Comparative Genomics

ACIAD1099 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: a187418c4e71ca5e3ed7a3ef33c2fdb4.TrEMBL.fasta
           11 sequences; 969 total letters



Query= ACIAD1099

Length=78
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SBN9 Secreted protein [Acinetobacter sp]                        156     3e-56
Q6FD76 Secreted protein [Acinetobacter baylyi (strain ATCC 33305 ...  156     3e-56
A0A427LT45 Uncharacterized protein [Acinetobacter soli]               82.0    8e-27
A0A1P8EMR6 Uncharacterized protein [Acinetobacter soli]               80.9    2e-26
N9BTC9 Uncharacterized protein [Acinetobacter soli NIPH 2899]         80.1    4e-26
N9C2Z9 Uncharacterized protein [Acinetobacter ursingii ANC 3649]      77.4    5e-25
A0A7T9UID0 Uncharacterized protein [Acinetobacter ursingii]           72.0    7e-23
A0A3A8EP03 Uncharacterized protein [Acinetobacter guerrae]            71.2    1e-22
A0A009Z639 Uncharacterized protein [Acinetobacter sp. 479375]         70.1    4e-22
A0A3D2SMH5 Uncharacterized protein [Acinetobacter ursingii]           68.9    1e-21
A0A359G4H0 Endolytic murein transglycosylase [Alistipes sp]           35.4    9e-08


>A0A7G2SBN9 Secreted protein [Acinetobacter sp]
Length=77

 Score = 156 bits (395),  Expect = 3e-56
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MKKFRVFTFIFLTMAGFLLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERR  60
           MKKFRVFTFIFLTMAGFLLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERR
Sbjct  1   MKKFRVFTFIFLTMAGFLLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERR  60

Query  61  EEEIIRNVRPVYLDRPE  77
           EEEIIRNVRPVYLDRPE
Sbjct  61  EEEIIRNVRPVYLDRPE  77


>Q6FD76 Secreted protein [Acinetobacter baylyi (strain ATCC 33305 
/ BD413 / ADP1)]
Length=77

 Score = 156 bits (395),  Expect = 3e-56
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MKKFRVFTFIFLTMAGFLLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERR  60
           MKKFRVFTFIFLTMAGFLLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERR
Sbjct  1   MKKFRVFTFIFLTMAGFLLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERR  60

Query  61  EEEIIRNVRPVYLDRPE  77
           EEEIIRNVRPVYLDRPE
Sbjct  61  EEEIIRNVRPVYLDRPE  77


>A0A427LT45 Uncharacterized protein [Acinetobacter soli]
Length=60

 Score = 82.0 bits (201),  Expect = 8e-27
 Identities = 39/58 (67%), Positives = 47/58 (81%), Gaps = 0/58 (0%)

Query  20  SLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERREEEIIRNVRPVYLDRPE  77
           SLS+QAQ+   ++NQL    QP WSLQ +QQ DDDDVRERREEEI+R+VRPV LDRP+
Sbjct  3   SLSVQAQSFSGYQNQLSNMHQPRWSLQPRQQLDDDDVRERREEEIVRDVRPVCLDRPD  60


>A0A1P8EMR6 Uncharacterized protein [Acinetobacter soli]
Length=60

 Score = 80.9 bits (198),  Expect = 2e-26
 Identities = 38/58 (66%), Positives = 47/58 (81%), Gaps = 0/58 (0%)

Query  20  SLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERREEEIIRNVRPVYLDRPE  77
           SLS+QAQ+   ++NQL    QP WSLQ +QQ DDDDVRERRE+EI+R+VRPV LDRP+
Sbjct  3   SLSVQAQSFSGYQNQLSNMHQPRWSLQPRQQLDDDDVRERREDEIVRDVRPVCLDRPD  60


>N9BTC9 Uncharacterized protein [Acinetobacter soli NIPH 2899]
Length=60

 Score = 80.1 bits (196),  Expect = 4e-26
 Identities = 38/58 (66%), Positives = 46/58 (79%), Gaps = 0/58 (0%)

Query  20  SLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERREEEIIRNVRPVYLDRPE  77
           SLS+QAQ+   ++NQL    QP WSLQ  QQ DDDDVRERREEE++R+VRPV LDRP+
Sbjct  3   SLSVQAQSFSGYQNQLSNMHQPRWSLQPTQQLDDDDVRERREEEMVRDVRPVCLDRPD  60


>N9C2Z9 Uncharacterized protein [Acinetobacter ursingii ANC 3649]
Length=59

 Score = 77.4 bits (189),  Expect = 5e-25
 Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 0/59 (0%)

Query  19  LSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERREEEIIRNVRPVYLDRPE  77
           +S+ IQAQ+ L   N L  H   HWSLQ QQQ DDDDVRERREEEI+R++RPV LDRP+
Sbjct  1   MSVPIQAQSSLASANLLSIHHIQHWSLQPQQQNDDDDVRERREEEIVRDIRPVRLDRPQ  59


>A0A7T9UID0 Uncharacterized protein [Acinetobacter ursingii]
Length=59

 Score = 72.0 bits (175),  Expect = 7e-23
 Identities = 36/59 (61%), Positives = 43/59 (73%), Gaps = 0/59 (0%)

Query  19  LSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERREEEIIRNVRPVYLDRPE  77
           +S+ IQAQ+ L   N    H   HWSLQ QQQ DDDDVRERREEEI+R++R V LDRP+
Sbjct  1   MSVPIQAQSSLASANLSPIHHIQHWSLQPQQQNDDDDVRERREEEIVRDIRAVRLDRPQ  59


>A0A3A8EP03 Uncharacterized protein [Acinetobacter guerrae]
Length=60

 Score = 71.2 bits (173),  Expect = 1e-22
 Identities = 35/61 (57%), Positives = 48/61 (79%), Gaps = 2/61 (3%)

Query  18  LLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDD-VRERREEEIIRNVRPVYLDRP  76
           +LSL  QAQ+ +   +Q++ H Q HWSLQ QQ+ DDDD VRERRE+EI+R++RPV +DRP
Sbjct  1   MLSLPTQAQSNMPIAHQMIDHSQ-HWSLQPQQKNDDDDDVRERREDEIVRDIRPVRMDRP  59

Query  77  E  77
           +
Sbjct  60  Q  60


>A0A009Z639 Uncharacterized protein [Acinetobacter sp. 479375]
Length=60

 Score = 70.1 bits (170),  Expect = 4e-22
 Identities = 36/60 (60%), Positives = 43/60 (72%), Gaps = 0/60 (0%)

Query  18  LLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERREEEIIRNVRPVYLDRPE  77
           +LS+ IQAQ  L   N    +   HWSLQ QQQ DDDDVRERREEEI+R++R V LDRP+
Sbjct  1   MLSVPIQAQISLPSANLSPIYHIQHWSLQPQQQNDDDDVRERREEEIVRDIRAVRLDRPQ  60


>A0A3D2SMH5 Uncharacterized protein [Acinetobacter ursingii]
Length=59

 Score = 68.9 bits (167),  Expect = 1e-21
 Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 0/59 (0%)

Query  19  LSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDVRERREEEIIRNVRPVYLDRPE  77
           +S+ IQAQ+ L   N    H   HWSLQ QQQ DDDDVRERREE I+R++R V LDRP+
Sbjct  1   MSVPIQAQSSLPSANLSPIHHIQHWSLQPQQQNDDDDVRERREEVIVRDIRAVRLDRPQ  59


>A0A359G4H0 Endolytic murein transglycosylase [Alistipes sp]
Length=338

 Score = 35.4 bits (80),  Expect = 9e-08
 Identities = 20/49 (41%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query  8   TFIFLTMAGFLLSLSIQAQTVLMFKNQLVGHQQPHWSLQVQQQADDDDV  56
           T ++L +AGF+L+ +  A   L FK   VG Q   + L V +QAD D V
Sbjct  5   TLLYLLLAGFVLAAAAAATGYLQFKGNAVGEQ---YELYVSRQADYDAV  50



Lambda      K        H        a         alpha
   0.334    0.144    0.433    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 40712


  Database: a187418c4e71ca5e3ed7a3ef33c2fdb4.TrEMBL.fasta
    Posted date:  May 20, 2024  8:48 AM
  Number of letters in database: 969
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40