BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f7d54f907bdb9d1be4ede58e4015ec46.TrEMBL.fasta
11 sequences; 1,440 total letters
Query= ACIAD1118
Length=135
Score E
Sequences producing significant alignments: (Bits) Value
Q6FD59 GtrA/DPMS transmembrane domain-containing protein [Acineto... 270 4e-99
A0A7G2SHX5 Polysaccharide biosynthesis protein GtrA [Acinetobacte... 268 2e-98
A0A1P8EIG3 Polysaccharide biosynthesis protein GtrA [Acinetobacte... 140 5e-48
A0A0M1I767 Polysaccharide biosynthesis protein GtrA [Acinetobacte... 139 3e-47
A0A3R8ZWJ6 GtrA family protein [Acinetobacter soli] 139 3e-47
N9AD69 GtrA/DPMS transmembrane domain-containing protein [Acineto... 137 7e-47
N8VBA5 GtrA/DPMS transmembrane domain-containing protein [Acineto... 122 5e-41
A0A4R0DHH3 GtrA family protein [Acinetobacter sp. ANC 4635] 121 2e-40
V2UDT9 GtrA/DPMS transmembrane domain-containing protein [Acineto... 120 4e-40
A0A1Y3CBJ1 Polysaccharide biosynthesis protein GtrA [Acinetobacte... 120 4e-40
A0A4R0D172 GtrA family protein [Acinetobacter sp. ANC 4641] 120 6e-40
>Q6FD59 GtrA/DPMS transmembrane domain-containing protein [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=134
Score = 270 bits (689), Expect = 4e-99
Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%)
Query 1 MFQSLKNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFG 60
MFQSLKNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFG
Sbjct 1 MFQSLKNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFG 60
Query 61 HLYFTFGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSII 120
HLYFTFGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSII
Sbjct 61 HLYFTFGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSII 120
Query 121 SFLFNRYFAFHPQG 134
SFLFNRYFAFHPQG
Sbjct 121 SFLFNRYFAFHPQG 134
>A0A7G2SHX5 Polysaccharide biosynthesis protein GtrA [Acinetobacter
sp]
Length=134
Score = 268 bits (684), Expect = 2e-98
Identities = 133/134 (99%), Positives = 133/134 (99%), Gaps = 0/134 (0%)
Query 1 MFQSLKNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFG 60
MFQSLKNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFG
Sbjct 1 MFQSLKNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFG 60
Query 61 HLYFTFGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSII 120
HLYFTFGHQASRSKRTLIKFILVACSGFLVNE LVVLLQHISHLSNSFIVISAILCTSII
Sbjct 61 HLYFTFGHQASRSKRTLIKFILVACSGFLVNERLVVLLQHISHLSNSFIVISAILCTSII 120
Query 121 SFLFNRYFAFHPQG 134
SFLFNRYFAFHPQG
Sbjct 121 SFLFNRYFAFHPQG 134
>A0A1P8EIG3 Polysaccharide biosynthesis protein GtrA [Acinetobacter
soli]
Length=134
Score = 140 bits (354), Expect = 5e-48
Identities = 67/129 (52%), Positives = 94/129 (73%), Gaps = 0/129 (0%)
Query 6 KNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFGHLYFT 65
KN I QF RF +IG+CAA HV VV++L K +ALA +N+AGF VAFW+SYFGH YFT
Sbjct 6 KNQHISAQFIRFCLIGLCAAAIHVAVVIILEKTRLALAWSNLAGFGVAFWMSYFGHRYFT 65
Query 66 FGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFN 125
F ++ ++ + +F++VACSGFL+NE+LV+ L+ HL +F V++AI +S+ +FL N
Sbjct 66 FATSNAQHRQMMFRFLMVACSGFLLNEALVLSLKETFHLPTAFSVLTAIGFSSVFTFLLN 125
Query 126 RYFAFHPQG 134
R FAF P+G
Sbjct 126 RIFAFQPEG 134
>A0A0M1I767 Polysaccharide biosynthesis protein GtrA [Acinetobacter
sp. C15]
Length=134
Score = 139 bits (349), Expect = 3e-47
Identities = 67/129 (52%), Positives = 93/129 (72%), Gaps = 0/129 (0%)
Query 6 KNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFGHLYFT 65
KN I QF RF +IG+CAA HV VV++L K +ALA +N+AGF VAFW+SYFGH YFT
Sbjct 6 KNQHISAQFIRFCLIGLCAAAIHVTVVIILEKTRLALAWSNLAGFGVAFWMSYFGHRYFT 65
Query 66 FGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFN 125
F ++ ++ + +F++VACSGFL+NE+LV+ L+ HL +F V +AI +S+ +FL N
Sbjct 66 FATSNAQHRQMMFRFLMVACSGFLLNEALVLSLKEAFHLPTAFSVSTAIGFSSVFTFLLN 125
Query 126 RYFAFHPQG 134
R FAF P+G
Sbjct 126 RIFAFQPEG 134
>A0A3R8ZWJ6 GtrA family protein [Acinetobacter soli]
Length=134
Score = 139 bits (349), Expect = 3e-47
Identities = 67/129 (52%), Positives = 93/129 (72%), Gaps = 0/129 (0%)
Query 6 KNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFGHLYFT 65
KN I QF RF +IG+CAA HV VV++L K +ALA +N+AGF VAFW+SYFGH YFT
Sbjct 6 KNQHISAQFIRFCLIGLCAAAIHVTVVIILEKTRLALAWSNLAGFGVAFWMSYFGHRYFT 65
Query 66 FGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFN 125
F ++ ++ + +F++VACSGFL+NE+LV+ L+ HL +F V +AI +S+ +FL N
Sbjct 66 FATSNAQHRQMMFRFLMVACSGFLLNEALVLSLKEAFHLPTAFSVSTAIGFSSVFTFLLN 125
Query 126 RYFAFHPQG 134
R FAF P+G
Sbjct 126 RIFAFQPEG 134
>N9AD69 GtrA/DPMS transmembrane domain-containing protein [Acinetobacter
soli NIPH 2899]
Length=134
Score = 137 bits (346), Expect = 7e-47
Identities = 66/129 (51%), Positives = 93/129 (72%), Gaps = 0/129 (0%)
Query 6 KNLQIFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFGHLYFT 65
KN I QF RF +IG+CAA HV VV++L K +ALA +N+AGF +AFW+SYFGH YFT
Sbjct 6 KNQHISAQFIRFCLIGLCAAAIHVTVVIILEKTRLALAWSNLAGFGMAFWMSYFGHRYFT 65
Query 66 FGHQASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFN 125
F ++ ++ + +F++VACSGFL+NE+LV+ L+ HL +F V +AI +S+ +FL N
Sbjct 66 FATSNAQHRQMMFRFLMVACSGFLLNEALVLSLKEAFHLPTAFSVSTAIGFSSVFTFLLN 125
Query 126 RYFAFHPQG 134
R FAF P+G
Sbjct 126 RIFAFQPEG 134
>N8VBA5 GtrA/DPMS transmembrane domain-containing protein [Acinetobacter
sp. ANC 3789]
Length=127
Score = 122 bits (307), Expect = 5e-41
Identities = 62/118 (53%), Positives = 84/118 (71%), Gaps = 1/118 (1%)
Query 14 FARFGVIGICAACTHVCVVLVL-TKMSIALAVANIAGFLVAFWVSYFGHLYFTFGHQASR 72
FARFG+IG+ AA TH +V++L +M IALA AN+ F +AFWVSYFGH +FTF Q
Sbjct 8 FARFGIIGVLAALTHYAIVILLFEQMHIALAYANLIAFCLAFWVSYFGHRHFTFQAQQLS 67
Query 73 SKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAF 130
++TL KF +VA GF+ NESL+++ H ++S S +VI AI T+I +FL NR+FAF
Sbjct 68 HRQTLPKFFIVATLGFVFNESLLLISHHYLNISLSILVIIAIFLTAIFTFLLNRFFAF 125
Score = 26.9 bits (58), Expect = 3e-04
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 0/58 (0%)
Query 76 TLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAFHPQ 133
T +F ++ L + ++V+LL H++ ++ + A +S+ +R+F F Q
Sbjct 7 TFARFGIIGVLAALTHYAIVILLFEQMHIALAYANLIAFCLAFWVSYFGHRHFTFQAQ 64
>A0A4R0DHH3 GtrA family protein [Acinetobacter sp. ANC 4635]
Length=127
Score = 121 bits (303), Expect = 2e-40
Identities = 61/118 (52%), Positives = 84/118 (71%), Gaps = 1/118 (1%)
Query 14 FARFGVIGICAACTHVCVVLVL-TKMSIALAVANIAGFLVAFWVSYFGHLYFTFGHQASR 72
FARFG+IG+ AA TH +V++L ++ IALA AN+ F +AFWVSYFGH +FTF Q
Sbjct 8 FARFGIIGVLAALTHYAIVILLFEQVHIALAYANLIAFCLAFWVSYFGHRHFTFQAQQLS 67
Query 73 SKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAF 130
++TL KF +VA GF+ NESL+++ H ++S S +VI AI T+I +FL NR+FAF
Sbjct 68 HRQTLPKFFIVATLGFVFNESLLLISHHYLNISLSILVIIAIFLTAIFTFLLNRFFAF 125
Score = 26.6 bits (57), Expect = 4e-04
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 0/58 (0%)
Query 76 TLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAFHPQ 133
T +F ++ L + ++V+LL H++ ++ + A +S+ +R+F F Q
Sbjct 7 TFARFGIIGVLAALTHYAIVILLFEQVHIALAYANLIAFCLAFWVSYFGHRHFTFQAQ 64
>V2UDT9 GtrA/DPMS transmembrane domain-containing protein [Acinetobacter
brisouii CIP 110357]
Length=127
Score = 120 bits (301), Expect = 4e-40
Identities = 62/118 (53%), Positives = 83/118 (70%), Gaps = 1/118 (1%)
Query 14 FARFGVIGICAACTHVCVVLVL-TKMSIALAVANIAGFLVAFWVSYFGHLYFTFGHQASR 72
FARFG+IG+ AA TH +V++L +M IALA AN+ F +AFWVSYFGH +FTF Q
Sbjct 8 FARFGIIGVLAALTHYAIVILLFEQMHIALAYANLIAFCLAFWVSYFGHRHFTFQAQQLS 67
Query 73 SKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAF 130
++TL KF +VA GF NESL+++ H ++S S +VI AI T+I +FL NR+FAF
Sbjct 68 HRQTLPKFFVVATLGFGFNESLLLISHHYLNISLSILVIIAIFLTAIFTFLLNRFFAF 125
Score = 26.9 bits (58), Expect = 3e-04
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 0/58 (0%)
Query 76 TLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAFHPQ 133
T +F ++ L + ++V+LL H++ ++ + A +S+ +R+F F Q
Sbjct 7 TFARFGIIGVLAALTHYAIVILLFEQMHIALAYANLIAFCLAFWVSYFGHRHFTFQAQ 64
>A0A1Y3CBJ1 Polysaccharide biosynthesis protein GtrA [Acinetobacter
sp. ANC 3903]
Length=128
Score = 120 bits (301), Expect = 4e-40
Identities = 56/123 (46%), Positives = 82/123 (67%), Gaps = 0/123 (0%)
Query 10 IFWQFARFGVIGICAACTHVCVVLVLTKMSIALAVANIAGFLVAFWVSYFGHLYFTFGHQ 69
+F+QF RFG+IG+ AA TH + ++L + +AVAN+ GFL AFWVSYFGH FTF
Sbjct 6 LFFQFLRFGIIGLLAALTHYALAMLLIHQKMNIAVANLLGFLTAFWVSYFGHRIFTFNVV 65
Query 70 ASRSKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFA 129
++TL KFI+VA +GF+ NE++++ L H + S ++I I+ T++ +F NR FA
Sbjct 66 QISHRQTLPKFIIVAVTGFVFNETMLIALHHFTPYPISILLIITIIVTALFTFFLNRIFA 125
Query 130 FHP 132
F P
Sbjct 126 FKP 128
>A0A4R0D172 GtrA family protein [Acinetobacter sp. ANC 4641]
Length=127
Score = 120 bits (300), Expect = 6e-40
Identities = 61/118 (52%), Positives = 83/118 (70%), Gaps = 1/118 (1%)
Query 14 FARFGVIGICAACTHVCVVLVLTKMS-IALAVANIAGFLVAFWVSYFGHLYFTFGHQASR 72
FARFG+IG+ AA TH +V++L + IALA AN+ F +AFWVSYFGH +FTF Q
Sbjct 8 FARFGIIGVLAALTHYAIVILLFERGHIALAYANLIAFCLAFWVSYFGHRHFTFQAQDLS 67
Query 73 SKRTLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAF 130
++TL KF +VA GF+ NESL+++ H ++S S +VI AI T+I +FL NR+FAF
Sbjct 68 HRQTLPKFFIVATLGFVFNESLLLISHHYLNISLSILVIIAIFLTAIFTFLLNRFFAF 125
Score = 27.3 bits (59), Expect = 2e-04
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 0/58 (0%)
Query 76 TLIKFILVACSGFLVNESLVVLLQHISHLSNSFIVISAILCTSIISFLFNRYFAFHPQ 133
T +F ++ L + ++V+LL H++ ++ + A +S+ +R+F F Q
Sbjct 7 TFARFGIIGVLAALTHYAIVILLFERGHIALAYANLIAFCLAFWVSYFGHRHFTFQAQ 64
Lambda K H a alpha
0.341 0.146 0.470 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 116550
Database: f7d54f907bdb9d1be4ede58e4015ec46.TrEMBL.fasta
Posted date: May 8, 2024 1:51 PM
Number of letters in database: 1,440
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
