BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 705190bb9689eefc3e34c29615db1c3e.SwissProt.fasta
14 sequences; 5,297 total letters
Query= ACIAD1369
Length=370
Score E
Sequences producing significant alignments: (Bits) Value
P19906 Sensory histidine kinase/phosphatase NtrB [Vibrio alginoly... 263 6e-89
P0AFB6 Sensory histidine kinase/phosphatase NtrB [Escherichia col... 256 3e-86
P0AFB7 Sensory histidine kinase/phosphatase NtrB [Shigella flexneri] 256 3e-86
P0AFB5 Sensory histidine kinase/phosphatase NtrB [Escherichia col... 256 3e-86
P06218 Sensory histidine kinase/phosphatase NtrB [Klebsiella oxyt... 253 2e-85
P0A2D9 Sensory histidine kinase/phosphatase NtrB [Salmonella typh... 244 7e-82
P0A2E0 Sensory histidine kinase/phosphatase NtrB [Salmonella typhi] 244 7e-82
P28788 Sensory histidine kinase/phosphatase NtrB [Proteus hauseri] 230 3e-76
P45670 Sensory histidine kinase/phosphatase NtrB [Azospirillum br... 156 2e-47
P10578 Sensory histidine kinase/phosphatase NtrB [Bradyrhizobium ... 152 7e-46
P09431 Sensory histidine kinase/phosphatase NtrB [Rhodobacter cap... 147 2e-44
Q52977 Sensory histidine kinase/phosphatase NtrB [Rhizobium melil... 147 3e-44
P41503 Sensory histidine kinase/phosphatase NtrB [Rhizobium legum... 145 3e-43
Q06067 Signal transduction histidine-protein kinase AtoS [Escheri... 134 6e-38
>P19906 Sensory histidine kinase/phosphatase NtrB [Vibrio alginolyticus]
Length=350
Score = 263 bits (671), Expect = 6e-89
Identities = 148/351 (42%), Positives = 216/351 (62%), Gaps = 13/351 (4%)
Query 12 LVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLL-HAPNDTFNTHEALL 70
+++NM TA L++D L I Y N + E LF S R Q + L+ HA D L
Sbjct 9 ILNNMVTATLILDDGLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASLDL----ALLT 64
Query 71 NTLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISKEEN 130
L+S Q T + T V+ + + ++ TVS + K +LL+E+ ID+ ++S+E N
Sbjct 65 QPLQSGQSITDSDVTFVVDGRPLMLEVTVSPITWQKQL--MLLVEMRKIDQQRRLSQELN 122
Query 131 FIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
Q Q A+ L+RG+AHEIKNPLGG+RGA QLL + L DP E+T III + DRLR L
Sbjct 123 QHAQQQAAKLLVRGLAHEIKNPLGGLRGAAQLLEKMLPDPSLTEYTHIIIEQADRLRALV 182
Query 191 DTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVM 250
D +LG ++ N+H+ LE+VR L+ ++++ I I RDYD SLP++ D DQ+ Q M
Sbjct 183 DRLLGPQKPGKKTQENLHQILEKVRQLVELESQRSIVIERDYDPSLPEILMDADQIEQAM 242
Query 251 LNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIEDNGPGIPED 310
LNI NA Q ++ + ++ +RTR I+G + A R++I DNGPGIP +
Sbjct 243 LNIVSNAAQILSH------QEHGKITIRTRTVHQANIHGKRCKLAARVEITDNGPGIPPE 296
Query 311 ILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
+ +++FYP+V+GR GTGLGLSI+QN++ QHNG I+ +S PG T F++YLP
Sbjct 297 LQDTLFYPMVSGREGGTGLGLSISQNLIDQHNGKIDVESWPGHTTFTIYLP 347
>P0AFB6 Sensory histidine kinase/phosphatase NtrB [Escherichia
coli O157:H7]
Length=349
Score = 256 bits (653), Expect = 3e-86
Identities = 143/351 (41%), Positives = 221/351 (63%), Gaps = 17/351 (5%)
Query 12 LVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTH-EALL 70
+++++ +ILL+D NL I Y N + + L S + G P+ LL F+ + E +
Sbjct 12 ILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELL----SYFSLNIELMQ 67
Query 71 NTLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISKEEN 130
+L++ Q +T E T+ ++ + + T ++ G ++L+E+ P+D ++S+E+
Sbjct 68 ESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG-----MILLEMAPMDNQRRLSQEQL 122
Query 131 FIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
Q AR L+RG+AHEIKNPLGG+RGA QLL+++L DP E+T +II + DRLRNL
Sbjct 123 QHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLV 182
Query 191 DTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVM 250
D +LG + + +IH+ ERV +L+ + +++IRDYD SLP++ D DQ+ QV+
Sbjct 183 DRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVL 242
Query 251 LNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIEDNGPGIPED 310
LNI NA+QA+ +++LRTR +T++G R A RID+EDNGPGIP
Sbjct 243 LNIVRNALQALG-------PEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPH 295
Query 311 ILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
+ +++FYP+V+GR GTGLGLSIA+N++ QH+G IE S PG T FS+YLP
Sbjct 296 LQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLP 346
>P0AFB7 Sensory histidine kinase/phosphatase NtrB [Shigella flexneri]
Length=349
Score = 256 bits (653), Expect = 3e-86
Identities = 143/351 (41%), Positives = 221/351 (63%), Gaps = 17/351 (5%)
Query 12 LVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTH-EALL 70
+++++ +ILL+D NL I Y N + + L S + G P+ LL F+ + E +
Sbjct 12 ILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELL----SYFSLNIELMQ 67
Query 71 NTLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISKEEN 130
+L++ Q +T E T+ ++ + + T ++ G ++L+E+ P+D ++S+E+
Sbjct 68 ESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG-----MILLEMAPMDNQRRLSQEQL 122
Query 131 FIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
Q AR L+RG+AHEIKNPLGG+RGA QLL+++L DP E+T +II + DRLRNL
Sbjct 123 QHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLV 182
Query 191 DTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVM 250
D +LG + + +IH+ ERV +L+ + +++IRDYD SLP++ D DQ+ QV+
Sbjct 183 DRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVL 242
Query 251 LNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIEDNGPGIPED 310
LNI NA+QA+ +++LRTR +T++G R A RID+EDNGPGIP
Sbjct 243 LNIVRNALQALG-------PEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPH 295
Query 311 ILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
+ +++FYP+V+GR GTGLGLSIA+N++ QH+G IE S PG T FS+YLP
Sbjct 296 LQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLP 346
>P0AFB5 Sensory histidine kinase/phosphatase NtrB [Escherichia
coli (strain K12)]
Length=349
Score = 256 bits (653), Expect = 3e-86
Identities = 143/351 (41%), Positives = 221/351 (63%), Gaps = 17/351 (5%)
Query 12 LVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTH-EALL 70
+++++ +ILL+D NL I Y N + + L S + G P+ LL F+ + E +
Sbjct 12 ILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELL----SYFSLNIELMQ 67
Query 71 NTLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISKEEN 130
+L++ Q +T E T+ ++ + + T ++ G ++L+E+ P+D ++S+E+
Sbjct 68 ESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG-----MILLEMAPMDNQRRLSQEQL 122
Query 131 FIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
Q AR L+RG+AHEIKNPLGG+RGA QLL+++L DP E+T +II + DRLRNL
Sbjct 123 QHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLV 182
Query 191 DTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVM 250
D +LG + + +IH+ ERV +L+ + +++IRDYD SLP++ D DQ+ QV+
Sbjct 183 DRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVL 242
Query 251 LNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIEDNGPGIPED 310
LNI NA+QA+ +++LRTR +T++G R A RID+EDNGPGIP
Sbjct 243 LNIVRNALQALG-------PEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPH 295
Query 311 ILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
+ +++FYP+V+GR GTGLGLSIA+N++ QH+G IE S PG T FS+YLP
Sbjct 296 LQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLP 346
>P06218 Sensory histidine kinase/phosphatase NtrB [Klebsiella
oxytoca]
Length=349
Score = 253 bits (647), Expect = 2e-85
Identities = 143/351 (41%), Positives = 218/351 (62%), Gaps = 17/351 (5%)
Query 12 LVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTHEALLN 71
+++++ +ILLVD +L + Y N + + L S + G P+ LL F+ + L+
Sbjct 12 ILNSLINSILLVDDDLAVHYANPAAQQLLAQSSRKLFGTPLPELL----SYFSLNIGLMQ 67
Query 72 -TLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISKEEN 130
+L + Q +T E T+ ++ + + T +L G +L+E+ P+D ++S+E+
Sbjct 68 ESLAAGQGFTDNEVTLVIDGRSHILSLTAQRLPEG-----YILLEMAPMDNQRRLSQEQL 122
Query 131 FIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
Q AR L+RG+AHEIKNPLGG+RGA QLL+++L DP E+T +II + DRLRNL
Sbjct 123 QHAQQIAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALMEYTKVIIEQADRLRNLV 182
Query 191 DTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVM 250
D +LG + + +IH+ ERV L+ + +K++RDYD SLP++ D DQ+ QV+
Sbjct 183 DRLLGPQHPGMHVTESIHKVAERVVKLVSMELPDNVKLVRDYDPSLPELPHDPDQIEQVL 242
Query 251 LNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIEDNGPGIPED 310
LNI NA+QA+ ++ LRTR +T++GV R A RID+EDNGPGIP
Sbjct 243 LNIVRNALQALG-------PEGGEITLRTRTAFQLTLHGVRYRLAARIDVEDNGPGIPSH 295
Query 311 ILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
+ +++FYP+V+GR GTGLGLSIA++++ QH+G IE S PG T FS+YLP
Sbjct 296 LQDTLFYPMVSGREGGTGLGLSIARSLIDQHSGKIEFTSWPGHTEFSVYLP 346
>P0A2D9 Sensory histidine kinase/phosphatase NtrB [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=349
Score = 244 bits (624), Expect = 7e-82
Identities = 140/351 (40%), Positives = 215/351 (61%), Gaps = 17/351 (5%)
Query 12 LVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTHEALLN 71
+++++ ++L+VD L I Y N + + L S + G P+ LL F+ + L+
Sbjct 12 ILNSLINSVLVVDDALAIHYANPAAQQLLAQSSRKLFGTPLPELL----SYFSLNIDLMR 67
Query 72 -TLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISKEEN 130
+L + Q +T E T+ ++ + + T +L +L+E+ P+D ++S+E+
Sbjct 68 ESLAAGQGFTDNEVTLVIDSRSHILSLTAQRLPDD-----FILLEMAPMDNQRRLSQEQL 122
Query 131 FIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
Q AR L+RG+AHEIKNPLGG+RGA QLL+++L DP E+T +II + DRLRNL
Sbjct 123 QHAQQIAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALTEYTKVIIEQADRLRNLV 182
Query 191 DTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVM 250
D +LG + + +IH+ ERV +L+ + +++IRDYD SLP++ D +Q+ QV+
Sbjct 183 DRLLGPQHPGMHITESIHKVAERVVALVSMELPDNVRLIRDYDPSLPELPHDPEQIEQVL 242
Query 251 LNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIEDNGPGIPED 310
LNI NA+QA+ ++ LRTR +T++G R A RID+EDNGPGIP
Sbjct 243 LNIVRNALQALG-------PEGGEITLRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPH 295
Query 311 ILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
+ +++FYP+V+GR GTGLGLSIA+N++ QH G IE S PG T FS+YLP
Sbjct 296 LQDTLFYPMVSGREGGTGLGLSIARNLIDQHAGKIEFTSWPGHTEFSVYLP 346
>P0A2E0 Sensory histidine kinase/phosphatase NtrB [Salmonella
typhi]
Length=349
Score = 244 bits (624), Expect = 7e-82
Identities = 140/351 (40%), Positives = 215/351 (61%), Gaps = 17/351 (5%)
Query 12 LVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTHEALLN 71
+++++ ++L+VD L I Y N + + L S + G P+ LL F+ + L+
Sbjct 12 ILNSLINSVLVVDDALAIHYANPAAQQLLAQSSRKLFGTPLPELL----SYFSLNIDLMR 67
Query 72 -TLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISKEEN 130
+L + Q +T E T+ ++ + + T +L +L+E+ P+D ++S+E+
Sbjct 68 ESLAAGQGFTDNEVTLVIDSRSHILSLTAQRLPDD-----FILLEMAPMDNQRRLSQEQL 122
Query 131 FIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
Q AR L+RG+AHEIKNPLGG+RGA QLL+++L DP E+T +II + DRLRNL
Sbjct 123 QHAQQIAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALTEYTKVIIEQADRLRNLV 182
Query 191 DTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVM 250
D +LG + + +IH+ ERV +L+ + +++IRDYD SLP++ D +Q+ QV+
Sbjct 183 DRLLGPQHPGMHITESIHKVAERVVALVSMELPDNVRLIRDYDPSLPELPHDPEQIEQVL 242
Query 251 LNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIEDNGPGIPED 310
LNI NA+QA+ ++ LRTR +T++G R A RID+EDNGPGIP
Sbjct 243 LNIVRNALQALG-------PEGGEITLRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPH 295
Query 311 ILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
+ +++FYP+V+GR GTGLGLSIA+N++ QH G IE S PG T FS+YLP
Sbjct 296 LQDTLFYPMVSGREGGTGLGLSIARNLIDQHAGKIEFTSWPGHTEFSVYLP 346
>P28788 Sensory histidine kinase/phosphatase NtrB [Proteus hauseri]
Length=348
Score = 230 bits (586), Expect = 3e-76
Identities = 137/359 (38%), Positives = 209/359 (58%), Gaps = 25/359 (7%)
Query 8 DYRLLVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAP-NDTFNTH 66
D L++D++ ++L+++ I Y N + L+ Q L P D F+ H
Sbjct 8 DNTLILDSLIHSVLVINQEFIICYANHAA--------LQVLAQSRRKLFETPFTDLFSYH 59
Query 67 ----EALLNTLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRM 122
E + TL + Q +T E + ++ + +T+S L+ +L+EL P+D
Sbjct 60 SFDAELMQETLANGQSFTDNEVILVIH----NQSHTMS-LSAQPISEQHILLELAPMDSQ 114
Query 123 LKISKEENFIQQHQVARQLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINE 182
++S+E+ Q AR+L+RG+AHEIKNPLGG+RGA QLLA+SL DP E+T +II +
Sbjct 115 RRLSQEQIQQAQQIAARELVRGLAHEIKNPLGGLRGAAQLLAKSLPDPALTEYTQVIIEQ 174
Query 183 VDRLRNLADTMLGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKAD 242
DRLR L D +LG + +IH +ERV LI + + + +++DYD SLP++
Sbjct 175 ADRLRTLVDRLLGPQHPGKKTHQSIHHVVERVAQLISLECPENVTLLKDYDPSLPELSHY 234
Query 243 RDQLIQVMLNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIED 302
DQ+ QV+LNI+ NA+QA+ + ++LRTR +T++G +R RID+ D
Sbjct 235 PDQIEQVLLNITRNALQAVEKT-------GGTIILRTRTAFQITLHGERHRLVARIDVID 287
Query 303 NGPGIPEDILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
G GIP + +++FYP+V+GR G GLGLSIA+N++ QH G IE S PG T FS+YLP
Sbjct 288 TGSGIPPHLQDTLFYPMVSGREDGNGLGLSIARNLVDQHAGKIEFTSWPGNTEFSIYLP 346
>P45670 Sensory histidine kinase/phosphatase NtrB [Azospirillum
brasilense]
Length=400
Score = 156 bits (395), Expect = 2e-47
Identities = 118/370 (32%), Positives = 185/370 (50%), Gaps = 31/370 (8%)
Query 4 QPTIDYRLLVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTF 63
+P ID ++++ + +L+VD + +I Y+N + F +S G P+ LL PN
Sbjct 28 RPCIDPSVMLNALPDPVLVVDGSGDIRYVNLEAQEFFGLSAAMMEGMPLAELL-PPNSPV 86
Query 64 NTHEALLNTLKSSQHYTRREATI--NVNFKDIHVDYTVSQLNTGKPY-HPLLLIELNPID 120
+ L+ ++ +H +E + HV V+ L G+P H LL + +
Sbjct 87 SQ---LIEQVQQGRHRASQEGVVIDTPRIGPHHVTVRVTAL--GEPADHVLLTVNERTLA 141
Query 121 RMLKISKEENFIQQHQVARQ---LIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTD 177
R K +N + AR + + HE+KNPL GIRGA QLL + ++ T
Sbjct 142 R-----KIDNSLTHRNAARSVTAMASMLGHEVKNPLSGIRGAAQLLEENCSESDRV-LTR 195
Query 178 IIINEVDRLRNLADTM-LGSRQLPSYED-VNIHEPLERVRSLIVNQTKKKIKIIRDYDLS 235
+I +E DR+ L + M + S Q P D VNIH LE VR + + + I+ I YD S
Sbjct 196 LICDEADRIVALVNRMEVFSDQRPLERDAVNIHTVLEHVRKVAQSGFARNIRFIERYDPS 255
Query 236 LPDVKADRDQLIQVMLNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTI----NGVL 291
LP V +RDQLIQ+ LN+ NA +A E+ +++L T Q V +
Sbjct 256 LPPVYGNRDQLIQIFLNLIKNAAEAAPESGG-------EIILSTSYQHGVRMALPGGDTR 308
Query 292 NRSAVRIDIEDNGPGIPEDILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIP 351
+ + ++DNG GIP+D+ ++F +T + GTGLGL++ I+ H G+IE S P
Sbjct 309 LHLPLLVSVQDNGDGIPDDLRSNLFDAFITTKVNGTGLGLALVAKIVGDHGGVIEFDSQP 368
Query 352 GKTVFSLYLP 361
+TVF + LP
Sbjct 369 RRTVFKVSLP 378
>P10578 Sensory histidine kinase/phosphatase NtrB [Bradyrhizobium
sp. (strain RP501 Parasponia)]
Length=377
Score = 152 bits (383), Expect = 7e-46
Identities = 114/356 (32%), Positives = 181/356 (51%), Gaps = 18/356 (5%)
Query 8 DYRLLVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTHE 67
D +++ + +LLV + I N + E+ F+IS Q + L+ + E
Sbjct 14 DGEAILNALPNPVLLVAPDGRIVDANIAAESFFEISTQFLRRQSLKELVPFGSPLLALIE 73
Query 68 ALLNTLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIELNPIDRMLKISK 127
+ + Y T + D VD V+ L T +P H +++++ I K
Sbjct 74 QVRTSGSPVNEYKVDLGTPRIG-GDRQVDLHVAPL-TERPGHIVVMLQERTI-----ADK 126
Query 128 EENFIQQHQVARQLIR---GVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVD 184
+ + AR +I +AHEIKNPL GIRGA QLL + + T +I +E D
Sbjct 127 MDRQLTHRSAARSVIALAAMLAHEIKNPLSGIRGAAQLLEQQASSEDRL-LTRLICDEAD 185
Query 185 RLRNLADTM--LGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKAD 242
R+ L D M G + + VNIH L+ V+ L + + ++ I DYD SLP V A+
Sbjct 186 RIVTLVDRMEVFGDDRPVARGPVNIHSVLDHVKRLAQSGFARNVRFIEDYDPSLPPVLAN 245
Query 243 RDQLIQVMLNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRID--I 300
+DQLIQV LN+ NA +A+ + + E QL R +++ G +R ++ ++ +
Sbjct 246 QDQLIQVFLNLVKNAAEAVAD---LGTDAEIQLTTAFRPGVRLSVPGKKSRVSLPLEFCV 302
Query 301 EDNGPGIPEDILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVF 356
+DNG G+PED+L ++F P VT + G+GLGL++ I+ H G+IEC+S P KT F
Sbjct 303 KDNGSGVPEDLLPNLFDPFVTTKQTGSGLGLALVAKIVGDHGGIIECESQPRKTTF 358
>P09431 Sensory histidine kinase/phosphatase NtrB [Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)]
Length=355
Score = 147 bits (372), Expect = 2e-44
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 14/222 (6%)
Query 145 VAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLADTM--LGSRQLPSY 202
+AHEIKNPL GI GA QLL+ L+ E TD+I++E R+ L + + G+ + P
Sbjct 137 LAHEIKNPLAGIAGAAQLLSMGLSGEDL-ELTDLIVDETRRIVKLLEQVEQFGNVRPPEM 195
Query 203 EDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQVMLNISVNAIQAIT 262
+ VNIH+ L+R R + I+ DYD SLP D DQL QV LN+ NA +A
Sbjct 196 KPVNIHDVLDRARKSAGVGFGAHMLIVEDYDPSLPPTLGDADQLTQVFLNLLKNASEA-- 253
Query 263 ENKEFFVEHEPQLMLRTRIQ---RLVTINGVLNRSAVRIDIEDNGPGIPEDILESVFYPL 319
+ + + LRT RL +G R +++++ D+GPGIP DI S+F P
Sbjct 254 ------AKGQGTIRLRTFYDYALRLRRPDGGGQRLPLQVEVIDDGPGIPADIASSIFEPF 307
Query 320 VTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLP 361
V+GR GTGLGL++ I+ +HNG I +S PG+T+F + LP
Sbjct 308 VSGRENGTGLGLALVSKIISEHNGWISVESAPGRTLFRISLP 349
>Q52977 Sensory histidine kinase/phosphatase NtrB [Rhizobium meliloti
(strain 1021)]
Length=382
Score = 147 bits (372), Expect = 3e-44
Identities = 113/366 (31%), Positives = 180/366 (49%), Gaps = 53/366 (14%)
Query 20 ILLVDSNLNIFYLNSSCEALF----------DISLLRASGQPVINLLHAPNDTFNTHEAL 69
++LVD N + + N E+ F DIS G P++ L+ + A
Sbjct 27 VILVDENGFVAFANWEAESFFGASANHLARHDISAFIPFGSPLLTLIEQVRE----RRAA 82
Query 70 LNTLKSSQHYTRREATINVNFKDIHVDYTVSQLNTGKPYHPLLLIE----LNPIDRMLKI 125
+N + R A V D++V +SQ P +++ + + IDR L
Sbjct 83 VNEYRVDLSSPRLGADKLV---DLYVAPVLSQ-----PGSVVIVFQERSMADKIDRQLT- 133
Query 126 SKEENFIQQHQVARQLIRGVA----HEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIIN 181
H+ A + + G+A HEIKNPL GIRGA QLL S+ND + T +I +
Sbjct 134 ---------HRAAARSVTGLASMLAHEIKNPLSGIRGAAQLLETSVNDEDRS-LTRLICD 183
Query 182 EVDRLRNLADTM--LGSRQLPSYEDVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDV 239
E DR+ +L D M + +NIH L+ V+++ ++IKI YD SLP V
Sbjct 184 ETDRIVSLVDRMEVFSDERPVDRLPLNIHAVLDHVKAIAKAGFARRIKISEHYDPSLPPV 243
Query 240 KADRDQLIQVMLNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRID 299
A+RDQL+QV LN+ NA +AI + + +++L T + + ++ R + +
Sbjct 244 FANRDQLVQVFLNLIKNAAEAIGDRAD------GEILLTTAYRPGIRLSVAGTREKISLP 297
Query 300 IE----DNGPGIPEDILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTV 355
+E DNGPG+P D+L +F P +T + G+GLGL++ I+ H G++EC S +T
Sbjct 298 LEFCVHDNGPGVPPDLLPHLFDPFITTKTNGSGLGLALVAKIIGGHGGIVECDSQHSRTT 357
Query 356 FSLYLP 361
F + +P
Sbjct 358 FRVLMP 363
>P41503 Sensory histidine kinase/phosphatase NtrB [Rhizobium leguminosarum
bv. phaseoli]
Length=383
Score = 145 bits (365), Expect = 3e-43
Identities = 90/241 (37%), Positives = 136/241 (56%), Gaps = 17/241 (7%)
Query 135 HQVARQLIRGVA----HEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRLRNLA 190
H+ A + + G+A HEIKNPL G RGA QLL +S+ D A T +I +E DR+ +L
Sbjct 134 HRAAARSVTGLASSLAHEIKNPLSGNRGAAQLLEQSVIDDDRA-LTRLICDETDRIVSLV 192
Query 191 DTM-LGSRQLPSYE-DVNIHEPLERVRSLIVNQTKKKIKIIRDYDLSLPDVKADRDQLIQ 248
D M + S + P VNIH L+ V+ L + + I+I YD SLP V A+RDQL+Q
Sbjct 193 DRMEVFSDERPVRRMPVNIHSVLDHVKRLAQSGFARNIRITESYDPSLPAVYANRDQLVQ 252
Query 249 VMLNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIE----DNG 304
V LN+ NA +A+ + + ++ML T + + ++ R + + +E DNG
Sbjct 253 VFLNLVKNAAEAVGDRPD------GEIMLTTAYRPGIRLSVAGTREKISLPLEFCVHDNG 306
Query 305 PGIPEDILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPGKTVFSLYLPWES 364
PG+P D+L +F P +T + G+GLGL++ I+ H G+IEC S +T F + +P
Sbjct 307 PGVPADLLPHLFDPFITTKTNGSGLGLALVAKIIGDHGGIIECDSQNSRTTFRVLMPASK 366
Query 365 D 365
D
Sbjct 367 D 367
>Q06067 Signal transduction histidine-protein kinase AtoS [Escherichia
coli (strain K12)]
Length=608
Score = 134 bits (336), Expect = 6e-38
Identities = 101/361 (28%), Positives = 178/361 (49%), Gaps = 37/361 (10%)
Query 11 LLVDNMTTAILLVDSNLNIFYLNSSCEALFDISLLRASGQPVINLLHAPNDTFNTHEALL 70
L+++N ++ +D ++ +N + E + GQP L D + +L
Sbjct 266 LIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLF----DNTQFYSPVL 321
Query 71 NTLKSSQHYTRREATINVNFKDIHVDYTVSQLNT--GKPYHPLLLIELNPIDRMLKISKE 128
+TL+ + E + + I + T S+++ G+ L++ D + +
Sbjct 322 DTLEHGTEHVALEISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFS----DLTARKETQ 377
Query 129 ENFIQQHQVAR--QLIRGVAHEIKNPLGGIRGATQLLARSLNDPKYAEFTDIIINEVDRL 186
Q ++A +L+ GVAHE++NPL IRG Q+L + +DP + E+ +++ E+D +
Sbjct 378 RRMAQAERLATLGELMAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSI 437
Query 187 RNLADTMLG-SRQLPS-YEDVNIHEPLERVRSLIVNQT---KKKIKIIRDYDLSLPDVKA 241
+ +L SR S ++ V+++ +E +L++ QT + ++ I + D L + A
Sbjct 438 NKVIQQLLEFSRPRHSQWQQVSLNALVEE--TLVLVQTAGVQARVDFISELDNELSPINA 495
Query 242 DRDQLIQVMLNISVNAIQAITENKEFFVEHEPQLMLRTRIQRLVTINGVLNRSAVRIDIE 301
DR+ L QV+LNI +NA+QAI+ + RIQ + S I IE
Sbjct 496 DRELLKQVLLNILINAVQAISARGKI------------RIQ-----TWQYSDSQQAISIE 538
Query 302 DNGPGIPEDILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSIPG-KTVFSLYL 360
DNG GI + + +F P T +A GTGLGL+++Q I++ H G I S+PG F+L L
Sbjct 539 DNGCGIDLSLQKKIFDPFFTTKASGTGLGLALSQRIINAHQGDIRVASLPGYGATFTLIL 598
Query 361 P 361
P
Sbjct 599 P 599
Lambda K H a alpha
0.321 0.138 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1489250
Database: 705190bb9689eefc3e34c29615db1c3e.SwissProt.fasta
Posted date: May 9, 2024 3:21 AM
Number of letters in database: 5,297
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
