BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 322f2262e2d77b1a1fa0096620a60c3c.SwissProt.fasta
21 sequences; 6,389 total letters
Query= ACIAD1464
Length=281
Score E
Sequences producing significant alignments: (Bits) Value
Q57855 Uncharacterized ABC transporter ATP-binding protein MJ0412... 180 5e-59
Q65M64 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 175 3e-57
Q81C68 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 174 7e-57
Q1M7R4 Taurine import ATP-binding protein TauB [Rhizobium johnsto... 174 1e-56
Q736E0 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 173 2e-56
Q2YJB5 Putative ATP-binding protein BAB2_1147 [Brucella abortus (... 173 3e-56
Q8FUN3 Putative ATP-binding protein BRA1187/BS1330_II1178 [Brucel... 173 3e-56
A0RFA4 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 172 6e-56
Q63A38 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 171 1e-55
Q576E0 Putative ATP-binding protein BruAb2_1123 [Brucella abortus... 171 2e-55
Q2K164 Taurine import ATP-binding protein TauB [Rhizobium etli (s... 171 2e-55
P97027 Aliphatic sulfonates import ATP-binding protein SsuB [Baci... 159 6e-51
Q55108 Bicarbonate transport ATP-binding protein CmpD [Synechococ... 157 8e-50
Q55107 Bicarbonate transport ATP-binding protein CmpC [Synechococ... 161 1e-48
Q47538 Taurine import ATP-binding protein TauB [Escherichia coli ... 152 2e-48
P38046 Nitrate import ATP-binding protein NrtD [Synechococcus elo... 152 5e-48
Q8NR42 Aliphatic sulfonates import ATP-binding protein SsuB [Cory... 147 2e-46
Q55463 Bicarbonate transport ATP-binding protein CmpD [Synechocys... 148 2e-46
O34992 Glycine betaine/carnitine/choline transport ATP-binding pr... 150 2e-46
P39459 Nitrate transport protein NasD [Klebsiella oxytoca] 147 3e-46
Q55462 Bicarbonate transport ATP-binding protein CmpC [Synechocys... 155 3e-46
>Q57855 Uncharacterized ABC transporter ATP-binding protein MJ0412
[Methanocaldococcus jannaschii (strain ATCC 43067 / DSM
2661 / JAL-1 / JCM 10045 / NBRC 100440)]
Length=267
Score = 180 bits (457), Expect = 5e-59
Identities = 98/246 (40%), Positives = 149/246 (61%), Gaps = 6/246 (2%)
Query 29 LMVRGVEKIYP---NGTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQ 85
L V + KI+ N AL +L++ E ++++GPSGCGK+TLL++ A L+ P+ G+
Sbjct 17 LKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTEGK 76
Query 86 VRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVG 145
V +GK +VFQ+ TLMPW + NV L+L+ + K+ E + + VG
Sbjct 77 VLLDGKEVKGPGADRGVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFIKMVG 136
Query 146 LGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSE 205
L F ++P +LSGGMQ R ++AR L +P+++LMDEPF ALD TR+ L +++ +W +
Sbjct 137 LEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIWQK 196
Query 206 RDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIFMKQCAH 265
TV FVTHS+ EAV+LS RV+V+ ARPGR+ + I+ RD RTS F++
Sbjct 197 EKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIKEIVKIDLERPRD---RTSIEFLEYRKK 253
Query 266 LSEILE 271
+ IL+
Sbjct 254 ILNILK 259
>Q65M64 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505
/ CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL
NRS-1264 / Gibson 46)]
Length=255
Score = 175 bits (444), Expect = 3e-57
Identities = 93/234 (40%), Positives = 143/234 (61%), Gaps = 9/234 (4%)
Query 29 LMVRGVEKIYPNG---THALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQ 85
L +R EK + G T LQ +L ++ GE ++++GPSGCGKSTLLK+ A L+ G+
Sbjct 3 LSIRVNEKAFGKGSFKTSVLQDVNLTVENGEFLTVIGPSGCGKSTLLKIAAGLDGDYEGR 62
Query 86 VRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVG 145
+ NG+ + +FQE L PW ++ N+ L L+ + A +KV E + +V
Sbjct 63 ISMNGREIKGPGIQQGFIFQEHRLFPWMTVEQNIAADLSLK---EPAVRKKVDELIETVR 119
Query 146 LGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSE 205
L +P+ELSGGM R ++ARAL+ EP++LL+DEPFGALD FTR L + +W E
Sbjct 120 LKGAEKQYPRELSGGMSQRVAIARALLREPEILLLDEPFGALDAFTRKHLQDVLTDIWRE 179
Query 206 RDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIF 259
+ +T++ VTH I E+V+L++R+ ++ A+PGR+ I ++ P R RTS +F
Sbjct 180 KKMTMILVTHDIDESVYLANRIAILTAKPGRIHKLIPVDLPFPRS---RTSPVF 230
>Q81C68 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM
2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)]
Length=251
Score = 174 bits (441), Expect = 7e-57
Identities = 84/210 (40%), Positives = 134/210 (64%), Gaps = 6/210 (3%)
Query 31 VRGVEKIYPNGT---HALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVR 87
+ GV K + T L+ + ++ G+ ++++GPSGCGKSTLLK+ A L+ G+V
Sbjct 5 IDGVSKYFLKQTGTVQVLENINFQLEEGDFVTVIGPSGCGKSTLLKIVAGLDNDFEGEVV 64
Query 88 WNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLG 147
+G+ +++ K +FQE L PW +++N+ L L+ +KV E + V L
Sbjct 65 IDGEPILKTSKKQGFIFQEHRLFPWLTVEENIAADLSLKD---KYVKDKVREWVEIVRLD 121
Query 148 KFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERD 207
F S+PKE+SGGM R ++ARAL+ +P++LL+DEPFGALD FTR L + +W ++
Sbjct 122 GFEKSYPKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDAFTRSHLQEVLLNIWEQKK 181
Query 208 LTVVFVTHSIYEAVFLSSRVIVMGARPGRV 237
T++FVTH I EA++LS+R+I+M A+PG++
Sbjct 182 TTMIFVTHDIDEAIYLSNRIIIMSAKPGKI 211
>Q1M7R4 Taurine import ATP-binding protein TauB [Rhizobium johnstonii
(strain DSM 114642 / LMG 32736 / 3841)]
Length=262
Score = 174 bits (441), Expect = 1e-56
Identities = 91/207 (44%), Positives = 122/207 (59%), Gaps = 0/207 (0%)
Query 38 YPNGTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQ 97
Y HAL R DI + LG SGCGKSTLL A S G++ +G+ Q
Sbjct 15 YGRTVHALDRVSFDIPERGFVVALGASGCGKSTLLNAIAGFLPLSDGRITLDGRAVEQPG 74
Query 98 CKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKEL 157
+VFQ+ +L+PW ++ DNV L L V + + E L VGL +F +FP EL
Sbjct 75 ADRGVVFQKDSLLPWKSVIDNVALGLKFAGVKRRERQARALELLRLVGLDEFAGAFPYEL 134
Query 158 SGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSI 217
SGGM+ R +ARAL T PD+LLMDEPFGALD TR ++ + ++W + V F+THSI
Sbjct 135 SGGMRQRVGIARALATNPDILLMDEPFGALDSLTREQMQELLVSIWDKTAKKVFFITHSI 194
Query 218 YEAVFLSSRVIVMGARPGRVVADISIE 244
EA+FL ++V+VM RPGRVVA ++
Sbjct 195 EEALFLGTQVLVMSPRPGRVVARFDLD 221
>Q736E0 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
cereus (strain ATCC 10987 / NRS 248)]
Length=251
Score = 173 bits (438), Expect = 2e-56
Identities = 88/234 (38%), Positives = 142/234 (61%), Gaps = 9/234 (4%)
Query 31 VRGVEKIYPNGTHALQ---RFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVR 87
+ GV K + T +Q + +++G+ ++++GPSGCGKSTLLK+ A L+ G++
Sbjct 5 IDGVSKYFSKQTRTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIIAGLDGEFEGEII 64
Query 88 WNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLG 147
+G+ + K +FQE L PW +++N+ L L+ +KV E + V L
Sbjct 65 IDGERITKPSKKQGFIFQEHRLFPWLTVEENIAADLSLKD---KYVKDKVKEWVEIVRLD 121
Query 148 KFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERD 207
F S+PKE+SGGM R ++ARAL+ +P++LL+DEPFGALD FTR L + +W ++
Sbjct 122 GFEKSYPKEISGGMSQRVAIARALLRDPNVLLLDEPFGALDAFTRSHLQEVLLNIWEQKK 181
Query 208 LTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIFMK 261
T++FVTH I EA++LS+R+++M A+PG++ I P R +TS+ F +
Sbjct 182 TTMIFVTHDIDEAIYLSNRIVIMSAKPGKIHKVIENNLPYPRS---KTSESFQE 232
>Q2YJB5 Putative ATP-binding protein BAB2_1147 [Brucella abortus
(strain 2308)]
Length=260
Score = 173 bits (438), Expect = 3e-56
Identities = 92/219 (42%), Positives = 129/219 (59%), Gaps = 0/219 (0%)
Query 41 GTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKM 100
G AL R +LDI GE ++++GPSGCGKST + + A L QPS G++ K +
Sbjct 16 GFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPER 75
Query 101 AMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKELSGG 160
++FQ+ L PW ++ NV L + +++ E L+ VGL F + PK LSGG
Sbjct 76 GVIFQQYALFPWLTVRQNVEFGLSVAGMSRVKRREISDHYLSLVGLTDFADALPKALSGG 135
Query 161 MQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEA 220
M+ R ++ARA P++LLMDEPFGALD TR + + WS TV+F+TH + EA
Sbjct 136 MKQRCAIARAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRERRTVMFITHDVDEA 195
Query 221 VFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIF 259
V+L++RVIVM ARPGR+ I ++ P R E R S F
Sbjct 196 VYLANRVIVMAARPGRLDQIIPVDLPYPRTEAIRLSPEF 234
>Q8FUN3 Putative ATP-binding protein BRA1187/BS1330_II1178 [Brucella
suis biovar 1 (strain 1330)]
Length=260
Score = 173 bits (438), Expect = 3e-56
Identities = 92/219 (42%), Positives = 129/219 (59%), Gaps = 0/219 (0%)
Query 41 GTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKM 100
G AL R +LDI GE ++++GPSGCGKST + + A L QPS G++ K +
Sbjct 16 GFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPER 75
Query 101 AMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKELSGG 160
++FQ+ L PW ++ NV L + +++ E L+ VGL F + PK LSGG
Sbjct 76 GVIFQQYALFPWLTVRQNVEFGLSVAGMSRVKRREISDHYLSLVGLTDFADALPKALSGG 135
Query 161 MQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEA 220
M+ R ++ARA P++LLMDEPFGALD TR + + WS TV+F+TH + EA
Sbjct 136 MKQRCAIARAYAAAPEILLMDEPFGALDALTRVHMQDQLLDAWSRERRTVMFITHDVDEA 195
Query 221 VFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIF 259
V+L++RVIVM ARPGR+ I ++ P R E R S F
Sbjct 196 VYLANRVIVMAARPGRLDQIIPVDLPYPRTEAIRLSPEF 234
>A0RFA4 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
thuringiensis (strain Al Hakam)]
Length=251
Score = 172 bits (435), Expect = 6e-56
Identities = 87/236 (37%), Positives = 142/236 (60%), Gaps = 9/236 (4%)
Query 29 LMVRGVEKIYPNGT---HALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQ 85
+++ V K + T L+ + +++G+ ++++GPSGCGKSTLLK+ A L+ G+
Sbjct 3 VLINEVSKYFSKQTGTVQVLENINFQLEKGDFVTVIGPSGCGKSTLLKIVAGLDNDFEGE 62
Query 86 VRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVG 145
+ +G+ + K +FQE L PW +++N+ L L+ +KV E + V
Sbjct 63 IIIDGERITKPSKKQGFIFQEHRLFPWLTVEENIAADLSLKD---KYVKDKVKEWVEIVR 119
Query 146 LGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSE 205
L F S+PKE+SGGM R ++ARAL+ +P +LL+DEPFGALD FTR L + +W +
Sbjct 120 LDGFEKSYPKEISGGMSQRVAIARALLRDPSVLLLDEPFGALDAFTRSHLQEVLLNIWEQ 179
Query 206 RDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIFMK 261
+ T++FVTH I EA++LS+R+++M A+PG++ I P R +TS+ F +
Sbjct 180 KKTTMIFVTHDIDEAIYLSNRIVIMSAKPGKIHKVIENNLPYPRS---KTSESFQE 232
>Q63A38 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
cereus (strain ZK / E33L)]
Length=251
Score = 171 bits (433), Expect = 1e-55
Identities = 78/193 (40%), Positives = 127/193 (66%), Gaps = 3/193 (2%)
Query 45 LQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKMAMVF 104
L+ + +++G+ ++++GPSGCGKSTLLK+ A L+ G++ +G+ + K +F
Sbjct 22 LENINFQLEKGDFVTVIGPSGCGKSTLLKIIAGLDNDFEGEIIIDGERITKPSKKQGFIF 81
Query 105 QEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKELSGGMQMR 164
QE L PW +++N+ L L+ +KV E + V L F S+PKE+SGGM R
Sbjct 82 QEHRLFPWLTVEENIAADLSLKD---KYVKDKVKEWVEIVRLDGFEKSYPKEISGGMSQR 138
Query 165 ASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEAVFLS 224
++ARAL+ +P++LL+DEPFGALD FTR L + +W ++ T++FVTH I EA++LS
Sbjct 139 VAIARALLRDPNVLLLDEPFGALDAFTRSHLQEVLLNIWEQKKTTMIFVTHDIDEAIYLS 198
Query 225 SRVIVMGARPGRV 237
+R+++M A+PG++
Sbjct 199 NRIVIMSAKPGKI 211
>Q576E0 Putative ATP-binding protein BruAb2_1123 [Brucella abortus
biovar 1 (strain 9-941)]
Length=260
Score = 171 bits (432), Expect = 2e-55
Identities = 91/219 (42%), Positives = 128/219 (58%), Gaps = 0/219 (0%)
Query 41 GTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKM 100
G AL R +LDI GE ++++GPSGCGKST + + A L QPS G++ K +
Sbjct 16 GFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPER 75
Query 101 AMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKELSGG 160
++FQ+ L PW ++ NV L + +++ E L+ VGL F + PK LSGG
Sbjct 76 GVIFQQYALFPWLTVRQNVEFGLSVAGMSRVKRREISDHYLSLVGLTDFADALPKALSGG 135
Query 161 MQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEA 220
M+ R ++ARA P++LLMDEPF ALD TR + + WS TV+F+TH + EA
Sbjct 136 MKQRCAIARAYAAAPEILLMDEPFAALDALTRVHMQDQLLDAWSRERRTVMFITHDVDEA 195
Query 221 VFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIF 259
V+L++RVIVM ARPGR+ I ++ P R E R S F
Sbjct 196 VYLANRVIVMAARPGRLDQIIPVDLPYPRTEAIRLSPEF 234
>Q2K164 Taurine import ATP-binding protein TauB [Rhizobium etli
(strain CFN 42 / ATCC 51251)]
Length=262
Score = 171 bits (432), Expect = 2e-55
Identities = 89/202 (44%), Positives = 120/202 (59%), Gaps = 0/202 (0%)
Query 43 HALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKMAM 102
HAL R DI + LG SGCGKSTLL A S G++ +G+ + +
Sbjct 20 HALDRVSFDIPERGFVVALGASGCGKSTLLNAIAGFLPLSDGRITLDGRAVERPGADRGV 79
Query 103 VFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKELSGGMQ 162
VFQ+ L+PW ++ DNV L L V + + E L VGL +F +FP ELSGGM+
Sbjct 80 VFQKDALLPWKSVADNVALGLKFAGVNRKERQTRALELLRLVGLDEFANAFPYELSGGMR 139
Query 163 MRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEAVF 222
R +ARAL T PD+LLMDEPFGALD TR ++ + ++W + V F+THSI EA+F
Sbjct 140 QRVGIARALATNPDILLMDEPFGALDSLTREQMQELLVSVWDKTAKKVFFITHSIEEALF 199
Query 223 LSSRVIVMGARPGRVVADISIE 244
L ++V+VM RPGRVVA ++
Sbjct 200 LGTQVLVMSPRPGRVVARFDLD 221
>P97027 Aliphatic sulfonates import ATP-binding protein SsuB [Bacillus
subtilis (strain 168)]
Length=255
Score = 159 bits (402), Expect = 6e-51
Identities = 78/193 (40%), Positives = 120/193 (62%), Gaps = 3/193 (2%)
Query 45 LQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKMAMVF 104
L+ +L I GE ++L+GPSGCGKSTLLK+ A L+ G V NG++ + +F
Sbjct 22 LENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRSVTAPGIQQGFIF 81
Query 105 QEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKELSGGMQMR 164
QE L PW ++ N+ L+L+ +KV E + V L ++P+ELSGGM R
Sbjct 82 QEHRLFPWLTVEQNIAADLNLKD---PKVKQKVDELIEIVRLKGSEKAYPRELSGGMSQR 138
Query 165 ASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEAVFLS 224
++ARAL+ EP++LL+DEPFGALD FTR L + +W ++ T++ VTH I E+V+L
Sbjct 139 VAIARALLREPEVLLLDEPFGALDAFTRKHLQDVLLDIWRKKKTTMILVTHDIDESVYLG 198
Query 225 SRVIVMGARPGRV 237
+ + ++ A+PG++
Sbjct 199 NELAILKAKPGKI 211
>Q55108 Bicarbonate transport ATP-binding protein CmpD [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=278
Score = 157 bits (396), Expect = 8e-50
Identities = 94/260 (36%), Positives = 137/260 (53%), Gaps = 18/260 (7%)
Query 27 PMLMVRGVEKIY--PNGTHA-LQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSA 83
P L+V V KIY P G + L +L +Q GE I ++G SGCGKSTLL M + QPS
Sbjct 19 PFLIVENVSKIYETPKGPYTVLDGVNLTVQEGEFICVIGHSGCGKSTLLNMVSGFNQPSH 78
Query 84 GQVRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRH--VAKSASNEKVAEAL 141
G VR GK + +VFQ L+PW +NV L +D + + + E V E L
Sbjct 79 GSVRLKGKEIDRPGPDRMVVFQNYALLPWMTAYENVYLAVDCVNPQMREGEKREIVREHL 138
Query 142 TSVGLGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRT 201
VGL + ++SGGM+ R ++ARAL P++L++DEPFGALD T+ L ++
Sbjct 139 AMVGLTEAAEKKITQISGGMKQRVAIARALSIRPEVLILDEPFGALDAITKEELQEELLK 198
Query 202 LWSERDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADIS-------------IEGPEY 248
+W++ TV+ +TH I EA+FL+ R+++M P + +I +E P+Y
Sbjct 199 IWNDHRCTVLMITHDIDEALFLADRLVMMTNGPAANIGEIMTIPFPRPRDRERIMEDPQY 258
Query 249 RDEHFRTSDIFMKQCAHLSE 268
D D + AH E
Sbjct 259 YDLRNYALDFLYNRFAHDDE 278
>Q55107 Bicarbonate transport ATP-binding protein CmpC [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=663
Score = 161 bits (408), Expect = 1e-48
Identities = 92/223 (41%), Positives = 127/223 (57%), Gaps = 6/223 (3%)
Query 25 VSPMLMVRGVEKIYP----NGTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQ 80
+S + V +EK +P N AL+ DL+I++GE ISL+G SGCGKSTLL + A LE
Sbjct 1 MSLFVAVENIEKSFPLSGGNEYLALKGIDLEIKQGEFISLIGHSGCGKSTLLNLIAGLEL 60
Query 81 PSAGQVRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLD--LRHVAKSASNEKVA 138
P+ G V G+ +VFQ +L PW +++N+ L +D LR + K V
Sbjct 61 PTDGAVSLEGQQITAPGPDRMVVFQNYSLFPWLTVRENIALAVDEVLRDLPKEERQAIVE 120
Query 139 EALTSVGLGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSD 198
E + VGLG P +LSGGM+ R ++AR L T P LLL+DEPFGALD TR L
Sbjct 121 EHIQLVGLGHAADKPPAQLSGGMKQRVAIARGLATRPKLLLLDEPFGALDALTRGNLQEK 180
Query 199 IRTLWSERDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADI 241
+ + E +T V VTH + EAV LS R++++ PG + I
Sbjct 181 LMQICEENHVTAVMVTHDVDEAVLLSDRIVMLTNGPGSKIGGI 223
>Q47538 Taurine import ATP-binding protein TauB [Escherichia coli
(strain K12)]
Length=255
Score = 152 bits (385), Expect = 2e-48
Identities = 79/198 (40%), Positives = 116/198 (59%), Gaps = 0/198 (0%)
Query 41 GTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKM 100
G AL+ +L ++ GE++ +LGPSGCGK+TLL + A G ++ GK +
Sbjct 13 GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAER 72
Query 101 AMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALTSVGLGKFGASFPKELSGG 160
+VFQ L+PW N+QDNV L L + K E + L VGL + +LSGG
Sbjct 73 GVVFQNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGG 132
Query 161 MQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEA 220
+ R +ARAL P LLL+DEPFGALD FTR ++ + + LW E V+ +TH I EA
Sbjct 133 QRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGKQVLLITHDIEEA 192
Query 221 VFLSSRVIVMGARPGRVV 238
VF+++ ++++ + PGRV+
Sbjct 193 VFMATELVLLSSGPGRVL 210
>P38046 Nitrate import ATP-binding protein NrtD [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=274
Score = 152 bits (384), Expect = 5e-48
Identities = 83/243 (34%), Positives = 133/243 (55%), Gaps = 16/243 (7%)
Query 39 PNGTH-ALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQ 97
P G + A++ +L +Q+GE I ++G SGCGKSTLL + + QP++G V +G+ +
Sbjct 29 PRGPYVAIEDVNLSVQQGEFICVIGHSGCGKSTLLNLVSGFSQPTSGGVYLDGQPIQEPG 88
Query 98 CKMAMVFQEATLMPWANIQDNVRLPLDLR--HVAKSASNEKVAEALTSVGLGKFGASFPK 155
+VFQ +L+PW + +DN+ L + H++ S + V L VGL + P
Sbjct 89 PDRMVVFQNYSLLPWKSARDNIALAVKAARPHLSTSEQRQVVDHHLELVGLTEAQHKRPD 148
Query 156 ELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTH 215
+LSGGM+ R ++ARAL P++L++DEPFGALD T+ L ++ +W E TV+ +TH
Sbjct 149 QLSGGMKQRVAIARALSIRPEVLILDEPFGALDAITKEELQEELLNIWEEARPTVLMITH 208
Query 216 SIYEAVFLSSRVIVMGARPGRVVADI-------------SIEGPEYRDEHFRTSDIFMKQ 262
I EA+FL+ RV++M P + ++ +E P Y D ++
Sbjct 209 DIDEALFLADRVVMMTNGPAATIGEVLEIPFDRPREREAVVEDPRYAQLRTEALDFLYRR 268
Query 263 CAH 265
AH
Sbjct 269 FAH 271
>Q8NR42 Aliphatic sulfonates import ATP-binding protein SsuB [Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 /
BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025)]
Length=243
Score = 147 bits (371), Expect = 2e-46
Identities = 95/249 (38%), Positives = 136/249 (55%), Gaps = 17/249 (7%)
Query 24 SVSPMLMVRGVEKIYPNGT-HALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPS 82
S+ P VRG+ K Y GT LQ DL I GE+ +L+G SG GKST+L++ A L +
Sbjct 6 SLKPAATVRGLRKSY--GTKEVLQGIDLTINCGEVTALIGRSGSGKSTILRVLAGLSKEH 63
Query 83 AGQVRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALT 142
+G V +G A+ FQE L+PW + DNV L+ ++ S + E+ + L
Sbjct 64 SGSVEISGNP--------AVAFQEPRLLPWKTVLDNVTFGLNRTDISWSEAQERASALLA 115
Query 143 SVGLGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTL 202
V L A++P LSGG R SLARAL++EP+LLL+DEPFGALD TR +
Sbjct 116 EVKLPDSDAAWPLTLSGGQAQRVSLARALISEPELLLLDEPFGALDALTRLTAQDLLLKT 175
Query 203 WSERDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADISIEGPEYRDEHFRTSDIFMKQ 262
+ R+L V+ VTH + EA+ L+ V+++ G + ++++ P R RT F
Sbjct 176 VNTRNLGVLLVTHDVSEAIALADHVLLLD--DGAITHSLTVDIPGDR----RTHPSFASY 229
Query 263 CAHLSEILE 271
A L E LE
Sbjct 230 TAQLLEWLE 238
>Q55463 Bicarbonate transport ATP-binding protein CmpD [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=282
Score = 148 bits (374), Expect = 2e-46
Identities = 78/218 (36%), Positives = 122/218 (56%), Gaps = 5/218 (2%)
Query 29 LMVRGVEKIYPNGTH---ALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQ 85
L + V K+YP L+ +L + GE I ++G SGCGKSTLL M + P+ G
Sbjct 24 LTIENVSKVYPTAKGPYTVLENVNLTVNEGEFICVIGHSGCGKSTLLNMVSGFASPTDGS 83
Query 86 VRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVA--EALTS 143
V+ GK + +VFQ L+PW +NV + +D H K+ + ++ + L
Sbjct 84 VQVGGKIITEPGPDRMVVFQNYALLPWLTALENVYIAVDAVHSQKTEAEKRAIAKDHLAM 143
Query 144 VGLGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLW 203
VGL P ++SGGM+ R S+ARAL P++L++DEPFGALD T+ L ++ +W
Sbjct 144 VGLTDSMDKKPGQISGGMKQRVSIARALAIRPEVLILDEPFGALDAITKEELQEELLQIW 203
Query 204 SERDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADI 241
++ TV+ +TH I EA+FL+ R+++M P + +I
Sbjct 204 NDHRCTVLMITHDIDEALFLADRLVMMTNGPHANIGEI 241
>O34992 Glycine betaine/carnitine/choline transport ATP-binding
protein OpuCA [Bacillus subtilis (strain 168)]
Length=380
Score = 150 bits (380), Expect = 2e-46
Identities = 84/211 (40%), Positives = 121/211 (57%), Gaps = 6/211 (3%)
Query 28 MLMVRGVEKIYPNGTHALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVR 87
ML + V K+Y G A+ DLDI +GE I +GPSGCGK+T +KM L +PS+G++
Sbjct 1 MLKLEQVSKVYKGGKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIF 60
Query 88 WNGKTDMQS-----QCKMAMVFQEATLMPWANIQDNVRLPLDLRHVAKSASNEKVAEALT 142
+G+ M+ + K+ V Q+ L P IQ N+ L L + E+ E L
Sbjct 61 IDGENIMEQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEEKRKERARELLK 120
Query 143 SVGLG-KFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRT 201
V +G ++ +P ELSGG Q R + RAL EP L+LMDEPFGALD TR L + +
Sbjct 121 LVDMGPEYLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKK 180
Query 202 LWSERDLTVVFVTHSIYEAVFLSSRVIVMGA 232
L + T+VFVTH + EA+ L+ R++++ A
Sbjct 181 LQRTLNKTIVFVTHDMDEAIKLADRIVILKA 211
>P39459 Nitrate transport protein NasD [Klebsiella oxytoca]
Length=262
Score = 147 bits (371), Expect = 3e-46
Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 6/223 (3%)
Query 25 VSPMLMVRGVEKIYPNGTH---ALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQP 81
+ P++ V+GV + + + ALQ DI GE ISL+G SGCGKSTLL + A + P
Sbjct 1 MKPLIQVQGVSQRFSTASGEFLALQNVSFDIYEGETISLIGHSGCGKSTLLNLIAGIALP 60
Query 82 SAGQVRWNGKTDMQSQCKMAMVFQEATLMPWANIQDNVRLPLDL---RHVAKSASNEKVA 138
+ G + + + + A+VFQ +L+PW DNV L +D R ++K E +
Sbjct 61 TEGGLLCDNREIAGPGPERAVVFQNHSLLPWLTCFDNVALAVDQVFRRSMSKGERKEWIE 120
Query 139 EALTSVGLGKFGASFPKELSGGMQMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSD 198
L V +G P E+SGGM+ R +ARAL +P +LL+DEPFGALD TR L
Sbjct 121 HNLERVQMGHALHKRPGEISGGMKQRVGIARALAMKPKVLLLDEPFGALDALTRAHLQDA 180
Query 199 IRTLWSERDLTVVFVTHSIYEAVFLSSRVIVMGARPGRVVADI 241
+ + + T+V +TH + EAV LS RV++M P V +I
Sbjct 181 VMQIQQSLNTTIVMITHDVDEAVLLSDRVLMMTNGPAATVGEI 223
>Q55462 Bicarbonate transport ATP-binding protein CmpC [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=667
Score = 155 bits (391), Expect = 3e-46
Identities = 88/213 (41%), Positives = 123/213 (58%), Gaps = 5/213 (2%)
Query 44 ALQRFDLDIQRGEIISLLGPSGCGKSTLLKMFADLEQPSAGQVRWNGKTDMQSQCKMAMV 103
AL+ +L+I++GE +SL+G SGCGKSTLL M A L+ PS G V G+ Q ++
Sbjct 24 ALKGINLEIKKGEFVSLIGHSGCGKSTLLNMIAGLDLPSEGIVTLEGQRIKQPGPDKMVI 83
Query 104 FQEATLMPWANIQDNVRLPLDLRHVAKSASNEK--VAEALTSVGLGKFGASFPKELSGGM 161
FQ +L+PW ++ N+ L +D SA+ K V E + VGLG P ELSGGM
Sbjct 84 FQNYSLLPWLTVKQNIALAVDEVMKGASAAERKAIVEEHINLVGLGHAVDKRPGELSGGM 143
Query 162 QMRASLARALVTEPDLLLMDEPFGALDEFTRHRLDSDIRTLWSERDLTVVFVTHSIYEAV 221
+ R ++ARAL P LLL+DEPFGALD TR L + + + +T V VTH + EAV
Sbjct 144 KQRVAIARALAIRPKLLLLDEPFGALDALTRGNLQEQLMRICEQYQVTAVMVTHDVDEAV 203
Query 222 FLSSRVIVMGARPGRVVA---DISIEGPEYRDE 251
LS R++++ PG + ++ I P R E
Sbjct 204 LLSDRIVMLTNGPGSNIGGILEVDIPRPRKRME 236
Lambda K H a alpha
0.321 0.135 0.395 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1264068
Database: 322f2262e2d77b1a1fa0096620a60c3c.SwissProt.fasta
Posted date: May 8, 2024 1:51 PM
Number of letters in database: 6,389
Number of sequences in database: 21
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
