BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: ff6454735219d029a079da3c12e20139.SwissProt.fasta
           1 sequences; 772 total letters



Query= ACIAD1179

Length=302
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q8L831 Nudix hydrolase 3 [Arabidopsis thaliana]                       35.4    3e-06


>Q8L831 Nudix hydrolase 3 [Arabidopsis thaliana]
Length=772

 Score = 35.4 bits (80),  Expect = 3e-06
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (6%)

Query  68   DQLNSPGYKRIIKQGIKPGILLPNEYFRFKTYWKIKNAVYEGAIPVALFESDHPYYFGAK  127
            D ++SP  K+++    K    L NEY+     W   ++  +  I +  +E+     FG K
Sbjct  411  DLVSSPSLKKLLHS--KAEAFLSNEYYESDIAWMDLDSKLD--ITIGPYETYEDEIFGYK  466

Query  128  ATFSTAIGLR  137
            ATF T IG+R
Sbjct  467  ATFETFIGIR  476


 Score = 16.2 bits (30),  Expect = 2.7
 Identities = 5/8 (63%), Positives = 5/8 (63%), Gaps = 0/8 (0%)

Query  45  WPSSQDIS  52
           WP   DIS
Sbjct  59  WPGQWDIS  66


 Score = 14.6 bits (26),  Expect = 8.3
 Identities = 6/21 (29%), Positives = 11/21 (52%), Gaps = 0/21 (0%)

Query  71   NSPGYKRIIKQGIKPGILLPN  91
            N P  ++I+K      ++L N
Sbjct  535  NLPNDEKIVKDRGTSMVMLKN  555



Lambda      K        H        a         alpha
   0.324    0.141    0.446    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 197784


  Database: ff6454735219d029a079da3c12e20139.SwissProt.fasta
    Posted date:  May 9, 2024  2:24 AM
  Number of letters in database: 772
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40