVDSTFPIGSFNHSFGMENYLREDTVTDDKGYEEWQEAYLASQFKYGE  67

Query  62   LPILKRLMQSYADE--EQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMPV--  117
              ++K +  + A +  EQ   +  +   S +++E    ++ +A  +   I+ +  +PV  
Sbjct  68   GLVIKLVYDAMATDNLEQVWHYDKVLTVSTQARETRQGTKMIAKQMLRLIQRLHAIPVLD  127

Query  118  ----EVKKQFGF---VPVYAQLSGRLGLSAADVLTAYSFSVLENQVLAAVKTVPLGQMSG  170
                +++K   F     V+A      GL  ++ +  Y +SV+   V  AV+ +PLGQ +G
Sbjct  128  DYQSKIRKGEVFGNPAIVFALYVFNKGLGCSEAIALYGYSVISTMVQNAVRAIPLGQFAG  187

Query  171  QRILWHLHEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
            Q I+     ++ +  ++   L+   + +  P   +  M+HETQ  RLF S
Sbjct  188  QEIVLRSFSQLEKMTQEIQELDASYLGANTPGLELAQMKHETQVFRLFMS  237


>Q79VJ2 Urease accessory protein UreF [Corynebacterium glutamicum 
(strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / 
LMG 3730 / NCIMB 10025)]
Length=226

 Score = 67.4 bits (163),  Expect = 4e-17
 Identities = 59/225 (26%), Positives = 112/225 (50%), Gaps = 22/225 (10%)

Query  11   LLTLSSTALPVGAYCYSQGVESAIETGLIQDEASSVAYFEEVLEMLLVRFELPILKRLMQ  70
            LL LS +ALP GA+ +S G E+ ++   I +      + + +L++ L   +   ++    
Sbjct  9    LLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYA  68

Query  71   SYADEEQFLLWADLYKASRESKELLAESQQLAFSLNAWIKDVLKMPVEVKKQFGFVPVYA  130
            +    E   L   L+ A   ++E+   + ++   +   + +   +P+ V  ++  +  + 
Sbjct  69   TPTVSELKRLDERLF-AGTPAREIREANARMGTRMAEIVAETYSVPLIV--EYLELIQHR  125

Query  131  QLSGRLGLSAA--------DV-------LTAYSFSVLENQVLAAVKTVPLGQMSGQRILW  175
            +LSG   L+ A        DV       LTA   S+++N    AV+ +PLGQM+GQR+++
Sbjct  126  ELSGHPALALALATHSAGIDVDRAIHAHLTATVSSLIQN----AVRGIPLGQMAGQRVMF  181

Query  176  HLHEKVPQAVEQALALEDDEMSSALPHYAMLSMQHETQYSRLFRS  220
             + E +  AV+++  L++ +  S  P   +  M HETQ +RLF S
Sbjct  182  AMREHIGAAVKRSANLDEIDFCSGDPGLDISQMVHETQRARLFMS  226



Lambda      K        H        a         alpha
   0.321    0.132    0.369    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 702575


  Database: 3baa73c9ecc140d329c29f82b47df353.SwissProt.fasta
    Posted date:  May 9, 2024  5:43 PM
  Number of letters in database: 4,765
  Number of sequences in database:  20



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40