BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 076710abbfc39de7de16f938be8a3977.SwissProt.fasta
23 sequences; 10,696 total letters
Query= ACIAD1371
Length=448
Score E
Sequences producing significant alignments: (Bits) Value
Q6FCH4 Ribosomal protein uS12 methylthiotransferase RimO [Acineto... 900 0.0
B0V6E8 Ribosomal protein uS12 methylthiotransferase RimO [Acineto... 872 0.0
B7H1U1 Ribosomal protein uS12 methylthiotransferase RimO [Acineto... 872 0.0
B7I9V4 Ribosomal protein uS12 methylthiotransferase RimO [Acineto... 871 0.0
A3M659 Ribosomal protein uS12 methylthiotransferase RimO [Acineto... 870 0.0
B0VMU3 Ribosomal protein uS12 methylthiotransferase RimO [Acineto... 870 0.0
B2I330 Ribosomal protein uS12 methylthiotransferase RimO [Acineto... 870 0.0
Q4FRH4 Ribosomal protein uS12 methylthiotransferase RimO [Psychro... 669 0.0
Q1QA11 Ribosomal protein uS12 methylthiotransferase RimO [Psychro... 667 0.0
A5F514 Ribosomal protein uS12 methylthiotransferase RimO [Vibrio ... 645 0.0
Q9KNW0 Ribosomal protein uS12 methylthiotransferase RimO [Vibrio ... 644 0.0
A5WGF2 Ribosomal protein uS12 methylthiotransferase RimO [Psychro... 640 0.0
Q7NYA1 Ribosomal protein uS12 methylthiotransferase RimO [Chromob... 639 0.0
P0AEI4 Ribosomal protein uS12 methylthiotransferase RimO [Escheri... 627 0.0
Q55803 Ribosomal protein uS12 methylthiotransferase RimO [Synecho... 295 4e-99
Q9X2H6 Ribosomal protein uS12 methylthiotransferase RimO [Thermot... 270 3e-89
Q9ZEN7 Ribosomal protein uS12 methylthiotransferase RimO [Wolinel... 206 2e-64
D5ZT17 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [St... 186 1e-56
Q9WZC1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [Th... 165 4e-49
O31778 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [Ba... 156 2e-45
P54462 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB... 154 3e-45
Q9L699 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [Pa... 143 7e-41
P0AEI1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [Es... 140 7e-40
>Q6FCH4 Ribosomal protein uS12 methylthiotransferase RimO [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=447
Score = 900 bits (2327), Expect = 0.0
Identities = 447/447 (100%), Positives = 447/447 (100%), Gaps = 0/447 (0%)
Query 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL
Sbjct 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
Query 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN
Sbjct 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
Query 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR
Sbjct 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
Query 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH
Sbjct 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
Query 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST
Sbjct 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
Query 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF
Sbjct 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
Query 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ
Sbjct 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
Query 421 PGQLLEVEITDADEYDLFAKLIQIKTA 447
PGQLLEVEITDADEYDLFAKLIQIKTA
Sbjct 421 PGQLLEVEITDADEYDLFAKLIQIKTA 447
>B0V6E8 Ribosomal protein uS12 methylthiotransferase RimO [Acinetobacter
baumannii (strain AYE)]
Length=447
Score = 872 bits (2254), Expect = 0.0
Identities = 424/446 (95%), Positives = 442/446 (99%), Gaps = 0/446 (0%)
Query 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
MK+PKVGFVSLGCPKALVDSERILTQL+TEGYQVASDYDGADLVVVNTCGFIESAVQESL
Sbjct 1 MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
Query 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP+HN
Sbjct 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN 120
Query 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
PF+DLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR
Sbjct 121 PFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
Query 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
AGVKE+LVISQDTSAYGVDTKYKLDFWNGQPVKTKF+DMCEALGQLGIWVRLHYVYPYPH
Sbjct 181 AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPH 240
Query 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
VDAVIDLMAQGKILPYLDIPFQHASPR+LKLMKRPAHSENTL++IK+WREKCPNLVIRST
Sbjct 241 VDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPNLVIRST 300
Query 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
FVVGFPGETEEDFQILL+WL EAQLDRVGCFTYSPVEGATANDLPDHV EE+KQERYERF
Sbjct 301 FVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF 360
Query 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
MQVQQ+ISAA+LQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS +Q
Sbjct 361 MQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQ 420
Query 421 PGQLLEVEITDADEYDLFAKLIQIKT 446
PG +LEVEITDADEYDLFAKLI+IK+
Sbjct 421 PGDMLEVEITDADEYDLFAKLIKIKS 446
>B7H1U1 Ribosomal protein uS12 methylthiotransferase RimO [Acinetobacter
baumannii (strain AB307-0294)]
Length=447
Score = 872 bits (2254), Expect = 0.0
Identities = 424/446 (95%), Positives = 442/446 (99%), Gaps = 0/446 (0%)
Query 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
MK+PKVGFVSLGCPKALVDSERILTQL+TEGYQVASDYDGADLVVVNTCGFIESAVQESL
Sbjct 1 MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
Query 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP+HN
Sbjct 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN 120
Query 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
PF+DLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR
Sbjct 121 PFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
Query 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
AGVKE+LVISQDTSAYGVDTKYKLDFWNGQPVKTKF+DMCEALGQLGIWVRLHYVYPYPH
Sbjct 181 AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPH 240
Query 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
VDAVIDLMAQGKILPYLDIPFQHASPR+LKLMKRPAHSENTL++IK+WREKCPNLVIRST
Sbjct 241 VDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPNLVIRST 300
Query 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
FVVGFPGETEEDFQILL+WL EAQLDRVGCFTYSPVEGATANDLPDHV EE+KQERYERF
Sbjct 301 FVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF 360
Query 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
MQVQQ+ISAA+LQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS +Q
Sbjct 361 MQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQ 420
Query 421 PGQLLEVEITDADEYDLFAKLIQIKT 446
PG +LEVEITDADEYDLFAKLI+IK+
Sbjct 421 PGDMLEVEITDADEYDLFAKLIKIKS 446
>B7I9V4 Ribosomal protein uS12 methylthiotransferase RimO [Acinetobacter
baumannii (strain AB0057)]
Length=447
Score = 871 bits (2251), Expect = 0.0
Identities = 423/446 (95%), Positives = 442/446 (99%), Gaps = 0/446 (0%)
Query 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
MK+PKVGFVSLGCPKALVDSERILTQL+T+GYQVASDYDGADLVVVNTCGFIESAVQESL
Sbjct 1 MKTPKVGFVSLGCPKALVDSERILTQLKTDGYQVASDYDGADLVVVNTCGFIESAVQESL 60
Query 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP+HN
Sbjct 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN 120
Query 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
PF+DLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR
Sbjct 121 PFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
Query 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
AGVKE+LVISQDTSAYGVDTKYKLDFWNGQPVKTKF+DMCEALGQLGIWVRLHYVYPYPH
Sbjct 181 AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPH 240
Query 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
VDAVIDLMAQGKILPYLDIPFQHASPR+LKLMKRPAHSENTL++IK+WREKCPNLVIRST
Sbjct 241 VDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPNLVIRST 300
Query 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
FVVGFPGETEEDFQILL+WL EAQLDRVGCFTYSPVEGATANDLPDHV EE+KQERYERF
Sbjct 301 FVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF 360
Query 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
MQVQQ+ISAA+LQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS +Q
Sbjct 361 MQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQ 420
Query 421 PGQLLEVEITDADEYDLFAKLIQIKT 446
PG +LEVEITDADEYDLFAKLI+IK+
Sbjct 421 PGDMLEVEITDADEYDLFAKLIKIKS 446
>A3M659 Ribosomal protein uS12 methylthiotransferase RimO [Acinetobacter
baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025
/ NCDC KC755 / 5377)]
Length=447
Score = 870 bits (2249), Expect = 0.0
Identities = 423/446 (95%), Positives = 442/446 (99%), Gaps = 0/446 (0%)
Query 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
MK+PKVGFVSLGCPKALVDSERILTQL+TEGYQVASDYDGADLVVVNTCGFIESAVQESL
Sbjct 1 MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
Query 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP+HN
Sbjct 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN 120
Query 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
PF+DLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR
Sbjct 121 PFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
Query 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
AGVKE+LVISQDTSAYGVDTKYKLDFWNGQPVKTKF+DMCEALGQLGIWVRLHYVYPYPH
Sbjct 181 AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPH 240
Query 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
VDAVIDLMAQGKILPYLDIPFQHASPR+LKLMKRPAHSENTL++IK+WREKCP+LVIRST
Sbjct 241 VDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPDLVIRST 300
Query 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
FVVGFPGETEEDFQILL+WL EAQLDRVGCFTYSPVEGATANDLPDHV EE+KQERYERF
Sbjct 301 FVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF 360
Query 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
MQVQQ+ISAA+LQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS +Q
Sbjct 361 MQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQ 420
Query 421 PGQLLEVEITDADEYDLFAKLIQIKT 446
PG +LEVEITDADEYDLFAKLI+IK+
Sbjct 421 PGDMLEVEITDADEYDLFAKLIKIKS 446
>B0VMU3 Ribosomal protein uS12 methylthiotransferase RimO [Acinetobacter
baumannii (strain SDF)]
Length=447
Score = 870 bits (2249), Expect = 0.0
Identities = 423/446 (95%), Positives = 442/446 (99%), Gaps = 0/446 (0%)
Query 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
MK+PKVGFVSLGCPKALVDSERILTQL+TEGYQVASDYDGADLVVVNTCGFIESAVQESL
Sbjct 1 MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
Query 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP+HN
Sbjct 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN 120
Query 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
PF+DLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR
Sbjct 121 PFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
Query 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
AGVKE+LVISQDTSAYGVDTKYKLDFWNGQPVKTKF+DMCEALGQLGIWVRLHYVYPYPH
Sbjct 181 AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPH 240
Query 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
VDAVIDLMAQGKILPYLDIPFQHASPR+LKLMKRPAHSENTL++IK+WREKCP+LVIRST
Sbjct 241 VDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPDLVIRST 300
Query 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
FVVGFPGETEEDFQILL+WL EAQLDRVGCFTYSPVEGATANDLPDHV EE+KQERYERF
Sbjct 301 FVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF 360
Query 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
MQVQQ+ISAA+LQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS +Q
Sbjct 361 MQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQ 420
Query 421 PGQLLEVEITDADEYDLFAKLIQIKT 446
PG +LEVEITDADEYDLFAKLI+IK+
Sbjct 421 PGDMLEVEITDADEYDLFAKLIKIKS 446
>B2I330 Ribosomal protein uS12 methylthiotransferase RimO [Acinetobacter
baumannii (strain ACICU)]
Length=447
Score = 870 bits (2249), Expect = 0.0
Identities = 423/446 (95%), Positives = 442/446 (99%), Gaps = 0/446 (0%)
Query 1 MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
MK+PKVGFVSLGCPKALVDSERILTQL+TEGYQVASDYDGADLVVVNTCGFIESAVQESL
Sbjct 1 MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESL 60
Query 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHN 120
DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP+HN
Sbjct 61 DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN 120
Query 121 PFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
PF+DLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR
Sbjct 121 PFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR 180
Query 181 AGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPH 240
AGVKE+LVISQDTSAYGVDTKYKLDFWNGQPVKTKF+DMCEALGQLGIWVRLHYVYPYPH
Sbjct 181 AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPH 240
Query 241 VDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRST 300
VDAVIDLMAQGKILPYLDIPFQHASPR+LKLMKRPAHSENTL++IK+WREKCP+LVIRST
Sbjct 241 VDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPDLVIRST 300
Query 301 FVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERF 360
FVVGFPGETEEDFQILL+WL EAQLDRVGCFTYSPVEGATANDLPDHV EE+KQERYERF
Sbjct 301 FVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF 360
Query 361 MQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQ 420
MQVQQ+ISAA+LQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS +Q
Sbjct 361 MQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQ 420
Query 421 PGQLLEVEITDADEYDLFAKLIQIKT 446
PG +LEVEITDADEYDLFAKLI+IK+
Sbjct 421 PGDMLEVEITDADEYDLFAKLIKIKS 446
>Q4FRH4 Ribosomal protein uS12 methylthiotransferase RimO [Psychrobacter
arcticus (strain DSM 17307 / VKM B-2377 / 273-4)]
Length=525
Score = 669 bits (1726), Expect = 0.0
Identities = 326/442 (74%), Positives = 380/442 (86%), Gaps = 6/442 (1%)
Query 3 SPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDA 62
+PK+GFVSLGCPKALVDSERI+T+L +GYQVASDYDGADLVVVNTCGFIESAVQESLDA
Sbjct 81 APKIGFVSLGCPKALVDSERIITELSRDGYQVASDYDGADLVVVNTCGFIESAVQESLDA 140
Query 63 IGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPR---- 118
IGEA+S+NG+VIVTGCLGK+ DKIR+MHP VL VTGA AY +V+ AV +VP P R
Sbjct 141 IGEAISKNGKVIVTGCLGKEADKIREMHPAVLAVTGAHAYDEVIRAVALHVPKPDRSLDA 200
Query 119 -HNPFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAA 177
++P +DL+ E GI+LTP HYAYLKISEGCNHRCTFCIIPS+RGDLVSRP+ SV+ EA A
Sbjct 201 SYDPKIDLINEAGIKLTPSHYAYLKISEGCNHRCTFCIIPSLRGDLVSRPIDSVMNEALA 260
Query 178 LKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYP 237
LK+AGVKE+L+ISQDTSAYG+D KYK FWNG P+K+KFYD+C+AL LGIWVRLHYVYP
Sbjct 261 LKKAGVKELLIISQDTSAYGLDLKYKTSFWNGMPLKSKFYDLCQALNDLGIWVRLHYVYP 320
Query 238 YPHVDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVI 297
YPHVD V++LM + K+LPYLDIPFQHAS RILK MKRPAHSENTL RI WRE CP++VI
Sbjct 321 YPHVDKVVELMGEKKLLPYLDIPFQHASHRILKAMKRPAHSENTLARIHAWREICPDIVI 380
Query 298 RSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERY 357
RSTFVVGFPGETEEDFQ LL+WL EA+LDRVG FTYS VEGA ANDLP+HV E+VKQERY
Sbjct 381 RSTFVVGFPGETEEDFQCLLDWLVEARLDRVGAFTYSEVEGAVANDLPNHVPEDVKQERY 440
Query 358 ERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS 417
ER M +QQ+ISA +LQ++IG+T+ VLVD ++ E VA+ RSYADAPEIDG+V+V+DID +
Sbjct 441 ERLMTLQQDISAQKLQEKIGKTLMVLVDEIDREEGVAICRSYADAPEIDGHVYVDDID-A 499
Query 418 LVQPGQLLEVEITDADEYDLFA 439
V+ GQ L V I DA EYDLFA
Sbjct 500 HVKVGQFLTVTIDDASEYDLFA 521
>Q1QA11 Ribosomal protein uS12 methylthiotransferase RimO [Psychrobacter
cryohalolentis (strain ATCC BAA-1226 / DSM 17306
/ VKM B-2378 / K5)]
Length=531
Score = 667 bits (1720), Expect = 0.0
Identities = 325/442 (74%), Positives = 379/442 (86%), Gaps = 6/442 (1%)
Query 3 SPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDA 62
+PK+GFVSLGCPKALVDSERI+T+L +GYQVASDY+GADLVVVNTCGFIESAVQESLDA
Sbjct 87 APKIGFVSLGCPKALVDSERIITELSRDGYQVASDYEGADLVVVNTCGFIESAVQESLDA 146
Query 63 IGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP----- 117
IGEA+S+NG+VIVTGCLGK+ DKIR+MHP VL VTGA AY DV+ AV +VP P
Sbjct 147 IGEAISKNGKVIVTGCLGKEADKIREMHPAVLAVTGAHAYDDVIRAVALHVPKPDCGLDA 206
Query 118 RHNPFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAA 177
++P +DL+ E GI+LTP HYAYLKISEGCNHRCTFCIIPS+RGDLVSRP+ SV+ EA A
Sbjct 207 SYDPKIDLINEAGIKLTPSHYAYLKISEGCNHRCTFCIIPSLRGDLVSRPIDSVMNEALA 266
Query 178 LKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYP 237
LK+AGVKE+L+ISQDTSAYG+D KYK FWNG P+K+KFYD+C+AL LGIWVRLHYVYP
Sbjct 267 LKKAGVKELLIISQDTSAYGLDLKYKTSFWNGMPLKSKFYDLCQALNDLGIWVRLHYVYP 326
Query 238 YPHVDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVI 297
YPHVD V++LM + K+LPYLDIPFQHAS RILK MKRPAHSENTL RI WRE CP++VI
Sbjct 327 YPHVDKVVELMGEKKLLPYLDIPFQHASHRILKAMKRPAHSENTLARIHAWREICPDIVI 386
Query 298 RSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERY 357
RSTFVVGFPGETEEDFQ LL+WL EA+LDRVG FTYS VEGA ANDLP+HV E+VKQERY
Sbjct 387 RSTFVVGFPGETEEDFQCLLDWLVEARLDRVGAFTYSEVEGAVANDLPNHVPEDVKQERY 446
Query 358 ERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKS 417
ER M +QQ+ISA +LQ++IG+T+ VLVD ++ E VA+ RSYADAPEIDG+V+V+DID +
Sbjct 447 ERLMTLQQDISAQKLQEKIGKTLMVLVDEIDREEGVAICRSYADAPEIDGHVYVDDID-A 505
Query 418 LVQPGQLLEVEITDADEYDLFA 439
V+ GQ L V I DA EYDLFA
Sbjct 506 HVKVGQFLTVTIDDASEYDLFA 527
>A5F514 Ribosomal protein uS12 methylthiotransferase RimO [Vibrio
cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa
395 / O395)]
Length=470
Score = 645 bits (1664), Expect = 0.0
Identities = 310/438 (71%), Positives = 369/438 (84%), Gaps = 5/438 (1%)
Query 5 KVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIG 64
K+GFVSLGCPK LVDSERILTQLRTEGY++ + Y +D+V+VNTCGFI+SAVQESLD IG
Sbjct 34 KIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIG 93
Query 65 EAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHNPFVD 124
EA+ ENG+VIVTGCLG ED+IRQ+HPNVL +TG AYQ+V+E VH+Y P P HNPF
Sbjct 94 EALKENGKVIVTGCLGAREDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKPA-HNPFTS 152
Query 125 LVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVK 184
LVP+ G++LTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVG ++ EA LK AGVK
Sbjct 153 LVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVK 212
Query 185 EVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVDAV 244
E+LVISQDTSAYGVDTK+ L F NG PV+ + E LG++GIWVRLHYVYPYPHVD +
Sbjct 213 ELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEI 272
Query 245 IDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTFVVG 304
I LMA+GK+LPYLDIPFQHASPR+LK+MKRP +E TL+RIK WRE CP LVIRSTF+VG
Sbjct 273 IPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVG 332
Query 305 FPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERFMQVQ 364
FPGETEEDFQILL+WLKEAQLDRVGCF YSPVEGA AN++ D + E+VKQ+R+ERFM VQ
Sbjct 333 FPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFMLVQ 392
Query 365 QEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQPGQL 424
QEISAA+LQKRIG TM VL+D ++DE A+ R+YADAPEIDG V++ ++ ++PG+L
Sbjct 393 QEISAAKLQKRIGSTMQVLIDEVDDE--GAIGRTYADAPEIDGLVYLN--GETNLKPGEL 448
Query 425 LEVEITDADEYDLFAKLI 442
+ V I ADEYDL+ ++
Sbjct 449 VNVVIEHADEYDLWGSVL 466
>Q9KNW0 Ribosomal protein uS12 methylthiotransferase RimO [Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=470
Score = 644 bits (1661), Expect = 0.0
Identities = 309/438 (71%), Positives = 369/438 (84%), Gaps = 5/438 (1%)
Query 5 KVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIG 64
K+GFVSLGCPK LVDSERILTQLRTEGY++ + Y +D+V+VNTCGFI+SAVQESLD IG
Sbjct 34 KIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIG 93
Query 65 EAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHNPFVD 124
EA+ ENG+VIVTGCLG ED+IRQ+HPNVL +TG AYQ+V+E VH+Y P P HNPF
Sbjct 94 EALKENGKVIVTGCLGAREDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKPA-HNPFTS 152
Query 125 LVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVK 184
LVP+ G++LTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVG ++ EA LK AGVK
Sbjct 153 LVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVK 212
Query 185 EVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVDAV 244
E+LVISQDTSAYGVDTK+ L F NG PV+ + E LG++GIWVRLHYVYPYPHVD +
Sbjct 213 ELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEI 272
Query 245 IDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTFVVG 304
I LMA+GK+LPYLDIPFQHASPR+LK+MKRP +E TL+RIK WRE CP LVIRSTF+VG
Sbjct 273 IPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVG 332
Query 305 FPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERFMQVQ 364
FPGETEEDFQILL+WLKEAQLDRVGCF YSPVEGA AN++ D + E+VKQ+R+ERFM VQ
Sbjct 333 FPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFMLVQ 392
Query 365 QEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQPGQL 424
QEISAA+LQKRIG TM VL+D +++E A+ R+YADAPEIDG V++ ++ ++PG+L
Sbjct 393 QEISAAKLQKRIGSTMQVLIDEVDEE--GAIGRTYADAPEIDGLVYLN--GETNLKPGEL 448
Query 425 LEVEITDADEYDLFAKLI 442
+ V I ADEYDL+ ++
Sbjct 449 VNVVIEHADEYDLWGSIL 466
>A5WGF2 Ribosomal protein uS12 methylthiotransferase RimO [Psychrobacter
sp. (strain PRwf-1)]
Length=524
Score = 640 bits (1650), Expect = 0.0
Identities = 311/450 (69%), Positives = 377/450 (84%), Gaps = 13/450 (3%)
Query 3 SPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDA 62
+PKVGFVSLGCPKALVDSERI+T+L +GY+VASDY+GADLVVVNTCGFIESAVQESLDA
Sbjct 66 APKVGFVSLGCPKALVDSERIITELTRDGYRVASDYNGADLVVVNTCGFIESAVQESLDA 125
Query 63 IGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPR---- 118
IGEA+++NG+VIVTGCLGKD KIR MHP VL VTGA AY +V+ AV + P P
Sbjct 126 IGEALNKNGKVIVTGCLGKDAQKIRDMHPAVLAVTGAHAYDEVITAVSTHAPMPQAIQDK 185
Query 119 --HNPFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAA 176
++P +DL+ G++LTP HYAYLKISEGCNHRCTFCIIPS+RGDL+SRP+ V+ EA
Sbjct 186 KAYDPKIDLIDLAGVKLTPSHYAYLKISEGCNHRCTFCIIPSLRGDLLSRPIEQVMGEAM 245
Query 177 ALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVY 236
ALK+AGVKE+LVISQDTSAYGVD KYK FW+G P+K+KF+DMC+AL ++GIWVRLHYVY
Sbjct 246 ALKKAGVKEILVISQDTSAYGVDLKYKTSFWDGMPLKSKFFDMCQALAKVGIWVRLHYVY 305
Query 237 PYPHVDAVIDLMAQ----GKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKC 292
PYPHVD V++LMA+ G +LPYLDIP QHASP +LK MKRPAHSENTL RI+ WRE
Sbjct 306 PYPHVDKVVELMAKPGDRGGLLPYLDIPLQHASPSVLKAMKRPAHSENTLARIQKWREIN 365
Query 293 PNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEV 352
P++VIRSTFVVGFPGETEEDF+ LLEWLK+A+LDRVGCFTYS +EGA ANDLP+ V E +
Sbjct 366 PDIVIRSTFVVGFPGETEEDFEYLLEWLKQAKLDRVGCFTYSEIEGAVANDLPNPVPEAI 425
Query 353 KQERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVE 412
KQERYERFM VQQ+IS +LQ+++G+TMTVLVD ++ E +A+ RSYADAPEIDG+V+V+
Sbjct 426 KQERYERFMAVQQQISEQKLQEKVGKTMTVLVDEIDTEEQIAICRSYADAPEIDGHVYVD 485
Query 413 DIDKS---LVQPGQLLEVEITDADEYDLFA 439
+I ++ +V+ G +L V I +A EYDLFA
Sbjct 486 NIVQNGMMMVKVGDMLTVTIDEASEYDLFA 515
>Q7NYA1 Ribosomal protein uS12 methylthiotransferase RimO [Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM
1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)]
Length=438
Score = 639 bits (1648), Expect = 0.0
Identities = 314/439 (72%), Positives = 371/439 (85%), Gaps = 5/439 (1%)
Query 2 KSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLD 61
K+P+VGFVSLGCPKA DSE+ILT+LR EGY++A YDGADLVVVNTCGFI+SAV+ESLD
Sbjct 3 KTPRVGFVSLGCPKAASDSEQILTRLRAEGYEIAPSYDGADLVVVNTCGFIDSAVEESLD 62
Query 62 AIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHNP 121
AIGEA++ENG+VIVTGCLG D +R +HP+VL VTG A ++VM AVH ++P P H+P
Sbjct 63 AIGEALNENGKVIVTGCLGAKGDVVRDVHPSVLAVTGPHATEEVMSAVHTHLPKP--HDP 120
Query 122 FVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRA 181
FVDLVP+ G+RLTPKHYAYLKISEGCNHRCTFCIIPSMRGDL SRP+ VL EA +L +A
Sbjct 121 FVDLVPDIGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLESRPIHDVLREAESLAKA 180
Query 182 GVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHV 241
GVKE+LVISQDTSAYGVDTKYKL F NG+PVKT+ ++CE LG+ GIWVRLHYVYPYPHV
Sbjct 181 GVKEILVISQDTSAYGVDTKYKLGFHNGRPVKTRMTELCEELGRHGIWVRLHYVYPYPHV 240
Query 242 DAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTF 301
D VI LM GKILPYLDIPFQHAS ++LKLMKRPA+S+N L RIK WRE CP LVIRSTF
Sbjct 241 DEVIPLMRDGKILPYLDIPFQHASQKVLKLMKRPANSDNVLARIKKWREICPELVIRSTF 300
Query 302 VVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERFM 361
+VGFPGETEEDF+ LL +++EA+LDRVGCFTYSPVEGATAN+LP+ V E+VK+ R ERFM
Sbjct 301 IVGFPGETEEDFEELLAFIREAELDRVGCFTYSPVEGATANELPNPVPEDVKEARKERFM 360
Query 362 QVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQP 421
VQ EISA RL++R+GQT+ VLVD ++DE AV RSYADAPEIDG VFVE D + +QP
Sbjct 361 AVQAEISARRLERRVGQTLQVLVDEIDDE-GTAVCRSYADAPEIDGLVFVE--DAAGMQP 417
Query 422 GQLLEVEITDADEYDLFAK 440
G+ +VEI D E+DL+ +
Sbjct 418 GEFYQVEIVDCSEHDLWGE 436
>P0AEI4 Ribosomal protein uS12 methylthiotransferase RimO [Escherichia
coli (strain K12)]
Length=441
Score = 627 bits (1618), Expect = 0.0
Identities = 302/439 (69%), Positives = 364/439 (83%), Gaps = 5/439 (1%)
Query 4 PKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAI 63
PK+GFVSLGCPK LVDSERILT+LRTEGY V YD AD+V+VNTCGFI+SAVQESL+AI
Sbjct 8 PKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAI 67
Query 64 GEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHNPFV 123
GEA++ENG+VIVTGCLG ED+IR++HP VL++TG +Y+ V+E VH YVP P +HNPF+
Sbjct 68 GEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP-KHNPFL 126
Query 124 DLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGV 183
LVPEQG++LTP+HYAYLKISEGCNHRCTFCIIPSMRGDLVSRP+G VL EA L AGV
Sbjct 127 SLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKRLVDAGV 186
Query 184 KEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVDA 243
KE+LVISQDTSAYGVD K++ F NG+PVKT +CE L +LGIW RLHYVYPYPHVD
Sbjct 187 KEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYPYPHVDD 246
Query 244 VIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTFVV 303
VI LMA+GKILPYLDIP QHASPRILKLMKRP + L RIK WRE CP L +RSTF+V
Sbjct 247 VIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTLRSTFIV 306
Query 304 GFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERFMQV 363
GFPGETEEDFQ+LL++LKEA+LDRVGCF YSPVEGA AN LPD V EEVK+ER+ RFMQ+
Sbjct 307 GFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERWNRFMQL 366
Query 364 QQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQPGQ 423
QQ+ISA RLQ+++G+ + V++D +++E A+ RS ADAPEIDG V++ ++ V+PG
Sbjct 367 QQQISAERLQEKVGREILVIIDEVDEE--GAIGRSMADAPEIDGAVYLN--GETNVKPGD 422
Query 424 LLEVEITDADEYDLFAKLI 442
+L V++ ADEYDL+ +
Sbjct 423 ILRVKVEHADEYDLWGSRV 441
>Q55803 Ribosomal protein uS12 methylthiotransferase RimO [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=443
Score = 295 bits (756), Expect = 4e-99
Identities = 169/445 (38%), Positives = 260/445 (58%), Gaps = 22/445 (5%)
Query 2 KSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLD 61
++P + LGC K +DSE +L L GYQV ++ + AD V+VNTC FI+ A QES+
Sbjct 3 QTPTIAINHLGCEKNRIDSEHMLGLLVEAGYQVDANEELADYVIVNTCSFIQDARQESVR 62
Query 62 AIGEAMSENGRVIVTGCLGKD-EDKIRQMHPNVLKVTGAAAYQDVMEAVH--EYVPAPPR 118
+ E +++++GCL + ++++ + P + V G YQ++++ + E
Sbjct 63 TLVELAEAKKKIVISGCLAQHFQEQLLEEIPEAVAVVGTGDYQNIVDIIRRTEQGQRVKA 122
Query 119 HNPFVDLVPEQGI---RLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEA 175
+P + ++ + R T + AYL+++EGC++RC FCIIP +RG SRP+ S++ EA
Sbjct 123 ISPNPSFIADENLPRYRTTNEAIAYLRVAEGCDYRCAFCIIPQLRGKQRSRPIESIVAEA 182
Query 176 AALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGI-WVRLHY 234
L GVKE+++ISQ T+ YG+D G+P K ++ +ALG++ I W+R+HY
Sbjct 183 EQLASQGVKELILISQITTNYGLDLY-------GEP---KLAELLQALGKVDIPWIRIHY 232
Query 235 VYPYPHVDAVIDLMAQG-KILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCP 293
YP VI+ + +LPYLD+P QH+ P IL+ M RP + D I + P
Sbjct 233 AYPTGLTPKVIEAIRDTPNVLPYLDLPLQHSHPDILRAMNRPWQGQVNDDIITRLKTALP 292
Query 294 NLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVK 353
+ V+R+TF+VGFPGETEE F LL++++ Q D VG FT+SP EG A DLP+ V EEV
Sbjct 293 DAVLRTTFIVGFPGETEEHFGHLLDFVQRHQFDHVGVFTFSPEEGTAAFDLPNAVPEEVM 352
Query 354 QERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVED 413
+R +R M +QQ ISA + +GQT+ VL++ + RS APE+DG V+V
Sbjct 353 GDRRDRLMALQQPISAQKNAACLGQTLDVLIEQENPSTGEFIGRSTRFAPEVDGLVYV-- 410
Query 414 IDKSLVQPGQLLEVEITDADEYDLF 438
K +++ V IT D+YDL+
Sbjct 411 --KGNANLNEIVPVVITATDDYDLY 433
>Q9X2H6 Ribosomal protein uS12 methylthiotransferase RimO [Thermotoga
maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 /
NBRC 100826 / MSB8)]
Length=430
Score = 270 bits (689), Expect = 3e-89
Identities = 164/455 (36%), Positives = 256/455 (56%), Gaps = 43/455 (9%)
Query 5 KVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIG 64
+VG LGCPK D E + LR G+++ D AD+VV++TC FIE A +ES+D I
Sbjct 2 RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIF 61
Query 65 ---EAMSENG-RVIVTGCL-GKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRH 119
+A + G +++V GCL + +++++ P V + G A +++ A+
Sbjct 62 SFVDAKDQYGYKLVVKGCLVQRYYEELKKEIPEVDQWIGVADPEEIANAIENGT------ 115
Query 120 NPFVDLVPEQG---------IRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGS 170
DLVP+Q I L + YAY+KIS+GC+ CTFC IPS +G L SR +
Sbjct 116 ----DLVPDQPETVYRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIED 171
Query 171 VLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLG--I 228
+ E L + G KE+++++QDT++YG+D Y+ K D+ L L
Sbjct 172 ITREVEDLLKEGKKEIILVAQDTTSYGIDL-YR---------KQALPDLLRRLNSLNGEF 221
Query 229 WVRLHYVYPYPHVDAVIDLMAQ-GKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKV 287
W+R+ Y++P + +I M + K++ Y D+P QH S +ILKLM R SE +
Sbjct 222 WIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSS 281
Query 288 WREKCPNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDH 347
RE+ P+ V+R++ +VGFPGETEEDF+ L ++++E Q D++G F YS EG A +L +
Sbjct 282 IRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEK 341
Query 348 VSEEVKQERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDG 407
V E+ + R E + +Q EIS +RL + +G+ + LV+ E ++ V R++ +APE+DG
Sbjct 342 VDPEMAKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGKF--LVGRTWTEAPEVDG 399
Query 408 NVFVEDIDKSLVQPGQLLEVEITDADEYDLFAKLI 442
VFV K G LEV I + DEYD++ +I
Sbjct 400 VVFVRGKGKI----GDFLEVVIKEHDEYDMWGSVI 430
>Q9ZEN7 Ribosomal protein uS12 methylthiotransferase RimO [Wolinella
succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466
/ NCTC 11488 / FDC 602W)]
Length=439
Score = 206 bits (523), Expect = 2e-64
Identities = 138/420 (33%), Positives = 228/420 (54%), Gaps = 24/420 (6%)
Query 3 SPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDA 62
S K+ +SLGC K LVDSE +L +L++ Y++ + AD+++VNTCGFIE+A QESL
Sbjct 2 SKKLHLISLGCTKNLVDSEVMLGRLKS--YEITPLIEKADVIIVNTCGFIEAAKQESLSV 59
Query 63 IGEAMSENGR---VIVTGCLGK--DEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP 117
+ EA+ + ++ +GCL + E+ +R++ P + +TG Y + + V E
Sbjct 60 LFEALERRKKGAILVASGCLSERYHEELLREI-PEIDIITGVGDYDKIDQMVRE---RQG 115
Query 118 RHNPFVDLVPEQGIRLTPKH--YAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEA 175
H+ V L E+ R+ +AY+K+SEGCN C+FC IP +G L SR + S L+E
Sbjct 116 FHSGEVFLASEEQERVITGSSVHAYVKLSEGCNQTCSFCAIPQFKGKLHSRTLESTLKEV 175
Query 176 AALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYV 235
L G + I+QDTS+Y D K G D E + R+ Y+
Sbjct 176 KNLIAKGFTDFSFIAQDTSSYLRDRGEK----EGLIQLIGALDSLEGIKS----ARILYL 227
Query 236 YPYPHVDAVIDLMAQGKILP-YLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPN 294
YP +I + + +++ Y D+P QH + +LK MKR A+ + + ++ R+ P+
Sbjct 228 YPSTASAKLIQAIQKSQVVQNYFDMPLQHIAESMLKRMKRGANQKKHKELLERMRQ-VPH 286
Query 295 LVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQ 354
+R+T ++G PGE+EE+F+ L +L+E + DRV F YS EG +A+ + + + V
Sbjct 287 SFVRTTLILGHPGESEEEFEELCRFLEEFRFDRVNLFAYSDEEGTSAHKMEGKLDKRVIN 346
Query 355 ERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAV-ARSYADAPEIDGNVFVED 413
R +R ++ Q+ A L++ +GQ + V+++ E+ AR APEIDG + + +
Sbjct 347 ARLKRLDKIIQKQHRALLKEMVGQEIPVILEGGSSEHEFFYSARDARWAPEIDGEILINE 406
>D5ZT17 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
[Streptomyces viridosporus (strain ATCC 14672 / DSM 40746 /
JCM 4963 / KCTC 9882 / NRRL B-12104 / FH 1290)]
Length=505
Score = 186 bits (473), Expect = 1e-56
Identities = 144/453 (32%), Positives = 215/453 (47%), Gaps = 45/453 (10%)
Query 12 GCPKALVDSERILTQLRTEGYQVASD-YDG-ADLVVVNTCGFIESAVQESLDAIGEAMSE 69
GC + DSER+ L GY A + DG AD+VV NTC E+A + +G +
Sbjct 22 GCQMNVHDSERLAGLLEDAGYVRAPEGSDGDADVVVFNTCAVRENADNKLYGNLGHLAPK 81
Query 70 NGR-----VIVTGCLG-KDEDKIRQMHPNVLKVTG-------------AAAYQDVMEAVH 110
R + V GCL KD D I + P V V G A ++ +
Sbjct 82 KARRPGMQIAVGGCLAQKDRDTIVKRAPWVDVVFGTHNIGKLPVLLERARVQEEAQVEIA 141
Query 111 EYVPAPPRHNPFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGS 170
E + A P P R + A++ IS GCN+ CTFCI+P++RG R G
Sbjct 142 ESLEAFPSTLP---------TRRESAYAAWVSISVGCNNTCTFCIVPALRGKEKDRRPGD 192
Query 171 VLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWV 230
+L E AL GV E+ ++ Q+ +AYG D + F + A G++
Sbjct 193 ILAEIEALVAEGVSEITLLGQNVNAYGSDIGDR----------EAFSKLLRACGRIDGLE 242
Query 231 RLHYVYPYPH--VDAVIDLMAQG-KILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKV 287
R+ + P+P D VI MA+ ++P L +P Q S +LK M+R E L I+
Sbjct 243 RVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDAVLKAMRRSYRQERYLGIIEK 302
Query 288 WREKCPNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDH 347
R P+ I + +VGFPGETEEDF+ L ++EA+ + F YS G A ++
Sbjct 303 VRAAIPHAAISTDIIVGFPGETEEDFEQTLHVVREARFAQAFTFQYSKRPGTPAAEMDGQ 362
Query 348 VSEEVKQERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDG 407
+ ++V QERYER + +Q+EIS +K++G+T+ ++V E R AP D
Sbjct 363 IPKKVVQERYERLVALQEEISWEENKKQVGRTLELMVAEGEGRKDDTTHRLSGRAP--DN 420
Query 408 NVFVEDIDKSLVQPGQLLEVEITDADEYDLFAK 440
+ + V+PG ++ VEIT A + L A+
Sbjct 421 RLVHFTKPEQEVRPGDVVTVEITYAAPHHLLAE 453
>Q9WZC1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
[Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099
/ NBRC 100826 / MSB8)]
Length=443
Score = 165 bits (417), Expect = 4e-49
Identities = 120/386 (31%), Positives = 190/386 (49%), Gaps = 18/386 (5%)
Query 10 SLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMS- 68
+ GC DSE + L EG+ AS + AD+V++NTC + +++ +G+ +
Sbjct 7 TFGCQMNENDSEAMAGLLVKEGFTPASSPEEADVVIINTCAVRRKSEEKAYSELGQVLKL 66
Query 69 ENGRVIVTGCLGKDEDKIRQ--MHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHNPFVDLV 126
+ + IV G G +K R+ + V G A V EAV + + + F D +
Sbjct 67 KKKKKIVVGVAGCVAEKEREKFLEKGADFVLGTRAVPRVTEAVKKALEGE-KVALFEDHL 125
Query 127 PEQGIRL----TPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAG 182
E L T +H+A++ I GC+ CT+CI+P RG SRP+ +LEE L G
Sbjct 126 DEYTHELPRIRTSRHHAWVTIIHGCDRFCTYCIVPYTRGRERSRPMADILEEVKKLAEQG 185
Query 183 VKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVD 242
+EV + Q+ AYG D K +G + + + G IW Y P D
Sbjct 186 YREVTFLGQNVDAYGKDLK------DGSSLAKLLEEASKIEGIERIWFLTSY--PTDFSD 237
Query 243 AVIDLMAQG-KILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTF 301
+I+++A+ K+ + +P Q S RILKLM R E L ++ R K P + I S
Sbjct 238 ELIEVIAKNPKVAKSVHLPVQSGSNRILKLMNRRYTKEEYLALLEKIRSKVPEVAISSDI 297
Query 302 VVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATA-NDLPDHVSEEVKQERYERF 360
+VGFP ETEEDF ++ +++AQ +R+ YSP EG A D V E K R +
Sbjct 298 IVGFPTETEEDFMETVDLVEKAQFERLNLAIYSPREGTVAWKYYKDDVPYEEKVRRMQFL 357
Query 361 MQVQQEISAARLQKRIGQTMTVLVDS 386
M +Q+ I+ ++ G+T+ ++V++
Sbjct 358 MNLQKRINRKLNERYRGKTVRIIVEA 383
>O31778 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
[Bacillus subtilis (strain 168)]
Length=509
Score = 156 bits (394), Expect = 2e-45
Identities = 112/402 (28%), Positives = 198/402 (49%), Gaps = 29/402 (7%)
Query 12 GCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIG--EAMSE 69
GC D+E + GY+ + D A+++++NTC E+A + +G +A+ +
Sbjct 74 GCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENKVFGELGHLKALKK 133
Query 70 NGRVI---VTGCLGKDE---DKIRQMHPNVLKVTGAAAYQDVMEAVHE-------YVPAP 116
N + V GC+ ++E ++I + HP V + G + E + E V
Sbjct 134 NNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLSEAYLSKEMVVEVW 193
Query 117 PRHNPFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAA 176
+ ++ +P+ +R K ++ I GC+ CT+CI+P RG SR +++E
Sbjct 194 SKEGDVIENLPK--VR-NGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEVR 250
Query 177 ALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGI-WVRLHYV 235
L G KE+ ++ Q+ +AYG D + D G D+ + L ++ I +R
Sbjct 251 RLASEGYKEITLLGQNVNAYGKDFE---DMTYG------LGDLMDELRKIDIPRIRFTTS 301
Query 236 YPYPHVDAVIDLMAQG-KILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPN 294
+P D +I+++A+G +L ++ +P Q S +LKLM R E ++ ++ +E PN
Sbjct 302 HPRDFDDRLIEVLAKGGNLLDHIHLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMPN 361
Query 295 LVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQ 354
+ + +VGFP ET+E F+ L +E + D F YSP EG A + D+V VK+
Sbjct 362 ASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVKK 421
Query 355 ERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVA 396
ER +R + EISA ++++ G+ + VLV+ P +A
Sbjct 422 ERLQRLNALVNEISAKKMKEYEGKVVEVLVEGESKNNPDILA 463
>P54462 Threonylcarbamoyladenosine tRNA methylthiotransferase
MtaB [Bacillus subtilis (strain 168)]
Length=451
Score = 154 bits (390), Expect = 3e-45
Identities = 111/372 (30%), Positives = 175/372 (47%), Gaps = 17/372 (5%)
Query 6 VGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGE 65
V F +LGC ++E I + GY+ AD+ V+NTC + ++S I
Sbjct 4 VAFHTLGCKVNHYETEAIWQLFKEAGYERRDFEQTADVYVINTCTVTNTGDKKSRQVIRR 63
Query 66 AMSEN--GRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHNPFV 123
A+ +N G + VTGC + P V V G + ++ + +Y N
Sbjct 64 AIRQNPDGVICVTGCYAQTSPAEIMAIPGVDIVVGTQDREKMLGYIDQYREERQPINGVS 123
Query 124 DLVPEQGIR------LTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAA 177
+++ + T + A LKI EGCN+ CTFCIIP RG L SR V+++A
Sbjct 124 NIMKARVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLLRSRDPEEVIKQAQQ 183
Query 178 LKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYP 237
L AG KE+++ T YG D K +N + ++ E + + +R+ +
Sbjct 184 LVDAGYKEIVLTGIHTGGYGEDMKD----YNFAKLLSELDTRVEGVKR----IRISSIEA 235
Query 238 YPHVDAVIDLMAQG-KILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLV 296
D VI+++ + KI+ +L IP Q S +LK M+R E DR+ ++ P L
Sbjct 236 SQITDEVIEVLDRSDKIVNHLHIPIQSGSNTVLKRMRRKYTMEFFADRLNKLKKALPGLA 295
Query 297 IRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQER 356
+ S +VGFPGETEE+F ++KE + + F YS G A + D V E VK ER
Sbjct 296 VTSDVIVGFPGETEEEFMETYNFIKEHKFSELHVFPYSKRTGTPAARMEDQVDENVKNER 355
Query 357 YERFMQVQQEIS 368
R + + +++
Sbjct 356 VHRLIALSDQLA 367
>Q9L699 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
[Pasteurella multocida (strain Pm70)]
Length=474
Score = 143 bits (360), Expect = 7e-41
Identities = 128/460 (28%), Positives = 206/460 (45%), Gaps = 43/460 (9%)
Query 5 KVGFVSLGCPKALVDSERILTQLR-TEGYQVASDYDGADLVVVNTCGFIESAVQESLDAI 63
K+ + GC DS ++ L T G ++ + AD++++NTC E A ++ +
Sbjct 4 KLHIKTWGCQMNEYDSSKMADLLNSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query 64 GE----AMSENGRVI-VTGCLGKDE-DKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAP- 116
G + G VI V GC+ E + IR P V + G + E +++
Sbjct 64 GRWKELKKHKPGLVIGVGGCVASQEGEHIRTRAPYVDIIFGPQTLHRLPEMINQIRGGKS 123
Query 117 -------PRHNPFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVG 169
P F D +PE A++ I EGCN C+FC++P RG+ VSRPV
Sbjct 124 SVVDVSFPEIEKF-DRLPEPRAEGPT---AFVSIMEGCNKYCSFCVVPYTRGEEVSRPVD 179
Query 170 SVLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIW 229
VL E A L GV+EV ++ Q+ +AY T + + T F ++ + +
Sbjct 180 DVLFEIAQLAEQGVREVNLLGQNVNAYRGAT-------HDDGICT-FAELLRLVAAIDGI 231
Query 230 VRLHYV--YPYPHVDAVIDLMAQG-KILPYLDIPFQHASPRILKLMKRPAHSENTLDRIK 286
RL + +P D +ID+ +++ +L +P Q S R+L +MKR + I+
Sbjct 232 DRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQSGSDRVLSMMKRNHTALEYKSIIR 291
Query 287 VWREKCPNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPD 346
R P + I S F+VGFPGET EDF+ + + + D F YS G A D+PD
Sbjct 292 KLRAVRPEIQISSDFIVGFPGETAEDFEQTMNLIAQVNFDMSFSFIYSARPGTPAADMPD 351
Query 347 HVSEEVKQERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEID 406
V+EE K++R Q +A + +G VLV+ S D E+
Sbjct 352 DVTEEEKKQRLYVLQQRINNQAAQFSRAMLGTEQRVLVE----------GPSKKDLMELT 401
Query 407 GNVFVEDIDKSLVQP---GQLLEVEITDADEYDLFAKLIQ 443
G I + P G+ ++++ITD L ++++
Sbjct 402 GRTETNRIVNFVGTPDMIGKFVDIKITDVFTNSLRGEVVR 441
>P0AEI1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
[Escherichia coli (strain K12)]
Length=474
Score = 140 bits (353), Expect = 7e-40
Identities = 123/456 (27%), Positives = 208/456 (46%), Gaps = 35/456 (8%)
Query 5 KVGFVSLGCPKALVDSERILTQL-RTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAI 63
K+ + GC DS ++ L T GYQ+ + AD++++NTC E A ++ +
Sbjct 4 KLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVFHQL 63
Query 64 GE---AMSENGRVI--VTGCLGKDE-DKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPP 117
G +N +I V GC+ E + IRQ V + G + E ++
Sbjct 64 GRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINS---VRG 120
Query 118 RHNPFVDLV---PEQGIRLTPKHY----AYLKISEGCNHRCTFCIIPSMRGDLVSRPVGS 170
+P VD+ E+ RL A++ I EGCN CT+C++P RG+ VSRP
Sbjct 121 DRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDD 180
Query 171 VLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWV 230
+L E A L GV+EV ++ Q+ +A+ + N F D+ + +
Sbjct 181 ILFEIAQLAAQGVREVNLLGQNVNAWRGE--------NYDGTTGSFADLLRLVAAIDGID 232
Query 231 RLHYV--YPYPHVDAVIDLMAQG-KILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKV 287
R+ + +P D +I++ +++ +L +P Q S RIL LM R + I+
Sbjct 233 RIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRK 292
Query 288 WREKCPNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDH 347
R P++ I S F+VGFPGET EDF+ ++ + + D F +S G A D+ D
Sbjct 293 LRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDD 352
Query 348 VSEEVKQERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDG 407
V EE K++R + + + A ++ +G T +LV+ +S +
Sbjct 353 VPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGTS-------RKSIMELSGRTE 405
Query 408 NVFVEDIDKSLVQPGQLLEVEITDADEYDLFAKLIQ 443
N V + + + G+ ++VEITD L K+++
Sbjct 406 NNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVR 441
Lambda K H a alpha
0.320 0.137 0.409 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3724876
Database: 076710abbfc39de7de16f938be8a3977.SwissProt.fasta
Posted date: May 20, 2024 9:58 AM
Number of letters in database: 10,696
Number of sequences in database: 23
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
