BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a30e0e86aa6db6f5f7f081fedff4a843.SwissProt.fasta
15 sequences; 7,123 total letters
Query= ACIAD1421
Length=436
Score E
Sequences producing significant alignments: (Bits) Value
Q8GP19 Swarming motility regulation sensor protein RssA [Serratia... 149 3e-43
Q8ZLZ9 Sensor protein QseC [Salmonella typhimurium (strain LT2 / ... 140 2e-40
Q8Z3P2 Sensor protein QseC [Salmonella typhi] 140 2e-40
Q8X524 Sensor protein QseC [Escherichia coli O157:H7] 137 2e-39
P40719 Sensor protein QseC [Escherichia coli (strain K12)] 137 3e-39
Q9HV31 Sensor protein kinase PmrB [Pseudomonas aeruginosa (strain... 135 2e-38
P45336 Sensor protein QseC [Haemophilus influenzae (strain ATCC 5... 122 6e-34
P30844 Sensor protein BasS [Escherichia coli (strain K12)] 114 2e-31
P36557 Sensor protein BasS [Salmonella typhimurium (strain LT2 / ... 108 2e-29
Q9Z5G7 Signal transduction histidine-protein kinase/phosphatase M... 106 4e-28
Q1XD95 Uncharacterized sensor-like histidine kinase ycf26 [Neopyr... 100 9e-26
P76339 Sensor histidine kinase HprS [Escherichia coli (strain K12)] 97.1 5e-25
P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacill... 97.1 8e-25
Q7U0X3 Signal transduction histidine-protein kinase/phosphatase M... 96.3 1e-24
P9WGL1 Signal transduction histidine-protein kinase/phosphatase M... 95.5 2e-24
>Q8GP19 Swarming motility regulation sensor protein RssA [Serratia
marcescens]
Length=469
Score = 149 bits (375), Expect = 3e-43
Identities = 95/280 (34%), Positives = 156/280 (56%), Gaps = 10/280 (4%)
Query 139 IPYIFFMPFAIYSMYLLIRHHLRKLTELRTTFSERDYNDLSEIQIENLPIEIRPAIDELN 198
+P + + I ++ LR L ++ T S+R +LS I + EIRP + E+N
Sbjct 167 VPLLGILAAIIVTLLFTAYFSLRPLRQIARTISDRQPGNLSPINVSEQYQEIRPVVMEVN 226
Query 199 YLFKRIEQAKIQQQVFIANAAHELRTPLTALKLQTSLLLKTPQDSQIYDENLSDLSLSLK 258
L RI+ A +++ F+A+AAHELRTP+ A+ Q LL + + Q E + D+ L
Sbjct 227 KLMARIDAANQREKRFMADAAHELRTPIAAVLAQLHLLTQV-TEQQERREIIGDMQQGLD 285
Query 259 RMTHLVDQLMSLAHQEVHQDEPLRL--LNLVAHIRLCVGQLLANARKKDIELQVNIEDDL 316
R L QL++LA E +D PL++ +++ A I C+ Q + A +KD+EL + D
Sbjct 286 RAASLSRQLINLAKLEA-EDFPLKIEAVDIYAEIGKCIAQHVPYALEKDVELSL---DGS 341
Query 317 EEISILATTNSLHSILINLIDNAIKYSPQQGQV-IILLSQDTNAVYVDIHDNGPGISEQE 375
E++ + +L +I NL+DNA+KY+P ++ + S Y+ + DNGPG+SE+
Sbjct 342 EDVVVSTDRRALIAIFTNLLDNALKYAPPGSRIEANIRSLAPLGCYITLRDNGPGVSEEH 401
Query 376 YDHVLERFVRLEHTQQQAIGSGLGLSIVQSALDSVDAKMQ 415
+ ERF R+ TQQ GSGLGL+I ++ D + A+++
Sbjct 402 RSRLFERFYRVPGTQQ--TGSGLGLAIARNLADKIGAQLR 439
>Q8ZLZ9 Sensor protein QseC [Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720)]
Length=449
Score = 140 bits (354), Expect = 2e-40
Identities = 96/293 (33%), Positives = 156/293 (53%), Gaps = 15/293 (5%)
Query 116 QIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTFSERDY 175
+I + Q R +A + L P++ +PF + + LL+ LR L +L R
Sbjct 142 RIVVGQEWDYREDMALAIVAAQLTPWLIALPFMLLILLLLLHRELRPLKKLAQALRFRSP 201
Query 176 NDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALKLQTSL 235
+ + + +P E+RP ++ LN LF RI ++++ F ++AAHELR+PL ALK+QT +
Sbjct 202 ESETPLDAKGVPSEVRPLVEALNQLFSRIHSMMVRERRFTSDAAHELRSPLAALKVQTEV 261
Query 236 LLKTPQDSQIYDENLSDLSLSLKRMTHLVDQLMSLAH-QEVHQDEPLRLLNLVAHIRLCV 294
+ D D+ L+ L + R T LVDQL++L+ ++ + + ++L ++ V
Sbjct 262 AQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLNNLQDVAEISLEELLQSAV 321
Query 295 GQLLANARKK--DIELQVNIEDDLEEISILATTNSLHSILI-NLIDNAIKYSPQQGQVII 351
+ A++ D+ LQ+N D + L L S+L+ NL+DNAI+YSPQ V +
Sbjct 322 MDIYHPAQQANIDVRLQLNAHDVIRTGQPL-----LLSLLVRNLLDNAIRYSPQGSVVDV 376
Query 352 LLSQDTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIVQ 404
L +A + DNGPG++ + H+ ERF R Q GSGLGLSIV+
Sbjct 377 TL----HARSFTVRDNGPGVAPEILTHIGERFYR--PPGQSVTGSGLGLSIVR 423
>Q8Z3P2 Sensor protein QseC [Salmonella typhi]
Length=449
Score = 140 bits (354), Expect = 2e-40
Identities = 96/293 (33%), Positives = 156/293 (53%), Gaps = 15/293 (5%)
Query 116 QIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTFSERDY 175
+I + Q R +A + L P++ +PF + + LL+ LR L +L R
Sbjct 142 RIVVGQEWDYREDMALAIVAAQLTPWLIALPFMLLILLLLLHRELRPLKKLAQALRFRSP 201
Query 176 NDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALKLQTSL 235
+ + + +P E+RP ++ LN LF RI ++++ F ++AAHELR+PL ALK+QT +
Sbjct 202 ESETPLDAKGVPSEVRPLVEALNQLFSRIHSMMVRERRFTSDAAHELRSPLAALKVQTEV 261
Query 236 LLKTPQDSQIYDENLSDLSLSLKRMTHLVDQLMSLAH-QEVHQDEPLRLLNLVAHIRLCV 294
+ D D+ L+ L + R T LVDQL++L+ ++ + + ++L ++ V
Sbjct 262 AQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLNNLQDVAEISLEELLQSAV 321
Query 295 GQLLANARKK--DIELQVNIEDDLEEISILATTNSLHSILI-NLIDNAIKYSPQQGQVII 351
+ A++ D+ LQ+N D + L L S+L+ NL+DNAI+YSPQ V +
Sbjct 322 MDIYHPAQQANIDVRLQLNAHDVIRTGQPL-----LLSLLVRNLLDNAIRYSPQGSVVDV 376
Query 352 LLSQDTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIVQ 404
L +A + DNGPG++ + H+ ERF R Q GSGLGLSIV+
Sbjct 377 TL----HARSFTVRDNGPGVAPEILTHIGERFYR--PPGQSVTGSGLGLSIVR 423
>Q8X524 Sensor protein QseC [Escherichia coli O157:H7]
Length=449
Score = 137 bits (346), Expect = 2e-39
Identities = 92/295 (31%), Positives = 153/295 (52%), Gaps = 9/295 (3%)
Query 111 PANDKQIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTF 170
P +I + Q + R +A + LIP++ +P + M +L+ L L +L
Sbjct 137 PDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPVMLIIMMVLLGRELAPLNKLALAL 196
Query 171 SERDYNDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALK 230
RD + + +P E+RP ++ LN LF R ++++ F ++AAHELR+PLTALK
Sbjct 197 RMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALK 256
Query 231 LQTSLLLKTPQDSQIYDENLSDLSLSLKRMTHLVDQLMSLAH-QEVHQDEPLRLLNLVAH 289
+QT + + D Q + L L + R T LVDQL++L+ + + + + L
Sbjct 257 VQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDL 316
Query 290 IRLCVGQLLANARKKDIELQVNIEDDLEEISILATTNSLHSILINLIDNAIKYSPQQGQV 349
++ V + A++ I++++ + +++ I L ++ NL+DNA++YSPQ V
Sbjct 317 LQSSVMDIYHTAQQAKIDVRLTL--NVQGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVV 374
Query 350 IILLSQDTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIVQ 404
+ L+ D V DNGPG++ + + ERF R Q A GSGLGLSIVQ
Sbjct 375 DVTLNADNFIV----RDNGPGVTPEALARIGERFYR--PPGQTATGSGLGLSIVQ 423
>P40719 Sensor protein QseC [Escherichia coli (strain K12)]
Length=449
Score = 137 bits (345), Expect = 3e-39
Identities = 92/295 (31%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query 111 PANDKQIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTF 170
P +I + Q + R +A + LIP++ +P + M +L+ L L +L
Sbjct 137 PDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALAL 196
Query 171 SERDYNDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALK 230
RD + + +P E+RP ++ LN LF R ++++ F ++AAHELR+PLTALK
Sbjct 197 RMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALK 256
Query 231 LQTSLLLKTPQDSQIYDENLSDLSLSLKRMTHLVDQLMSLAH-QEVHQDEPLRLLNLVAH 289
+QT + + D Q + L L + R T LVDQL++L+ + + + + L
Sbjct 257 VQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDL 316
Query 290 IRLCVGQLLANARKKDIELQVNIEDDLEEISILATTNSLHSILINLIDNAIKYSPQQGQV 349
++ V + A++ I++++ + + I L ++ NL+DNA++YSPQ V
Sbjct 317 LQSSVMDIYHTAQQAKIDVRLTL--NAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVV 374
Query 350 IILLSQDTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIVQ 404
+ L+ D V DNGPG++ + + ERF R Q A GSGLGLSIVQ
Sbjct 375 DVTLNADNFIV----RDNGPGVTPEALARIGERFYR--PPGQTATGSGLGLSIVQ 423
>Q9HV31 Sensor protein kinase PmrB [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=477
Score = 135 bits (341), Expect = 2e-38
Identities = 90/297 (30%), Positives = 156/297 (53%), Gaps = 13/297 (4%)
Query 116 QIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTFSERDY 175
QI IS+ + R+H L F L P + +P ++ + L L E++ +R
Sbjct 145 QIWISENLIYRQHTMNLLLFYSLFPLLLALPLLGGLVWFGVARGLAPLREVQAEVQQRSA 204
Query 176 NDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALKLQTSL 235
L I +E +P+EIR IDELN L +R+ A ++ ++AAHE+RTPL +L+ +
Sbjct 205 RHLQPIAVEAVPLEIRGLIDELNLLLERLRTALEAERRLTSDAAHEIRTPLASLRTHAQV 264
Query 236 LLKTPQDSQIYDENLSDLSLSLKRMTHLVDQLMSLAHQE----VHQDEPLRLLNLVAHIR 291
L++ +D + + L +S S++R++ L++Q++ LA + + Q P+ L L +
Sbjct 265 ALRS-EDPKAHARGLLQVSRSVERISTLMEQILLLARLDGDALLEQFHPVNLATLAEDV- 322
Query 292 LCVGQLLANARKKDIELQVNIEDDLEEISILATTNSLHSILINLIDNAIKYSPQQGQVII 351
+ +L A KDIEL ++ E + ++ L +++ NL+ NA++Y+P GQV I
Sbjct 323 --LSELARQAIDKDIELSLH----QETVYVMGIDLWLKAMVGNLVGNALRYTPAGGQVEI 376
Query 352 LLSQDTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIVQSALD 408
+ + + DNGPG++ +E + RF R T GSGLGL IV+ ++
Sbjct 377 RVENRAQHAVLRVRDNGPGVALEEQQAIFTRFYRSPAT-SSGEGSGLGLPIVKRIVE 432
>P45336 Sensor protein QseC [Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd)]
Length=451
Score = 122 bits (307), Expect = 6e-34
Identities = 106/371 (29%), Positives = 176/371 (47%), Gaps = 18/371 (5%)
Query 38 EMAEFLDKNSLSLRLSTYDPNAHYDETDVFIDIIKHDQL--NPLSQHYNYILPYSSTPYF 95
E + L+KNS S+ +YD D+ F K +L + ++I Y + Y
Sbjct 63 ESSTTLNKNSQSVLKKSYD-----DDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYN 117
Query 96 TKKKTTRGELRIYIYPANDKQ--IQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMY 153
+ RI+ A + + I + Q + R L +E+ + + +P I +
Sbjct 118 ANIYDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMILGQMWIWFASLPILIIVLG 177
Query 154 LLIRHHLRKLTELRTTFSERDYNDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQV 213
LI LR + L R D+S + E LP+EI P + LN F R +++
Sbjct 178 WLIHKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERR 237
Query 214 FIANAAHELRTPLTALKLQTSLLLKTPQDSQIYDENLSDLSLSLKRMTHLVDQLMSLAHQ 273
F ++AAHELR+PL AL++Q + D + ++ L L+ + R + L++QL++L+
Sbjct 238 FTSDAAHELRSPLAALRIQIEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRL 297
Query 274 EVHQD-EPLRLLNLVAHIRLCVGQLLANARKKDIELQVNIEDDLEEISILATTNSLHSIL 332
+ Q E L+LL+ A ++ + + A K+ I L E + ++ + SL +L
Sbjct 298 DNLQALETLQLLDWEAIVQSLISERYFVAEKRKITLVFEKESEPKQKQGQSILVSL--ML 355
Query 333 INLIDNAIKYSPQQGQVIILLSQDTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQ 392
NL+DNAIKY P+ V + +S + I DNG G+ ++ + +RF R Q
Sbjct 356 RNLLDNAIKYCPEDTIVSVKISSS----QIIIEDNGGGVEPEDLKKLGQRFYR--PAGQN 409
Query 393 AIGSGLGLSIV 403
GSGLGLSIV
Sbjct 410 EKGSGLGLSIV 420
>P30844 Sensor protein BasS [Escherichia coli (strain K12)]
Length=363
Score = 114 bits (285), Expect = 2e-31
Identities = 81/285 (28%), Positives = 139/285 (49%), Gaps = 23/285 (8%)
Query 127 RHLAKEL---AFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTFSERDYNDLSEIQI 183
RH+ +E+ ++++P +F + ++ Y +R R L EL+ R ++L+ I I
Sbjct 56 RHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAI 115
Query 184 ENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALKLQTSLLLKTPQDS 243
+ +EI + LN L R+ +++F A+ AHELRTPL ++L LL KT
Sbjct 116 HSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKT---- 171
Query 244 QIYDENLSDLSLSLKRMTHLVDQLMSLAHQEVHQDEPLRLLNLVAHIRLCVGQLLANARK 303
+ +++ L L +M V QL+ LA H++L +L + +
Sbjct 172 --HHIDVAPLVARLDQMMESVSQLLQLARAGQSFSS-----GNYQHVKLLEDVILPSYDE 224
Query 304 KDIELQ-----VNIEDDLEEISILATTNSLHSILINLIDNAIKYSPQQGQVIILLSQDTN 358
L + + + +I++ L +L NL++NA +YSPQ ++I L +D
Sbjct 225 LSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDDG 284
Query 359 AVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIV 403
AV + + D GPGI E + + + FVR++ + G GLGLSIV
Sbjct 285 AV-MAVEDEGPGIDESKCGELSKAFVRMD---SRYGGIGLGLSIV 325
>P36557 Sensor protein BasS [Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720)]
Length=356
Score = 108 bits (270), Expect = 2e-29
Identities = 77/277 (28%), Positives = 138/277 (50%), Gaps = 12/277 (4%)
Query 128 HLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTFSERDYNDLSEIQIENLP 187
H +E ++++P +F + + Y +R R L EL+ R ++L+ I I +
Sbjct 60 HEIREAVASLIVPGVFMVSLTLLICYQAVRRITRPLAELQKELEARTADNLAPIAIHSST 119
Query 188 IEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALKLQTSLLLKTPQDSQIYD 247
+EI + +N L R+ +++F A+ AHELRTPL+ ++L LL KT ++
Sbjct 120 LEIESVVSAINQLVTRLTTTLDNERLFTADVAHELRTPLSGVRLHLELLSKT------HN 173
Query 248 ENLSDLSLSLKRMTHLVDQLMSLAH-QEVHQDEPLRLLNLVAHIRLCVGQLLANARKKDI 306
+++ L L +M V QL+ LA + + + L+ + L L N +
Sbjct 174 VDVAPLIARLDQMMDSVSQLLQLARVGQSFSSGNYQEVKLLEDVILPSYDEL-NTMLETR 232
Query 307 ELQVNIEDDLEEISILATTNSLHSILINLIDNAIKYSPQQGQVIILLSQDTNAVYVDIHD 366
+ + + + ++ + L +L NL++NA +YSP+ + I +S D +A+ + + D
Sbjct 233 QQTLLLPESAADVVVRGDATLLRMLLRNLVENAHRYSPEGTHITIHISADPDAI-MAVED 291
Query 367 NGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIV 403
GPGI E + + E FVR++ + G GLGLSIV
Sbjct 292 EGPGIDESKCGKLSEAFVRMD---SRYGGIGLGLSIV 325
>Q9Z5G7 Signal transduction histidine-protein kinase/phosphatase
MprB [Mycobacterium leprae (strain TN)]
Length=519
Score = 106 bits (265), Expect = 4e-28
Identities = 108/436 (25%), Positives = 197/436 (45%), Gaps = 49/436 (11%)
Query 1 MSWSISIFSI----FLLIFIGVAAYRIALEESQEVIDRQMQEMAEFL-DKNSLSLRLSTY 55
+ W + + ++ +++ + A Y + ID Q+Q A+ L SL+
Sbjct 20 LRWRVMLLAMSMVAMVVVLMAFAVYVVISAALYSDIDNQLQSRAQLLIASGSLAADPGKA 79
Query 56 DPNAHYDETDVFIDIIKHDQLNPLSQHYNYILPYSSTPYFTKKKTT-RGELR-------- 106
Y + + + +NP Y P + P T +K RGEL
Sbjct 80 IEGTAYSDVNAML-------VNPGHSIYTANQPGQTLPVGTAEKAVIRGELFMSQRTASD 132
Query 107 ---IYIYPANDKQIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLR-- 161
+ I+ ND + IS+ ++ + +L + +LI + A + ++ R LR
Sbjct 133 QRILAIHLPNDSSLLISKSLRPTEAVMTKLRWVLLIVGSLGVAVAAVAGGMVTRAGLRPV 192
Query 162 -KLTELRTTFSERDYNDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAH 220
+LTE + D DL I + E+ + N + + + +++ +Q + +A H
Sbjct 193 GRLTEAAERVARTD--DLRPIPVFGSD-ELARLTEAFNLMLRALAESRERQARLVTDAGH 249
Query 221 ELRTPLTALKLQTSLLLKT--PQDSQIYDENLSDLS----LSLKRMTHLVDQLMSLAHQE 274
ELRTPLT+L+ LL+ + P+ ++ D+ ++DL ++ ++ LV L+ L +
Sbjct 250 ELRTPLTSLRTNVELLIASMAPEAPRLPDQEMADLRADVLAQIEELSTLVGDLVDLTRDD 309
Query 275 VHQDEPLRLLNLVAHIRLCVGQLLANARKKDIELQVNIEDDLEEI--SILATTNSLHSIL 332
Q V H + + ++L + ++ + +I D++ I I L +
Sbjct 310 AGQ---------VVHEPIDMSEVLYRSLERVRRRRNDIHFDVQAIGWQIYGDAAGLSRAV 360
Query 333 INLIDNAIKYSPQQGQVIILLSQ-DTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQ 391
+NL+DNA K+SP G+V++ + Q D + V + + D GPGI QE V ERF R T +
Sbjct 361 LNLMDNAAKWSPSGGRVVVTMRQFDPSHVELVVSDYGPGIPPQERRLVFERFYR-STTAR 419
Query 392 QAIGSGLGLSIVQSAL 407
GSGLGL+IV+ +
Sbjct 420 SLPGSGLGLAIVKQVV 435
>Q1XD95 Uncharacterized sensor-like histidine kinase ycf26 [Neopyropia
yezoensis]
Length=653
Score = 100 bits (248), Expect = 9e-26
Identities = 74/241 (31%), Positives = 132/241 (55%), Gaps = 21/241 (9%)
Query 202 KRIEQAKIQQQVFIANAAHELRTPLTALK--LQTSLLLKTPQDSQIYDENLSDLSLSLKR 259
+ +E +++ Q FI+N +HELRTPL ++ L+T D++ E L+ + +R
Sbjct 407 EEVELNEVKNQ-FISNVSHELRTPLFNIRSFLETLYEYHDSLDNRQKLEFLAIANKETER 465
Query 260 MTHLVDQLMSLAHQEVHQDEPLRLLNLVAHIRLCVGQLLANARKKDIELQVNIEDDLEEI 319
+T LV+ ++ L+ E Q+ PL+ ++LV+ I V +A+ K I+L ++IE++L
Sbjct 466 LTRLVNDVLDLSRLESDQEYPLQSMDLVSAIEQTVRTYQLSAKDKKIDLHIDIEENLP-- 523
Query 320 SILATTNSLHSILINLIDNAIKYSPQQGQVIILLSQDTN--------------AVYVDIH 365
IL + + IL NLI N++K++ G +I+L + N V V+I
Sbjct 524 CILGNYSLVLQILANLIGNSLKFTHSDG-IIVLRTYRINDSASKLNSTPLQIQKVRVEIC 582
Query 366 DNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIVQSALDSVDAKMQFKPSQLLGGL 425
D G GIS++ + + RF+R+E+ G+GLGLSIV++ + ++++ S+L G
Sbjct 583 DTGIGISKKNQERIFARFLRIENYVHTLEGTGLGLSIVKNIIQKHNSEIHLY-SELKNGS 641
Query 426 C 426
C
Sbjct 642 C 642
Score = 18.1 bits (35), Expect = 9.5
Identities = 8/28 (29%), Positives = 13/28 (46%), Gaps = 0/28 (0%)
Query 89 YSSTPYFTKKKTTRGELRIYIYPANDKQ 116
+S+TP GE+ I P N ++
Sbjct 151 FSNTPIVNTPNHLEGEIIDIIIPLNKEK 178
Score = 18.1 bits (35), Expect = 9.5
Identities = 20/87 (23%), Positives = 39/87 (45%), Gaps = 8/87 (9%)
Query 46 NSLSLRLSTYDPNAHYDETDVFIDIIKHDQLNPLSQHYNYILPYSSTPYFTKKKTTR--G 103
+++ + TY +A + D+ IDI + L + +Y+ +L + K T G
Sbjct 494 SAIEQTVRTYQLSAKDKKIDLHIDI--EENLPCILGNYSLVLQILANLIGNSLKFTHSDG 551
Query 104 ELRIYIYPANDKQIQIS----QLIKVR 126
+ + Y ND +++ Q+ KVR
Sbjct 552 IIVLRTYRINDSASKLNSTPLQIQKVR 578
>P76339 Sensor histidine kinase HprS [Escherichia coli (strain
K12)]
Length=452
Score = 97.1 bits (240), Expect = 5e-25
Identities = 78/291 (27%), Positives = 144/291 (49%), Gaps = 9/291 (3%)
Query 117 IQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLRKLTELRTTFSERDYN 176
+ +++L R ++ ++ N +I I + LLIR LR++ +L +YN
Sbjct 141 VTVAKLASARHNMLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYN 200
Query 177 DLSE-IQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELRTPLTALKLQTSL 235
D E +++ LP E++P LN + + + + F + AHELRTP+ AL Q +
Sbjct 201 DSREPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQV 260
Query 236 LLKTPQDSQIYDENLSDLSLSLKRMTHLVDQLMSLAHQEVHQD-EPLRLLNLVAHIRLCV 294
L + Y + ++ L+ ++ L + ++ LA + + L L+L + +
Sbjct 261 TLSQTRSIAEYQKTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLL 320
Query 295 GQLLANARKKDIELQVNIEDDLEEISILATTNSLHSILINLIDNAIKYSPQQGQVIILLS 354
L + +K+I +V + IL L +L NLI NAI+YSP++ ++ I
Sbjct 321 DYLEYLSDEKEICFKVECNQQIFADKIL-----LQRMLSNLIVNAIRYSPEKSRIHITSF 375
Query 355 QDTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAIGSGLGLSIVQS 405
DTN+ Y++I PG E + + RF R +++ + ++G GLGLS+V++
Sbjct 376 LDTNS-YLNIDIASPGTKINEPEKLFRRFWRGDNS-RHSVGQGLGLSLVKA 424
>P23545 Alkaline phosphatase synthesis sensor protein PhoR [Bacillus
subtilis (strain 168)]
Length=579
Score = 97.1 bits (240), Expect = 8e-25
Identities = 69/242 (29%), Positives = 128/242 (53%), Gaps = 21/242 (9%)
Query 202 KRIEQAKIQQQVFIANAAHELRTPLTALKLQTSLLLK-TPQDSQIYDENLSDLSLSLKRM 260
K++EQ + + F+AN +HEL+TP+T++K T LL +D + E LS + +R+
Sbjct 345 KKLEQMR---KDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSIILKESERL 401
Query 261 THLVDQLMSLAHQE-------VHQDEPLRLLNLVAHIRLCVGQLLANARKKDIELQVNIE 313
LV L+ L+ E + EP ++L + + L A +K I L +N+
Sbjct 402 QSLVQDLLDLSKIEQQNFTLSIETFEPAKMLGEIETL------LKHKADEKGISLHLNVP 455
Query 314 DDLEEISILATTNSLHSILINLIDNAIKYSPQQGQVIILLSQDTNAVYVDIHDNGPGISE 373
D + +S L + +NL++NA+ Y+P+ G V I + + +++ D+G GI +
Sbjct 456 KDPQYVS--GDPYRLKQVFLNLVNNALTYTPEGGSVAINVKPREKDIQIEVADSGIGIQK 513
Query 374 QEYDHVLERFVRLEHTQ-QQAIGSGLGLSIVQSALDSVDAKMQFKPSQLLGGLCVHLTFK 432
+E + ERF R++ + + + G+GLGL+IV+ +++ + K+ S+L G +T K
Sbjct 514 EEIPRIFERFYRVDKDRSRNSGGTGLGLAIVKHLIEAHEGKIDV-TSELGRGTVFTVTLK 572
Query 433 HS 434
+
Sbjct 573 RA 574
>Q7U0X3 Signal transduction histidine-protein kinase/phosphatase
MprB [Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)]
Length=504
Score = 96.3 bits (238), Expect = 1e-24
Identities = 104/433 (24%), Positives = 194/433 (45%), Gaps = 43/433 (10%)
Query 1 MSWSISIFSI----FLLIFIGVAAYRIALEESQEVIDRQMQEMAEFLDKNSLSLRLSTYD 56
+ W + + ++ +++ + A Y + ID Q+Q A+ L ++ D
Sbjct 20 LRWRVMLLAMSMVAMVVVLMSFAVYAVISAALYSDIDNQLQSRAQLL----IASGSLAAD 75
Query 57 PNAHYDET---DVFIDIIKHDQLNPLSQHYNYILPYSSTP-------YFTKKKTTRGELR 106
P + T DV ++ Q +Q LP + F ++TT +
Sbjct 76 PGKAIEGTAYSDVNAMLVNPGQSIYTAQQPGQTLPVGAAEKAVIRGELFMSRRTTADQRV 135
Query 107 IYIYPANDKQIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLR---KL 163
+ I N + IS+ +K + +L + +LI + A + ++ R LR +L
Sbjct 136 LAIRLTNGSSLLISKSLKPTEAVMNKLRWVLLIVGGIGVAVAAVAGGMVTRAGLRPVGRL 195
Query 164 TELRTTFSERDYNDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELR 223
TE + D DL I + E+ + N + + + +++ +Q + +A HELR
Sbjct 196 TEAAERVARTD--DLRPIPVFGSD-ELARLTEAFNLMLRALAESRERQARLVTDAGHELR 252
Query 224 TPLTALKLQTSLLLKT--PQDSQIYDENLSDLS----LSLKRMTHLVDQLMSLAHQEVHQ 277
TPLT+L+ LL+ + P ++ + + DL ++ ++ LV L+ L+ + +
Sbjct 253 TPLTSLRTNVELLMASMAPGAPRLPKQEMVDLRADVLAQIEELSTLVGDLVDLSRGDAGE 312
Query 278 --DEPLRLLNLVAHIRLCVGQLLANARKKDIELQVNIEDDLEEISILATTNSLHSILINL 335
EP+ + ++ V + L R++ ++ ++E + + T L + +NL
Sbjct 313 VVHEPVDMADV-------VDRSLERVRRRRNDIHFDVE--VIGWQVYGDTAGLSRMALNL 363
Query 336 IDNAIKYSPQQGQVIILLSQ-DTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAI 394
+DNA K+SP G V + LSQ D + + + D GPGI QE V ERF R + +
Sbjct 364 MDNAAKWSPPGGHVGVRLSQLDASHAELVVSDRGPGIPVQERRLVFERFYR-SASARALP 422
Query 395 GSGLGLSIVQSAL 407
GSGLGL+IV+ +
Sbjct 423 GSGLGLAIVKQVV 435
>P9WGL1 Signal transduction histidine-protein kinase/phosphatase
MprB [Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)]
Length=504
Score = 95.5 bits (236), Expect = 2e-24
Identities = 104/433 (24%), Positives = 194/433 (45%), Gaps = 43/433 (10%)
Query 1 MSWSISIFSI----FLLIFIGVAAYRIALEESQEVIDRQMQEMAEFLDKNSLSLRLSTYD 56
+ W + + ++ +++ + A Y + ID Q+Q A+ L ++ D
Sbjct 20 LRWRVMLLAMSMVAMVVVLMSFAVYAVISAALYSDIDNQLQSRAQLL----IASGSLAAD 75
Query 57 PNAHYDET---DVFIDIIKHDQLNPLSQHYNYILPYSSTP-------YFTKKKTTRGELR 106
P + T DV ++ Q +Q LP + F ++TT +
Sbjct 76 PGKAIEGTAYSDVNAMLVNPGQSIYTAQQPGQTLPVGAAEKAVIRGELFMSRRTTADQRV 135
Query 107 IYIYPANDKQIQISQLIKVRRHLAKELAFNMLIPYIFFMPFAIYSMYLLIRHHLR---KL 163
+ I N + IS+ +K + +L + +LI + A + ++ R LR +L
Sbjct 136 LAIRLTNGSSLLISKSLKPTEAVMNKLRWVLLIVGGIGVAVAAVAGGMVTRAGLRPVGRL 195
Query 164 TELRTTFSERDYNDLSEIQIENLPIEIRPAIDELNYLFKRIEQAKIQQQVFIANAAHELR 223
TE + D DL I + E+ + N + + + +++ +Q + +A HELR
Sbjct 196 TEAAERVARTD--DLRPIPVFGSD-ELARLTEAFNLMLRALAESRERQARLVTDAGHELR 252
Query 224 TPLTALKLQTSLLLKT--PQDSQIYDENLSDLS----LSLKRMTHLVDQLMSLAHQEVHQ 277
TPLT+L+ LL+ + P ++ + + DL ++ ++ LV L+ L+ + +
Sbjct 253 TPLTSLRTNVELLMASMAPGAPRLPKQEMVDLRADVLAQIEELSTLVGDLVDLSRGDAGE 312
Query 278 --DEPLRLLNLVAHIRLCVGQLLANARKKDIELQVNIEDDLEEISILATTNSLHSILINL 335
EP+ + ++ V + L R++ ++ ++E + + T L + +NL
Sbjct 313 VVHEPVDMADV-------VDRSLERVRRRRNDILFDVE--VIGWQVYGDTAGLSRMALNL 363
Query 336 IDNAIKYSPQQGQVIILLSQ-DTNAVYVDIHDNGPGISEQEYDHVLERFVRLEHTQQQAI 394
+DNA K+SP G V + LSQ D + + + D GPGI QE V ERF R + +
Sbjct 364 MDNAAKWSPPGGHVGVRLSQLDASHAELVVSDRGPGIPVQERRLVFERFYR-SASARALP 422
Query 395 GSGLGLSIVQSAL 407
GSGLGL+IV+ +
Sbjct 423 GSGLGLAIVKQVV 435
Lambda K H a alpha
0.323 0.138 0.387 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2447830
Database: a30e0e86aa6db6f5f7f081fedff4a843.SwissProt.fasta
Posted date: May 20, 2024 9:56 AM
Number of letters in database: 7,123
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
