BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 5b34430ef15c4326f9da1a3dfb44ce8c.SwissProt.fasta
14 sequences; 3,813 total letters
Query= ACIAD1465
Length=265
Score E
Sequences producing significant alignments: (Bits) Value
A9WGD1 Riboflavin transport system permease protein RibX [Chlorof... 139 2e-43
Q57306 Probable ABC transporter permease protein HI_0355 [Haemoph... 134 5e-42
Q9K9G6 Formylaminopyrimidine transport permease protein ThiX [Hal... 127 4e-39
P40401 Putative aliphatic sulfonates transport permease protein S... 97.1 2e-27
Q5MZ55 Bicarbonate transport system permease protein CmpB [Synech... 80.9 2e-21
Q55106 Bicarbonate transport system permease protein CmpB [Synech... 80.9 2e-21
P75851 Putative aliphatic sulfonates transport permease protein S... 79.7 4e-21
Q55461 Bicarbonate transport system permease protein CmpB [Synech... 78.6 1e-20
P73451 Nitrate import permease protein NrtB [Synechocystis sp. (s... 75.9 1e-19
P38044 Nitrate import permease protein NrtB [Synechococcus elonga... 74.7 3e-19
Q51881 Nitrate import permease protein NrtB [Phormidium laminosum] 72.8 2e-18
Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monoc... 68.6 2e-17
G2JZ43 Carnitine transport permease protein OpuCB [Listeria monoc... 68.6 2e-17
E0SCY2 Glycine betaine/choline transport system permease protein ... 67.0 3e-16
>A9WGD1 Riboflavin transport system permease protein RibX [Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)]
Length=268
Score = 139 bits (349), Expect = 2e-43
Identities = 86/249 (35%), Positives = 125/249 (50%), Gaps = 10/249 (4%)
Query 18 LALGVTLLLI---WQISLQQMNVPVYLIPKPTDIGHAL--VSQSGLLFGSLWVTLKVTLL 72
L L VTL+L+ WQ + P +++P P + SGLL+ TL L
Sbjct 25 LGLPVTLMLLLVFWQAGVTLSGYPAFILPSPALVAGRFWQALSSGLLWQHTLATLSAALG 84
Query 73 AFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNTTLALVVCA 132
F A++I ++ + R +E P Q P+VA+APL+I+W + V+ A
Sbjct 85 GFTLALIIALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSKVLVA 144
Query 133 MLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFGGLRISSGL 192
L+ PIL NT + +RS+ L+ + I+ A+RWQ+L + P ALP FGG+R L
Sbjct 145 ALITFLPILINTVVAIRSIPRELIEMAYISGANRWQLLRYVEAPLALPVLFGGVRTGLAL 204
Query 193 ALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTGLVLFILMSMLSQ 252
A GAVV EFVAG GL I A D PL+F AL + L L++L +L +
Sbjct 205 ATTGAVVGEFVAG----RVGLGALINIARGLFDTPLIFVALATLALITLTLYVLAGLLER 260
Query 253 MFLNKWHES 261
+ L +W S
Sbjct 261 L-LVRWEAS 268
>Q57306 Probable ABC transporter permease protein HI_0355 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 /
Rd)]
Length=245
Score = 134 bits (338), Expect = 5e-42
Identities = 80/243 (33%), Positives = 129/243 (53%), Gaps = 4/243 (2%)
Query 13 RVAAPLALGVTLLLIWQISLQQMNVPVYLIPKPTDIGHALVSQSGLLFGSLWVTLKVTLL 72
R+ PL + LL+IWQ+ + P Y+ P P + L + + LL+ VTL L
Sbjct 4 RLLKPLLIVGVLLMIWQMVATLGSFPHYIFPSPQAVRQQLFTHAELLWQHTQVTLLEICL 63
Query 73 AFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNTTLALVVCA 132
+ + G + A L SR I A +P ++ Q P+ AIAPL+++W + +V +
Sbjct 64 GLLLGFLFGLISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMS 123
Query 133 MLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFGGLRISSGL 192
+L+ FP+ GLR+ L+L + S ++L+++R+P ALP F GLRI+ +
Sbjct 124 VLIIYFPVTAACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSV 183
Query 193 ALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTGLVLFILMSMLSQ 252
A IGAVV E+V G+S GL Y ++ A ++ + LMFAAL ++ L L+ + L
Sbjct 184 APIGAVVGEWV----GSSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLH 239
Query 253 MFL 255
F+
Sbjct 240 RFI 242
>Q9K9G6 Formylaminopyrimidine transport permease protein ThiX
[Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125)]
Length=250
Score = 127 bits (319), Expect = 4e-39
Identities = 78/247 (32%), Positives = 128/247 (52%), Gaps = 7/247 (3%)
Query 17 PLALGVTLLLIWQISLQQMNVPVYLIPKPTDIGHALVSQS-GLLFGSLWVTLKVTLLAFI 75
P + L++IW+IS + + P YL+P P I + S L F L TL + +
Sbjct 10 PTLFFLMLMVIWEISARMIGQP-YLLPSPIQIVMRTIDLSESLFFTHLPATLAIISIGLA 68
Query 76 CAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNTTLALVVCAMLV 135
++V+G L++ L + +E P + Q P++A+AP+ ++W + + V +L+
Sbjct 69 LSIVLGILLSLLMFWNERVERAVYPLLVASQTIPVIALAPIFVLWFGYSIWSKVAVTVLL 128
Query 136 AIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFGGLRISSGLALI 195
FPI NT GL+S N LF A++ Q+ RL VP+ LP F GLRI+ LA+I
Sbjct 129 TFFPITVNTYDGLKSTNRQYEELFYTMGATKRQLFYRLFVPSTLPSFLTGLRIAVPLAVI 188
Query 196 GAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTGLVLFILMSMLSQMFL 255
GA V E++ G + GL Y + Q D P +FA +F+++ G++ F + L + L
Sbjct 189 GAAVGEWL----GANEGLGYFSRRMMTQFDGPGVFAPIFILSLLGILGFAAIKKLENILL 244
Query 256 NKWHESE 262
W + +
Sbjct 245 -PWRKKQ 250
>P40401 Putative aliphatic sulfonates transport permease protein
SsuC [Bacillus subtilis (strain 168)]
Length=276
Score = 97.1 bits (240), Expect = 2e-27
Identities = 68/246 (28%), Positives = 118/246 (48%), Gaps = 7/246 (3%)
Query 18 LALGVTLLLIWQISLQQMNVPVYLIPKPTDIGHAL--VSQSGLLFGSLWVTLKVTLLAFI 75
L L ++ IWQ+ V ++P P I + SG LFG L +++ L F+
Sbjct 33 LLLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFL 92
Query 76 CAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNTTLALVVCAMLV 135
+G +I L S+ E P + + P +A+ PL I+W ++ ++ L
Sbjct 93 LGAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALG 152
Query 136 AIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFGGLRISSGLALI 195
A FP+ NT G+R V+A L + ++ + Q + ++ +P ALP G+R+S G+A +
Sbjct 153 AFFPVYINTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLGIAWL 212
Query 196 GAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTGLVLFILMSMLSQMFL 255
G VV+E + G+S+G+ Y I+ A +FA + + G + + +L + L
Sbjct 213 GLVVAELM----GSSSGVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLL 268
Query 256 NKWHES 261
KW S
Sbjct 269 -KWRNS 273
>Q5MZ55 Bicarbonate transport system permease protein CmpB [Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)]
Length=278
Score = 80.9 bits (198), Expect = 2e-21
Identities = 67/256 (26%), Positives = 120/256 (47%), Gaps = 13/256 (5%)
Query 10 KFRRVAAPLALGVTLLLIWQI----SLQQMNVPVYLIPKPTD---IGHALVSQSGLLFGS 62
K + PLA + L+IWQI ++ P+ L + + + + + GL G
Sbjct 23 KLDGILLPLAGILGFLIIWQIFSSSGATRLPGPLSLFTEERTRELLLYPFLDRGGLDKGL 82
Query 63 LWVTL-KVTLLA--FICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVII 119
W T+ +T +A F A +IG + L +R + A P ++ +A P+ ++
Sbjct 83 FWQTIASLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALV 142
Query 120 WIQNTTLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNAL 179
Q A + + A++PIL NT G+R + N+ ++ + S+ + LM++ +P AL
Sbjct 143 AFQQNQPAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAAL 202
Query 180 PYFFGGLRISSGLALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCT 239
PY F GLRI+ GL+ + + +E V G+ + I A Q + + A+ I
Sbjct 203 PYIFTGLRIAIGLSWLAIIAAEIVM---SGIVGIGFFIWDAYQQNYVSDIILAVIYIGAV 259
Query 240 GLVLFILMSMLSQMFL 255
GL+L ++ L + L
Sbjct 260 GLLLDRFVAWLQRWIL 275
>Q55106 Bicarbonate transport system permease protein CmpB [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=278
Score = 80.9 bits (198), Expect = 2e-21
Identities = 67/256 (26%), Positives = 120/256 (47%), Gaps = 13/256 (5%)
Query 10 KFRRVAAPLALGVTLLLIWQI----SLQQMNVPVYLIPKPTD---IGHALVSQSGLLFGS 62
K + PLA + L+IWQI ++ P+ L + + + + + GL G
Sbjct 23 KLDGILLPLAGILGFLIIWQIFSSSGATRLPGPLSLFTEERTRELLLYPFLDRGGLDKGL 82
Query 63 LWVTL-KVTLLA--FICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVII 119
W T+ +T +A F A +IG + L +R + A P ++ +A P+ ++
Sbjct 83 FWQTIASLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALV 142
Query 120 WIQNTTLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNAL 179
Q A + + A++PIL NT G+R + N+ ++ + S+ + LM++ +P AL
Sbjct 143 AFQQNQPAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAAL 202
Query 180 PYFFGGLRISSGLALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCT 239
PY F GLRI+ GL+ + + +E V G+ + I A Q + + A+ I
Sbjct 203 PYIFTGLRIAIGLSWLAIIAAEIVM---SGIVGIGFFIWDAYQQNYVSDIILAVIYIGAV 259
Query 240 GLVLFILMSMLSQMFL 255
GL+L ++ L + L
Sbjct 260 GLLLDRFVAWLQRWIL 275
>P75851 Putative aliphatic sulfonates transport permease protein
SsuC [Escherichia coli (strain K12)]
Length=263
Score = 79.7 bits (195), Expect = 4e-21
Identities = 59/246 (24%), Positives = 117/246 (48%), Gaps = 7/246 (3%)
Query 16 APLALGVTLLLIWQISLQQMNVPVYLIPKPTDIGHAL--VSQSGLLFGSLWVTLKVTLLA 73
AP L V ++ +WQ++ + ++P P + A +S SG L+ L ++ L+
Sbjct 13 APWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIG 72
Query 74 FICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNTTLALVVCAM 133
F +G ++ + SR E + + P +A+ PLVI+W A +
Sbjct 73 FSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVA 132
Query 134 LVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFGGLRISSGLA 193
L +FPI NT G+R+++ GL+ + + S + + + +P ALP G+R + GL
Sbjct 133 LGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLM 192
Query 194 LIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTGLVLFILMSMLSQM 253
+ +V+E ++ ++G+ Y + A L ++ A+ L G + + +L ++
Sbjct 193 WLTLIVAETIS----ANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERL 248
Query 254 FLNKWH 259
+L +W+
Sbjct 249 WL-RWN 253
>Q55461 Bicarbonate transport system permease protein CmpB [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=280
Score = 78.6 bits (192), Expect = 1e-20
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 15/252 (6%)
Query 4 PLMNHPKFRR--VAAPLALGVTLLLIWQI----SLQQMNVPVYLIPKP---TDIGHALVS 54
PL + RR + P+ + LL+WQ+ L ++ P L P T + +
Sbjct 17 PLQKFWRKRRGDILPPIFGILGFLLLWQLISSAGLIKLPPPSSLWTDPRTRTLLMYPFYD 76
Query 55 QSGLLFGSLWVTLKV---TLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIV 111
Q GL G W TL + A ++G L +++ P ++ +
Sbjct 77 QGGLDKGLFWQTLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFLRMVAPL 136
Query 112 AIAPLVIIWIQNTTLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLM 171
A P+ ++ +Q A + + +++PIL NTT G++ + +N+ ++ + S +
Sbjct 137 AWVPIALVALQQNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQKFFF 196
Query 172 RLRVPNALPYFFGGLRISSGLALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFA 231
++ +P+ALPY F GLRI+ GLA + + +E V G+ + I A Q + +
Sbjct 197 KILIPSALPYIFTGLRIAIGLAWLAIIAAEIVM---SGIVGIGFFIWDAYQQNYISEIIL 253
Query 232 ALFLITCTGLVL 243
A+F I GL+L
Sbjct 254 AVFYIGAVGLLL 265
>P73451 Nitrate import permease protein NrtB [Synechocystis sp.
(strain PCC 6803 / Kazusa)]
Length=275
Score = 75.9 bits (185), Expect = 1e-19
Identities = 63/253 (25%), Positives = 112/253 (44%), Gaps = 15/253 (6%)
Query 9 PKFRRVAAPLALGVTLLLIWQISLQ----QMNVPVYLIPKPTD-IGHALVSQSGLLFG-- 61
PK R A +A+ LL++WQI + PV ++ + I + G G
Sbjct 23 PKVIRPAVAIAV---LLVVWQILCSGEGSNLPSPVQVLEQTYPLILNPFFDNGGTDKGLG 79
Query 62 -SLWVTLKVTLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIW 120
++ +L + F A V+G + L S+ + P + + P +A P+ +
Sbjct 80 IQIFASLTRVAVGFSAAAVVGIALGILIGSSKFMYDALDPIFQVLRTIPPLAWLPIALAA 139
Query 121 IQNTTLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALP 180
+Q + + + AI+PI+ NTT+G + V N+ ++ K S+ Q + P A+P
Sbjct 140 LQEAEPSAIFVIFITAIWPIVINTTVGAQQVPQDYRNVSRVLKLSKSQYFFNILFPAAVP 199
Query 181 YFFGGLRISSGLALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTG 240
Y F GLRI GL+ + V +E + G G+ + I A + + AL + G
Sbjct 200 YIFTGLRIGIGLSWLAIVAAEMLIG----GVGIGFFIWDAYNSSLISEIIIALIYVGIVG 255
Query 241 LVLFILMSMLSQM 253
L+L ++ L +
Sbjct 256 LLLDRFIAFLESL 268
>P38044 Nitrate import permease protein NrtB [Synechococcus elongatus
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=279
Score = 74.7 bits (182), Expect = 3e-19
Identities = 43/189 (23%), Positives = 91/189 (48%), Gaps = 1/189 (1%)
Query 65 VTLKVTLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNT 124
++L+ + ++ A G L+ + S+ + P + + P +A P+ ++ Q+
Sbjct 86 ISLQRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISLMVFQDA 145
Query 125 TLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFG 184
+ + + AI+PI+ NT +G+ + N+ ++ K S+ ++ + +P+ +PY F
Sbjct 146 NTSAIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTVPYVFA 205
Query 185 GLRISSGLALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPLMFAALFLITCTGLVLF 244
GLRI+ GLA + V +E + GG + AG + A+F + GL L
Sbjct 206 GLRIAVGLAWLAIVAAEMLKADGGIGY-FIWDAYNAGGDGSSSQIILAIFYVGLVGLSLD 264
Query 245 ILMSMLSQM 253
L++ + ++
Sbjct 265 RLVAWVGRL 273
Score = 26.6 bits (57), Expect = 0.005
Identities = 26/91 (29%), Positives = 40/91 (44%), Gaps = 12/91 (13%)
Query 167 WQVLMRLRVPNALPYFFGGLRISSGLALIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDL 226
WQV+ + + LP G + + + + V F GGTS GL QIL + L
Sbjct 39 WQVISAILGQDRLP---GPINVVANTWMPYIVEPFF--DNGGTSKGLGLQIL-----ISL 88
Query 227 PLMFAALFLITCTGLVLFILMSMLSQMFLNK 257
+ L CTG+++ ++ M FL K
Sbjct 89 QRVAIGYLLAACTGILVGGVLGM--SKFLGK 117
>Q51881 Nitrate import permease protein NrtB [Phormidium laminosum]
Length=279
Score = 72.8 bits (177), Expect = 2e-18
Identities = 59/248 (24%), Positives = 117/248 (47%), Gaps = 14/248 (6%)
Query 13 RVAAPLALGVTLLL-IWQISLQQMNV---PVYLIPKPTD-IGHALVSQSGLLFGSLW--- 64
R + P A+ +LL IWQ+ N P+ ++ + D I SG G W
Sbjct 28 RRSIPTAIAFFVLLGIWQLLCSGENAACRPIQVVQESWDLIIDPFYRGSGTDQGLFWQIA 87
Query 65 VTLKVTLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTPIVAIAPLVIIWIQNT 124
+L+ + ++ A + G + L S ++ P + + P +A P+ + +++
Sbjct 88 ASLQRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLPISLAAFRDS 147
Query 125 TLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFG 184
A + + AI+PI+ NT +G++++ N+ ++ K SR +++ +P +PY F
Sbjct 148 QPAAIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDYFLKVLLPATVPYIFT 207
Query 185 GLRISSGLALIGAVVSEFVAGTGGTSAG-LAYQILQAGFQLDLPLMFAALFLITCTGLVL 243
GL+I+ GL+ + V +E + TGG G + +G ++ L A+ + GL+L
Sbjct 208 GLKIAIGLSWLAIVAAEML--TGGVGIGFFIWDAYNSGSNSEVIL---AIIYVGLVGLLL 262
Query 244 FILMSMLS 251
L+ ++
Sbjct 263 NALVGFIA 270
>Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monocytogenes]
Length=218
Score = 68.6 bits (166), Expect = 2e-17
Identities = 39/160 (24%), Positives = 78/160 (49%), Gaps = 8/160 (5%)
Query 49 GHALVSQSGLLFGSLWVTLKVTLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVT 108
GH L+ Q+ W L ++L A I + + L +S + + + Q
Sbjct 12 GHNLLVQT-------WQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTV 64
Query 109 PIVAIAPLVIIWIQNTTLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQ 168
P +AI +I ++ TL ++ + A+ PIL NT +G+R V+ L+ + + WQ
Sbjct 65 PSLAILAFIIPFLGVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124
Query 169 VLMRLRVPNALPYFFGGLRISSGLALIGAVVSEFVAGTGG 208
+++ + +PN++ G+R+S+ + A ++ ++ G GG
Sbjct 125 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYI-GAGG 163
>G2JZ43 Carnitine transport permease protein OpuCB [Listeria monocytogenes
serotype 1/2a (strain 10403S)]
Length=218
Score = 68.6 bits (166), Expect = 2e-17
Identities = 39/160 (24%), Positives = 78/160 (49%), Gaps = 8/160 (5%)
Query 49 GHALVSQSGLLFGSLWVTLKVTLLAFICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVT 108
GH L+ Q+ W L ++L A I + + L +S + + + Q
Sbjct 12 GHNLLVQT-------WQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTV 64
Query 109 PIVAIAPLVIIWIQNTTLALVVCAMLVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQ 168
P +AI +I ++ TL ++ + A+ PIL NT +G+R V+ L+ + + WQ
Sbjct 65 PSLAILAFIIPFLGVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQ 124
Query 169 VLMRLRVPNALPYFFGGLRISSGLALIGAVVSEFVAGTGG 208
+++ + +PN++ G+R+S+ + A ++ ++ G GG
Sbjct 125 LIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYI-GAGG 163
>E0SCY2 Glycine betaine/choline transport system permease protein
OusW [Dickeya dadantii (strain 3937)]
Length=406
Score = 67.0 bits (162), Expect = 3e-16
Identities = 62/215 (29%), Positives = 99/215 (46%), Gaps = 17/215 (8%)
Query 16 APLALGVTLLLIWQISLQQMNVPVYLIPKPTDIGHALVSQSGL-LFGSLWVTLKVTLLAF 74
AP+A+ V LL WQ+S M V L +LV+ + + VTL + L A
Sbjct 155 APVAILVFSLLAWQVSSFGMGVATLL---------SLVAIGAIGAWSQAMVTLALVLTAL 205
Query 75 ICAVVIGTLIAFLFVQSRVIEACFMPYAILFQVTP-IVAIAPLVIIWIQNTTLALVVCAM 133
V+IG + S P Q TP V + P+V+++ +VV +
Sbjct 206 FFCVIIGLPLGIWLAHSDRAARIVRPLLDAMQTTPAFVYLIPIVMLFGIGNVPGVVV-TI 264
Query 134 LVAIFPILTNTTLGLRSVNAGLLNLFQINKASRWQVLMRLRVPNALPYFFGGLRISSGLA 193
+ A+ PI+ T LG+R V A L+ Q AS Q+L ++++P A+P G+ + LA
Sbjct 265 IFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLFKVQLPLAMPTIMAGINQTLMLA 324
Query 194 LIGAVVSEFVAGTGGTSAGLAYQILQAGFQLDLPL 228
L V++ +A GL +L+ +LD+ L
Sbjct 325 LSMVVIASMIA-----VGGLGQMVLRGIGRLDMGL 354
Lambda K H a alpha
0.333 0.144 0.439 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 712842
Database: 5b34430ef15c4326f9da1a3dfb44ce8c.SwissProt.fasta
Posted date: May 8, 2024 2:49 PM
Number of letters in database: 3,813
Number of sequences in database: 14
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
