Comparative Genomics

ACIAD1116 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 9b93b2d472ea6e5f2cf9f2e7064078a0.TrEMBL.fasta
           12 sequences; 2,464 total letters



Query= ACIAD1116

Length=212
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FD61 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter bayly...  437     2e-162
A0A7G2SHG8 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter sp]   434     1e-161
O52826 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter bayly...  374     5e-138
N8WB72 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter vivia...  260     8e-93 
N9NHU3 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter vivia...  260     8e-93 
A0A3N4R507 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter s...  259     1e-92 
N9FMX9 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter beije...  259     1e-92 
A0A6P1LHX1 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter d...  259     2e-92 
A0A6L8PZ12 5-formyltetrahydrofolate cyclo-ligase [Bacillus anthra...  62.4    8e-16 
O66124 5-formyltetrahydrofolate cyclo-ligase [Streptococcus mutans]   44.3    2e-09 
Q8LKF6 5-formyltetrahydrofolate cyclo-ligase [Solanum lycopersicum]   43.1    8e-09 
A0A8B0MGM7 5-formyltetrahydrofolate cyclo-ligase [Cladonia macile...  39.7    1e-07 


>Q6FD61 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=211

 Score = 437 bits (1123),  Expect = 2e-162
 Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%)

Query  1    MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS  60
            MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS
Sbjct  1    MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS  60

Query  61   QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA  120
            QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA
Sbjct  61   QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA  120

Query  121  LGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS  180
            LGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS
Sbjct  121  LGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS  180

Query  181  FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR  211
            FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR
Sbjct  181  FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR  211


>A0A7G2SHG8 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter 
sp]
Length=211

 Score = 434 bits (1117),  Expect = 1e-161
 Identities = 210/211 (99%), Positives = 210/211 (99%), Gaps = 0/211 (0%)

Query  1    MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS  60
            MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS
Sbjct  1    MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS  60

Query  61   QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA  120
            QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA
Sbjct  61   QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA  120

Query  121  LGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS  180
            LGMKEPM SRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS
Sbjct  121  LGMKEPMDSRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS  180

Query  181  FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR  211
            FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR
Sbjct  181  FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR  211


>O52826 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=180

 Score = 374 bits (959),  Expect = 5e-138
 Identities = 178/180 (99%), Positives = 179/180 (99%), Gaps = 0/180 (0%)

Query  32   INRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRKIILECFKLGKKVYL  91
            INRYL+LQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRKIILECFKLGKKVYL
Sbjct  1    INRYLRLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRKIILECFKLGKKVYL  60

Query  92   PMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHLDLLLMPLVACDDQG  151
            PMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHLDLLLMPLVACDDQG
Sbjct  61   PMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHLDLLLMPLVACDDQG  120

Query  152  TRMGMGGGFYDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPLDALLTPEKCYRFKR  211
            TRMGMGGGFYD TLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPLDALLTPEKCYRFKR
Sbjct  121  TRMGMGGGFYDXTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPLDALLTPEKCYRFKR  180


>N8WB72 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter vivianii]
Length=195

 Score = 260 bits (664),  Expect = 8e-93
 Identities = 123/195 (63%), Positives = 152/195 (78%), Gaps = 3/195 (2%)

Query  17   EIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTR  76
            ++K LRK++  +RR ++ Y Q Q+EQ+ L Q R    +    +S+ IGLYLHAFGEI+TR
Sbjct  4    DLKLLRKQLRFKRRQLSSYEQKQAEQQVLIQLRT---SVSFKTSRKIGLYLHAFGEIHTR  60

Query  77   KIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSH  136
            KI+  CF+ GK+VYLPMICN+NQ LVW+ I   QYFN+RF HH LGMKEPMA+RG HVSH
Sbjct  61   KILRLCFQQGKQVYLPMICNMNQRLVWVRIDSKQYFNQRFSHHPLGMKEPMANRGQHVSH  120

Query  137  LDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQP  196
            LDLL+MPL+ACD  GTR+GMGGGFYDRTL ++   P+RLGLAH FQY++Q L RQ WDQP
Sbjct  121  LDLLIMPLLACDSSGTRIGMGGGFYDRTLASAQRRPYRLGLAHDFQYVEQPLLRQKWDQP  180

Query  197  LDALLTPEKCYRFKR  211
            LD LLTP+K Y FKR
Sbjct  181  LDGLLTPKKFYYFKR  195


>N9NHU3 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter vivianii]
Length=195

 Score = 260 bits (664),  Expect = 8e-93
 Identities = 124/195 (64%), Positives = 152/195 (78%), Gaps = 3/195 (2%)

Query  17   EIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTR  76
            ++K LRK++  +RR ++ Y Q Q+EQ+ L Q R    +    +S+ IGLYLHAFGEI+TR
Sbjct  4    DLKLLRKQLRFKRRQLSSYEQKQAEQQVLIQLRT---SVPFKNSRKIGLYLHAFGEIHTR  60

Query  77   KIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSH  136
            KI+  CF+ GK+VYLPMICN+NQ LVWI I   QYFN+RF HH LGMKEPMA+RG HVSH
Sbjct  61   KILRLCFQQGKQVYLPMICNMNQRLVWIRIDSKQYFNQRFSHHPLGMKEPMANRGQHVSH  120

Query  137  LDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQP  196
            LDLL+MPL+ACD  GTR+GMGGGFYDRTL ++   P+RLGLAH FQY++Q L RQ WDQP
Sbjct  121  LDLLIMPLLACDSSGTRIGMGGGFYDRTLASAQRRPYRLGLAHDFQYVEQPLLRQKWDQP  180

Query  197  LDALLTPEKCYRFKR  211
            LD LLTP+K Y FKR
Sbjct  181  LDGLLTPKKFYYFKR  195


>A0A3N4R507 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter 
sp. BIGb0102]
Length=195

 Score = 259 bits (663),  Expect = 1e-92
 Identities = 122/195 (63%), Positives = 153/195 (78%), Gaps = 3/195 (2%)

Query  17   EIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTR  76
            ++K LRK++  +RR ++ Y Q Q+EQ+ L Q R    +    +S+ IGLYLHAFGEI+TR
Sbjct  4    DLKLLRKQLRFKRRQLSSYEQKQAEQQVLIQLRT---SVPFKTSRKIGLYLHAFGEIHTR  60

Query  77   KIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSH  136
            KI+  CF+ GK+VYLPMICN+NQ LVW+ +   QYFN+RF HH LGMKEPMA+RG HVSH
Sbjct  61   KILRLCFQQGKQVYLPMICNMNQRLVWVRVDSKQYFNQRFSHHPLGMKEPMANRGQHVSH  120

Query  137  LDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQP  196
            LDLL+MPL+ACD  GTR+GMGGGFYDRTL ++   P+RLGLAH+FQY++Q L RQ WDQP
Sbjct  121  LDLLIMPLLACDSSGTRIGMGGGFYDRTLASAQQRPYRLGLAHNFQYVEQPLLRQKWDQP  180

Query  197  LDALLTPEKCYRFKR  211
            LD LLTP+K Y FKR
Sbjct  181  LDGLLTPKKFYYFKR  195


>N9FMX9 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter beijerinckii 
CIP 110307]
Length=193

 Score = 259 bits (662),  Expect = 1e-92
 Identities = 124/192 (65%), Positives = 150/192 (78%), Gaps = 3/192 (2%)

Query  18   IKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRK  77
            +K LRK I  +R+ +NR+     EQ  L Q R F+      S+Q IGLYLHAFGE++T+K
Sbjct  5    LKTLRKHIRLKRKCLNRFEHANIEQAILNQLRYFI---HFKSAQKIGLYLHAFGEVHTKK  61

Query  78   IILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHL  137
            II  CF+  K+VYLPMICN+NQTLVW+EI+  QYF++RF HH LGMKEPMASRG+HVS L
Sbjct  62   IIELCFRHKKQVYLPMICNMNQTLVWVEISSHQYFSKRFSHHPLGMKEPMASRGYHVSKL  121

Query  138  DLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPL  197
            DLL+MPLVACD  GTR+GMGGG+YDRTL T+ H PFRLG+AHSFQY+DQ + RQ WDQPL
Sbjct  122  DLLIMPLVACDHAGTRIGMGGGYYDRTLATAPHRPFRLGIAHSFQYIDQPIIRQKWDQPL  181

Query  198  DALLTPEKCYRF  209
            D+LLT EK Y F
Sbjct  182  DSLLTSEKRYDF  193


>A0A6P1LHX1 5-formyltetrahydrofolate cyclo-ligase [Acinetobacter 
dispersus]
Length=195

 Score = 259 bits (662),  Expect = 2e-92
 Identities = 118/194 (61%), Positives = 153/194 (79%), Gaps = 3/194 (2%)

Query  18   IKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRK  77
            + +LRK++  +RR ++ Y Q ++EQ+ L   RQF   +R  S+  IGLYLHAFGE++T +
Sbjct  5    LNSLRKQLRSKRRQLSIYEQNKAEQQVLVHLRQF---SRFKSASKIGLYLHAFGEVHTNQ  61

Query  78   IILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHL  137
            ++  CF+  K+VYLPMICN+NQ LVW+ ++  QY N+RF HH LGMKEPMASRG HVSHL
Sbjct  62   LLKLCFRQNKQVYLPMICNMNQNLVWVRVSARQYLNKRFSHHPLGMKEPMASRGQHVSHL  121

Query  138  DLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPL  197
            DLL+MPL+ACD +GTR+GMGGG+YDRTL T+ H P+RLGLAH+FQY+DQ LFR  WDQPL
Sbjct  122  DLLIMPLLACDHEGTRIGMGGGYYDRTLATAIHRPYRLGLAHNFQYIDQSLFRHKWDQPL  181

Query  198  DALLTPEKCYRFKR  211
            D LL+P+K Y FKR
Sbjct  182  DGLLSPKKFYHFKR  195


>A0A6L8PZ12 5-formyltetrahydrofolate cyclo-ligase [Bacillus anthracis]
Length=192

 Score = 62.4 bits (150),  Expect = 8e-16
 Identities = 53/186 (28%), Positives = 96/186 (52%), Gaps = 16/186 (9%)

Query  21   LRKKIIRQRRFIN--RYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRKI  78
            LRK+II     ++  RY  L SEQ     + Q         ++ IG+ L    E+ T  I
Sbjct  8    LRKQIIEHMNSLSKERYTTL-SEQIVFSLYEQ----KEWAEAKTIGITLSMENEVNTYPI  62

Query  79   ILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVS--H  136
            I + +K GK+V +P      +T+ + +I+        +    + ++EP+ +    V+   
Sbjct  63   IEKAWKEGKRVVVPKCNKETRTMSFRQISNFDQLETVY----MNLREPIPALTEEVNADE  118

Query  137  LDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQP  196
            +DL ++P VA  ++G R+G GGG+YDR LV   +    L LA+SFQ ++  +  + +D+ 
Sbjct  119  IDLQIVPGVAYTERGERIGYGGGYYDRYLV--HYKGKTLSLAYSFQMVEH-IPVEPFDKN  175

Query  197  LDALLT  202
            ++ ++T
Sbjct  176  VEKIIT  181


>O66124 5-formyltetrahydrofolate cyclo-ligase [Streptococcus mutans]
Length=178

 Score = 44.3 bits (103),  Expect = 2e-09
 Identities = 35/155 (23%), Positives = 70/155 (45%), Gaps = 22/155 (14%)

Query  11   QPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAF  70
            Q +  L+ +   KK++R  + +   +QL++ QK                +  I  YL   
Sbjct  9    QVIEDLKKQDKAKKVLRDEQLLEELIQLEAYQK----------------AHVIATYLAFP  52

Query  71   GEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASR  130
             E  T  +I +  +  K + +P      + ++++   +      +F     G+KEP +  
Sbjct  53   FEFDTSLLIEQAQRDNKSIVVPKTYP-QRKMIFVVYDEADLQITKF-----GLKEPRSEE  106

Query  131  GHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTL  165
                S +DL+ +P +A +++G R+G G G+YD+ L
Sbjct  107  ALEKSAIDLIHVPGLAFNNEGYRIGFGAGYYDQYL  141


>Q8LKF6 5-formyltetrahydrofolate cyclo-ligase [Solanum lycopersicum]
Length=273

 Score = 43.1 bits (100),  Expect = 8e-09
 Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 26/157 (17%)

Query  69   AFGEIYTRKIILECF----KLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMK  124
            A  E+ T +I+        ++ KK+++P + + N+ +  + I+ T+        +++ + 
Sbjct  106  ALREVDTSRILSHILSSHSEMRKKLFVPRVEDRNRNMRMLNISSTE----DLIANSMNIL  161

Query  125  EP--MASRGHHVSHL-------DLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSH-----  170
            EP  + + G+    +       DLL++P +A D  G R+G GGG+YD  L          
Sbjct  162  EPAPLDAEGNEREDVLFANEPVDLLILPGLAFDKAGRRLGRGGGYYDTFLSRYQELAEKR  221

Query  171  ---TPFRLGLAHSFQYLDQKLFRQSWDQPL-DALLTP  203
                P ++ L++S Q +D+     + +  L DAL++P
Sbjct  222  NWKQPLKVALSYSVQIVDEGTIPLTPNDVLVDALVSP  258


>A0A8B0MGM7 5-formyltetrahydrofolate cyclo-ligase [Cladonia macilenta]
Length=246

 Score = 39.7 bits (91),  Expect = 1e-07
 Identities = 29/72 (40%), Positives = 38/72 (53%), Gaps = 7/72 (10%)

Query  137  LDLLLMPLVACDDQGTRMGMGGGFYDRTL-----VTSSHTPFRLGLAHSFQYL--DQKLF  189
            LD+++MP VA D    R+G G GFYD  L        +  PF +GLA   Q L  DQ + 
Sbjct  161  LDMIIMPGVAFDKGLARLGHGKGFYDVFLERYHFAKVAPMPFLVGLALEAQLLPEDQSIP  220

Query  190  RQSWDQPLDALL  201
              + D  LDAL+
Sbjct  221  TDASDWQLDALV  232



Lambda      K        H        a         alpha
   0.330    0.141    0.441    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 349392


  Database: 9b93b2d472ea6e5f2cf9f2e7064078a0.TrEMBL.fasta
    Posted date:  May 30, 2024  12:19 PM
  Number of letters in database: 2,464
  Number of sequences in database:  12



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40