BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: b4f039b559e8064cf0920f6ddeecc892.TrEMBL.fasta
25 sequences; 7,451 total letters
Query= ACIAD1425
Length=297
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SCR2 LysR family transcriptional regulator [Acinetobacter sp] 587 0.0
Q9RBI3 SalR [Acinetobacter baylyi (strain ATCC 33305 / BD413 / AD... 587 0.0
N9BU98 HTH lysR-type domain-containing protein [Acinetobacter sol... 582 0.0
A0A1P8EHS4 LysR family transcriptional regulator [Acinetobacter s... 580 0.0
A0A0M1I554 LysR family transcriptional regulator [Acinetobacter s... 578 0.0
A0A3R9BDP7 LysR family transcriptional regulator [Acinetobacter s... 578 0.0
A0A3A8EWE4 LysR family transcriptional regulator [Acinetobacter g... 472 3e-173
A0A2U3N2C7 Nodulation protein D 2 [Acinetobacter stercoris] 353 2e-126
A0A0Q5GJW6 LysR family transcriptional regulator [Acinetobacter s... 352 1e-125
A0A0A8XGU7 Transcriptional regulator [Acinetobacter calcoaceticus] 351 3e-125
D0RZE0 LysR substrate binding domain protein [Acinetobacter calco... 351 3e-125
N8ZP71 HTH lysR-type domain-containing protein [Acinetobacter ger... 350 5e-125
Q9ZI62 LysR family transcriptional regulator [Stutzerimonas stutz... 163 1e-51
Q84IS1 BphR2 [Pseudomonas oleovorans] 159 3e-50
Q8RMN0 LysR-type transcriptional regulator NahR [Pseudomonas fluo... 157 2e-49
Q2XR04 LysR-type transcriptional regulator [Pseudomonas sp. KB35B] 157 3e-49
Q0VH45 DNA-binding transcriptional regulator, LysR family [Pseudo... 155 1e-48
Q8RMM8 LysR-type transcriptional regulator NahR [uncultured bacte... 147 1e-45
Q8RMN1 LysR-type transcriptional regulator NahR [Burkholderia gla... 147 1e-45
Q7B7G7 LysR-type transcriptional regulator NahR [Pseudomonas sp. ... 147 1e-45
Q8RJA6 LysR-type transcriptional regulator NahR [Pseudomonas fluo... 147 1e-45
Q7B7G8 NahR [Pseudomonas putida] 147 1e-45
Q8RMM7 LysR-type transcriptional regulator NahR [uncultured bacte... 147 1e-45
Q7B7G5 LysR-type transcriptional regulator NahR [uncultured bacte... 147 1e-45
Q8RMM9 LysR-type transcriptional regulator NahR [uncultured bacte... 147 2e-45
>A0A7G2SCR2 LysR family transcriptional regulator [Acinetobacter
sp]
Length=296
Score = 587 bits (1514), Expect = 0.0
Identities = 295/296 (99%), Positives = 296/296 (100%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL
Sbjct 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK
Sbjct 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS
Sbjct 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL
Sbjct 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL
Sbjct 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
>Q9RBI3 SalR [Acinetobacter baylyi (strain ATCC 33305 / BD413
/ ADP1)]
Length=296
Score = 587 bits (1514), Expect = 0.0
Identities = 295/296 (99%), Positives = 296/296 (100%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL
Sbjct 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK
Sbjct 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS
Sbjct 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL
Sbjct 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL
Sbjct 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
>N9BU98 HTH lysR-type domain-containing protein [Acinetobacter
soli NIPH 2899]
Length=296
Score = 582 bits (1501), Expect = 0.0
Identities = 292/296 (99%), Positives = 294/296 (99%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL
Sbjct 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK
Sbjct 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIEVEEIKIDQVEKWLIEGFIDVA+FNSTHLEFKHLEYETLFLERYVALVNMNHPRI S
Sbjct 121 IKIEVEEIKIDQVEKWLIEGFIDVAIFNSTHLEFKHLEYETLFLERYVALVNMNHPRIGS 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL
Sbjct 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLAR WLIQTCKKVISVL
Sbjct 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARTWLIQTCKKVISVL 296
>A0A1P8EHS4 LysR family transcriptional regulator [Acinetobacter
soli]
Length=296
Score = 580 bits (1495), Expect = 0.0
Identities = 291/296 (98%), Positives = 293/296 (99%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL
Sbjct 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
SHELYPVFKESILKIEIAVDEALNFNPLTSNK FRIGLSDIGEICLLPTLIEYLRAHAPK
Sbjct 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKIFRIGLSDIGEICLLPTLIEYLRAHAPK 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIEVEEIKIDQVEKWLIEGFIDVA+FNSTHLEFKHLEYETLFLERYVALVNMNHPRI S
Sbjct 121 IKIEVEEIKIDQVEKWLIEGFIDVAIFNSTHLEFKHLEYETLFLERYVALVNMNHPRIGS 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL
Sbjct 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLAR WLIQTCKKVISVL
Sbjct 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARTWLIQTCKKVISVL 296
>A0A0M1I554 LysR family transcriptional regulator [Acinetobacter
sp. C15]
Length=296
Score = 578 bits (1491), Expect = 0.0
Identities = 290/296 (98%), Positives = 293/296 (99%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL
Sbjct 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
SHELYPVFKESILKIEIAVDEALNFNPLTSNK FRIGLSDIGEICLLPTLIEYLRAHAPK
Sbjct 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKIFRIGLSDIGEICLLPTLIEYLRAHAPK 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIEVEEIKIDQVEKWLIEGFIDVA+FNSTHLEFKHLEYETLFLERYVALVNMNHPRI S
Sbjct 121 IKIEVEEIKIDQVEKWLIEGFIDVAIFNSTHLEFKHLEYETLFLERYVALVNMNHPRIGS 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIAL+VPHFGVLQGVLDKTDLMVTL
Sbjct 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALKVPHFGVLQGVLDKTDLMVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLAR WLIQTCKKVISVL
Sbjct 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARTWLIQTCKKVISVL 296
>A0A3R9BDP7 LysR family transcriptional regulator [Acinetobacter
soli]
Length=296
Score = 578 bits (1489), Expect = 0.0
Identities = 290/296 (98%), Positives = 292/296 (99%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL
Sbjct 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
SHELYPVFKESILKIEIAVDEALNFNPLTSNK FRIGLSDIGEICLLPTLIEYLRAHAPK
Sbjct 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKIFRIGLSDIGEICLLPTLIEYLRAHAPK 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIEVEEIKIDQVEKWLIEGFIDVA+FNSTHLEFKHLEYETLFLERYVALVNMNHPRI S
Sbjct 121 IKIEVEEIKIDQVEKWLIEGFIDVAIFNSTHLEFKHLEYETLFLERYVALVNMNHPRIGS 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGV DKTDLMVTL
Sbjct 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVQDKTDLMVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLAR WLIQTCKKVISVL
Sbjct 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARTWLIQTCKKVISVL 296
>A0A3A8EWE4 LysR family transcriptional regulator [Acinetobacter
guerrae]
Length=296
Score = 472 bits (1215), Expect = 3e-173
Identities = 226/296 (76%), Positives = 263/296 (89%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+LIR+FICVYE KNI+KAA+ILNLSQPSV+YNLNRLR+ L+NPLFERTQYGVE TKL
Sbjct 1 MDLALIRVFICVYETKNITKAADILNLSQPSVSYNLNRLRQQLHNPLFERTQYGVEPTKL 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+HELYPVFK +I +EIA+DEALNFNP TS K FR+GLSDIGEICLLP L+EYL+ +AP
Sbjct 61 AHELYPVFKRAICDVEIAIDEALNFNPATSTKVFRLGLSDIGEICLLPVLVEYLQRYAPN 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IK+E+EEIKIDQVEKWL+EGFID AVFNSTHL F LEYETLF ERYVALVN +HPRI
Sbjct 121 IKLEIEEIKIDQVEKWLVEGFIDAAVFNSTHLAFHQLEYETLFQERYVALVNCHHPRIHE 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
+S YL ESHVAIKS+TGHTQVDHVLKL+G+QR IALEVPHFGVLQGVLD+T+L+VTL
Sbjct 181 QISLQDYLAESHVAIKSTTGHTQVDHVLKLLGYQRNIALEVPHFGVLQGVLDRTELVVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
P RAA QYLNQ++V V+ELPF M+ F+VG+HWF+Q+NEP+AR W IQTCKKV+SVL
Sbjct 241 PMRAAAQYLNQANVNVIELPFDMTGFFVGIHWFSQSNEPVARQWFIQTCKKVMSVL 296
>A0A2U3N2C7 Nodulation protein D 2 [Acinetobacter stercoris]
Length=296
Score = 353 bits (907), Expect = 2e-126
Identities = 177/296 (60%), Positives = 221/296 (75%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DLSLIR+F+ +YE KNIS AAE LNLSQPSVTYNLNRLR+ L + LF R + GVE TK+
Sbjct 1 MDLSLIRVFVTIYETKNISHAAERLNLSQPSVTYNLNRLRQQLQDRLFIRGRVGVEPTKI 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ ELYP FK++I IE A+ E +FNP TS+KTFRIG+SDIGEICLLP+LI +L HAP
Sbjct 61 AQELYPTFKQAIYNIESAIAEVQDFNPRTSHKTFRIGMSDIGEICLLPSLIAHLALHAPN 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIEVEEI+ D+VE WLI+GF+D+AVFN H ++E LF ERYV L+ +HPRI+
Sbjct 121 IKIEVEEIQSDKVENWLIDGFLDIAVFNRQHTHMPNIETHQLFEERYVCLLRKDHPRIKE 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
L+ YL+E HVAIKSSTGH QVD LK + R I LEVPHF VLQGVL++TDL+VTL
Sbjct 181 QLTMQQYLSEKHVAIKSSTGHIQVDKTLKELCRSRDIGLEVPHFSVLQGVLEQTDLLVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAA+ YL S V ELPF+ F V +WF ++++ +AR WLIQT +++ L
Sbjct 241 PSRAAKYYLKNSDVNCFELPFKTDLFVVSQNWFKRSDDVVARRWLIQTVQQIFEKL 296
>A0A0Q5GJW6 LysR family transcriptional regulator [Acinetobacter
sp. Leaf130]
Length=296
Score = 352 bits (902), Expect = 1e-125
Identities = 169/296 (57%), Positives = 229/296 (77%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL LI++F+C+YE+++ISKAA+ LNLSQPSVTYNLNRLR+ LN+ LF R++ GVE TK+
Sbjct 1 MDLGLIKVFVCIYESRHISKAADKLNLSQPSVTYNLNRLRRQLNDELFTRSRGGVEPTKV 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+HELYP+F ++I IE A+ +A F+P SNKTFRIGLSD GEICLLP+L+ +L+ AP
Sbjct 61 AHELYPIFHQAIFNIESAIAQAQEFHPENSNKTFRIGLSDAGEICLLPSLMAFLQKAAPH 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I+IE+EEI+ D+VE+WLI+GF+D+AVFNST +E TLF ERYV + +HPR+++
Sbjct 121 IQIEIEEIRSDKVEQWLIDGFLDLAVFNSTQTIMPKIETRTLFEERYVCIARADHPRLKT 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
L+ + YL E HVAIKSSTGH QV+ LK M +R+I LEVPHF VLQGVL +D++VTL
Sbjct 181 KLTLEQYLQEDHVAIKSSTGHIQVEQYLKTMDLKRRIRLEVPHFSVLQGVLQSSDMLVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAA+ YL +V++ ELPF M F V L+WF ++++ +AR WLIQ+ ++ VL
Sbjct 241 PSRAARHYLAHGNVQMFELPFAMDSFKVSLNWFNRSDDIIARKWLIQSVGQIFEVL 296
>A0A0A8XGU7 Transcriptional regulator [Acinetobacter calcoaceticus]
Length=296
Score = 351 bits (900), Expect = 3e-125
Identities = 169/296 (57%), Positives = 228/296 (77%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL LI++F+C+YE+++ISKAA+ LNLSQPSVTYNLNRLR+ LN+ LF R++ GVE TK+
Sbjct 1 MDLGLIKVFVCIYESRHISKAADKLNLSQPSVTYNLNRLRRQLNDELFTRSRGGVEPTKV 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+HELYP+F ++I IE A+ +A F+P SNKTFRIGLSD GEICLLP+L+ +L+ AP
Sbjct 61 AHELYPIFHQAIFNIESAIAQAQEFHPENSNKTFRIGLSDAGEICLLPSLMAFLQKAAPH 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I+IE+EEI+ D+VE+WLI+GF+D+AVFNST +E TLF ERYV + +HPR++
Sbjct 121 IQIEIEEIRSDRVEQWLIDGFLDLAVFNSTQTIMPKIETRTLFEERYVCIARADHPRLQQ 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
L+ + YL E HVAIKSSTGH QV+ LK M +R+I LEVPHF VLQGVL +D++VTL
Sbjct 181 QLTLEQYLQEDHVAIKSSTGHIQVEQYLKTMDLKRRIRLEVPHFSVLQGVLQSSDMLVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAA+ YL +V++ ELPF M F V L+WF ++++ +AR WLIQ+ ++ VL
Sbjct 241 PSRAARHYLAHGNVQMFELPFAMDSFKVSLNWFNRSDDIIARKWLIQSVGQIFEVL 296
>D0RZE0 LysR substrate binding domain protein [Acinetobacter calcoaceticus
RUH2202]
Length=296
Score = 351 bits (900), Expect = 3e-125
Identities = 169/296 (57%), Positives = 228/296 (77%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL LI++F+C+YE+++ISKAA+ LNLSQPSVTYNLNRLR+ LN+ LF R++ GVE TK+
Sbjct 1 MDLGLIKVFVCIYESRHISKAADKLNLSQPSVTYNLNRLRRQLNDELFTRSRGGVEPTKV 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+HELYP+F ++I IE A+ +A F+P SNKTFRIGLSD GEICLLP+L+ +L+ AP
Sbjct 61 AHELYPIFHQAIFNIESAIAQAQEFHPENSNKTFRIGLSDAGEICLLPSLMAFLQKAAPH 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I+IE+EEI+ D+VE+WLI+GF+D+AVFNST +E TLF ERYV + +HPR++
Sbjct 121 IQIEIEEIRSDKVEQWLIDGFLDLAVFNSTQTIMPKIETRTLFEERYVCIARADHPRLQQ 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
L+ + YL E HVAIKSSTGH QV+ LK M +R+I LEVPHF VLQGVL +D++VTL
Sbjct 181 QLTLEQYLQEDHVAIKSSTGHIQVEQYLKTMDLKRRIRLEVPHFSVLQGVLQSSDMLVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAA+ YL +V++ ELPF M F V L+WF ++++ +AR WLIQ+ ++ VL
Sbjct 241 PSRAARHYLAHGNVQMFELPFAMDSFKVSLNWFNRSDDIIARKWLIQSVGQIFEVL 296
>N8ZP71 HTH lysR-type domain-containing protein [Acinetobacter
gerneri DSM 14967 = CIP 107464 = MTCC 9824]
Length=296
Score = 350 bits (898), Expect = 5e-125
Identities = 176/296 (59%), Positives = 218/296 (74%), Gaps = 0/296 (0%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL LIR+F+ +YE K+IS AA+ LNLSQPSVTYNLNRLRK LN+ LF R + GVE TK+
Sbjct 1 MDLGLIRVFVTIYETKHISHAADRLNLSQPSVTYNLNRLRKQLNDQLFIRGRVGVEPTKI 60
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ ELYP FK++I IE A+ E +FNP TS+K FRIGLSDIGEICLLP L+ YL AP
Sbjct 61 ARELYPTFKKAIYNIESAIAEVQDFNPKTSHKNFRIGLSDIGEICLLPHLVSYLAVQAPN 120
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
IKIE+EEI+ D+VE WLI+GF+DVAVFN ++E TLF ERYV L +HPR+
Sbjct 121 IKIEIEEIQSDKVENWLIDGFLDVAVFNRQFTLMPNIETHTLFEERYVCLARKDHPRLAQ 180
Query 181 TLSFDAYLNESHVAIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVTL 240
TLS YL E HVAIKSSTGH QVD LK MG R I LEVPHF VLQGVLD++DL+VTL
Sbjct 181 TLSLTQYLEEKHVAIKSSTGHIQVDKTLKEMGFYRNIVLEVPHFSVLQGVLDQSDLLVTL 240
Query 241 PSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVISVL 296
PSRAAQ YL ++V+ ELPF+ F V +WF ++++ +AR WL++T + + L
Sbjct 241 PSRAAQYYLKIANVKCFELPFKTDSFSVSQNWFKRSDDIVARRWLMKTIQDIFECL 296
>Q9ZI62 LysR family transcriptional regulator [Stutzerimonas stutzeri]
Length=300
Score = 163 bits (412), Expect = 1e-51
Identities = 100/295 (34%), Positives = 158/295 (54%), Gaps = 2/295 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + +K +S A+ L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNQLMVDKRVSIVAQSLGLTQPAVSNALKRLRTALQDELFVRTHQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P LI+ L AP
Sbjct 66 AAHLAEPIAHAMHSLREALHHEERFDPLTSERTFTLAMTDIGEIYFMPRLIDALTRKAPH 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L++G +D+AV +L+ L+ L RYV L NHP R
Sbjct 126 CTISTVRGSSVSLGQSLLDGTVDLAVGLLPNLQAGFLQ-RRLLHNRYVCLCRKNHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + SH+ I +STGH +VD + G +R I LEVPHF + +L T+L+ T
Sbjct 185 PLTLERFCAYSHIRVIAASTGHGEVDSHMARAGIRRDIRLEVPHFVAVGHILQHTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVIS 294
+P R A + + VL +P + E + + W A+ ++ LA IWL Q ++ S
Sbjct 245 VPERFADCCVEPFGLSVLPIPIDLPEIPINMFWHAKYHKDLANIWLRQLMFELFS 299
>Q84IS1 BphR2 [Pseudomonas oleovorans]
Length=300
Score = 159 bits (403), Expect = 3e-50
Identities = 99/295 (34%), Positives = 156/295 (53%), Gaps = 2/295 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + +K +S A+ L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNQLMVDKRVSIVAQSLGLTQPAVSNALKRLRTALQDELFVRTHQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P LI+ L AP
Sbjct 66 AAHLAEPIAHAMHSLREALHHEERFDPLTSERTFTLAMTDIGEIYFMPRLIDALARKAPH 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L +G +D AV +L+ L+ L RYV L NHP R
Sbjct 126 CTISTVRGSSVSLGQSLQDGTVDFAVGLLPNLQAGFLQ-RRLLHNRYVCLCRKNHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + SH+ I +STGH +VD ++ G +R I LEVPHF + +L T+L+ T
Sbjct 185 PLTLERFCAYSHIRVIAASTGHGEVDSLMARAGIRRDIRLEVPHFVAVGHILQHTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVIS 294
+P A + + VL +P + E + + W A+ ++ LA IWL Q ++ S
Sbjct 245 VPEPFADCCVEPFGLNVLPIPIDLPEIPINMFWHAKYHKDLANIWLRQLMFELFS 299
>Q8RMN0 LysR-type transcriptional regulator NahR [Pseudomonas
fluorescens]
Length=300
Score = 157 bits (397), Expect = 2e-49
Identities = 96/295 (33%), Positives = 155/295 (53%), Gaps = 2/295 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + ++ +S AE L L+QP+V+ L RLR L +PLF RT G+E T
Sbjct 6 LDLNLLVVFNQLLVDRRVSVTAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ +F+PLTS +TF + ++DIGEI +P L++ L AP
Sbjct 66 AAHLAEPVTSAMHALRNALQHHKSFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAVQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CVISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLQNHYVCLCRKDHPVTRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD + +G +R I LEVPHF + +L +TDL+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRTDLLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVIS 294
+P R A + + L P + E + + W A+ ++ LA IWL Q ++ S
Sbjct 245 VPIRLADCCVEPFGLSALPHPVVLPEIAINMFWHAKYHKDLANIWLRQLMFELFS 299
>Q2XR04 LysR-type transcriptional regulator [Pseudomonas sp. KB35B]
Length=300
Score = 157 bits (396), Expect = 3e-49
Identities = 95/288 (33%), Positives = 152/288 (53%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + ++ +S AE L L+QP+V+ L RLR L +PLF RT G+E T
Sbjct 6 LDLNLLVVFNQLLVDRRVSVTAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ +F+PLTS +TF + ++DIGEI +P L++ L AP
Sbjct 66 AAHLAEPVTSAMHALRNALQHHKSFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAVQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CVISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLQNHYVCLCRKDHPVTRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD + +G +R I LEVPHF + +L +TDL+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAVGHILQRTDLLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + L P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRLADCCVEPFGLSALPHPVVLPEIAINMFWHAKYHKDLANIWLRQ 292
>Q0VH45 DNA-binding transcriptional regulator, LysR family [Pseudomonas
reinekei]
Length=301
Score = 155 bits (392), Expect = 1e-48
Identities = 95/295 (32%), Positives = 156/295 (53%), Gaps = 2/295 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + ++ +S AAE L L+QP+V+ L RLR L + LF RT +G++ T
Sbjct 6 LDLNLLVVFNQLLLDRRVSTAAENLGLTQPAVSNALKRLRAALGDDLFVRTYHGMQPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ +L +++ + A+ A F+PL+S +TF + ++DIGEI L+P L++ L AP
Sbjct 66 AEQLAEPVLQAMDTLRDALSRANTFDPLSSARTFTVAMTDIGEIYLIPRLMDALARLAPG 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
KI + + L G +DVA+ L + L + YV L +HP R
Sbjct 126 CKISTVRDNAMSLNEDLQNGTVDVAIGLIPQLRAGFFQ-RRLMRQHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + HV + ++TGH + D ++ +G +R I LEVPHF + +L TDL+ T
Sbjct 185 PLTLERFCAYGHVRVVAANTGHGEADTLMMRLGIERSIRLEVPHFAAIGHILKHTDLVAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVIS 294
+P R A L + L P + EF + + W A+ + A WL Q ++ S
Sbjct 245 VPERYATVNLEHFGLTALPHPVDIPEFTINMLWHARYHRDPANRWLRQLMFELFS 299
>Q8RMM8 LysR-type transcriptional regulator NahR [uncultured bacterium]
Length=300
Score = 147 bits (372), Expect = 1e-45
Identities = 95/295 (32%), Positives = 152/295 (52%), Gaps = 2/295 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQTCKKVIS 294
+P R A + + VL P + E + + W A+ ++ LA IWL Q ++ S
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQLMFELFS 299
>Q8RMN1 LysR-type transcriptional regulator NahR [Burkholderia
gladioli]
Length=298
Score = 147 bits (371), Expect = 1e-45
Identities = 94/288 (33%), Positives = 149/288 (52%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + VL P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQ 292
>Q7B7G7 LysR-type transcriptional regulator NahR [Pseudomonas
sp. CG7]
Length=300
Score = 147 bits (371), Expect = 1e-45
Identities = 94/288 (33%), Positives = 149/288 (52%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + VL P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQ 292
>Q8RJA6 LysR-type transcriptional regulator NahR [Pseudomonas
fluorescens]
Length=300
Score = 147 bits (371), Expect = 1e-45
Identities = 94/288 (33%), Positives = 149/288 (52%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + VL P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQ 292
>Q7B7G8 NahR [Pseudomonas putida]
Length=300
Score = 147 bits (371), Expect = 1e-45
Identities = 94/288 (33%), Positives = 149/288 (52%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + VL P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQ 292
>Q8RMM7 LysR-type transcriptional regulator NahR [uncultured bacterium]
Length=300
Score = 147 bits (371), Expect = 1e-45
Identities = 94/288 (33%), Positives = 149/288 (52%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + VL P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQ 292
>Q7B7G5 LysR-type transcriptional regulator NahR [uncultured bacterium]
Length=300
Score = 147 bits (371), Expect = 1e-45
Identities = 94/288 (33%), Positives = 149/288 (52%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDTYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + VL P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQ 292
>Q8RMM9 LysR-type transcriptional regulator NahR [uncultured bacterium]
Length=300
Score = 147 bits (370), Expect = 2e-45
Identities = 94/288 (33%), Positives = 149/288 (52%), Gaps = 2/288 (1%)
Query 1 VDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60
+DL+L+ +F + + +S AE L L+QP+V+ L RLR L + LF RT G+E T
Sbjct 6 LDLNLLVVFNELLVCRRVSIVAENLGLTQPAVSNALKRLRTALQDQLFVRTYQGMEPTPY 65
Query 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120
+ L ++ + A+ F+PLTS +TF + ++DIGEI +P L++ + AP
Sbjct 66 AANLAEPVALAMHALREALQHHERFDPLTSERTFTLAMTDIGEIYFMPRLMDAITLQAPN 125
Query 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEFKHLEYETLFLERYVALVNMNHPRIRS 180
I + + L G +D+AV +L+ + L YV L +HP R
Sbjct 126 CAISTVRDSSMSLMQALQNGTVDLAVGLLPNLQTGFFQ-RRLLHNHYVCLCRKDHPATRE 184
Query 181 TLSFDAYLNESHV-AIKSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGVLDKTDLMVT 239
L+ + + + HV I + TGH +VD L G +R I LEVPHF + +L +T+L+ T
Sbjct 185 PLTLERFCSYGHVRVIAAGTGHGEVDIYLTKAGIRRDIRLEVPHFVAVGHILQRTELLAT 244
Query 240 LPSRAAQQYLNQSHVRVLELPFQMSEFYVGLHWFAQTNEPLARIWLIQ 287
+P R A + + VL P + E + + W A+ ++ LA IWL Q
Sbjct 245 VPIRFADCCVEPFGLSVLPHPVALPEIAINMFWHAKYHQDLANIWLRQ 292
Lambda K H a alpha
0.324 0.139 0.406 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1556499
Database: b4f039b559e8064cf0920f6ddeecc892.TrEMBL.fasta
Posted date: May 31, 2024 10:41 AM
Number of letters in database: 7,451
Number of sequences in database: 25
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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