BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 9db25e56d7443ea9f184ce623858e669.SwissProt.fasta
           2 sequences; 888 total letters



Query= ACIAD1186

Length=568
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O80885 Membrane metalloprotease ARASP, chloroplastic [Arabidopsis...  39.7    3e-07
O23053 Probable membrane metalloprotease ARASP2, chloroplastic [A...  38.1    9e-07


>O80885 Membrane metalloprotease ARASP, chloroplastic [Arabidopsis 
thaliana]
Length=447

 Score = 39.7 bits (91),  Expect = 3e-07
 Identities = 26/89 (29%), Positives = 47/89 (53%), Gaps = 3/89 (3%)

Query  459  SYALKHDKKMPFGMKLQDKPEGVMVQQVNRYGAAATAGLSAQDVIIAIDGLKASEKLLAT  518
            +YA+   + +  G+ +Q+   GV+V +V  + AA+  GL + DVI+A+DG + S+     
Sbjct  191  AYAIIFVQVLSVGLPVQEAFPGVLVPEVKTFSAASRDGLLSGDVILAVDGTELSKTGPDA  250

Query  519  YAKQQGIITILAFRRDELMSFEVERSTID  547
             +K   I+ I+       + F +ER   D
Sbjct  251  VSK---IVDIVKRNPKSNVVFRIERGGED  276


>O23053 Probable membrane metalloprotease ARASP2, chloroplastic 
[Arabidopsis thaliana]
Length=441

 Score = 38.1 bits (87),  Expect = 9e-07
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 0/54 (0%)

Query  459  SYALKHDKKMPFGMKLQDKPEGVMVQQVNRYGAAATAGLSAQDVIIAIDGLKAS  512
            +YA+   + +  G+ +Q+   GV+V  V  + AA+  GL   DVI+A+DG + S
Sbjct  185  AYAIIFTQVVSVGLPVQESFPGVLVPDVKSFSAASRDGLLPGDVILAVDGTELS  238


 Score = 18.1 bits (35),  Expect = 1.5
 Identities = 7/26 (27%), Positives = 13/26 (50%), Gaps = 0/26 (0%)

Query  291  ARYNLNQESYTSLLWIFEGFTSYYDD  316
            A++N N   Y+   +   GF  + D+
Sbjct  123  AKFNSNNVEYSLRAFPLGGFVGFPDN  148



Lambda      K        H        a         alpha
   0.321    0.137    0.406    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 428490


  Database: 9db25e56d7443ea9f184ce623858e669.SwissProt.fasta
    Posted date:  May 20, 2024  3:35 AM
  Number of letters in database: 888
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40