BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 1a42beea731d7098366e79a0efb2ed2d.SwissProt.fasta
           2 sequences; 240 total letters



Query= ACIAD1118

Length=135
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P77682 Prophage bactoprenol-linked glucose translocase homolog [E...  35.0    7e-08
Q9T1D7 Bactoprenol-linked glucose translocase [Shigella phage SfX]    34.3    1e-07


>P77682 Prophage bactoprenol-linked glucose translocase homolog 
[Escherichia coli (strain K12)]
Length=120

 Score = 35.0 bits (79),  Expect = 7e-08
 Identities = 27/88 (31%), Positives = 43/88 (49%), Gaps = 16/88 (18%)

Query  14  FARFGVIGICAACTH-----VCVVLVLTKMSIALAVANIAGFLVAFWVSYFGHLYFTFGH  68
           FA++  IG+     H     VC+ +  T      A+AN AGF+VA   S+F +  FTF  
Sbjct  5   FAKYTSIGVLNTLIHWVVFGVCIYVAHTNQ----ALANFAGFVVAVSFSFFANAKFTF--  58

Query  69  QASRSKRTLIKFILVACSGFLVNESLVV  96
              ++  T ++++L    GF+   S  V
Sbjct  59  ---KASTTTMRYMLYV--GFMGTLSATV  81


 Score = 16.5 bits (31),  Expect = 0.20
 Identities = 6/31 (19%), Positives = 13/31 (42%), Gaps = 0/31 (0%)

Query  100  HISHLSNSFIVISAILCTSIISFLFNRYFAF  130
            +++H + +    +  +     SF  N  F F
Sbjct  28   YVAHTNQALANFAGFVVAVSFSFFANAKFTF  58


>Q9T1D7 Bactoprenol-linked glucose translocase [Shigella phage 
SfX]
Length=120

 Score = 34.3 bits (77),  Expect = 1e-07
 Identities = 27/88 (31%), Positives = 42/88 (48%), Gaps = 16/88 (18%)

Query  14  FARFGVIGICAACTH-----VCVVLVLTKMSIALAVANIAGFLVAFWVSYFGHLYFTFGH  68
           FA++  IG+     H     VC+    T      A+AN AGF+VA   S+F +  FTF  
Sbjct  5   FAKYTSIGVLNTLIHWVVFGVCIYAAHTNQ----AMANFAGFVVAVSFSFFANAKFTF--  58

Query  69  QASRSKRTLIKFILVACSGFLVNESLVV  96
              ++  T ++++L    GF+   S  V
Sbjct  59  ---KASTTTMRYMLYV--GFMGTLSATV  81



Lambda      K        H        a         alpha
   0.341    0.146    0.470    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 23868


  Database: 1a42beea731d7098366e79a0efb2ed2d.SwissProt.fasta
    Posted date:  May 8, 2024  3:11 PM
  Number of letters in database: 240
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40