BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 319a13645a326a2c7c0dd7ab2a8c518e.SwissProt.fasta
           5 sequences; 1,661 total letters



Query= ACIAD1457

Length=337
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O34640 Amicoumacin kinase [Bacillus subtilis (strain 168)]            83.6    6e-22
Q9RXC1 Uncharacterized protein DR_0394 [Deinococcus radiodurans (...  57.0    6e-13
Q9K7G2 Uncharacterized protein BH3399 [Halalkalibacterium halodur...  56.2    9e-13
Q6N1Y2 Homoserine kinase [Rhodopseudomonas palustris (strain ATCC...  40.8    9e-08
B3Q6U2 Homoserine kinase [Rhodopseudomonas palustris (strain TIE-1)]  40.0    2e-07


>O34640 Amicoumacin kinase [Bacillus subtilis (strain 168)]
Length=336

 Score = 83.6 bits (205),  Expect = 6e-22
 Identities = 69/288 (24%), Positives = 125/288 (43%), Gaps = 23/288 (8%)

Query  15   QILAEQAIKQYPNEYQGSVKLLCQSENATFLVTTAQAKYALRIHRPNYHHLQDIESELAW  74
            Q+LAE A +   ++ Q  V+ L  +EN  +        Y L+I          +  E+ W
Sbjct  16   QVLAEAAARYGFSKDQ--VRFLADAENYVYECMKDNQPYILKITHTIRRSSDYMMGEMEW  73

Query  75   LDALNQSGIEVPLAIADQDGQRVITLKLAEGISRYAVLFNWVNGS-MPTTDVDPTAFQQL  133
            L  L   GI V   +   +G+ V  +    G S    ++    G  +  +D + T F +L
Sbjct  74   LRHLAIGGISVAKPLPSLNGKDVEAVPDGNGGSFLLRVYEKAPGQKVDESDWNETLFYEL  133

Query  134  GQITAALHQHSKSWKRPEQ-FNRIVWNHDTMVGAQGHWGNWKHAPHLDQADHAVVEEAIA  192
            G+ T ++H  +KS+K     F R  W+ +  +  +      K+ P     D   V +   
Sbjct  134  GRYTGSMHSLTKSYKLSNPAFKRQEWDEEEQLKLR------KYVPE----DQIKVFQQAD  183

Query  193  RISTELCQYGAGEDRYGLIHADLRLTNLLLQDQQIGVIDFDDCGMSWFMHDLA-------  245
             +  EL +    +D YGL+HADL   N      +I   DFDD G +WF++D++       
Sbjct  184  SLMNELRRLPKSQDNYGLVHADLHHGNFNWDHGKITAFDFDDIGYNWFVNDISILLYNVL  243

Query  246  --AAISFNEHLDAAPQWVEHWLTGYEKTGHVQNHDYVMIPTFIMQRRI  291
                + +++      +++ H++ GY +   +     ++IP F+  R +
Sbjct  244  WYPVVPYDDKAAFTEEFMTHFMKGYWEENELDPAWLMIIPDFLRLRHM  291


 Score = 16.9 bits (32),  Expect = 3.6
 Identities = 6/13 (46%), Positives = 8/13 (62%), Gaps = 0/13 (0%)

Query  317  TVRLCKKYLNGEM  329
            T+R    Y+ GEM
Sbjct  59   TIRRSSDYMMGEM  71


>Q9RXC1 Uncharacterized protein DR_0394 [Deinococcus radiodurans 
(strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / 
LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)]
Length=342

 Score = 57.0 bits (136),  Expect = 6e-13
 Identities = 65/271 (24%), Positives = 111/271 (41%), Gaps = 16/271 (6%)

Query  30   QGSVKLLCQSENATFLVTTAQAKYALRIHRPNYHHLQDIESELAWLDALNQSGIEVPLAI  89
            Q ++ LL +  N T  V + + +  LR++R  +    ++  ELA+L  L   G+ V   +
Sbjct  46   QPALTLLRRGLNDTSRVQSGERRTILRVYRCGWRTPAEVGWELAFLQHLAGRGVRVSSPL  105

Query  90   ADQDGQRVITLKLAEGISRYAVLFNWVNG-SMPTTDVDPTAFQQLGQITAALHQHSKSWK  148
               DG     L  AEG   YA +F ++ G ++  T  D   +   GQ  A LH  +  + 
Sbjct  106  PRADGALFGVLDAAEGPRAYA-MFEYLPGRALENTPADAALY---GQCAAGLHDAADPFT  161

Query  149  RPEQFNRIVWNHDTMVGAQGHWGNWKHAPHLDQADHAVVEEAIARISTELCQYGAGEDRY  208
             P +   +  NH      +         P L     A +E A  R    L     G   +
Sbjct  162  APGRL-ALDLNHLLTEPLRQMRPLLTEFPDL----AAPLEAAAERTQARLTALAPGLS-W  215

Query  209  GLIHADLRLTNL-LLQDQQIGVIDFDDCGMSWFMHDLA----AAISFNEHLDAAPQWVEH  263
            G  H DL   N  L  + ++G+ DFD  G  +  +DLA    + ++  +  +      + 
Sbjct  216  GACHGDLHEANARLTPENEVGLFDFDCAGPGFRAYDLAVYWWSQVTQGQGAEEVQPLWDA  275

Query  264  WLTGYEKTGHVQNHDYVMIPTFIMQRRIQMM  294
            +L  Y +   + + D   +P F+  R +  M
Sbjct  276  FLGAYRERRPLTDADLAALPHFVAARALWFM  306


>Q9K7G2 Uncharacterized protein BH3399 [Halalkalibacterium halodurans 
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 
/ C-125)]
Length=329

 Score = 56.2 bits (134),  Expect = 9e-13
 Identities = 49/234 (21%), Positives = 96/234 (41%), Gaps = 13/234 (6%)

Query  39   SENATFLVTTAQAKYALRIHRPNYHHLQDIESELAWLDALNQSGIEVPLAIADQDGQRVI  98
            S N  F+      KY LR +     +L  I+ EL  +  L    + +   +  ++   V 
Sbjct  43   SANFIFMFQHHGKKYYLRFNDSCERNLTLIKEELKLVQYLGSQALAIAQPVLSKNNNLVE  102

Query  99   TLKLAEGISRYAVLFNWVNGS-MPTTDVDPTAFQQLGQITAALHQHSKSWKRPEQFNRIV  157
             +    G + YAV+F  ++G  +   +++       G++   +H++ K+        R  
Sbjct  103  VVITPIG-TFYAVVFEALDGEHLSFEEMNEEQLFLWGEMLGTIHENLKNVPNDLAIKRPS  161

Query  158  WNHDTMVGAQGHWGNWKHAPHLDQADHAVVEEAIARISTELCQYGAGEDRYGLIHADLRL  217
            W  D            K    +   + A ++E +  IS    Q    ++ +G+IH D  L
Sbjct  162  WKDDLE----------KVKEWIPSNEIAAMKE-LEMISEWADQLPITKENFGIIHYDFEL  210

Query  218  TNLLLQDQQIGVIDFDDCGMSWFMHDLAAAISFNEHLDAAPQWVEHWLTGYEKT  271
             N+   +  IG +DFDDC   W++ D+  A+            ++ ++ GY+ +
Sbjct  211  DNVRFNEITIGALDFDDCAYYWYVADIVYALRDAGKFRVTTPAIKTFIKGYKSS  264


>Q6N1Y2 Homoserine kinase [Rhodopseudomonas palustris (strain 
ATCC BAA-98 / CGA009)]
Length=327

 Score = 40.8 bits (94),  Expect = 9e-08
 Identities = 48/213 (23%), Positives = 87/213 (41%), Gaps = 20/213 (9%)

Query  40   ENATFLVTTAQAKYALRIHRPNYHHLQDIESELAWLDALNQSGIEVPLAIADQDGQRVIT  99
            EN+ FL+ T++  + L ++        D+   L+ +  L  SGI  P  +AD++G+ + T
Sbjct  35   ENSNFLLHTSRGYFILTLYEKRVAR-DDLPFFLSLMTHLADSGINCPQPVADREGRTLAT  93

Query  100  LKLAEGISRYAVLFNWVNGSMPTTDVDPTAFQQLGQITAALHQHSKSW--KRPEQFNRIV  157
            L       R A + ++++G  P           +GQ  A +H   + +  KR    +   
Sbjct  94   L-----AGRPAAIISFLDGVWPRKP-SVVHCAGVGQALAKMHLAGRDFAMKRANALSVAG  147

Query  158  WNHDTMVGAQGHWGNWKHAPHLDQADHAVVEEAIARISTELCQYGAGEDRYGLIHADLRL  217
            W       A+            D+    + +   A +S         +   GLIHADL  
Sbjct  148  W-RPLFAAAEA---------RADEVQPGLRDFLAAELSYLESGVWPSDLPQGLIHADLFP  197

Query  218  TNL-LLQDQQIGVIDFDDCGMSWFMHDLAAAIS  249
             N+  + D+  G+IDF         +D+A  ++
Sbjct  198  DNVFFIGDEVSGIIDFTFACNDLLAYDVAICLN  230


>B3Q6U2 Homoserine kinase [Rhodopseudomonas palustris (strain 
TIE-1)]
Length=327

 Score = 40.0 bits (92),  Expect = 2e-07
 Identities = 48/213 (23%), Positives = 86/213 (40%), Gaps = 20/213 (9%)

Query  40   ENATFLVTTAQAKYALRIHRPNYHHLQDIESELAWLDALNQSGIEVPLAIADQDGQRVIT  99
            EN+ FL+ T++  + L ++        D+   L+ +  L  SGI  P  +AD++G+ + T
Sbjct  35   ENSNFLLHTSRGYFILTLYEKRVAR-DDLPFFLSLMTHLADSGINCPQPVADREGRTLAT  93

Query  100  LKLAEGISRYAVLFNWVNGSMPTTDVDPTAFQQLGQITAALHQHSKSW--KRPEQFNRIV  157
            L       R A + ++++G  P           +GQ  A +H   + +  KR    +   
Sbjct  94   L-----AGRPAAIISFLDGVWPRKP-SVVHCAGVGQALAKMHLAGRDFAMKRANALSVAG  147

Query  158  WNHDTMVGAQGHWGNWKHAPHLDQADHAVVEEAIARISTELCQYGAGEDRYGLIHADLRL  217
            W       A+            D+    + +   A +S         +   GLIHADL  
Sbjct  148  W-RPLFAAAEA---------RADEVQPGLRDFLAAELSYLESGVWPSDLPQGLIHADLFP  197

Query  218  TNL-LLQDQQIGVIDFDDCGMSWFMHDLAAAIS  249
             N+  + D   G+IDF         +D+A  ++
Sbjct  198  DNVFFIGDDVSGIIDFTFACNDLLAYDVAICLN  230



Lambda      K        H        a         alpha
   0.321    0.133    0.420    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 436868


  Database: 319a13645a326a2c7c0dd7ab2a8c518e.SwissProt.fasta
    Posted date:  May 15, 2024  11:02 AM
  Number of letters in database: 1,661
  Number of sequences in database:  5



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40