BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e33329f7b2dff6518678c533a0a3f741.SwissProt.fasta
11 sequences; 2,796 total letters
Query= ACIAD1356
Length=224
Score E
Sequences producing significant alignments: (Bits) Value
O32080 Ktr system potassium uptake protein A [Bacillus subtilis (... 155 7e-51
P39760 Ktr system potassium uptake protein C [Bacillus subtilis (... 145 4e-47
O87952 Ktr system potassium uptake protein A [Vibrio alginolyticus] 117 3e-36
P75322 Uncharacterized protein MG323 homolog [Mycoplasma pneumoni... 94.4 3e-27
P47565 Uncharacterized protein MG323 [Mycoplasma genitalium (stra... 87.4 1e-24
P9WFZ2 Trk system potassium uptake protein TrkA [Mycobacterium tu... 52.0 8e-12
P9WFZ3 Trk system potassium uptake protein TrkA [Mycobacterium tu... 52.0 8e-12
Q9UXU0 Trk system potassium uptake protein TrkA homolog [Pyrococc... 50.1 4e-11
O57719 Trk system potassium uptake protein TrkA homolog [Pyrococc... 49.3 7e-11
P58936 Trk system potassium uptake protein TrkA homolog 2 [Methan... 45.8 2e-09
B9E6L4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [Macrococcus ... 35.0 6e-06
>O32080 Ktr system potassium uptake protein A [Bacillus subtilis
(strain 168)]
Length=222
Score = 155 bits (391), Expect = 7e-51
Identities = 84/209 (40%), Positives = 129/209 (62%), Gaps = 1/209 (0%)
Query 3 QFAVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEELN 62
QFAVIGLG FG ++ EL ++ H+V+ +D + V + THAVIA+A++E+ L L
Sbjct 8 QFAVIGLGRFGGSICKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLG 67
Query 63 IQNCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHLHVDKIIHPEED 122
I+N E V+VAIG +I+AS L L LK + +P IWVKA+ HH +L + D+IIHPE+D
Sbjct 68 IRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKD 127
Query 123 MGVRIAQALNYPMVSRYMALDNDHFIVKVEIPKHLNGVHLLGLINEMSDVKTIL-LKRGK 181
MGV+IAQ+L+ V Y+ L +++ IV++ + L+ ++ L TIL +K
Sbjct 128 MGVKIAQSLSDENVLNYIDLSDEYSIVELLATRKLDSKSIIDLNVRAKYGCTILAIKHHG 187
Query 182 DIIYEPDPTCPVQSKDILILEGHIDQLKK 210
DI P P ++ +D L++ GH +K+
Sbjct 188 DICLSPAPEDIIREQDCLVIMGHKKDIKR 216
>P39760 Ktr system potassium uptake protein C [Bacillus subtilis
(strain 168)]
Length=221
Score = 145 bits (366), Expect = 4e-47
Identities = 82/215 (38%), Positives = 126/215 (59%), Gaps = 1/215 (0%)
Query 3 QFAVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEELN 62
+FAVIGLG FG ++ L++ +V+ +D + V + + +HAVI D++DE VL+ L
Sbjct 4 EFAVIGLGRFGGSICKALSEEGVEVMAMDIDEDKVNEYAKIASHAVIGDSTDESVLKNLG 63
Query 63 IQNCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHLHVDKIIHPEED 122
++N + V+VAIGE+I+ASIL L LK +GV I VKA+ H +LS + D I+HPE D
Sbjct 64 LRNFDHVIVAIGENIQASILTTLILKELGVHTITVKAQNDYHEKVLSKIGADHIVHPERD 123
Query 123 MGVRIAQALNYPMVSRYMALDNDHFIVKVEIPKHLNGVHLLGL-INEMSDVKTILLKRGK 181
M RIA + V Y+ L +H +V++ L G LL L I + + +KRGK
Sbjct 124 MAKRIAHNIVSNNVLDYLELSEEHSLVEIVANSRLAGNTLLDLDIRAKYGINIVAIKRGK 183
Query 182 DIIYEPDPTCPVQSKDILILEGHIDQLKKLSRRFL 216
++I P T + +DILI+ G + + + +R L
Sbjct 184 EVIVSPLATEVIHQEDILIVIGSVTDISRFEKRVL 218
>O87952 Ktr system potassium uptake protein A [Vibrio alginolyticus]
Length=220
Score = 117 bits (293), Expect = 3e-36
Identities = 68/207 (33%), Positives = 113/207 (55%), Gaps = 1/207 (0%)
Query 3 QFAVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEELN 62
QFAVIGLG FG V EL V+ +D + V++ + ++ A++A+ + E + EL
Sbjct 7 QFAVIGLGRFGLAVCKELQDSGSQVLAVDINEDRVKEAAGFVSQAIVANCTHEETVAELK 66
Query 63 IQNCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHLHVDKIIHPEED 122
+ + + V++AIG D+ ASIL L K GV +WVKA + +L + D II PE D
Sbjct 67 LDDYDMVMIAIGADVNASILATLIAKEAGVKSVWVKANDRFQARVLQKIGADHIIMPERD 126
Query 123 MGVRIAQALNYPMVSRYMALDNDHFIVKVEIPKHLNGVHLLGL-INEMSDVKTILLKRGK 181
MG+R+A+ + V + L + + + + L G L L + ++ V+ + KRG
Sbjct 127 MGIRVARKMLDKRVLEFHPLGSGLAMTEFVVGSRLMGKTLSDLALCKVEGVQVLGYKRGP 186
Query 182 DIIYEPDPTCPVQSKDILILEGHIDQL 208
+II PD + ++ D++I+ G D+L
Sbjct 187 EIIKAPDMSTTLEIGDLIIVVGPQDKL 213
>P75322 Uncharacterized protein MG323 homolog [Mycoplasma pneumoniae
(strain ATCC 29342 / M129 / Subtype 1)]
Length=231
Score = 94.4 bits (233), Expect = 3e-27
Identities = 60/224 (27%), Positives = 110/224 (49%), Gaps = 4/224 (2%)
Query 2 AQFAVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEEL 61
A F +IGLG FG VA L + N ++ ID+ + + + H V D S+ L EL
Sbjct 4 ADFCIIGLGRFGMQVAHSLKENNFTLVLIDNDQHKTNTAAQEFDHVVCCDGSNLTALAEL 63
Query 62 NIQNCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHLHVDKIIHPEE 121
++ V+V + +IEASI+ +L+ +G I +AK + H+ +L + + + + PE+
Sbjct 64 QLEEFSAVIVGV-TNIEASIMICANLRELGQKNIIARAKNEVHNRVLRTMGIREALIPEK 122
Query 122 DMGVRIAQALNYPMVSRYMALDNDHFIVKVEIPKHLNGVHLLGLIN--EMSDVKTI-LLK 178
+G + L + M + + L ND V+ + LG IN E ++ I +++
Sbjct 123 IVGKNLVIRLIHGMETEIINLGNDILFVRAPVNNKKLFNRTLGEINIREHTNANLISIMR 182
Query 179 RGKDIIYEPDPTCPVQSKDILILEGHIDQLKKLSRRFLPHEKTK 222
GKD+++ P +Q D++ + + + R P++K K
Sbjct 183 NGKDVVFPLGPNTQIQPGDVITAVCQLSGVNQYLRYINPNDKNK 226
>P47565 Uncharacterized protein MG323 [Mycoplasma genitalium (strain
ATCC 33530 / DSM 19775 / NCTC 10195 / G37)]
Length=227
Score = 87.4 bits (215), Expect = 1e-24
Identities = 62/225 (28%), Positives = 106/225 (47%), Gaps = 4/225 (2%)
Query 2 AQFAVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEEL 61
A F +IGLG FG VA L + N +++ ID + + S Q + + DAS+ LEEL
Sbjct 4 ADFCIIGLGRFGMQVAQSLKENNFNLLLIDLDDKKTDTASQQFDYVICCDASNLTALEEL 63
Query 62 NIQNCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHLHVDKIIHPEE 121
I V+V + +IEASI+ +L+ +G I KAK + H +LS + + + + PE+
Sbjct 64 QIDEFAGVIVGV-TNIEASIMICANLRELGQKNIIAKAKNEVHKRVLSTMGIREALIPEK 122
Query 122 DMGVRIAQALNYPMVSRYMALDNDHFIVKVEIPKHLNGVHLLGLIN--EMSDVKTI-LLK 178
+G + L + + + + L N+ ++ + L IN + +D I +++
Sbjct 123 IVGKNLVIRLIHGLENEIINLGNEIIFIRSAVNNKAFFNKRLEEINFRQNTDANIISIMR 182
Query 179 RGKDIIYEPDPTCPVQSKDILILEGHIDQLKKLSRRFLPHEKTKN 223
K +++ P +Q DI+ L K P K KN
Sbjct 183 SNKTVVFPLGPNTEIQPGDIITAVCQQKSLNKYLNYINPKTKNKN 227
>P9WFZ2 Trk system potassium uptake protein TrkA [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=220
Score = 52.0 bits (123), Expect = 8e-12
Identities = 47/216 (22%), Positives = 95/216 (44%), Gaps = 4/216 (2%)
Query 5 AVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEELNIQ 64
AV G G+ G +V EL + HD+ I+ +++ + H + DA + +LE ++++
Sbjct 4 AVAGAGAVGRSVTRELVENGHDITLIERNPDHLDAAAIPEAHWRLGDACELSLLESIHLE 63
Query 65 NCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHL-HVDKIIHPEEDM 123
+ VV A G+D +L +L VP++ + + + + VD + +
Sbjct 64 EFDVVVAATGDDKVNVVLSLLAKTEFAVPRVVARVNDPRNEWLFNDAWGVDVAVSTPRML 123
Query 124 GVRIAQALNYPMVSRYMALDNDHF-IVKVEIPKHLN-GVHLLGLINEMSDVKTILLKRGK 181
I +A+ + R M +V++ +P + G + + D + + RG
Sbjct 124 ASLIEEAVTIGDLVRLMEFRTGQANLVEITLPDNTPWGGKPVRKLQLPRDAALVTILRGP 183
Query 182 DIIYEPDPTCPVQSKDILILEGHIDQLKKLSRRFLP 217
+I P+ P++ D L+ + ++LSR LP
Sbjct 184 RVIV-PEADEPLEGGDELLFVAVTEAEEELSRLLLP 218
>P9WFZ3 Trk system potassium uptake protein TrkA [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=220
Score = 52.0 bits (123), Expect = 8e-12
Identities = 47/216 (22%), Positives = 95/216 (44%), Gaps = 4/216 (2%)
Query 5 AVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEELNIQ 64
AV G G+ G +V EL + HD+ I+ +++ + H + DA + +LE ++++
Sbjct 4 AVAGAGAVGRSVTRELVENGHDITLIERNPDHLDAAAIPEAHWRLGDACELSLLESIHLE 63
Query 65 NCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHL-HVDKIIHPEEDM 123
+ VV A G+D +L +L VP++ + + + + VD + +
Sbjct 64 EFDVVVAATGDDKVNVVLSLLAKTEFAVPRVVARVNDPRNEWLFNDAWGVDVAVSTPRML 123
Query 124 GVRIAQALNYPMVSRYMALDNDHF-IVKVEIPKHLN-GVHLLGLINEMSDVKTILLKRGK 181
I +A+ + R M +V++ +P + G + + D + + RG
Sbjct 124 ASLIEEAVTIGDLVRLMEFRTGQANLVEITLPDNTPWGGKPVRKLQLPRDAALVTILRGP 183
Query 182 DIIYEPDPTCPVQSKDILILEGHIDQLKKLSRRFLP 217
+I P+ P++ D L+ + ++LSR LP
Sbjct 184 RVIV-PEADEPLEGGDELLFVAVTEAEEELSRLLLP 218
>Q9UXU0 Trk system potassium uptake protein TrkA homolog [Pyrococcus
abyssi (strain GE5 / Orsay)]
Length=227
Score = 50.1 bits (118), Expect = 4e-11
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query 6 VIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVI-ADASDEHVLEELNIQ 64
++G G G VA L HDV I+ + ++S+ ++ VI DA+D+ VLE NI+
Sbjct 5 IMGAGRIGTLVARMLESEGHDVAIIEMNRERAREISEYVSGLVIEGDATDQKVLENANIK 64
Query 65 NCETVVVAIGEDIEASILCVL--HL--KNMGVPQIWVKAKTKAHHMILS-HLHVDKIIHP 119
N + G D + C+L HL K M + +I K K + + D ++ P
Sbjct 65 NADAFAALTGRDDANILACILAKHLNPKIMTILRITDPGKKKIFEEVKELKRYFDIVVSP 124
Query 120 EEDMGVRIAQALNYPMVSRYM 140
E+ I + L P R +
Sbjct 125 EDIAANYIFRTLVTPGFDRVL 145
Score = 15.8 bits (29), Expect = 8.6
Identities = 6/12 (50%), Positives = 8/12 (67%), Gaps = 0/12 (0%)
Query 177 LKRGKDIIYEPD 188
LKR DI+ P+
Sbjct 114 LKRYFDIVVSPE 125
>O57719 Trk system potassium uptake protein TrkA homolog [Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974
/ NBRC 100139 / OT-3)]
Length=228
Score = 49.3 bits (116), Expect = 7e-11
Identities = 41/154 (27%), Positives = 69/154 (45%), Gaps = 6/154 (4%)
Query 6 VIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVI-ADASDEHVLEELNIQ 64
++G G G VA L HDV I+ + ++S+ ++ VI DA+D+ VLE NI+
Sbjct 5 IMGAGRIGTLVARMLESEGHDVAIIEMNRERAREISEYISGLVIEGDATDQKVLENANIK 64
Query 65 NCETVVVAIGEDIEASILCVL--HLKN--MGVPQIWVKAKTKAHHMILS-HLHVDKIIHP 119
N G+D + C+L HL M + +I K K + + D ++ P
Sbjct 65 NANAFAALTGKDDANILACILAKHLNPNIMTILRITDPGKKKIFEDVKELKTYFDIVVSP 124
Query 120 EEDMGVRIAQALNYPMVSRYMALDNDHFIVKVEI 153
E+ I + L P +R + I++ +I
Sbjct 125 EDIAANYIFRTLVTPGFNRVLLPREGAEIIQFQI 158
>P58936 Trk system potassium uptake protein TrkA homolog 2 [Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 /
Go1 / JCM 11833 / OCM 88)]
Length=448
Score = 45.8 bits (107), Expect = 2e-09
Identities = 33/119 (28%), Positives = 64/119 (54%), Gaps = 4/119 (3%)
Query 6 VIGLGSFGATVATELTK-LNHDVIGIDSVKRNVEDLSDQLTHAVI--ADASDEHVLEELN 62
+IG G G +A + K N D+ I+ K ++++ L +A+I D +D ++L E N
Sbjct 235 LIGCGIVGFYLAKIIDKDENADLKVIEYRKSRCIEVAEMLENALILNGDGTDVNLLREEN 294
Query 63 IQNCETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHLHVDKIIHPEE 121
I++ + VV+A+ ++ E ++LC L K MG ++ +A + + + +D + P E
Sbjct 295 IEDMD-VVIAVTDNDEKNLLCSLLAKQMGAKKVIARADRSDYVPLFEMVGIDIAVSPRE 352
Score = 28.1 bits (61), Expect = 0.001
Identities = 31/139 (22%), Positives = 58/139 (42%), Gaps = 12/139 (9%)
Query 6 VIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHAVIADASDEHVLEELNIQN 65
VIG G G +A L+ L HDVI I++ + + + V + ++ +L + + +
Sbjct 5 VIGAGEVGYHIAKFLS-LTHDVIVIENDEDALRRADELDVQVVEGNGANADILASV-LPD 62
Query 66 CETVVVAIGEDIEASILCVLHLKNMGVPQIWVKAKTKAHHMILSHLH----------VDK 115
+ +V G D + C+ + W + KT A ++ VD
Sbjct 63 VDILVAVTGVDEVNIVACMTAKLILRAHPGWKETKTIARVSNPDYIDVPVTSRAQVGVDI 122
Query 116 IIHPEEDMGVRIAQALNYP 134
+I PE + +A+ L+ P
Sbjct 123 MICPELALASEVAEVLSNP 141
>B9E6L4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [Macrococcus
caseolyticus (strain JCSC5402)]
Length=332
Score = 35.0 bits (79), Expect = 6e-06
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (8%)
Query 1 MAQFAVIGLGSFGATVATELTKLNHDVIGIDSVKRNVEDLSDQLTHA-VIADASDEHVLE 59
M Q +VIG GS+G +A L++ HDV+ + V +++ T+A + D H L+
Sbjct 1 MLQVSVIGTGSWGTALANVLSENQHDVLMWGKTQTTVNEINTHHTNAKYLKDTQLHHALK 60
Query 60 EL-NIQ----NCETVVVAI 73
NIQ + + +++A+
Sbjct 61 ATSNIQQAVLHAKIIIIAV 79
Lambda K H a alpha
0.323 0.139 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 437895
Database: e33329f7b2dff6518678c533a0a3f741.SwissProt.fasta
Posted date: May 9, 2024 7:07 PM
Number of letters in database: 2,796
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
