Comparative Genomics

ACIAD1344 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 99af96efd6f1811a4d7da2e2e5d8872a.SwissProt.fasta
           19 sequences; 3,017 total letters



Query= ACIAD1344

Length=164
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P45265 Leucine-responsive regulatory protein [Haemophilus influen...  91.3    2e-27
P37424 Leucine-responsive regulatory protein [Klebsiella pneumoniae]  89.4    1e-26
P37425 Leucine-responsive regulatory protein [Serratia marcescens]    89.0    1e-26
P0ACJ1 Leucine-responsive regulatory protein [Escherichia coli O6...  89.0    1e-26
P0ACJ2 Leucine-responsive regulatory protein [Escherichia coli O1...  89.0    1e-26
P0ACJ4 Leucine-responsive regulatory protein [Klebsiella aerogenes]   89.0    1e-26
P0ACJ0 Leucine-responsive regulatory protein [Escherichia coli (s...  89.0    1e-26
P0A2S0 Leucine-responsive regulatory protein [Salmonella typhimur...  88.6    2e-26
Q44333 Proline dehydrogenase transcriptional activator [Rhizobium...  87.0    7e-26
P55658 Uncharacterized HTH-type transcriptional regulator y4tD [S...  81.6    1e-23
P56901 Leucine-responsive regulatory protein [Rhizobium meliloti ...  80.5    2e-23
O07920 Transcriptional regulator AzlB [Bacillus subtilis (strain ...  79.0    9e-23
P0ACJ6 DNA-binding transcriptional activator DecR [Escherichia co...  77.8    2e-22
P0ACJ7 DNA-binding transcriptional activator DecR [Escherichia co...  77.8    2e-22
P0ACJ5 DNA-binding transcriptional activator DecR [Escherichia co...  77.8    2e-22
P0DJA5 Glutamate uptake regulatory protein [Zymomonas mobilis sub...  74.3    6e-21
F8DT92 Glutamate uptake regulatory protein [Zymomonas mobilis sub...  74.3    6e-21
Q52710 Proline dehydrogenase transcriptional activator [Rhodobact...  69.3    4e-19
P50337 Uncharacterized HTH-type transcriptional regulator y4sM [S...  68.6    4e-19


>P45265 Leucine-responsive regulatory protein [Haemophilus influenzae 
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=166

 Score = 91.3 bits (225),  Expect = 2e-27
 Identities = 47/149 (32%), Positives = 88/149 (59%), Gaps = 0/149 (0%)

Query  2    SQGLDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQ  61
            ++ LD  D KIL  LQ NG++SN +LS+ +GLS + C  R   LE++G+I+GY A ++P+
Sbjct  13   NKALDAIDIKILNELQRNGKISNIDLSKKVGLSPTPCLERVKRLEKQGVIMGYRALLNPE  72

Query  62   AEKQPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMS  121
                P++ ++EI L     +  E+F   ++    I+E + ++G +DY+LK  V D+ +  
Sbjct  73   LLDAPLLVIVEITLVRGKPDVFEEFNAAIQALEEIQECHLVSGDFDYLLKTRVADMAEYR  132

Query  122  QLINQLMSLNISIGNFNTSIVLERIKENH  150
            +L+   +     + +  T +V+E +K+ +
Sbjct  133  KLLGTTLLRLPGVNDTRTYVVMEEVKQTN  161


>P37424 Leucine-responsive regulatory protein [Klebsiella pneumoniae]
Length=164

 Score = 89.4 bits (220),  Expect = 1e-26
 Identities = 47/149 (32%), Positives = 86/149 (58%), Gaps = 0/149 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  IL  LQ +GR+SN ELS+ +GLS + C  R   LE++G I GY A ++P    
Sbjct  12   LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD  71

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++  +EI L   + +  E+F   V+    I+E + ++G +DY+LK  V D++   +L+
Sbjct  72   ASLLVFVEITLNRGAPDVFEQFNSAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL  131

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQMM  153
             + +     + +  T +V+E +K++++++
Sbjct  132  GETLLRLPGVNDTRTYVVMEEVKQSNRLV  160


>P37425 Leucine-responsive regulatory protein [Serratia marcescens]
Length=164

 Score = 89.0 bits (219),  Expect = 1e-26
 Identities = 47/149 (32%), Positives = 86/149 (58%), Gaps = 0/149 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  IL  LQ +GR+SN ELS+ +GLS + C  R   LE++G I GY A ++P    
Sbjct  12   LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD  71

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++  +EI L   + +  E+F   V+    I+E + ++G +DY+LK  V D++   +L+
Sbjct  72   ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL  131

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQMM  153
             + +     + +  T +V+E +K++++++
Sbjct  132  GETLLRLPGVNDTRTYVVMEEVKQSNRLV  160


>P0ACJ1 Leucine-responsive regulatory protein [Escherichia coli 
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=164

 Score = 89.0 bits (219),  Expect = 1e-26
 Identities = 47/149 (32%), Positives = 86/149 (58%), Gaps = 0/149 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  IL  LQ +GR+SN ELS+ +GLS + C  R   LE++G I GY A ++P    
Sbjct  12   LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD  71

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++  +EI L   + +  E+F   V+    I+E + ++G +DY+LK  V D++   +L+
Sbjct  72   ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL  131

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQMM  153
             + +     + +  T +V+E +K++++++
Sbjct  132  GETLLRLPGVNDTRTYVVMEEVKQSNRLV  160


>P0ACJ2 Leucine-responsive regulatory protein [Escherichia coli 
O157:H7]
Length=164

 Score = 89.0 bits (219),  Expect = 1e-26
 Identities = 47/149 (32%), Positives = 86/149 (58%), Gaps = 0/149 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  IL  LQ +GR+SN ELS+ +GLS + C  R   LE++G I GY A ++P    
Sbjct  12   LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD  71

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++  +EI L   + +  E+F   V+    I+E + ++G +DY+LK  V D++   +L+
Sbjct  72   ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL  131

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQMM  153
             + +     + +  T +V+E +K++++++
Sbjct  132  GETLLRLPGVNDTRTYVVMEEVKQSNRLV  160


>P0ACJ4 Leucine-responsive regulatory protein [Klebsiella aerogenes]
Length=164

 Score = 89.0 bits (219),  Expect = 1e-26
 Identities = 47/149 (32%), Positives = 86/149 (58%), Gaps = 0/149 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  IL  LQ +GR+SN ELS+ +GLS + C  R   LE++G I GY A ++P    
Sbjct  12   LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD  71

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++  +EI L   + +  E+F   V+    I+E + ++G +DY+LK  V D++   +L+
Sbjct  72   ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL  131

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQMM  153
             + +     + +  T +V+E +K++++++
Sbjct  132  GETLLRLPGVNDTRTYVVMEEVKQSNRLV  160


>P0ACJ0 Leucine-responsive regulatory protein [Escherichia coli 
(strain K12)]
Length=164

 Score = 89.0 bits (219),  Expect = 1e-26
 Identities = 47/149 (32%), Positives = 86/149 (58%), Gaps = 0/149 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  IL  LQ +GR+SN ELS+ +GLS + C  R   LE++G I GY A ++P    
Sbjct  12   LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD  71

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++  +EI L   + +  E+F   V+    I+E + ++G +DY+LK  V D++   +L+
Sbjct  72   ASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL  131

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQMM  153
             + +     + +  T +V+E +K++++++
Sbjct  132  GETLLRLPGVNDTRTYVVMEEVKQSNRLV  160


>P0A2S0 Leucine-responsive regulatory protein [Salmonella typhimurium 
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=164

 Score = 88.6 bits (218),  Expect = 2e-26
 Identities = 47/149 (32%), Positives = 86/149 (58%), Gaps = 0/149 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  IL  LQ +GR+SN ELS+ +GLS + C  R   LE++G I GY A ++P    
Sbjct  12   LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLD  71

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++  +EI L   + +  E+F   V+    I+E + ++G +DY+LK  V D++   +L+
Sbjct  72   ASLLVFVEITLNRGAPDVFEQFNAAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLL  131

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQMM  153
             + +     + +  T +V+E +K++++++
Sbjct  132  GETLLRLPGVNDTRTYVVMEEVKQSNRLV  160


>Q44333 Proline dehydrogenase transcriptional activator [Rhizobium 
radiobacter]
Length=156

 Score = 87.0 bits (214),  Expect = 7e-26
 Identities = 46/144 (32%), Positives = 82/144 (57%), Gaps = 0/144 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD +D KIL  L  +GR+S  +LS+ +GLS + C  R   L  +G I+G+ A ++PQ   
Sbjct  10   LDHFDLKILEALSEDGRMSVLQLSKRVGLSKTPCQTRLKRLVDEGYILGFRAVLNPQKLG  69

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
               +   E+KL     + LE+F   V+    + E + + G++DY+LKV   D+ +  +++
Sbjct  70   VDHIAFAEVKLSDTREKALEEFNTAVRKIKEVEECHMIAGAFDYLLKVRTSDIRKYRRVL  129

Query  125  NQLMSLNISIGNFNTSIVLERIKE  148
             + +S   S+ N +T +V++ +KE
Sbjct  130  GEKISSLPSVSNTSTFVVMQSVKE  153


>P55658 Uncharacterized HTH-type transcriptional regulator y4tD 
[Sinorhizobium fredii (strain NBRC 101917 / NGR234)]
Length=169

 Score = 81.6 bits (200),  Expect = 1e-23
 Identities = 41/143 (29%), Positives = 78/143 (55%), Gaps = 0/143 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D  +L  +Q N RL+++EL++ +GLS + C RR   L   G+I    + V P+A  
Sbjct  18   LDRADVALLNAVQKNNRLTSEELADKVGLSPTACQRRLKRLRSLGVIEADVSIVSPKAVG  77

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
            +P+  ++ + L+    + +++F   ++N   +   Y +TG  D++L VT +D+ +  +  
Sbjct  78   RPVTMIVMVSLERERADIVDRFKSSIRNTREVMIGYYVTGDADFILIVTAKDMEEYEEFT  137

Query  125  NQLMSLNISIGNFNTSIVLERIK  147
             +    N  I  F T +V++R+K
Sbjct  138  RRFFYENHDIKGFKTMVVMDRVK  160


>P56901 Leucine-responsive regulatory protein [Rhizobium meliloti 
(strain 1021)]
Length=156

 Score = 80.5 bits (197),  Expect = 2e-23
 Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 0/148 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D KILR LQ +GR++N EL+E +G+S   C RR   LE+ G+I GY A ++  A  
Sbjct  7    LDAIDMKILRELQDDGRITNVELAERVGISAPPCLRRVRKLEEAGVIRGYRALLNASALG  66

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              ++    + L+H S   L+ F     +  ++RE + ++G  D++L+   E+L      +
Sbjct  67   YDLVAFCMVGLKHQSDANLKAFAARTASWPLVREAWMVSGESDFLLQCVAENLASFQDFV  126

Query  125  NQLMSLNISIGNFNTSIVLERIKENHQM  152
             + ++   ++    T + + ++K+  Q+
Sbjct  127  IEELTATENVDTVRTMLTIRQVKDACQV  154


>O07920 Transcriptional regulator AzlB [Bacillus subtilis (strain 
168)]
Length=157

 Score = 79.0 bits (193),  Expect = 9e-23
 Identities = 48/143 (34%), Positives = 73/143 (51%), Gaps = 0/143 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD+ D  ILR LQ +  +SN  LS+ IGLS S C  R   L + G+I  +   V  +   
Sbjct  5    LDETDKAILRDLQEDASISNLNLSKKIGLSPSACLARTKNLVEAGIIKKFTTIVDEKKLG  64

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              +  +  I L   + ET+  FL+ +     ++E Y LTGS+DY+LK+  +D+      I
Sbjct  65   IEVTALALINLSPLNRETIHSFLEDINKFPQVQECYTLTGSHDYMLKIVAKDMESYRNFI  124

Query  125  NQLMSLNISIGNFNTSIVLERIK  147
               +  N +I   +TSIV+   K
Sbjct  125  IDSLMQNPAISGVDTSIVMSTEK  147


>P0ACJ6 DNA-binding transcriptional activator DecR [Escherichia 
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=152

 Score = 77.8 bits (190),  Expect = 2e-22
 Identities = 43/143 (30%), Positives = 77/143 (54%), Gaps = 0/143 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D K+L  LQ +  LS Q L+E + L+T+ C +R   LE  G++IG  A + P+   
Sbjct  2    LDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIG  61

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              +   + IK QH+S E   +F+  V     +   +++ G YDY+++V V D+ +  +  
Sbjct  62   LGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFY  121

Query  125  NQLMSLNISIGNFNTSIVLERIK  147
             +L++    + +  +S  +E+IK
Sbjct  122  KRLVNSVPGLSDVTSSFAMEQIK  144


>P0ACJ7 DNA-binding transcriptional activator DecR [Escherichia 
coli O157:H7]
Length=152

 Score = 77.8 bits (190),  Expect = 2e-22
 Identities = 43/143 (30%), Positives = 77/143 (54%), Gaps = 0/143 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D K+L  LQ +  LS Q L+E + L+T+ C +R   LE  G++IG  A + P+   
Sbjct  2    LDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIG  61

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              +   + IK QH+S E   +F+  V     +   +++ G YDY+++V V D+ +  +  
Sbjct  62   LGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFY  121

Query  125  NQLMSLNISIGNFNTSIVLERIK  147
             +L++    + +  +S  +E+IK
Sbjct  122  KRLVNSVPGLSDVTSSFAMEQIK  144


>P0ACJ5 DNA-binding transcriptional activator DecR [Escherichia 
coli (strain K12)]
Length=152

 Score = 77.8 bits (190),  Expect = 2e-22
 Identities = 43/143 (30%), Positives = 77/143 (54%), Gaps = 0/143 (0%)

Query  5    LDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEK  64
            LD  D K+L  LQ +  LS Q L+E + L+T+ C +R   LE  G++IG  A + P+   
Sbjct  2    LDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIG  61

Query  65   QPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLI  124
              +   + IK QH+S E   +F+  V     +   +++ G YDY+++V V D+ +  +  
Sbjct  62   LGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFY  121

Query  125  NQLMSLNISIGNFNTSIVLERIK  147
             +L++    + +  +S  +E+IK
Sbjct  122  KRLVNSVPGLSDVTSSFAMEQIK  144


>P0DJA5 Glutamate uptake regulatory protein [Zymomonas mobilis 
subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)]
Length=164

 Score = 74.3 bits (181),  Expect = 6e-21
 Identities = 47/149 (32%), Positives = 76/149 (51%), Gaps = 1/149 (1%)

Query  1    MSQGLDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHP  60
            M + LDD+D KIL  LQ +   +  ELSE  GLS + C RR   LE  G+I      + P
Sbjct  1    MIRKLDDFDIKILDLLQHDATATMAELSEKTGLSANACWRRIRLLEADGVIKNRVTLLDP  60

Query  61   QAEKQPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQM  120
            Q     I   + I+   +S + L+ FL  V     + E Y+L G  DY+LK+ V  +++ 
Sbjct  61   QKIGLGITVFVCIRCAEHSQDWLDNFLQIVNESPEVIEFYRLAGDIDYLLKLQVASISEY  120

Query  121  SQLINQLMSLNISIGNFNTSIVLERIKEN  149
             +L  +L+S  + + + +    +E +K +
Sbjct  121  DRLYKKLVS-RVKLTDVSAIFSMEELKHS  148


>F8DT92 Glutamate uptake regulatory protein [Zymomonas mobilis 
subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 
8938 / NRRL B-806 / ZM1)]
Length=164

 Score = 74.3 bits (181),  Expect = 6e-21
 Identities = 47/149 (32%), Positives = 76/149 (51%), Gaps = 1/149 (1%)

Query  1    MSQGLDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHP  60
            M + LDD+D KIL  LQ +   +  ELSE  GLS + C RR   LE  G+I      + P
Sbjct  1    MIRKLDDFDIKILDLLQHDATATMAELSEKTGLSANACWRRIRLLEADGVIKNRVTLLDP  60

Query  61   QAEKQPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQM  120
            Q     I   + I+   +S + L+ FL  V     + E Y+L G  DY+LK+ V  +++ 
Sbjct  61   QKIGLGITVFVCIRCAEHSQDWLDNFLQIVNESPEVIEFYRLAGDIDYLLKLQVASISEY  120

Query  121  SQLINQLMSLNISIGNFNTSIVLERIKEN  149
             +L  +L+S  + + + +    +E +K +
Sbjct  121  DRLYKKLVS-RVKLTDVSAIFSMEELKHS  148


>Q52710 Proline dehydrogenase transcriptional activator [Rhodobacter 
capsulatus]
Length=154

 Score = 69.3 bits (168),  Expect = 4e-19
 Identities = 40/150 (27%), Positives = 78/150 (52%), Gaps = 0/150 (0%)

Query  1    MSQGLDDYDYKILRHLQSNGRLSNQELSEIIGLSTSQCSRRRIALEQKGMIIGYFAQVHP  60
            M+  +D  D +IL  L +N R+   EL+  +GLS +  + R  A+E+ G+I GY A + P
Sbjct  1    MTDLIDATDRRILHELCANARIPVTELARKVGLSKTPVAARIRAMEEMGLITGYRAMLSP  60

Query  61   QAEKQPIMGMIEIKLQHYSLETLEKFLDFVKNESMIREVYKLTGSYDYVLKVTVEDLNQM  120
                   +  +E++L     + LE+F   V+    + E Y + G +DY+LKV   D+ + 
Sbjct  61   IRLGLIHVTYVEVRLNDTRQKALEQFNAAVREIPEVEECYMIAGGFDYLLKVRSHDIAEY  120

Query  121  SQLINQLMSLNISIGNFNTSIVLERIKENH  150
             +++ + +S    +   ++ + +E + E +
Sbjct  121  RKIMGEKLSALPHVAATSSYVAMEAVVEQN  150


>P50337 Uncharacterized HTH-type transcriptional regulator y4sM 
[Sinorhizobium fredii (strain NBRC 101917 / NGR234)]
Length=127

 Score = 68.6 bits (166),  Expect = 4e-19
 Identities = 39/116 (34%), Positives = 62/116 (53%), Gaps = 0/116 (0%)

Query  31   IGLSTSQCSRRRIALEQKGMIIGYFAQVHPQAEKQPIMGMIEIKLQHYSLETLEKFLDFV  90
            +GLS S C RR   +EQ G+I GY A V P   +  I  +I I L+  + E L+KF   V
Sbjct  3    VGLSPSACLRRIKLMEQAGVIRGYTALVDPTQSESTIAVIINITLERQTEEYLDKFEAAV  62

Query  91   KNESMIREVYKLTGSYDYVLKVTVEDLNQMSQLINQLMSLNISIGNFNTSIVLERI  146
            +    IRE Y +TG  DY+L+V VE+     ++  +++S    +   ++S  +  +
Sbjct  63   RKHPEIRECYLMTGGSDYMLRVDVENAGAFERIHKEVLSTLPGVLRIHSSFSIRNV  118



Lambda      K        H        a         alpha
   0.321    0.136    0.374    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 298624


  Database: 99af96efd6f1811a4d7da2e2e5d8872a.SwissProt.fasta
    Posted date:  May 8, 2024  7:35 AM
  Number of letters in database: 3,017
  Number of sequences in database:  19



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40