BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d60174553ffa129973682ec07a96e8a2.SwissProt.fasta
14 sequences; 1,629 total letters
Query= ACIAD1362
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
Q6FCI2 ATP-dependent Clp protease adapter protein ClpS [Acinetoba... 219 2e-79
A1WWV6 ATP-dependent Clp protease adapter protein ClpS [Halorhodo... 133 3e-45
B1JBE9 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 132 8e-45
Q88FS4 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 132 8e-45
B0KLX7 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 132 8e-45
A5W1G7 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 132 8e-45
A4XUY4 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 132 1e-44
C3JY63 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 130 4e-44
Q87ZS0 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 129 1e-43
Q4K9U7 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 129 1e-43
Q4ZRK6 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 129 1e-43
B2FQX5 ATP-dependent Clp protease adapter protein ClpS [Stenotrop... 128 3e-43
Q48H65 ATP-dependent Clp protease adapter protein ClpS [Pseudomon... 128 3e-43
P0A8Q6 ATP-dependent Clp protease adapter protein ClpS [Escherich... 110 2e-36
>Q6FCI2 ATP-dependent Clp protease adapter protein ClpS [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=107
Score = 219 bits (558), Expect = 2e-79
Identities = 106/107 (99%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 31 LGDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQ 90
+GDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQ
Sbjct 1 MGDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQ 60
Query 91 VMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPKD 137
VMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPKD
Sbjct 61 VMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPKD 107
>A1WWV6 ATP-dependent Clp protease adapter protein ClpS [Halorhodospira
halophila (strain DSM 244 / SL1)]
Length=106
Score = 133 bits (334), Expect = 3e-45
Identities = 62/102 (61%), Positives = 78/102 (76%), Gaps = 1/102 (1%)
Query 33 DSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVM 92
+ D+P+G V+ A P LK+PP+Y VVLLNDDYTPMDFV+E+LQ++F + QATQ+M
Sbjct 4 EPNQDDPQGP-EVEAAKPSLKQPPMYKVVLLNDDYTPMDFVVEVLQRFFNKDRSQATQIM 62
Query 93 LTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
L VH GKGV GVY RD+AETK +QVN+YAR HPLLC +E
Sbjct 63 LHVHTRGKGVCGVYSRDVAETKVSQVNDYAREHEHPLLCTME 104
>B1JBE9 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
putida (strain W619)]
Length=120
Score = 132 bits (332), Expect = 8e-45
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 1/101 (1%)
Query 35 QSDEPEGD-IAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVML 93
QS+E +G +AVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F+LN + AT++ML
Sbjct 17 QSNEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIML 76
Query 94 TVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
TVH EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 77 TVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIE 117
>Q88FS4 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB
11950 / KT2440)]
Length=120
Score = 132 bits (332), Expect = 8e-45
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 1/101 (1%)
Query 35 QSDEPEGD-IAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVML 93
QS+E +G +AVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F+LN + AT++ML
Sbjct 17 QSNEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIML 76
Query 94 TVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
TVH EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 77 TVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIE 117
>B0KLX7 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
putida (strain GB-1)]
Length=120
Score = 132 bits (332), Expect = 8e-45
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 1/101 (1%)
Query 35 QSDEPEGD-IAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVML 93
QS+E +G +AVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F+LN + AT++ML
Sbjct 17 QSNEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIML 76
Query 94 TVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
TVH EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 77 TVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIE 117
>A5W1G7 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 /
F1)]
Length=120
Score = 132 bits (332), Expect = 8e-45
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 1/101 (1%)
Query 35 QSDEPEGD-IAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVML 93
QS+E +G +AVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F+LN + AT++ML
Sbjct 17 QSNEDDGSGLAVQEAKPILQAPPMYKVVLFNDDYTPMDFVVEVLETFFSLNRELATKIML 76
Query 94 TVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
TVH EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 77 TVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIE 117
>A4XUY4 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
mendocina (strain ymp)]
Length=120
Score = 132 bits (331), Expect = 1e-44
Identities = 60/101 (59%), Positives = 77/101 (76%), Gaps = 0/101 (0%)
Query 34 SQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVML 93
++ ++ IAVQ + P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F +N + AT++ML
Sbjct 17 AEHEDDSSGIAVQESKPALQAPPMYKVVLFNDDYTPMDFVVEVLETFFGMNRELATKIML 76
Query 94 TVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
TVH EG+ V GVY RDIAETKA QVN YAR HPLLC+IE
Sbjct 77 TVHTEGRAVCGVYTRDIAETKAMQVNQYARESQHPLLCEIE 117
>C3JY63 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
fluorescens (strain SBW25)]
Length=122
Score = 130 bits (328), Expect = 4e-44
Identities = 66/126 (52%), Positives = 84/126 (67%), Gaps = 9/126 (7%)
Query 9 SLSEVKASFYQTGYVDWHINPRLGDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYT 68
++S+++ +F Q R D+ IAVQ A P L+ PP+Y VVL NDDYT
Sbjct 3 AISQIRLTFNQD---------RPDHEHDDDGSAGIAVQEAKPALQAPPMYKVVLFNDDYT 53
Query 69 PMDFVIEILQQYFALNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHP 128
PMDFV+E+L+ +F LN + AT+VML VH EG+ V GV+ RDIAETKA QVN YAR HP
Sbjct 54 PMDFVVEVLEVFFNLNRELATKVMLAVHTEGRAVCGVFTRDIAETKAMQVNQYARESQHP 113
Query 129 LLCQIE 134
LLC+IE
Sbjct 114 LLCEIE 119
>Q87ZS0 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
syringae pv. tomato (strain ATCC BAA-871 / DC3000)]
Length=120
Score = 129 bits (324), Expect = 1e-43
Identities = 61/103 (59%), Positives = 75/103 (73%), Gaps = 0/103 (0%)
Query 32 GDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQV 91
G ++ IAVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F LN + AT+V
Sbjct 15 GPQSHEDDSAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKV 74
Query 92 MLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
ML VH EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 75 MLAVHTEGRAVCGLFTRDIAETKAAQVNQYARESQHPLLCEIE 117
>Q4K9U7 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)]
Length=120
Score = 129 bits (324), Expect = 1e-43
Identities = 60/98 (61%), Positives = 74/98 (76%), Gaps = 0/98 (0%)
Query 37 DEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVMLTVH 96
D+ +AVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F LN + AT+VML VH
Sbjct 20 DDDSAGLAVQEAKPALQAPPMYKVVLFNDDYTPMDFVVEVLEMFFNLNRELATKVMLAVH 79
Query 97 YEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 80 TEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIE 117
>Q4ZRK6 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
syringae pv. syringae (strain B728a)]
Length=120
Score = 129 bits (324), Expect = 1e-43
Identities = 64/103 (62%), Positives = 77/103 (75%), Gaps = 1/103 (1%)
Query 33 DSQSDEPEG-DIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQV 91
D QS E + IAVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F LN + AT+V
Sbjct 15 DPQSHEDDSAGIAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKV 74
Query 92 MLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
ML VH EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 75 MLAVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIE 117
>B2FQX5 ATP-dependent Clp protease adapter protein ClpS [Stenotrophomonas
maltophilia (strain K279a)]
Length=108
Score = 128 bits (321), Expect = 3e-43
Identities = 58/101 (57%), Positives = 77/101 (76%), Gaps = 0/101 (0%)
Query 34 SQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVML 93
S + E +AV+ A PE+ PP Y V+LLNDDYTPMDFV+++LQQ+F+++LD+ATQVML
Sbjct 6 SPDSQHEHGVAVEAARPEVAPPPFYQVMLLNDDYTPMDFVVDVLQQFFSMDLDKATQVML 65
Query 94 TVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
VH G+GV GV+ R++AETK QVN Y+R HPLLC +E
Sbjct 66 HVHTRGRGVCGVFTREVAETKVAQVNEYSRMNQHPLLCTME 106
>Q48H65 ATP-dependent Clp protease adapter protein ClpS [Pseudomonas
savastanoi pv. phaseolicola (strain 1448A / Race 6)]
Length=120
Score = 128 bits (322), Expect = 3e-43
Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 1/101 (1%)
Query 34 SQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVML 93
S D+ G IAVQ A P L+ PP+Y VVL NDDYTPMDFV+E+L+ +F LN + AT+VML
Sbjct 18 SHEDDAAG-IAVQDAKPTLQAPPMYKVVLFNDDYTPMDFVVEVLEVFFNLNRELATKVML 76
Query 94 TVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
VH EG+ V G++ RDIAETKA QVN YAR HPLLC+IE
Sbjct 77 AVHTEGRAVCGLFTRDIAETKAMQVNQYARESQHPLLCEIE 117
>P0A8Q6 ATP-dependent Clp protease adapter protein ClpS [Escherichia
coli (strain K12)]
Length=106
Score = 110 bits (275), Expect = 2e-36
Identities = 47/92 (51%), Positives = 69/92 (75%), Gaps = 0/92 (0%)
Query 43 IAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQYFALNLDQATQVMLTVHYEGKGV 102
+A + LK P +Y V+L+NDDYTPM+FVI++LQ++F+ ++++ATQ+ML VHY+GK +
Sbjct 13 LAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAI 72
Query 103 AGVYPRDIAETKANQVNNYARSQGHPLLCQIE 134
GV+ ++AETK VN YAR HPLLC +E
Sbjct 73 CGVFTAEVAETKVAMVNKYARENEHPLLCTLE 104
Lambda K H a alpha
0.321 0.138 0.413 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 130572
Database: d60174553ffa129973682ec07a96e8a2.SwissProt.fasta
Posted date: May 29, 2024 1:38 PM
Number of letters in database: 1,629
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
