BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a4abb19eb6a6218f421bf706ec215064.SwissProt.fasta
18 sequences; 5,451 total letters
Query= ACIAD1141
Length=337
Score E
Sequences producing significant alignments: (Bits) Value
P33915 Inner membrane ABC transporter permease protein YejE [Esch... 412 2e-148
P42063 Oligopeptide transport system permease protein AppC [Bacil... 164 7e-52
P45053 Oligopeptide transport system permease protein OppC [Haemo... 148 1e-45
P66965 Putative peptide transport permease protein Mb1313c [Mycob... 147 2e-45
P9WFZ9 Putative peptide transport permease protein Rv1282c [Mycob... 147 2e-45
P9WFZ8 Putative peptide transport permease protein MT1319 [Mycoba... 147 2e-45
P24139 Oligopeptide transport system permease protein OppC [Bacil... 145 1e-44
P26904 Dipeptide transport system permease protein DppC [Bacillus... 144 5e-44
P08006 Oligopeptide transport system permease protein OppC [Salmo... 140 1e-42
P94312 Dipeptide transport system permease protein DppC [Alkaliha... 139 4e-42
P0AFH6 Oligopeptide transport system permease protein OppC [Esche... 139 5e-42
P0AFH7 Oligopeptide transport system permease protein OppC [Esche... 139 5e-42
Q8FWN9 Putative peptide permease protein BRA0407/BS1330_II0404 [B... 135 8e-41
P51000 Dipeptide transport system permease protein DppC [Haemophi... 133 7e-40
P0A4N9 Oligopeptide transport system permease protein OppC [Lacto... 131 4e-39
P0A4P0 Oligopeptide transport system permease protein OppC [Lacto... 130 7e-39
P75799 Glutathione transport system permease protein GsiD [Escher... 129 2e-38
P0AEG1 Dipeptide transport system permease protein DppC [Escheric... 128 4e-38
>P33915 Inner membrane ABC transporter permease protein YejE [Escherichia
coli (strain K12)]
Length=341
Score = 412 bits (1060), Expect = 2e-148
Identities = 192/336 (57%), Positives = 258/336 (77%), Gaps = 0/336 (0%)
Query 1 MSPLMQERIKRFKQNRLGFWCFIIFIIIFVLSLMSELIANDKPLIVKYQQSYYFPVMQSY 60
+SP+ Q R RF+ NR G+W IF+++F LSL SELIANDKPL+V+Y S+YFP++++Y
Sbjct 4 LSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNY 63
Query 61 PETTFGGVFETETDYKDPAVQQLIDAKGWSIWPLIPFSYQTPNLDLAVPVPSPPTAQNWL 120
E+ FGG ++ DY+DP ++Q ++ GW +W I F + N P PSPP+ QNWL
Sbjct 64 SESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATNKPFPSPPSRQNWL 123
Query 121 GTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLIGQRLLEVW 180
GTD G DVLARILYG R+S+LFG LT S+++G+ GA+QGYYGG +DL GQR +EVW
Sbjct 124 GTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVW 183
Query 181 GGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYVRAARALGV 240
G+P LF++++L S+ PN +WL I +LFGW +LVG+VRAEFLR RN DY+RAA+ALGV
Sbjct 184 SGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGV 243
Query 241 KDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGELLLQGKNN 300
DR+II RH+LPNAM ++L+ LPF+L ++IT LT+LDFLG+GLP + SLGELLLQGKNN
Sbjct 244 SDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNN 303
Query 301 LTAPWLAMSGFFTLALVLSLLIYVGEATRDAFDPRQ 336
L APWL ++ F ++A++LSLLI++GEA RDAFDP +
Sbjct 304 LQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNK 339
>P42063 Oligopeptide transport system permease protein AppC [Bacillus
subtilis (strain 168)]
Length=303
Score = 164 bits (416), Expect = 7e-52
Identities = 93/226 (41%), Positives = 134/226 (59%), Gaps = 5/226 (2%)
Query 114 PTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLIG 173
P ++ +GTD GRD+ +RILYG RVSLL GFA S L+G +GA+ GY+ G +D +
Sbjct 76 PGLEHLMGTDKFGRDIFSRILYGARVSLLVGFASVVGSILIGTVLGALAGYFRGIVDAVI 135
Query 174 QRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYVR 233
R++++ +P +F+++ LV++F P V L LI L GWT LVR EFL R+ +YV
Sbjct 136 MRVVDIVLSIPDIFLLITLVTIFKPGVDKLILIFCLTGWTTTARLVRGEFLSLRSREYVL 195
Query 234 AARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGEL 293
AA+ +G K IIF HILPNA+ + + + I A +AL +LG+G+ P AS G +
Sbjct 196 AAKTIGTKTHKIIFSHILPNALGPIIVSATLKVGSVILAESALSYLGFGIQPPIASWGNM 255
Query 294 LLQGKN---NLTAPWLAM-SGFFTLALVLSLLIYVGEATRDAFDPR 335
L +N + A W + G F L VL +VG+ RDA DP+
Sbjct 256 LQDAQNFTVMIQAWWYPLFPGLFILMTVL-CFNFVGDGLRDALDPK 300
>P45053 Oligopeptide transport system permease protein OppC [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20
/ Rd)]
Length=311
Score = 148 bits (374), Expect = 1e-45
Identities = 83/241 (34%), Positives = 125/241 (52%), Gaps = 2/241 (1%)
Query 96 PFSYQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLG 155
PF+Y+ + ++ P+ ++ GTD GRD+L R G R+SLL G A F S +G
Sbjct 70 PFTYEDTDWNMMSAAPTME-GYHFFGTDASGRDLLVRTAIGGRISLLVGIAGAFISVTIG 128
Query 156 IFVGAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTAL 215
GAI GY GG D++ R LE+ P +F V++LV++F N++ +F+ + W L
Sbjct 129 TIYGAISGYVGGKTDMLMMRFLEILSSFPFMFFVILLVTLFGQNIFLIFIAIGAIAWLGL 188
Query 216 VGLVRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTA 275
+VR + L +N ++V AA GV R II +HI+PN + + I +
Sbjct 189 ARIVRGQTLSLKNKEFVEAAIVCGVPRRQIILKHIIPNVLGLVAVYASLEVPGLILFESF 248
Query 276 LDFLGYGLPPDAASLGELLLQGKNNL-TAPWLAMSGFFTLALVLSLLIYVGEATRDAFDP 334
L FLG G +S G LL G + +PWL + F L L L ++G+ RDA DP
Sbjct 249 LSFLGLGTQEPMSSWGALLSDGAAQMEVSPWLLIFPAFFLCLTLFCFNFIGDGLRDALDP 308
Query 335 R 335
+
Sbjct 309 K 309
>P66965 Putative peptide transport permease protein Mb1313c [Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97)]
Length=291
Score = 147 bits (372), Expect = 2e-45
Identities = 85/255 (33%), Positives = 136/255 (53%), Gaps = 6/255 (2%)
Query 83 LIDAKGWSIWPLIPFSYQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLL 142
L+ +++ PL+P+SY + + + PP ++WLGT+ G+D+LA+ L G++ S+L
Sbjct 30 LLFVSAYALPPLLPYSYDDLDFNALL---QPPGTKHWLGTNALGQDLLAQTLRGMQKSML 86
Query 143 FGFALTFFSALLGIFVGAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYW 202
G + S + VGAI GY+GGW D ++++ +P ++ I+ +
Sbjct 87 IGVCVAVISTGIAATVGAISGYFGGWRDRTLMWVVDLLLVVPSFILIAIVTPRTKNSANI 146
Query 203 LFLIMLL--FGWTALVGLVRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLS 260
+FL++LL FGW +VR + R +++RAAR +GV R II H++PN S +
Sbjct 147 MFLVLLLAGFGWMISSRMVRGMTMSLREREFIRAARYMGVSSRRIIVGHVVPNVASILII 206
Query 261 QLPFMLTANITALTALDFLGYGLPPDAASLGELLLQGKNNLTA-PWLAMSGFFTLALVLS 319
+ A I A T L FLG+G+ P SLG L+ G + TA PW+ + L L+L
Sbjct 207 DAALNVAAAILAETGLSFLGFGIQPPDVSLGTLIADGTASATAFPWVFLFPASILVLILV 266
Query 320 LLIYVGEATRDAFDP 334
G+ RDA DP
Sbjct 267 CANLTGDGLRDALDP 281
>P9WFZ9 Putative peptide transport permease protein Rv1282c [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=291
Score = 147 bits (372), Expect = 2e-45
Identities = 85/255 (33%), Positives = 136/255 (53%), Gaps = 6/255 (2%)
Query 83 LIDAKGWSIWPLIPFSYQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLL 142
L+ +++ PL+P+SY + + + PP ++WLGT+ G+D+LA+ L G++ S+L
Sbjct 30 LLFVSAYALPPLLPYSYDDLDFNALL---QPPGTKHWLGTNALGQDLLAQTLRGMQKSML 86
Query 143 FGFALTFFSALLGIFVGAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYW 202
G + S + VGAI GY+GGW D ++++ +P ++ I+ +
Sbjct 87 IGVCVAVISTGIAATVGAISGYFGGWRDRTLMWVVDLLLVVPSFILIAIVTPRTKNSANI 146
Query 203 LFLIMLL--FGWTALVGLVRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLS 260
+FL++LL FGW +VR + R +++RAAR +GV R II H++PN S +
Sbjct 147 MFLVLLLAGFGWMISSRMVRGMTMSLREREFIRAARYMGVSSRRIIVGHVVPNVASILII 206
Query 261 QLPFMLTANITALTALDFLGYGLPPDAASLGELLLQGKNNLTA-PWLAMSGFFTLALVLS 319
+ A I A T L FLG+G+ P SLG L+ G + TA PW+ + L L+L
Sbjct 207 DAALNVAAAILAETGLSFLGFGIQPPDVSLGTLIADGTASATAFPWVFLFPASILVLILV 266
Query 320 LLIYVGEATRDAFDP 334
G+ RDA DP
Sbjct 267 CANLTGDGLRDALDP 281
>P9WFZ8 Putative peptide transport permease protein MT1319 [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=291
Score = 147 bits (372), Expect = 2e-45
Identities = 85/255 (33%), Positives = 136/255 (53%), Gaps = 6/255 (2%)
Query 83 LIDAKGWSIWPLIPFSYQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLL 142
L+ +++ PL+P+SY + + + PP ++WLGT+ G+D+LA+ L G++ S+L
Sbjct 30 LLFVSAYALPPLLPYSYDDLDFNALL---QPPGTKHWLGTNALGQDLLAQTLRGMQKSML 86
Query 143 FGFALTFFSALLGIFVGAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYW 202
G + S + VGAI GY+GGW D ++++ +P ++ I+ +
Sbjct 87 IGVCVAVISTGIAATVGAISGYFGGWRDRTLMWVVDLLLVVPSFILIAIVTPRTKNSANI 146
Query 203 LFLIMLL--FGWTALVGLVRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLS 260
+FL++LL FGW +VR + R +++RAAR +GV R II H++PN S +
Sbjct 147 MFLVLLLAGFGWMISSRMVRGMTMSLREREFIRAARYMGVSSRRIIVGHVVPNVASILII 206
Query 261 QLPFMLTANITALTALDFLGYGLPPDAASLGELLLQGKNNLTA-PWLAMSGFFTLALVLS 319
+ A I A T L FLG+G+ P SLG L+ G + TA PW+ + L L+L
Sbjct 207 DAALNVAAAILAETGLSFLGFGIQPPDVSLGTLIADGTASATAFPWVFLFPASILVLILV 266
Query 320 LLIYVGEATRDAFDP 334
G+ RDA DP
Sbjct 267 CANLTGDGLRDALDP 281
>P24139 Oligopeptide transport system permease protein OppC [Bacillus
subtilis (strain 168)]
Length=305
Score = 145 bits (367), Expect = 1e-44
Identities = 78/240 (33%), Positives = 124/240 (52%), Gaps = 4/240 (2%)
Query 97 FSYQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGI 156
+ Y T NL + PP+ +W GTDD GRD+ R G R+S+ G A L+G+
Sbjct 66 YDYSTTNL---LNADKPPSKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGV 122
Query 157 FVGAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALV 216
G+I G+ GG D I R+ ++ +P L MV++L+ + ++ + + M + GW +
Sbjct 123 IWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMVVLPKGLFTIIIAMTITGWINMA 182
Query 217 GLVRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTAL 276
+VR + L+ +N +YV A++ LG K ++F+HI+PNAM S L + + I L
Sbjct 183 RIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEAFL 242
Query 277 DFLGYGLPPDAASLGELLLQGKNNLT-APWLAMSGFFTLALVLSLLIYVGEATRDAFDPR 335
+LG G+P AS G + G LT PW + + + VG+ RDA DP+
Sbjct 243 SYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPK 302
>P26904 Dipeptide transport system permease protein DppC [Bacillus
subtilis (strain 168)]
Length=320
Score = 144 bits (364), Expect = 5e-44
Identities = 76/225 (34%), Positives = 122/225 (54%), Gaps = 2/225 (1%)
Query 113 PPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLI 172
PP+A +W GTD+ GRDV R YG R+SL G L+G+ G + GY GG ID I
Sbjct 93 PPSADHWFGTDELGRDVFTRTWYGARISLFVGVMAALIDFLIGVIYGGVAGYKGGRIDSI 152
Query 173 GQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYV 232
R++EV GLP L +V++L+ + P + + + + + GW + +VR + L+ +N +YV
Sbjct 153 MMRIIEVLYGLPYLLVVILLMVLMGPGLGTIIVALTVTGWVGMARIVRGQVLQIKNYEYV 212
Query 233 RAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGE 292
A++ G K II +++LPN M + + Q+ + A I A + L FLG G+ AS G
Sbjct 213 LASKTFGAKTFRIIRKNLLPNTMGAIIVQMTLTVPAAIFAESFLSFLGLGIQAPFASWGV 272
Query 293 LLLQGKNNLTAP--WLAMSGFFTLALVLSLLIYVGEATRDAFDPR 335
+ G + + W F ++L + +G+ +DA DP+
Sbjct 273 MANDGLPTILSGHWWRLFFPAFFISLTMYAFNVLGDGLQDALDPK 317
Score = 22.7 bits (47), Expect = 0.18
Identities = 8/34 (24%), Positives = 20/34 (59%), Gaps = 0/34 (0%)
Query 6 QERIKRFKQNRLGFWCFIIFIIIFVLSLMSELIA 39
Q+ +R K+N+L I + +FV++++ ++
Sbjct 45 QDAWRRLKKNKLAMAGLFILLFLFVMAVIGPFLS 78
>P08006 Oligopeptide transport system permease protein OppC [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=302
Score = 140 bits (354), Expect = 1e-42
Identities = 71/219 (32%), Positives = 120/219 (55%), Gaps = 1/219 (0%)
Query 118 NWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLIGQRLL 177
++ GTD GRD+L R+ G R+SL+ G A + ++G G++ GY GG ID + RLL
Sbjct 82 HYFGTDSSGRDLLVRVAIGGRISLMVGIAAALVAVIVGTLYGSLSGYLGGKIDSVMMRLL 141
Query 178 EVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYVRAARA 237
E+ P +F V++LV+ F N+ +F+ + + W + +VR + L + +++ AA+
Sbjct 142 EILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQV 201
Query 238 LGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGELLLQG 297
GV +I+ RHI+PN + + ++ + I + L FLG G +S G LL G
Sbjct 202 GGVSTASIVIRHIVPNVLGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDG 261
Query 298 KNNL-TAPWLAMSGFFTLALVLSLLIYVGEATRDAFDPR 335
N++ +PWL + L + L ++G+ RDA DP+
Sbjct 262 ANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK 300
>P94312 Dipeptide transport system permease protein DppC [Alkalihalophilus
pseudofirmus (strain ATCC BAA-2126 / JCM 17055
/ OF4)]
Length=304
Score = 139 bits (350), Expect = 4e-42
Identities = 72/223 (32%), Positives = 122/223 (55%), Gaps = 1/223 (0%)
Query 114 PTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLIG 173
P+A++W GTDD GRD+ RI+YG R+SL GF + + G +G I GYYG WID++
Sbjct 79 PSAEHWFGTDDFGRDIFTRIVYGARLSLQVGFFAVTGALIFGTTLGLIAGYYGRWIDMLI 138
Query 174 QRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYVR 233
R+ ++ P + + + +V++ P++ + + + LVR++ + R +++
Sbjct 139 SRIFDIMLAFPSILLAIAIVAILGPSLQNALIAIAIVNVPIFGRLVRSKVISLREEEFIM 198
Query 234 AARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGEL 293
AA+A G+K+ IIF HILPN+++ + Q I AL FLG G G++
Sbjct 199 AAKAQGMKNGRIIFHHILPNSLAPIIVQATLGFGTAILEAAALGFLGLGAQAPMPEWGKM 258
Query 294 LLQGKNNL-TAPWLAMSGFFTLALVLSLLIYVGEATRDAFDPR 335
L + + +APW + F++ LV+ +G+ RDA DP+
Sbjct 259 LSDSRQFIQSAPWTVLFPGFSIMLVVLGFNMIGDGLRDALDPK 301
>P0AFH6 Oligopeptide transport system permease protein OppC [Escherichia
coli (strain K12)]
Length=302
Score = 139 bits (349), Expect = 5e-42
Identities = 74/243 (30%), Positives = 127/243 (52%), Gaps = 2/243 (1%)
Query 94 LIPFSYQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSAL 153
L F+Y + + P + ++ GTD GRD+L R+ G R+SL+ G A + +
Sbjct 59 LSQFAYDDTDWAMMSSAPDMESG-HYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVV 117
Query 154 LGIFVGAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWT 213
+G G++ GY GG +D + RLLE+ P +F V++LV+ F N+ +F+ + + W
Sbjct 118 VGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWL 177
Query 214 ALVGLVRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITAL 273
+ +VR + L + +++ AA+ GV I+ RHI+PN + + ++ + I
Sbjct 178 DMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNVLGVVVVYASLLVPSMILFE 237
Query 274 TALDFLGYGLPPDAASLGELLLQGKNNL-TAPWLAMSGFFTLALVLSLLIYVGEATRDAF 332
+ L FLG G +S G LL G N++ +PWL + L + L ++G+ RDA
Sbjct 238 SFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDAL 297
Query 333 DPR 335
DP+
Sbjct 298 DPK 300
>P0AFH7 Oligopeptide transport system permease protein OppC [Escherichia
coli O157:H7]
Length=302
Score = 139 bits (349), Expect = 5e-42
Identities = 74/243 (30%), Positives = 127/243 (52%), Gaps = 2/243 (1%)
Query 94 LIPFSYQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSAL 153
L F+Y + + P + ++ GTD GRD+L R+ G R+SL+ G A + +
Sbjct 59 LSQFAYDDTDWAMMSSAPDMESG-HYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVV 117
Query 154 LGIFVGAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWT 213
+G G++ GY GG +D + RLLE+ P +F V++LV+ F N+ +F+ + + W
Sbjct 118 VGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWL 177
Query 214 ALVGLVRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITAL 273
+ +VR + L + +++ AA+ GV I+ RHI+PN + + ++ + I
Sbjct 178 DMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNVLGVVVVYASLLVPSMILFE 237
Query 274 TALDFLGYGLPPDAASLGELLLQGKNNL-TAPWLAMSGFFTLALVLSLLIYVGEATRDAF 332
+ L FLG G +S G LL G N++ +PWL + L + L ++G+ RDA
Sbjct 238 SFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDAL 297
Query 333 DPR 335
DP+
Sbjct 298 DPK 300
>Q8FWN9 Putative peptide permease protein BRA0407/BS1330_II0404
[Brucella suis biovar 1 (strain 1330)]
Length=302
Score = 135 bits (341), Expect = 8e-41
Identities = 76/240 (32%), Positives = 124/240 (52%), Gaps = 4/240 (2%)
Query 99 YQTPNLDLAVPVPSPPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFV 158
Y+ ++DL + + S P+ ++W GTD GRDV AR + G R+SLL + S +G +
Sbjct 60 YKPNDIDL-MAMNSAPSWKHWFGTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLI 118
Query 159 GAIQGYYGGWIDLIGQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGL 218
GAI G W D I R +++ LP + +++L S+ ++ +++ L W L +
Sbjct 119 GAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLSWPVLSRM 178
Query 219 VRAEFLRARNLDYVRAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDF 278
+RA L R ++V A+R +G ++FRH LPN++ + + I L F
Sbjct 179 IRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSF 238
Query 279 LGYGLPPDAASLGELLLQGKNNLTA---PWLAMSGFFTLALVLSLLIYVGEATRDAFDPR 335
LG G+PP AAS G +L ++ PW + L L + + ++G+ RDAFDPR
Sbjct 239 LGLGVPPPAASWGNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPR 298
>P51000 Dipeptide transport system permease protein DppC [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=295
Score = 133 bits (334), Expect = 7e-40
Identities = 76/218 (35%), Positives = 122/218 (56%), Gaps = 3/218 (1%)
Query 120 LGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLIGQRLLEV 179
LGTDD GRD+L+RI+YG R+S+ GF + S G +G I GYYGG +D I RL+++
Sbjct 76 LGTDDIGRDILSRIIYGTRISVFAGFIIVLLSCAFGTSLGLISGYYGGVLDTIIIRLIDI 135
Query 180 WGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYVRAARALG 239
+P L + +++VS+ P++ L + + + V L RA + +N DYV +++ G
Sbjct 136 MLAIPNLLLTIVVVSILEPSLANATLAIAVVSIPSYVRLTRAAMMNEKNRDYVTSSKVAG 195
Query 240 VKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGELLLQGKN 299
++F ILPN ++ + Q+ ++ I L L FLG G P LG +L + +
Sbjct 196 AGILRLMFIVILPNCLAPLIVQMTMGISNAILELATLGFLGIGAKPPTPELGTMLSEARG 255
Query 300 NL-TAPWL-AMSGFFTLALVLSLLIYVGEATRDAFDPR 335
+ A WL + G L+LVL+ + +G+ RDA DP+
Sbjct 256 FMQAANWLVTIPGLVILSLVLAFNL-MGDGLRDALDPK 292
Score = 23.1 bits (48), Expect = 0.13
Identities = 13/39 (33%), Positives = 21/39 (54%), Gaps = 0/39 (0%)
Query 5 MQERIKRFKQNRLGFWCFIIFIIIFVLSLMSELIANDKP 43
+QE FKQNR I +I+ ++S+++ IA P
Sbjct 14 LQEFWFYFKQNRGALIGLIFILIVALISILAPYIAPFDP 52
>P0A4N9 Oligopeptide transport system permease protein OppC [Lactococcus
lactis subsp. lactis (strain IL1403)]
Length=294
Score = 131 bits (329), Expect = 4e-39
Identities = 74/229 (32%), Positives = 119/229 (52%), Gaps = 4/229 (2%)
Query 112 SPPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDL 171
+P T + LGTD+ GRD++ ++ R S FA+T + ++G +G I GY+GG DL
Sbjct 63 APLTNGHLLGTDNGGRDIIMMLMISARNSFNIAFAVTLITLVVGNILGVITGYFGGRFDL 122
Query 172 IGQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFL-IMLLFGWTALVGLVRAEFLRARNLD 230
I R + LP + ++++ V++ W + I+ +F W L+RA + N D
Sbjct 123 IFMRFTDFVMILPSMMIIIVFVTIIPRFNSWSLIGIISIFSWIGTTRLIRARTMTEVNRD 182
Query 231 YVRAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASL 290
YVRA++ G D I+FR I PN + +++ + NI T L FLG+GLP SL
Sbjct 183 YVRASKTSGTSDFKIMFREIWPNLSTLVIAEATLVFAGNIGLETGLSFLGFGLPAGTPSL 242
Query 291 GELLLQGKNNLT---APWLAMSGFFTLALVLSLLIYVGEATRDAFDPRQ 336
G ++ + N T PW + + +V+ +I++G A R D RQ
Sbjct 243 GTMINEATNPETMTDKPWTWVPATVVILIVVLAIIFIGNALRRVADQRQ 291
>P0A4P0 Oligopeptide transport system permease protein OppC [Lactococcus
lactis subsp. cremoris (strain SK11)]
Length=294
Score = 130 bits (327), Expect = 7e-39
Identities = 73/229 (32%), Positives = 119/229 (52%), Gaps = 4/229 (2%)
Query 112 SPPTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDL 171
+P T + LGTD+ GRD++ ++ R S FA+T + ++G +G I GY+GG DL
Sbjct 63 APLTTGHLLGTDNGGRDIIMMLMISARNSFNIAFAVTLITLVVGNILGVITGYFGGRFDL 122
Query 172 IGQRLLEVWGGLPMLFMVMILVSMFTPNVYWLFL-IMLLFGWTALVGLVRAEFLRARNLD 230
I R + LP + ++++ V++ W + I+ +F W L+RA + N D
Sbjct 123 IFMRFTDFVMILPSMMIIIVFVTIIPRFNSWSLIGIISIFSWIGTTRLIRARTMTEVNRD 182
Query 231 YVRAARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASL 290
YV+A++ G D I+FR I PN + +++ + NI T L FLG+GLP SL
Sbjct 183 YVQASKTSGTSDFKIMFREIWPNLSTLVIAEATLVFAGNIGLETGLSFLGFGLPAGTPSL 242
Query 291 GELLLQGKNNLT---APWLAMSGFFTLALVLSLLIYVGEATRDAFDPRQ 336
G ++ + N T PW + + +V+ +I++G A R D RQ
Sbjct 243 GTMINEATNPETMTDKPWTWVPATVVILIVVLAIIFIGNALRRVADQRQ 291
>P75799 Glutathione transport system permease protein GsiD [Escherichia
coli (strain K12)]
Length=303
Score = 129 bits (324), Expect = 2e-38
Identities = 69/225 (31%), Positives = 121/225 (54%), Gaps = 5/225 (2%)
Query 114 PTAQNWLGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLIG 173
P+ Q+W G D GRD+ +R+L G ++SL G F A +G +G + GYY GW D +
Sbjct 78 PSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLI 137
Query 174 QRLLEVWGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYVR 233
R+ +V P + + + +V++ + + + + +F A LVR L + ++
Sbjct 138 MRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIE 197
Query 234 AARALGVKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGEL 293
+AR++G D T++ RHILP +SS + + +I + +L FLG G P G +
Sbjct 198 SARSIGASDMTVLLRHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAM 257
Query 294 LLQGKNNLT-APWLAMSGFFTLALVLSLLIY--VGEATRDAFDPR 335
L + + ++ AP +A+ F LA+ L++L + +G+ RDA DP+
Sbjct 258 LNEARADMVIAPHVAV--FPALAIFLTVLAFNLLGDGLRDALDPK 300
>P0AEG1 Dipeptide transport system permease protein DppC [Escherichia
coli (strain K12)]
Length=300
Score = 128 bits (322), Expect = 4e-38
Identities = 76/218 (35%), Positives = 119/218 (55%), Gaps = 3/218 (1%)
Query 120 LGTDDQGRDVLARILYGLRVSLLFGFALTFFSALLGIFVGAIQGYYGGWIDLIGQRLLEV 179
LGTDD GRDVL+R++YG R+SLL G + S ++G+ +G I GY+GG +D I R++++
Sbjct 81 LGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDI 140
Query 180 WGGLPMLFMVMILVSMFTPNVYWLFLIMLLFGWTALVGLVRAEFLRARNLDYVRAARALG 239
LP L + ++LV++F P++ L + V L RA L N DYV A+R G
Sbjct 141 MLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAG 200
Query 240 VKDRTIIFRHILPNAMSSSLSQLPFMLTANITALTALDFLGYGLPPDAASLGELLLQGKN 299
+F +I PN ++ + Q + I + AL FLG G P G +L
Sbjct 201 AGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQ 260
Query 300 NLTAPWLAMSGFFTLALVLSLLIY--VGEATRDAFDPR 335
+ W ++ F LA++L++L + +G+ RDA DP+
Sbjct 261 FAQSAWWVVT-FPGLAILLTVLAFNLMGDGLRDALDPK 297
Score = 19.6 bits (39), Expect = 1.7
Identities = 12/43 (28%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query 1 MSPLMQERIKRFKQNRLGFWCFIIFIIIFVLSLMSELIANDKP 43
M+PL QE FK+N+ + +I+ +++ + IA P
Sbjct 16 MTPL-QEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNP 57
Lambda K H a alpha
0.330 0.145 0.457 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1335450
Database: a4abb19eb6a6218f421bf706ec215064.SwissProt.fasta
Posted date: May 9, 2024 8:56 AM
Number of letters in database: 5,451
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
