BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 997dc9614d03a1645d56129d1a23eb4b.SwissProt.fasta
23 sequences; 6,024 total letters
Query= ACIAD1374
Length=250
Score E
Sequences producing significant alignments: (Bits) Value
Q6FCH1 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 506 0.0
Q8PMK9 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 237 8e-82
Q5H1E5 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 235 3e-81
Q8ZRP2 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 233 2e-80
Q5PD68 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 233 2e-80
Q8Z9A5 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 231 9e-80
Q8PAV7 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 231 1e-79
P60475 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 231 2e-79
P60473 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 231 2e-79
P60474 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 231 2e-79
P60472 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 231 2e-79
Q88MH6 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 228 1e-78
Q87ME1 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 227 6e-78
Q886N9 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 225 3e-77
Q8GLK9 Isoprenyl transferase [Aquifex pyrophilus] 197 1e-66
K4D3U9 Cis-prenyltransferase 4, chloroplastic [Solanum lycopersicum] 195 1e-64
A8B1Z2 Di-trans,poly-cis-undecaprenyl-diphosphate synthase [Giard... 188 2e-62
P55984 Isoprenyl transferase [Helicobacter pylori (strain ATCC 70... 184 1e-61
O82827 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)... 184 4e-61
K7W9N9 (2Z,6Z)-farnesyl diphosphate synthase CPT6, chloroplastic ... 184 1e-60
K7X479 Dehydrodolichyl diphosphate synthase CPT5, chloroplastic [... 184 1e-60
Q47RM6 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-far... 180 2e-59
K7WQ45 Nerylneryl diphosphate synthase CPT2, chloroplastic [Solan... 177 1e-57
>Q6FCH1 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=249
Score = 506 bits (1302), Expect = 0.0
Identities = 249/249 (100%), Positives = 249/249 (100%), Gaps = 0/249 (0%)
Query 1 MTLSEESHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVF 60
MTLSEESHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVF
Sbjct 1 MTLSEESHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVF 60
Query 61 AFSSENWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAE 120
AFSSENWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAE
Sbjct 61 AFSSENWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAE 120
Query 121 NETAHFTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPP 180
NETAHFTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPP
Sbjct 121 NETAHFTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPP 180
Query 181 VDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSE 240
VDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSE
Sbjct 181 VDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSE 240
Query 241 QIQQDKIEN 249
QIQQDKIEN
Sbjct 241 QIQQDKIEN 249
>Q8PMK9 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Xanthomonas axonopodis
pv. citri (strain 306)]
Length=257
Score = 237 bits (604), Expect = 8e-82
Identities = 121/241 (50%), Positives = 159/241 (66%), Gaps = 0/241 (0%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+P+H+AIIMDGN R+A++ + + GHR G +++ ++ C +GV ALT+FAFSSENW
Sbjct 14 VPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWG 73
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
RP EVD LMKL A+ ++ +++ + +RFIGDRS+ + L D M AE TA +
Sbjct 74 RPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANSR 133
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTG 188
+ L+IA SYGG DI AA+ +A+DV+ G + EQID L V+L LP DL IRTG
Sbjct 134 LVLSIAASYGGRQDIASAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTG 193
Query 189 GDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQIQQDKIE 248
GD R+SNFLLWQ AY EL+FTETLWPEF AL +AGRERRFG TS QI E
Sbjct 194 GDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQIADKATE 253
Query 249 N 249
+
Sbjct 254 S 254
>Q5H1E5 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Xanthomonas oryzae pv.
oryzae (strain KACC10331 / KXO85)]
Length=258
Score = 235 bits (600), Expect = 3e-81
Identities = 121/240 (50%), Positives = 157/240 (65%), Gaps = 0/240 (0%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+P+H+AIIMDGN R+A++ + + GHR G +++ ++ C +GV ALT+FAFSSENW
Sbjct 15 VPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWG 74
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
RP EVD LMKL A+ ++ +++ + +RFIGDRS+ + L D M AE TA
Sbjct 75 RPQDEVDALMKLFLHALDREVGELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANAR 134
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTG 188
+ L+IA SYGG DI AA+ +A+DV+ G + EQID L V+L LP DL IRTG
Sbjct 135 LVLSIAASYGGRQDIATAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTG 194
Query 189 GDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQIQQDKIE 248
GD R+SNFLLWQ AY EL+FTETLWPEF AL +AGRERRFG TS QI E
Sbjct 195 GDTRISNFLLWQLAYTELWFTETLWPEFDAGVMQQALDDYAGRERRFGLTSAQIADKATE 254
>Q8ZRP2 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=252
Score = 233 bits (594), Expect = 2e-80
Identities = 113/232 (49%), Positives = 155/232 (67%), Gaps = 0/232 (0%)
Query 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
+H +HVAIIMDGN R+AKK + GH+ G S+ V G+ ALT++AFSSEN
Sbjct 14 AHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSEN 73
Query 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
WNRPA EV LM+L A+ ++ + + N+ LR IGD S+ + L + + +E TAH
Sbjct 74 WNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHN 133
Query 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
T +TL IA +YGG WDI +Q+A+ V G++ +QID G+ + +++L PVDL+IR
Sbjct 134 TGLTLNIAANYGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIR 193
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKT 238
TGG++R+SNFLLWQ AYAELYFT+ LWP+F +F+ AL FA RERRFG T
Sbjct 194 TGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGT 245
>Q5PD68 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Salmonella paratyphi A
(strain ATCC 9150 / SARB42)]
Length=252
Score = 233 bits (594), Expect = 2e-80
Identities = 113/232 (49%), Positives = 155/232 (67%), Gaps = 0/232 (0%)
Query 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
+H +HVAIIMDGN R+AKK + GH+ G S+ V G+ ALT++AFSSEN
Sbjct 14 AHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSEN 73
Query 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
WNRPA EV LM+L A+ ++ + + N+ LR IGD S+ + L + + +E TAH
Sbjct 74 WNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHN 133
Query 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
T +TL IA +YGG WDI +Q+A+ V G++ +QID G+ + +++L PVDL+IR
Sbjct 134 TGLTLNIAANYGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIR 193
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKT 238
TGG++R+SNFLLWQ AYAELYFT+ LWP+F +F+ AL FA RERRFG T
Sbjct 194 TGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGT 245
>Q8Z9A5 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Salmonella typhi]
Length=252
Score = 231 bits (590), Expect = 9e-80
Identities = 113/232 (49%), Positives = 155/232 (67%), Gaps = 0/232 (0%)
Query 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
+H +HVAIIMDGN R+AKK + GH+ G S+ V G+ ALT++AFSSEN
Sbjct 14 AHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSEN 73
Query 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
WNRPA EV LM+L A+ ++ + + N+ LR IGD S+ + L + + +E TAH
Sbjct 74 WNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHN 133
Query 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
T +TL IA +YGG WDI +Q+A+ V G++ +QID G+ + +++L PVDL+IR
Sbjct 134 TGLTLNIAANYGGRWDIVQGVRQLAELVQAGVLRPDQIDEERLGQQICMHELAPVDLVIR 193
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKT 238
TGG++R+SNFLLWQ AYAELYFT+ LWP+F +F+ AL FA RERRFG T
Sbjct 194 TGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFGGT 245
>Q8PAV7 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Xanthomonas campestris
pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG
568 / P 25)]
Length=258
Score = 231 bits (590), Expect = 1e-79
Identities = 121/240 (50%), Positives = 157/240 (65%), Gaps = 0/240 (0%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+P+H+AIIMDGN R+A++ + + GHR G +++ ++ C +GV ALT+FAFSSENW
Sbjct 15 VPRHLAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLDKGVSALTLFAFSSENWG 74
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
RP EVD LMKL A+ + +++ + +RFIGDRS+ + L D M AE TA T
Sbjct 75 RPQDEVDALMKLFLHALDRGVEELQRRGVQVRFIGDRSRFTAPLRDRMAGAERITAANTR 134
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTG 188
+ L+IA SYGG DI AA+ +A +V+ G + EQID L V+L LP DL IRTG
Sbjct 135 LVLSIAASYGGRQDIAMAARALAVEVAAGRLQPEQIDEALLASRVALADLPAPDLFIRTG 194
Query 189 GDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQIQQDKIE 248
GD R+SNFLLWQ AY EL+FTETLWPEF AL +AGRERRFG TS QI + E
Sbjct 195 GDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFGLTSAQIAEKATE 254
>P60475 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Shigella flexneri]
Length=253
Score = 231 bits (588), Expect = 2e-79
Identities = 115/238 (48%), Positives = 159/238 (67%), Gaps = 2/238 (1%)
Query 3 LSEE--SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVF 60
LSE+ +H +HVAIIMDGN R+AKK + GH+ G S+ V G++ALT++
Sbjct 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query 61 AFSSENWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAE 120
AFSSENWNRPA EV LM+L A+ ++ + + N+ LR IGD S+ + L + + +E
Sbjct 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query 121 NETAHFTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPP 180
TA T +TL IA +YGG WDI +Q+A+ V G + +QID + ++V +++L P
Sbjct 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query 181 VDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKT 238
VDL+IRTGG++R+SNFLLWQ AYAELYFT+ LWP+F +F+ AL FA RERRFG T
Sbjct 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGT 246
>P60473 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=253
Score = 231 bits (588), Expect = 2e-79
Identities = 115/238 (48%), Positives = 159/238 (67%), Gaps = 2/238 (1%)
Query 3 LSEE--SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVF 60
LSE+ +H +HVAIIMDGN R+AKK + GH+ G S+ V G++ALT++
Sbjct 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query 61 AFSSENWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAE 120
AFSSENWNRPA EV LM+L A+ ++ + + N+ LR IGD S+ + L + + +E
Sbjct 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query 121 NETAHFTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPP 180
TA T +TL IA +YGG WDI +Q+A+ V G + +QID + ++V +++L P
Sbjct 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query 181 VDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKT 238
VDL+IRTGG++R+SNFLLWQ AYAELYFT+ LWP+F +F+ AL FA RERRFG T
Sbjct 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGT 246
>P60474 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Escherichia coli O157:H7]
Length=253
Score = 231 bits (588), Expect = 2e-79
Identities = 115/238 (48%), Positives = 159/238 (67%), Gaps = 2/238 (1%)
Query 3 LSEE--SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVF 60
LSE+ +H +HVAIIMDGN R+AKK + GH+ G S+ V G++ALT++
Sbjct 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query 61 AFSSENWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAE 120
AFSSENWNRPA EV LM+L A+ ++ + + N+ LR IGD S+ + L + + +E
Sbjct 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query 121 NETAHFTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPP 180
TA T +TL IA +YGG WDI +Q+A+ V G + +QID + ++V +++L P
Sbjct 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query 181 VDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKT 238
VDL+IRTGG++R+SNFLLWQ AYAELYFT+ LWP+F +F+ AL FA RERRFG T
Sbjct 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGT 246
>P60472 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Escherichia coli (strain
K12)]
Length=253
Score = 231 bits (588), Expect = 2e-79
Identities = 115/238 (48%), Positives = 159/238 (67%), Gaps = 2/238 (1%)
Query 3 LSEE--SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVF 60
LSE+ +H +HVAIIMDGN R+AKK + GH+ G S+ V G++ALT++
Sbjct 9 LSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLY 68
Query 61 AFSSENWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAE 120
AFSSENWNRPA EV LM+L A+ ++ + + N+ LR IGD S+ + L + + +E
Sbjct 69 AFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128
Query 121 NETAHFTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPP 180
TA T +TL IA +YGG WDI +Q+A+ V G + +QID + ++V +++L P
Sbjct 129 ALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAP 188
Query 181 VDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKT 238
VDL+IRTGG++R+SNFLLWQ AYAELYFT+ LWP+F +F+ AL FA RERRFG T
Sbjct 189 VDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGT 246
>Q88MH6 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Pseudomonas putida (strain
ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=251
Score = 228 bits (582), Expect = 1e-78
Identities = 117/237 (49%), Positives = 156/237 (66%), Gaps = 0/237 (0%)
Query 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
S +P+HVAIIMDGNNR+AKK + GH+ G +++ ++E C GV+ LT+FAFSSEN
Sbjct 10 SSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSEN 69
Query 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
W RPA EV LM+L A+ + R+ + NI+LR IGDRS+ L M AE TA
Sbjct 70 WQRPAEEVGALMELFFSALRREAKRLDENNISLRIIGDRSRFHPELQAAMREAEAVTAGN 129
Query 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
L IA +YGG WDI AA+++A++V G + E I L ++ LP DL IR
Sbjct 130 NRFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLPDLCIR 189
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQIQ 243
TGG++R+SNFLLWQ AYAELYF++ WP+F + +ALA FA R+RRFGKTSEQ++
Sbjct 190 TGGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQVE 246
>Q87ME1 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633)]
Length=251
Score = 227 bits (578), Expect = 6e-78
Identities = 113/235 (48%), Positives = 152/235 (65%), Gaps = 0/235 (0%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
LPKH+AIIMDGN R+AK + GH++G N++ V G++A+T+FAFSSENW
Sbjct 11 LPKHIAIIMDGNGRWAKSKGKPRVFGHKKGVNAVRKTVAAASKLGIKAMTLFAFSSENWR 70
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
RP EV LLM+L + ++ ++ K N+ LR IGD S+ SE L + AEN TA T
Sbjct 71 RPEEEVGLLMELFITVLSSEVKKLHKNNLQLRVIGDTSRFSERLQKKIVEAENLTASNTG 130
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTG 188
M + IA +YGG WDIT+AAK +A +G + +E I+ L ++++ LP VDLLIRT
Sbjct 131 MVINIAANYGGKWDITEAAKALALKARNGEIRVEDINEQLITEHLTMADLPEVDLLIRTS 190
Query 189 GDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQIQ 243
G+ R+SNF+LWQ AYAE+YFT WPEF D A+ F RERRFG T EQ++
Sbjct 191 GECRISNFMLWQMAYAEMYFTPEFWPEFDEDSLVEAVTWFINRERRFGCTGEQVK 245
>Q886N9 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Pseudomonas syringae pv.
tomato (strain ATCC BAA-871 / DC3000)]
Length=251
Score = 225 bits (573), Expect = 3e-77
Identities = 114/237 (48%), Positives = 155/237 (65%), Gaps = 0/237 (0%)
Query 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
S +P+HVAIIMDGNNR+A+K + GH+ G +++ ++E C V+ LT+FAFSSEN
Sbjct 10 SSVPRHVAIIMDGNNRWARKRLLPGVAGHKAGVDAVRAVIEVCAEAKVEVLTLFAFSSEN 69
Query 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
W RPA EV LM+L A+ + R+ + +I+LR IGDRS+ L M AE T+
Sbjct 70 WQRPAEEVGALMELFFTALRRETKRLNENDISLRIIGDRSRFHPELQAAMREAEVRTSGN 129
Query 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
+ L IA +YGG WDI AA+++A++V G + E I L ++ LP DL IR
Sbjct 130 SRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDLPLPDLCIR 189
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQIQ 243
TGG++R+SNFLLWQ AYAELYF++ WP+F D ALA FA R+RRFGKTSEQ++
Sbjct 190 TGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKTSEQVE 246
>Q8GLK9 Isoprenyl transferase [Aquifex pyrophilus]
Length=231
Score = 197 bits (501), Expect = 1e-66
Identities = 102/233 (44%), Positives = 146/233 (63%), Gaps = 6/233 (3%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+P+HVAIIMDGN R+A+K + + GH +G + IVE G++ LT+FAFS+ENWN
Sbjct 5 IPEHVAIIMDGNGRWARKRGLPRIAGHYKGAEVAEDIVEFAIELGIKHLTLFAFSTENWN 64
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
RP EV+ L +LL + + ++ K I +RFIG R ++++ L LM E E+ F +
Sbjct 65 RPKGEVEALFELLRRYLQTKKDKLYKLGIRVRFIGRRDRINKELVKLMQEIEEESKKFKN 124
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTG 188
+ L +A+ YGG DI A K+ K + E+I LF + L+ P DLLIRT
Sbjct 125 LFLNLAVDYGGRDDILRAVKKAVK------LQREEITEELFSSLLDLSCSPDPDLLIRTA 178
Query 189 GDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTSEQ 241
G+ R+SNFLLW AY ELYF+ETLWP+FS +EF AL F+ R+R+FG+ ++
Sbjct 179 GEKRISNFLLWNLAYTELYFSETLWPDFSREEFLKALEDFSRRKRKFGRVLDE 231
>K4D3U9 Cis-prenyltransferase 4, chloroplastic [Solanum lycopersicum]
Length=308
Score = 195 bits (495), Expect = 1e-64
Identities = 100/233 (43%), Positives = 144/233 (62%), Gaps = 2/233 (1%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+PKHVA+IMDGN R+AK + G+ G ++ I+E C G+ LT+FAFSS+NW
Sbjct 75 MPKHVALIMDGNRRWAKMRGLPVALGYEAGIRAVRKIIELCGNWGIMVLTLFAFSSDNWL 134
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
RP EVD+LM L E A++++L + I + IGD SKL + L DL+ A T +
Sbjct 135 RPKVEVDILMSLFERALNDELENFAREGIRISIIGDSSKLPKSLQDLIAKAVKTTKENSR 194
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLN--QLPPVDLLIR 186
+ L +A++Y G D+ A + IA+ V D I++ + I++ L + + N P DLLIR
Sbjct 195 LHLVVAVNYSGQHDVVQACQTIAQKVKDDIIETKDINSFLIEQELQTNCIDFPCPDLLIR 254
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTS 239
T G+ RLSNFLLWQ AY+EL+F+ + WP+F EF AL F R+RR+G+ S
Sbjct 255 TSGELRLSNFLLWQLAYSELFFSHSHWPDFGEAEFLEALCSFQQRQRRYGRQS 307
>A8B1Z2 Di-trans,poly-cis-undecaprenyl-diphosphate synthase [Giardia
intestinalis (strain ATCC 50803 / WB clone C6)]
Length=265
Score = 188 bits (477), Expect = 2e-62
Identities = 102/243 (42%), Positives = 143/243 (59%), Gaps = 21/243 (9%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+P HVA+IMDGN R+A+K ++ GH +G + L+ IV+ C G++ LTV+AFS+ENW+
Sbjct 2 IPMHVAVIMDGNGRWARKQLQERTFGHEQGVSVLESIVDECINCGIRFLTVYAFSTENWS 61
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDR-SKLSEHLTDLMTHAENETAHFT 127
RP EV L +LL AI R+ N+ ++F G+R +++ E + M E +TA T
Sbjct 62 RPPTEVSFLFELLSAAIQRVRTTYRERNVKVQFCGERTTQIPETVIAAMNCIEQDTAACT 121
Query 128 SMTLTIAISYGGMWDITDAAKQIAKDVSDGIV--------------DIEQIDTHLFGRYV 173
+ L++ +YGG +I A + + D +G I+QIDTHL+
Sbjct 122 GLILSVCFNYGGHTEIAQACRSVLADCLEGDAVENIKTRLQMPIEQFIQQIDTHLYA--- 178
Query 174 SLNQLPPVDLLIRTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRER 233
LPPVDLLIRTG + RLSNFL W AYAE+ F++ LWPEFS+ F L FA R R
Sbjct 179 ---NLPPVDLLIRTGCEKRLSNFLPWHLAYAEIIFSDLLWPEFSVRAFKDCLDEFASRTR 235
Query 234 RFG 236
RFG
Sbjct 236 RFG 238
>P55984 Isoprenyl transferase [Helicobacter pylori (strain ATCC
700392 / 26695)]
Length=234
Score = 184 bits (468), Expect = 1e-61
Identities = 92/227 (41%), Positives = 140/227 (62%), Gaps = 1/227 (0%)
Query 11 KHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWNRP 70
KH+AIIMDGN R+AK + GH++G +L I C ++ LT++AFS+ENW RP
Sbjct 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
Query 71 AFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTSMT 130
EVD LMK+L++ + ++ NI R IGD S+ L D + EN+T HF T
Sbjct 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
Query 131 LTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTGGD 190
+A++YG +++ A K + + I +E ++ + R + + LP VDLL+RTGG+
Sbjct 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTGGE 184
Query 191 YRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGK 237
RLSNFLLWQ++YAEL+FT LWP+F+ + ++ ++ F R R+FG+
Sbjct 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
>O82827 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate
specific) [Micrococcus luteus]
Length=249
Score = 184 bits (466), Expect = 4e-61
Identities = 88/230 (38%), Positives = 140/230 (61%), Gaps = 0/230 (0%)
Query 7 SHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSEN 66
+ +PKH+AIIMDGN R+AK+ +M + GH EG ++ I + GV+ LT++AFS+EN
Sbjct 18 AQIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVKKITRYASDLGVKYLTLYAFSTEN 77
Query 67 WNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHF 126
W+RP EV+ LMKL + ++ LP + + N+ + IG L +H + A+ +T H
Sbjct 78 WSRPKDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHN 137
Query 127 TSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIR 186
T +TL A++YGG +I A + IA+ G + +++I F Y+ +P +LLIR
Sbjct 138 TGLTLVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPELLIR 197
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFG 236
T G+ RLSNFL+WQ +Y+E F + WP+F+ + ++++ R RRFG
Sbjct 198 TSGEERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFG 247
>K7W9N9 (2Z,6Z)-farnesyl diphosphate synthase CPT6, chloroplastic
[Solanum lycopersicum]
Length=285
Score = 184 bits (466), Expect = 1e-60
Identities = 100/230 (43%), Positives = 137/230 (60%), Gaps = 6/230 (3%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+PKHVAIIMDGN R+AK + +GH+ +L I G+Q +T FAFS+ENWN
Sbjct 56 IPKHVAIIMDGNRRWAKARGLPVQEGHKFLAPNLKNICNISSKLGIQVITAFAFSTENWN 115
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
R + EVD LM+L EE E + + + IG +SKL L ++ E T
Sbjct 116 RSSEEVDFLMRLFEEFFEE----FMRLGVRVSLIGGKSKLPTKLQQVIELTEEVTKSNEG 171
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLN--QLPPVDLLIR 186
+ L +A++YGG +D+ A K IA V DG++ +E ID LF + ++ + P DLLIR
Sbjct 172 LHLMMALNYGGQYDMLQATKNIASKVKDGLIKLEDIDYTLFEQELTTKCAKFPKPDLLIR 231
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFG 236
TGG+ R+SNFLLWQ AY+ELYFT TL+P+F + A+ F R RRFG
Sbjct 232 TGGEQRISNFLLWQLAYSELYFTNTLFPDFGEEALMDAIFSFQRRHRRFG 281
>K7X479 Dehydrodolichyl diphosphate synthase CPT5, chloroplastic
[Solanum lycopersicum]
Length=313
Score = 184 bits (468), Expect = 1e-60
Identities = 99/233 (42%), Positives = 141/233 (61%), Gaps = 2/233 (1%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+PKH+A+IMDGN R+AK+ + G+ G L V+ G+ ALT+FAFSSENW
Sbjct 80 MPKHIAVIMDGNRRWAKRRGLPVALGYAAGIRVLRNFVKLSYNWGISALTLFAFSSENWF 139
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
RP EVDLLM L ++ + ++L + + I L IGD S+L + L DL+ A T +
Sbjct 140 RPKAEVDLLMGLFDKVLKDELENLARTGIRLSIIGDASQLPKSLQDLIDKAVMATKANSR 199
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGR--YVSLNQLPPVDLLIR 186
+ + +AI+Y G +D+ A + IA+ V DG ++ E I++ L + + P DLLIR
Sbjct 200 LHILVAINYSGQYDVVQACQTIAQRVKDGNIEPEDINSLLVEQELQTKCTEFPSPDLLIR 259
Query 187 TGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFGKTS 239
T G+ RLSNFLLWQ AY EL+F+ + WP+F EF AL F R+RR+G S
Sbjct 260 TSGELRLSNFLLWQLAYTELFFSHSQWPDFGEAEFLEALCSFQQRQRRYGGQS 312
>Q47RM6 Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl
diphosphate specific) [Thermobifida fusca (strain
YX)]
Length=282
Score = 180 bits (457), Expect = 2e-59
Identities = 89/228 (39%), Positives = 137/228 (60%), Gaps = 0/228 (0%)
Query 9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWN 68
+P+HVAI+MDGN R+AK+ + + +GH+ G++SL ++E GV L+ +AFS+ENW
Sbjct 35 IPRHVAIVMDGNGRWAKQRGLPRTEGHKAGESSLFDVIEGALELGVPYLSAYAFSTENWK 94
Query 69 RPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAHFTS 128
R EV LM + I + + + +R+ G +L + + +T AE T H T
Sbjct 95 RSPDEVRFLMGFNRDVIRRRRDELHARGVRVRWAGRPGRLWKSVIKELTEAEELTKHNTK 154
Query 129 MTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLIRTG 188
+TL ++YGG +I DAA +A+DV+ G + ++ RY+ +P VDL IR+
Sbjct 155 LTLQFCVNYGGRAEIADAAAALARDVAAGRLSPNRVTEATLARYLYHPDIPDVDLFIRSS 214
Query 189 GDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFG 236
G+ RLSNFLLWQ++YAE F +TLWP+F F A ++A R+RR+G
Sbjct 215 GEQRLSNFLLWQSSYAEFVFLDTLWPDFDRRHFWQACEIYARRDRRYG 262
>K7WQ45 Nerylneryl diphosphate synthase CPT2, chloroplastic [Solanum
lycopersicum]
Length=314
Score = 177 bits (448), Expect = 1e-57
Identities = 97/231 (42%), Positives = 136/231 (59%), Gaps = 5/231 (2%)
Query 6 ESHLPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSE 65
E +PKH+A+IMDGN R+AK ++ +GH+ L I + G+Q +T FAFS+E
Sbjct 85 EELIPKHIALIMDGNRRWAKAKGLEVYEGHKLIIPKLKEICDISSKLGIQVITAFAFSTE 144
Query 66 NWNRPAFEVDLLMKLLEEAIHEQLPRMRKFNIALRFIGDRSKLSEHLTDLMTHAENETAH 125
NW R EVD LM+L EE +E L +F + + IG +S L L + E T
Sbjct 145 NWKRSKEEVDFLMQLFEEFFNEFL----RFGVRVSVIGCKSNLPMTLQKCIALTEETTKG 200
Query 126 FTSMTLTIAISYGGMWDITDAAKQIAKDVSDGIVDIEQIDTHLFGRYVSLNQLPPVDLLI 185
+ L IA++YGG +DI A K I +G++D+E I+ +LF + + ++ P DLLI
Sbjct 201 NKGLHLVIALNYGGYYDILQATKSIVNKAMNGLLDVEDINKNLFEQELE-SKCPNPDLLI 259
Query 186 RTGGDYRLSNFLLWQAAYAELYFTETLWPEFSIDEFDHALAVFAGRERRFG 236
RTGG+ R+SNFLLWQ AY E YFT TL+P+F + A+ F R RRFG
Sbjct 260 RTGGEQRVSNFLLWQLAYTEFYFTNTLFPDFGEKDLKKAILNFQQRHRRFG 310
Lambda K H a alpha
0.323 0.137 0.410 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1022745
Database: 997dc9614d03a1645d56129d1a23eb4b.SwissProt.fasta
Posted date: May 20, 2024 2:23 AM
Number of letters in database: 6,024
Number of sequences in database: 23
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
