Comparative Genomics

ACIAD1205 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: dd4c25f8fd75768336cc582b129b473a.SwissProt.fasta
           27 sequences; 4,570 total letters



Query= ACIAD1205

Length=170
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FCX7 DNA protection during starvation protein [Acinetobacter ba...  332     4e-122
Q8FJM0 DNA protection during starvation protein [Escherichia coli...  206     2e-72 
A4W8F0 DNA protection during starvation protein [Enterobacter sp....  206     3e-72 
C6DEE2 DNA protection during starvation protein [Pectobacterium c...  206     3e-72 
Q6D3H7 DNA protection during starvation protein [Pectobacterium a...  206     3e-72 
B7UM08 DNA protection during starvation protein [Escherichia coli...  205     6e-72 
A7ZJM7 DNA protection during starvation protein [Escherichia coli...  205     6e-72 
Q6XZR0 DNA protection during starvation protein [Kluyvera cryocre...  205     6e-72 
P0ABT2 DNA protection during starvation protein [Escherichia coli...  205     6e-72 
P0ABT3 DNA protection during starvation protein [Escherichia coli...  205     6e-72 
Q84FI1 DNA protection during starvation protein [Enterobacter clo...  203     4e-71 
Q6Y1R6 DNA protection during starvation protein [Proteus hauseri]     203     4e-71 
A1JU34 DNA protection during starvation protein [Yersinia enteroc...  203     4e-71 
B5QXT6 DNA protection during starvation protein [Salmonella enter...  201     1e-70 
B5FP96 DNA protection during starvation protein [Salmonella dubli...  201     1e-70 
Q57RC9 DNA protection during starvation protein [Salmonella chole...  201     1e-70 
B5F0B0 DNA protection during starvation protein [Salmonella agona...  201     1e-70 
A8AIW9 DNA protection during starvation protein [Citrobacter kose...  201     1e-70 
A7MEY6 DNA protection during starvation protein [Cronobacter saka...  200     4e-70 
Q84FI0 DNA protection during starvation protein [Klebsiella pneum...  198     3e-69 
Q84AP1 DNA protection during starvation protein [Citrobacter freu...  198     3e-69 
Q84AP0 DNA protection during starvation protein [Serratia marcesc...  193     3e-67 
Q8UCK6 DNA protection during starvation protein [Agrobacterium fa...  172     3e-59 
Q9KWH3 DNA protection during starvation protein [Streptococcus mu...  84.3    2e-24 
Q47953 Fine tangled pili major subunit [Haemophilus ducreyi (stra...  83.6    5e-24 
P0C558 DNA protection during starvation protein [Mycolicibacteriu...  82.0    2e-23 
A0R692 DNA protection during starvation protein [Mycolicibacteriu...  82.0    2e-23 


>Q6FCX7 DNA protection during starvation protein [Acinetobacter 
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=169

 Score = 332 bits (851),  Expect = 4e-122
 Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%)

Query  1    MSKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHE  60
            MSKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHE
Sbjct  1    MSKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHE  60

Query  61   MLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADR  120
            MLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADR
Sbjct  61   MLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADR  120

Query  121  YGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIEQDKTTA  169
            YGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIEQDKTTA
Sbjct  121  YGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIEQDKTTA  169


>Q8FJM0 DNA protection during starvation protein [Escherichia 
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=167

 Score = 206 bits (525),  Expect = 2e-72
 Identities = 100/166 (60%), Positives = 134/166 (81%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+LI HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I+E +D  + DI+ AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIDEAKDDDTADILTAASRDLDKFLWFIESNIE  167


>A4W8F0 DNA protection during starvation protein [Enterobacter 
sp. (strain 638)]
Length=167

 Score = 206 bits (523),  Expect = 3e-72
 Identities = 99/166 (60%), Positives = 134/166 (81%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++T+++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKTKASNLLYTRNDVSDSDKKATIELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L+THLD +AERAVQ+GG ALGTTQ +++ + L +YP++IH+VQDHLKEL
Sbjct  62   VHEMLDGFRTALVTHLDTMAERAVQLGGVALGTTQVINSKTALKSYPLDIHSVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I E +D  + DI+ AA  DLDQ+LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIGEAKDEDTADILTAASRDLDQFLWFIESNIE  167


>C6DEE2 DNA protection during starvation protein [Pectobacterium 
carotovorum subsp. carotovorum (strain PC1)]
Length=167

 Score = 206 bits (523),  Expect = 3e-72
 Identities = 101/166 (61%), Positives = 128/166 (77%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN+LD +VK ST+ +LNQ++ + IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSAPSALLYTRNDLDDSVKTSTIALLNQLVVDFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRTS+I H D +AER VQIGG ALGT Q V   + L +YP  IH+VQDHLK L
Sbjct  62   VHEMLDGFRTSIIDHQDTIAERVVQIGGVALGTVQIVGKQTSLKSYPTNIHSVQDHLKAL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            A+RY IVAN++R  I + +D  S DI+ AA  DLDQ+LWF+E+NIE
Sbjct  122  AERYAIVANNVRKAIGKTEDEASADILTAASRDLDQFLWFIESNIE  167


>Q6D3H7 DNA protection during starvation protein [Pectobacterium 
atrosepticum (strain SCRI 1043 / ATCC BAA-672)]
Length=167

 Score = 206 bits (523),  Expect = 3e-72
 Identities = 101/166 (61%), Positives = 128/166 (77%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN+LD +VK ST+ +LNQ++ + IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSAPSELLYTRNDLDDSVKTSTIALLNQLVVDFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRTS+I H D +AER VQIGG ALGT Q V   + L +YP  IH+VQDHLK L
Sbjct  62   VHEMLDGFRTSIIDHQDTIAERVVQIGGVALGTVQIVGKQTSLKSYPTTIHSVQDHLKAL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            A+RY IVAN++R  I + +D  S DI+ AA  DLDQ+LWF+E+NIE
Sbjct  122  AERYAIVANNVRQAIGKTEDEASADILTAASRDLDQFLWFIESNIE  167


>B7UM08 DNA protection during starvation protein [Escherichia 
coli O127:H6 (strain E2348/69 / EPEC)]
Length=167

 Score = 205 bits (521),  Expect = 6e-72
 Identities = 100/166 (60%), Positives = 133/166 (80%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+LI HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I E +D  + DI+ AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE  167


>A7ZJM7 DNA protection during starvation protein [Escherichia 
coli O139:H28 (strain E24377A / ETEC)]
Length=167

 Score = 205 bits (521),  Expect = 6e-72
 Identities = 100/166 (60%), Positives = 133/166 (80%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+LI HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I E +D  + DI+ AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE  167


>Q6XZR0 DNA protection during starvation protein [Kluyvera cryocrescens]
Length=167

 Score = 205 bits (521),  Expect = 6e-72
 Identities = 100/166 (60%), Positives = 133/166 (80%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+LI HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I E +D  + DI+ AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE  167


>P0ABT2 DNA protection during starvation protein [Escherichia 
coli (strain K12)]
Length=167

 Score = 205 bits (521),  Expect = 6e-72
 Identities = 100/166 (60%), Positives = 133/166 (80%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+LI HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I E +D  + DI+ AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE  167


>P0ABT3 DNA protection during starvation protein [Escherichia 
coli O157:H7]
Length=167

 Score = 205 bits (521),  Expect = 6e-72
 Identities = 100/166 (60%), Positives = 133/166 (80%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+LI HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I E +D  + DI+ AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE  167


>Q84FI1 DNA protection during starvation protein [Enterobacter 
cloacae]
Length=167

 Score = 203 bits (516),  Expect = 4e-71
 Identities = 98/166 (59%), Positives = 132/166 (80%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++T+++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSDKKATIELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L+THLD +AERAVQ+GG ALGTTQ +++ + L +YP++IH VQDHLKEL
Sbjct  62   VHEMLDGFRTALVTHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHTVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY IVAN +R  I E +D  + DI  AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAIVANDVRKAIGEAKDEDTADIFTAASRDLDKFLWFIESNIE  167


>Q6Y1R6 DNA protection during starvation protein [Proteus hauseri]
Length=167

 Score = 203 bits (516),  Expect = 4e-71
 Identities = 99/165 (60%), Positives = 132/165 (80%), Gaps = 6/165 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+LI HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANI  162
            ADRY IVAN +R  I E +D  + DI+ AA  DLD++LWF+E+NI
Sbjct  122  ADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNI  166


>A1JU34 DNA protection during starvation protein [Yersinia enterocolitica 
serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)]
Length=169

 Score = 203 bits (516),  Expect = 4e-71
 Identities = 99/166 (60%), Positives = 127/166 (77%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++D   K  T+K+LN+++   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKAKSSELIYTRNDVDEHTKTLTIKLLNELVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT++  HLD  AERAVQ+GG ALGT Q V+  + L +YP  IH+VQDHLKEL
Sbjct  62   VHEMLDGFRTTINDHLDTFAERAVQLGGIALGTAQLVTEKTPLESYPTRIHSVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRYG+VAN +R  I E++D  S D+  AA  DLD++LWFLEAN+E
Sbjct  122  ADRYGVVANFVRKAITEVKDEDSADMFTAASRDLDKFLWFLEANLE  167


>B5QXT6 DNA protection during starvation protein [Salmonella enteritidis 
PT4 (strain P125109)]
Length=167

 Score = 201 bits (512),  Expect = 1e-70
 Identities = 98/166 (59%), Positives = 131/166 (79%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKTKASNLLYTRNDVSESDKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L  HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY +VAN +R  I E +D  + DI  AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAVVANDVRKAIGEAKDEDTADIFTAASRDLDKFLWFIESNIE  167


>B5FP96 DNA protection during starvation protein [Salmonella dublin 
(strain CT_02021853)]
Length=167

 Score = 201 bits (512),  Expect = 1e-70
 Identities = 98/166 (59%), Positives = 131/166 (79%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKTKASNLLYTRNDVSESDKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L  HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY +VAN +R  I E +D  + DI  AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAVVANDVRKAIGEAKDEDTADIFTAASRDLDKFLWFIESNIE  167


>Q57RC9 DNA protection during starvation protein [Salmonella choleraesuis 
(strain SC-B67)]
Length=167

 Score = 201 bits (512),  Expect = 1e-70
 Identities = 98/166 (59%), Positives = 131/166 (79%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKTKASNLLYTRNDVSESDKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L  HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY +VAN +R  I E +D  + DI  AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAVVANDVRKAIGEAKDEDTADIFTAASRDLDKFLWFIESNIE  167


>B5F0B0 DNA protection during starvation protein [Salmonella agona 
(strain SL483)]
Length=167

 Score = 201 bits (512),  Expect = 1e-70
 Identities = 98/166 (59%), Positives = 131/166 (79%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKTKASNLLYTRNDVSESDKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L  HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKEL
Sbjct  62   VHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY +VAN +R  I E +D  + DI  AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAVVANDVRKAIGEAKDEDTADIFTAASRDLDKFLWFIESNIE  167


>A8AIW9 DNA protection during starvation protein [Citrobacter 
koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)]
Length=167

 Score = 201 bits (512),  Expect = 1e-70
 Identities = 98/166 (59%), Positives = 131/166 (79%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++TV++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKTKASNLLYTRNDVSDSDKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L  HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IH+VQDHLKEL
Sbjct  62   VHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHSVQDHLKEL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY +VAN +R  I E +D  + DI  AA  DLD++LWF+EANIE
Sbjct  122  ADRYSVVANDVRKAISEAKDEDTADIFTAASRDLDKFLWFIEANIE  167


>A7MEY6 DNA protection during starvation protein [Cronobacter 
sakazakii (strain ATCC BAA-894)]
Length=167

 Score = 200 bits (509),  Expect = 4e-70
 Identities = 93/153 (61%), Positives = 124/153 (81%), Gaps = 0/153 (0%)

Query  11   VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLI  70
            +YTRN++  + K++T+++LN+ + N IDLSL+TKQAHWNMRG+NFI VHEMLD FRT+L 
Sbjct  15   LYTRNDVADSDKKATIELLNRQVVNFIDLSLITKQAHWNMRGANFIGVHEMLDGFRTALT  74

Query  71   THLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRYGIVANHLRD  130
             H+D +AERAVQ+GG ALGTTQ +++ + L +YP++IH+VQDHLKELADRY IVAN +R 
Sbjct  75   GHMDTIAERAVQLGGVALGTTQVINSKTPLKSYPLDIHSVQDHLKELADRYAIVANDVRK  134

Query  131  TIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
             I E QD  + DI  AA  DLD++LWF+E+NIE
Sbjct  135  AISEAQDEDTADIFTAASRDLDKFLWFIESNIE  167


>Q84FI0 DNA protection during starvation protein [Klebsiella pneumoniae]
Length=167

 Score = 198 bits (503),  Expect = 3e-69
 Identities = 95/166 (57%), Positives = 131/166 (79%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN++  + K++T+++LN+ +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKSKATNLLYTRNDVADSEKKATIELLNRQVIQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT+L  HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IH+VQDHLK L
Sbjct  62   VHEMLDGFRTALTEHLDTMAERAVQLGGVALGTTQVINSKTPLQSYPLDIHHVQDHLKAL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRY +VAN +R  I+E +D  + DI  AA  DLD++LWF+E+NIE
Sbjct  122  ADRYAVVANDVRKAIDEAKDEDTADIFTAASRDLDKFLWFIESNIE  167


>Q84AP1 DNA protection during starvation protein [Citrobacter 
freundii]
Length=167

 Score = 198 bits (503),  Expect = 3e-69
 Identities = 96/162 (59%), Positives = 127/162 (78%), Gaps = 3/162 (2%)

Query  2    SKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEM  61
            SK+S+ L   YTRN++  + K++TV++LNQ +   IDLSL+TKQAHWNMRG+NFIAVHEM
Sbjct  9    SKASALL---YTRNDVSDSEKKATVELLNQQVIQFIDLSLITKQAHWNMRGANFIAVHEM  65

Query  62   LDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRY  121
            LD FRT+L  HLD +AERAVQ+GG ALGTTQ +++ + L +YP++IHNVQDHLKELA+RY
Sbjct  66   LDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELAERY  125

Query  122  GIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
             +VAN +R  I E +D  + DI  AA  DLD++LWF+E+  E
Sbjct  126  AVVANSVRKAISEAKDEDTADIFTAASRDLDKFLWFIESTFE  167


>Q84AP0 DNA protection during starvation protein [Serratia marcescens]
Length=167

 Score = 193 bits (490),  Expect = 3e-67
 Identities = 95/166 (57%), Positives = 122/166 (73%), Gaps = 6/166 (4%)

Query  4    SSSKLLK------VYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIA  57
            S++KL+K      +YTRN+LD  VK + +K LN  +   IDLSL+TKQAHWNMRG+NFIA
Sbjct  2    STAKLVKTKSSDLLYTRNDLDEKVKLAAIKALNHQVVQFIDLSLITKQAHWNMRGANFIA  61

Query  58   VHEMLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKEL  117
            VHEMLD FRT++I H D  AER VQ+GG ALGT Q V+  + L +YP  IH+VQ+HLK L
Sbjct  62   VHEMLDGFRTAIIEHQDTFAERVVQLGGVALGTVQVVNDRTPLKSYPTNIHSVQEHLKAL  121

Query  118  ADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
            ADRYG VAN +R  I E++D  + D+  AA  DLD++LWF+E+NIE
Sbjct  122  ADRYGAVANDIRKAITEVEDEDTADMFTAASRDLDKFLWFIESNIE  167


>Q8UCK6 DNA protection during starvation protein [Agrobacterium 
fabrum (strain C58 / ATCC 33970)]
Length=162

 Score = 172 bits (437),  Expect = 3e-59
 Identities = 84/155 (54%), Positives = 114/155 (74%), Gaps = 3/155 (2%)

Query  13   TRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLITH  72
            T+N+L    K + + ILN+ LA++IDL+L+TKQAHWN++G  FIAVHE+LDTFRT L  H
Sbjct  6    TKNDLPSNAKSTVIGILNESLASVIDLALVTKQAHWNLKGPQFIAVHELLDTFRTQLDNH  65

Query  73   LDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRYGIVANHLR---  129
             D +AER VQ+GGTALG+ Q VS+T++L AYP +I+ + DHL  L +RYG VAN +R   
Sbjct  66   GDTIAERVVQLGGTALGSLQAVSSTTKLKAYPTDIYKIHDHLDALIERYGEVANMIRKAI  125

Query  130  DTIEEIQDPISEDIIHAALEDLDQYLWFLEANIEQ  164
            D  +E  DP + DI  AA  DLD+ LWFLEA++++
Sbjct  126  DDSDEAGDPTTADIFTAASRDLDKSLWFLEAHVQE  160


>Q9KWH3 DNA protection during starvation protein [Streptococcus 
mutans]
Length=175

 Score = 84.3 bits (207),  Expect = 2e-24
 Identities = 47/146 (32%), Positives = 74/146 (51%), Gaps = 4/146 (3%)

Query  23   ESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLITHLDNVAERAVQ  82
            E T  +LNQ +A+L   + +  Q HW MRGS F+ +H  +D    +L  HLD ++ER + 
Sbjct  26   EKTKAVLNQAVADLSKAASIVHQVHWYMRGSGFLYLHPKMDELMDALNGHLDEISERLIT  85

Query  83   IGGTALGTTQTVSTTSQL-SAYPVEIHNVQDHLKELADRYGIVANHLR---DTIEEIQDP  138
            IGG    T +     S+L         ++ DHLK L   Y  +++  +   D  +E  D 
Sbjct  86   IGGAPFSTLKEFDENSRLEETVGTWDKSITDHLKRLVQVYDYLSSLYQVGLDVTDEEDDA  145

Query  139  ISEDIIHAALEDLDQYLWFLEANIEQ  164
            +S DI  AA  +  + +W L+A + Q
Sbjct  146  VSNDIFTAAQTEAQKTIWMLQAELGQ  171


>Q47953 Fine tangled pili major subunit [Haemophilus ducreyi (strain 
35000HP / ATCC 700724)]
Length=189

 Score = 83.6 bits (205),  Expect = 5e-24
 Identities = 52/154 (34%), Positives = 78/154 (51%), Gaps = 2/154 (1%)

Query  12   YTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLIT  71
            +T   L  A      + L   L  L +L+L+ K AHWN+ G  FIAVHEMLD+    +  
Sbjct  30   HTVPGLTVATGHLIAEALQMRLQGLNELALILKHAHWNVVGPQFIAVHEMLDSQVDEVRD  89

Query  72   HLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLK--ELADRYGIVANHLR  129
             +D +AER   +G    G +  +  T Q   YP+     QDHLK  +L   + I A+ + 
Sbjct  90   FIDEIAERMATLGVAPNGLSGNLVETRQSPEYPLGRATAQDHLKLIDLYYSHNIEAHRVV  149

Query  130  DTIEEIQDPISEDIIHAALEDLDQYLWFLEANIE  163
                   DPISED++ A    L++  WF+ A+++
Sbjct  150  LEHNGHLDPISEDLLVAQTRSLEKLQWFIRAHLD  183


 Score = 16.2 bits (30),  Expect = 7.4
 Identities = 7/24 (29%), Positives = 10/24 (42%), Gaps = 0/24 (0%)

Query  90   TTQTVSTTSQLSAYPVEIHNVQDH  113
            T   +  T Q  A   ++H   DH
Sbjct  7    TFPVLKLTGQSQALTNDMHKNADH  30


>P0C558 DNA protection during starvation protein [Mycolicibacterium 
smegmatis]
Length=183

 Score = 82.0 bits (201),  Expect = 2e-23
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 2/154 (1%)

Query  12   YTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLIT  71
            +T   L          +L + L+   DL L  K  HWN+ G NFI VHEM+D     +  
Sbjct  4    FTIPGLSDKKASDVADLLQKQLSTYNDLHLTLKHVHWNVVGPNFIGVHEMIDPQVELVRG  63

Query  72   HLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRYGIVANHLRDT  131
            + D VAER   +G +  GT   +        Y VE   VQ HL  L   Y  V    R +
Sbjct  64   YADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVERDTVQAHLAALDLVYNGVIEDTRKS  123

Query  132  IEEIQ--DPISEDIIHAALEDLDQYLWFLEANIE  163
            IE+++  D +S+D++ A   +L+++ WF+ A++E
Sbjct  124  IEKLEDLDLVSQDLLIAHAGELEKFQWFVRAHLE  157


>A0R692 DNA protection during starvation protein [Mycolicibacterium 
smegmatis (strain ATCC 700084 / mc(2)155)]
Length=183

 Score = 82.0 bits (201),  Expect = 2e-23
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 2/154 (1%)

Query  12   YTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLIT  71
            +T   L          +L + L+   DL L  K  HWN+ G NFI VHEM+D     +  
Sbjct  4    FTIPGLSDKKASDVADLLQKQLSTYNDLHLTLKHVHWNVVGPNFIGVHEMIDPQVELVRG  63

Query  72   HLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRYGIVANHLRDT  131
            + D VAER   +G +  GT   +        Y VE   VQ HL  L   Y  V    R +
Sbjct  64   YADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVERDTVQAHLAALDLVYNGVIEDTRKS  123

Query  132  IEEIQ--DPISEDIIHAALEDLDQYLWFLEANIE  163
            IE+++  D +S+D++ A   +L+++ WF+ A++E
Sbjct  124  IEKLEDLDLVSQDLLIAHAGELEKFQWFVRAHLE  157



Lambda      K        H        a         alpha
   0.319    0.132    0.369    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 460727


  Database: dd4c25f8fd75768336cc582b129b473a.SwissProt.fasta
    Posted date:  May 31, 2024  10:40 AM
  Number of letters in database: 4,570
  Number of sequences in database:  27



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40