BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f48cdfda981a18f0a17e03d8b0c56dce.SwissProt.fasta
11 sequences; 5,094 total letters
Query= ACIAD1489
Length=397
Score E
Sequences producing significant alignments: (Bits) Value
Q7ANN5 Type I secretion system membrane fusion protein PrsE [Rhiz... 152 4e-45
P16534 Leukotoxin secretion protein D [Mannheimia haemolytica] 142 3e-41
P55125 Leukotoxin secretion protein D [Pasteurella haemolytica-li... 138 9e-40
P0DKX9 Protein CyaD [Bordetella pertussis (strain Tohama I / ATCC... 133 3e-38
J7QCA7 Protein CyaD [Bordetella pertussis (strain ATCC 9797 / DSM... 133 3e-38
P09986 Hemolysin secretion protein D, chromosomal [Escherichia coli] 132 1e-37
P06739 Hemolysin secretion protein D, plasmid [Escherichia coli] 128 3e-36
Q08633 RTX-III toxin determinant D [Actinobacillus pleuropneumoniae] 123 2e-34
P18790 Leukotoxin export protein LtxD [Aggregatibacter actinomyce... 119 4e-33
P26761 RTX-I toxin determinant D [Actinobacillus pleuropneumoniae] 114 3e-31
Q03025 Alkaline protease secretion protein AprE [Pseudomonas aeru... 111 2e-30
>Q7ANN5 Type I secretion system membrane fusion protein PrsE [Rhizobium
meliloti (strain 1021)]
Length=439
Score = 152 bits (383), Expect = 4e-45
Identities = 128/432 (30%), Positives = 202/432 (47%), Gaps = 59/432 (14%)
Query 20 PLPRASLIIWIVGIALVILVV------WAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGI 73
P R SL ++G++++ L + WA +L G VI + +Q L GGI
Sbjct 10 PTARRSLSRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGI 69
Query 74 LTKLDVKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRAEVNGTPLAFPD 133
+ +L VKEGD V+ GQ+L +LD T +N+ +S L A ARL+AE G +
Sbjct 70 VGELLVKEGDRVEAGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERMGAASFEIE 129
Query 134 EVKQE-------PKLVQEETALYNSRR--------------ANLEETVAGL-------KQ 165
E E KL++ E L+ SRR A L + V GL ++
Sbjct 130 EDLAEFIPGTAAAKLIEGEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLNAIEE 189
Query 166 ALHLVQQELVMTEPLVAKGAASEVEVLRLKREANDLQN---KINDARSSYYVKA------ 216
AL L+ +EL + L +G V LKR+ +L+ + AR+ K+
Sbjct 190 ALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQRAELEGGRGRHIAARAQARGKSSEIDLQ 249
Query 217 --------REELSKSNTDVQTQQQVIKGR----TDTLNRTVFKAPVRGVVKEITVTTLGG 264
R E+SK TDV+ + + R TD L R AP+ G + ++ + T+ G
Sbjct 250 ILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIHTVNG 309
Query 265 VVPQNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVI 324
V+ LM +VP E L +EA++ DI IR GQ ++ +A++ ++ +V +
Sbjct 310 VINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAEVVTV 369
Query 325 SPDTIRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLK 384
+PD + DE + YY + IR ++ L K ++ PGM A V IK +T++ YL K
Sbjct 370 APDLVTDE-RTGASYYPLRIRPKAESLAKL--KGLSLYPGMPAEVFIKIADRTVISYLTK 426
Query 385 PF-NKAKEALRE 395
P ++ + A RE
Sbjct 427 PLTDQMRHAFRE 438
>P16534 Leukotoxin secretion protein D [Mannheimia haemolytica]
Length=478
Score = 142 bits (358), Expect = 3e-41
Identities = 110/429 (26%), Positives = 208/429 (48%), Gaps = 53/429 (12%)
Query 19 PPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTKLD 78
P + LI +++ + LV+ +V A V K+E V+T GK+ S + + I+ ++ I+ ++
Sbjct 52 PVSKKPRLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIF 111
Query 79 VKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRA-----EVNGTPLA--- 130
VK+G V+KGQ+L L +++ ++ + L A+ + R + E P+
Sbjct 112 VKDGQFVEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAIEKESLPVIDLS 171
Query 131 ---FPDEVKQE----PKLVQEE-----------TALYNSRRANLEETVAGLKQ---ALHL 169
F D +++ L++E+ T Y + A + A +++ A +
Sbjct 172 RTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRI 231
Query 170 VQQELVMTEPLVAKGAASEVEVLRLKREANDLQNKINDARSSY------YVKAREELS-- 221
Q++ + L + + S+ E+L + + + QN++ RS + +EEL
Sbjct 232 EQEKFKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELI 291
Query 222 ----------KSNTDVQTQQQV---IKGRTDTLNRTVFKAPVRGVVKEITVTTLGGVVPQ 268
K ++ ++Q+ ++ ++ +APV G V+++ + T+GGVV
Sbjct 292 TQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTT 351
Query 269 NGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVISPDT 328
LM IVP D+ L A + +DI F+ GQE ++K+ + Y+ YG + G++ ISPD
Sbjct 352 AETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDA 411
Query 329 IRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKPFNK 388
I E + I D L + G+ +++ GM T +IKTG++++M YLL P +
Sbjct 412 I--EQPNVGLVFNATIAIDRKNLTSPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLEE 469
Query 389 A-KEALRER 396
+ E+LRER
Sbjct 470 SVTESLRER 478
Score = 18.5 bits (36), Expect = 4.5
Identities = 7/23 (30%), Positives = 12/23 (52%), Gaps = 0/23 (0%)
Query 5 QQEKARSLNVSYKEPPLPRASLI 27
+QEK + YK+ L + L+
Sbjct 232 EQEKFKDFKALYKQKSLSKHELL 254
>P55125 Leukotoxin secretion protein D [Pasteurella haemolytica-like
sp. (strain 5943B)]
Length=478
Score = 138 bits (347), Expect = 9e-40
Identities = 112/429 (26%), Positives = 206/429 (48%), Gaps = 53/429 (12%)
Query 19 PPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTKLD 78
P + LI +++ + L + +V A V K+E V+T GK+ S + + I+ ++ I+ ++
Sbjct 52 PVSKKPRLIAYLIMLFLAVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENTIVQEIF 111
Query 79 VKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRA-----EVNGTPLA--- 130
VK+G V+KGQ+L L +++ ++ + L A+ + R + E P+
Sbjct 112 VKDGQFVEKGQLLVSLTALGSDADIKKTITSLSLAKLENYRYQTLLTAIEKESLPVIDLS 171
Query 131 ---FPDEVKQE----PKLVQEE-----------TALYNSRRANLEETVAGLKQ---ALHL 169
F D +++ L++E+ T Y + A + A +++ A +
Sbjct 172 NTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKDAEKQTISAYVRKYEGATRI 231
Query 170 VQQELVMTEPLVAKGAASEVEVLRLKREANDLQNKINDARS------SYYVKAREELS-- 221
Q++L L + + S+ E+L + +A + QN++ RS S + +EEL
Sbjct 232 EQEKLKDFRKLYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELESDLLNVKEELELI 291
Query 222 ----------KSNTDVQTQQQV---IKGRTDTLNRTVFKAPVRGVVKEITVTTLGGVVPQ 268
K ++ ++Q+ ++ ++ +APV G V+++ + T+GGVV
Sbjct 292 TQFFKSDVLEKLKQHIENERQLQLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTT 351
Query 269 NGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVISPDT 328
LM IVP D+ L A I +DI F+ GQE ++K+ + Y+ YG + G++ ISPD
Sbjct 352 AETLMIIVPEDDVLEATALIQNKDIGFVAAGQEVIIKVETFPYTRYGYITGRIKHISPDA 411
Query 329 IRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKPFNK 388
I E + + D L + G + GM T +IKTG++++M YLL P +
Sbjct 412 I--EQPNLGLVFNATVSIDKQALSSPDGHKIELGLGMTITAEIKTGERSVMSYLLSPLEE 469
Query 389 A-KEALRER 396
+ E+LRER
Sbjct 470 SVTESLRER 478
>P0DKX9 Protein CyaD [Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251)]
Length=440
Score = 133 bits (334), Expect = 3e-38
Identities = 113/404 (28%), Positives = 194/404 (48%), Gaps = 27/404 (7%)
Query 14 VSYKEPPL-PRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGG 72
+S +E P+ P A + I+ +VW+ V K E V GKV+P + ++I + + G
Sbjct 43 LSLQERPISPTARWLARILMALAAGALVWSVVGKTEIVVHAAGKVVPVGQSKIIAASETG 102
Query 73 ILTKLDVKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATS--ARLRAEVNGTPLA 130
+ ++ V + V G +L +LD + E + + AAQA AR RA +
Sbjct 103 RVARVLVADNSRVAAGDVLLRLDAG--VTEAEERKWRVQAAQARQDEARSRAMIRALDTG 160
Query 131 FPD---EVKQEPKLVQEETAL------YNSRRANLEETVAGLKQALHLVQQELVMTEPLV 181
E+ +P ++ ++ L Y ++ ++E +A ++ L LV Q L
Sbjct 161 RAPVLAELPADPGMMAAQSYLDSQYADYQAQLRSIEAAIATYRRELGLVTQIAHAHRGLR 220
Query 182 AKGAASEVEVLRLKREANDLQNKINDA---RSSYYVKAREELSKS-----NTDVQTQQQV 233
G S+ L ++ L+ ++ + R++ + R + ++ Q +Q++
Sbjct 221 RDGDVSQQAYLEKEQARMTLEGRLRQSEAQRAALQTQTRRQAFETLVLARKLAAQAEQEI 280
Query 234 IKGRTDTLNRTVFKAPVRGVVKEITVTTLGGVVPQNGKLMTIVPLDEQLLIEARILPRDI 293
+ +R V APV GVV+++ T G V LM +VP + ++A++ +DI
Sbjct 281 ARTSAQR-SRLVLTAPVDGVVQQLVALTEGTAVAATQPLMMVVPSGAGIQVQAQLDSKDI 339
Query 294 AFIRPGQEALVKITAYDYSIYGGMKGKVTVISPDTIRDEVKQDQFYYRVYIRTDSDKLYN 353
F+R G A VK+ AYDY+ YG ++GKV +SPDT+ D+ + Q YRV I L
Sbjct 340 GFVRAGAPATVKVGAYDYTKYGTLEGKVLYVSPDTVVDD--RQQHSYRVTIALAHPAL-E 396
Query 354 KAGKAFNITPGMVATVDIKTGQKTIMDYLLKPFNK-AKEALRER 396
GK + GM DI+TG + +++YLL P + A E+L ER
Sbjct 397 VDGKPRLLKEGMAVQADIRTGSRRLIEYLLSPVARHAGESLGER 440
>J7QCA7 Protein CyaD [Bordetella pertussis (strain ATCC 9797 /
DSM 5571 / NCTC 10739 / 18323)]
Length=440
Score = 133 bits (334), Expect = 3e-38
Identities = 113/404 (28%), Positives = 194/404 (48%), Gaps = 27/404 (7%)
Query 14 VSYKEPPL-PRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGG 72
+S +E P+ P A + I+ +VW+ V K E V GKV+P + ++I + + G
Sbjct 43 LSLQERPISPTARWLARILMALAAGALVWSVVGKTEIVVHAAGKVVPVGQSKIIAASETG 102
Query 73 ILTKLDVKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATS--ARLRAEVNGTPLA 130
+ ++ V + V G +L +LD + E + + AAQA AR RA +
Sbjct 103 RVARVLVADNSRVAAGDVLLRLDAG--VTEAEERKWRVQAAQARQDEARSRAMIRALDTG 160
Query 131 FPD---EVKQEPKLVQEETAL------YNSRRANLEETVAGLKQALHLVQQELVMTEPLV 181
E+ +P ++ ++ L Y ++ ++E +A ++ L LV Q L
Sbjct 161 RAPVLAELPADPGMMAAQSYLDSQYADYQAQLRSIEAAIATYRRELGLVTQIAHAHRGLR 220
Query 182 AKGAASEVEVLRLKREANDLQNKINDA---RSSYYVKAREELSKS-----NTDVQTQQQV 233
G S+ L ++ L+ ++ + R++ + R + ++ Q +Q++
Sbjct 221 RDGDVSQQAYLEKEQARMTLEGRLRQSEAQRAALQTQTRRQAFETLVLARKLAAQAEQEI 280
Query 234 IKGRTDTLNRTVFKAPVRGVVKEITVTTLGGVVPQNGKLMTIVPLDEQLLIEARILPRDI 293
+ +R V APV GVV+++ T G V LM +VP + ++A++ +DI
Sbjct 281 ARTSAQR-SRLVLTAPVDGVVQQLVALTEGTAVAATQPLMMVVPSGAGIQVQAQLDSKDI 339
Query 294 AFIRPGQEALVKITAYDYSIYGGMKGKVTVISPDTIRDEVKQDQFYYRVYIRTDSDKLYN 353
F+R G A VK+ AYDY+ YG ++GKV +SPDT+ D+ + Q YRV I L
Sbjct 340 GFVRAGAPATVKVGAYDYTKYGTLEGKVLYVSPDTVVDD--RQQHSYRVTIALAHPAL-E 396
Query 354 KAGKAFNITPGMVATVDIKTGQKTIMDYLLKPFNK-AKEALRER 396
GK + GM DI+TG + +++YLL P + A E+L ER
Sbjct 397 VDGKPRLLKEGMAVQADIRTGSRRLIEYLLSPVARHAGESLGER 440
>P09986 Hemolysin secretion protein D, chromosomal [Escherichia
coli]
Length=478
Score = 132 bits (332), Expect = 1e-37
Identities = 112/431 (26%), Positives = 210/431 (49%), Gaps = 57/431 (13%)
Query 19 PPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTKLD 78
P R L+ + + LVI + + + ++E V+T GK+ S + + I+ ++ I+ ++
Sbjct 52 PVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVKEII 111
Query 79 VKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRA-----EVNGTP-LAFP 132
VKEG+ V+KG +L +L ++ ++QS L+ A+ R + E+N P L P
Sbjct 112 VKEGESVRKGDVLLKLTALGAEADTLKTQSSLLQARLEQIRYQILSRSIELNKLPELKLP 171
Query 133 DE----------VKQEPKLVQEETALYNSR--------------------RANLEETVAG 162
DE V + L++E+ + + ++ R N E V+
Sbjct 172 DEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRYENVSR 231
Query 163 LKQALHLVQQELVMTEPLVAKGAASEVE--------VLRL-KREANDLQNKINDARSSYY 213
++++ L ++ + +AK A E E LR+ K + ++++I A+ Y
Sbjct 232 VEKS-RLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAKEEYQ 290
Query 214 VKAR-------EELSKSNTDVQTQQQVIKGRTDTLNRTVFKAPVRGVVKEITVTTLGGVV 266
+ + ++L ++ ++ ++ + +V +APV G V+++ V T GGVV
Sbjct 291 LVTQLFKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTEGGVV 350
Query 267 PQNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVISP 326
LM IVP D+ L + A + +DI FI GQ A++K+ A+ Y+ YG + GKV I+
Sbjct 351 TTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVKNINL 410
Query 327 DTIRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKPF 386
D I D+ + + V + + + L + K ++ GM T +IKTG ++++ YLL P
Sbjct 411 DAIEDQ--KLGLVFNVIVSVEENDL-STGNKHIPLSSGMAVTAEIKTGMRSVISYLLSPL 467
Query 387 NKA-KEALRER 396
++ E+L ER
Sbjct 468 EESVTESLHER 478
>P06739 Hemolysin secretion protein D, plasmid [Escherichia coli]
Length=478
Score = 128 bits (322), Expect = 3e-36
Identities = 113/430 (26%), Positives = 209/430 (49%), Gaps = 55/430 (13%)
Query 19 PPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTKLD 78
P R L+ + + LVI + + + ++E V+T GK+ S + + I+ ++ I+ ++
Sbjct 52 PVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTHSGRSKEIKPIENSIVKEII 111
Query 79 VKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRA-----EVNGTP-LAFP 132
VKEG+ V+KG +L +L ++ ++QS L+ A+ R + E+N P L P
Sbjct 112 VKEGESVRKGDVLLKLTALGAEADTLKTQSSLLQARLEQTRYQILSRSIELNKLPELKLP 171
Query 133 DE----------VKQEPKLVQEETALYNS-----------RRANLEETVAGLKQALHLVQ 171
DE V + L++E+ + + + +RA +A + + +L +
Sbjct 172 DEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTVLARINRYENLSR 231
Query 172 QEL--------VMTEPLVAKGAASE--------VEVLRL-KREANDLQNKINDARSSYYV 214
E ++ + +AK A E V LR+ K + ++++I A+ Y +
Sbjct 232 VEKSRLDDFSSLLHKQAIAKHAVLEQENKYVEAVNELRVYKSQLEQIESEILSAKEEYQL 291
Query 215 KAR-------EELSKSNTDVQTQQQVIKGRTDTLNRTVFKAPVRGVVKEITVTTLGGVVP 267
+ ++L ++ ++ + + +V +APV V+++ V T GGVV
Sbjct 292 VTQLFKNEILDKLRQTTDNIGLLTLELAKNEERQQASVIRAPVSVKVQQLKVHTEGGVVT 351
Query 268 QNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVISPD 327
LM IVP D+ L + A + +DI FI GQ A++K+ A+ Y+ YG + GKV I+ D
Sbjct 352 TAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVKNINLD 411
Query 328 TIRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKPFN 387
I D+ + + V I + + L + K ++ GM T +IKTG ++++ YLL P
Sbjct 412 AIEDQ--RLGLVFNVIISIEENCL-STGNKNIPLSSGMAVTAEIKTGMRSVISYLLSPLE 468
Query 388 KA-KEALRER 396
++ E+LRER
Sbjct 469 ESVTESLRER 478
>Q08633 RTX-III toxin determinant D [Actinobacillus pleuropneumoniae]
Length=477
Score = 123 bits (309), Expect = 2e-34
Identities = 113/430 (26%), Positives = 203/430 (47%), Gaps = 56/430 (13%)
Query 19 PPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTKLD 78
P + LI +++ + L + +V + + K+E V++ TGK++ S + I+ ++ ++ +
Sbjct 52 PISKKPRLIAYLIMLFLFLAIVISIISKVEIVASATGKLVFSGHSKEIKPIENALVKDIF 111
Query 79 VKEGDIVQKGQILAQL-----DPTRFASNVGESQSLLMAAQATSARLRAEVNGTPL---- 129
VK+G V+KGQ+L L D + + V L + S E N PL
Sbjct 112 VKDGQFVEKGQLLLNLTALGCDADKQKTKVSLGLERLDGYRYKSLLYSIEHNRLPLLDFN 171
Query 130 -AFPDEVKQEPKL-----------------VQEETALYNSRRANLEETVAGLKQ---ALH 168
A D V++E K Q+E A Y ++A + +A +++ A
Sbjct 172 QADFDSVQEEDKTGARHLITEQFETWQKQKYQKELA-YQRKQAEKQTVLANIRKYESASR 230
Query 169 LVQQELVMTEPLVAKGAASEVEVLRLKREANDLQNKINDARS------SYYVKAREELS- 221
+ +++L + L + S+ E+L + + N+++ +S S +KA+E+L
Sbjct 231 IEKEKLSDLKKLYDVKSISKHELLAQENRYVEASNELSVYQSHLKEVESDLLKAQEDLKL 290
Query 222 -----KSNTDVQTQQQVIKGRTDTLN---------RTVFKAPVRGVVKEITVTTLGGVVP 267
KS+ + QQ + + + TL ++ +APV G V+++ T GGVV
Sbjct 291 VTQLFKSDILEKLQQNIQREKQLTLELEKNEQRQLASIIRAPVSGTVQQLKTHTKGGVVT 350
Query 268 QNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVISPD 327
LM I P D+ L + A I +D+ F+ GQEA++K+ + Y+ YG + GKV I+ D
Sbjct 351 TAETLMVIAPEDDVLEVSALIQNKDVGFVEIGQEAVIKVETFPYTRYGYLYGKVKTITLD 410
Query 328 TIRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKPFN 387
I E Q + I + K K + GM +IKTG+++++ +LL P
Sbjct 411 AI--EHPQLGLVFNSIIEINK-KTLTDGDKEIQLGSGMSVIAEIKTGERSVISFLLSPLE 467
Query 388 KA-KEALRER 396
++ E+LRER
Sbjct 468 ESITESLRER 477
>P18790 Leukotoxin export protein LtxD [Aggregatibacter actinomycetemcomitans]
Length=477
Score = 119 bits (299), Expect = 4e-33
Identities = 104/431 (24%), Positives = 197/431 (46%), Gaps = 55/431 (13%)
Query 18 EPPLPRASLII-WIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTK 76
E P+ A + + + + L + ++ + +E ++T +GK S + + I+ ++ ++
Sbjct 50 ETPVSNAPRFVSYSIMLFLTLAIIVSIFSNVEIIATASGKFALSGRSKEIKPIENSLVKH 109
Query 77 LDVKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRAEVNGT--------- 127
+ VKEG+ V+KG++L +L ++ ++++ L A+ R ++ +
Sbjct 110 IFVKEGEYVKKGELLLKLTALGAEADTLKTKTSLSQAKLEEFRYKSLLEAVEKDQLPILD 169
Query 128 ------PLAFPDEVKQEPKLVQEETALY-----------NSRRANLEETVAGLKQALHLV 170
P ++ K+ L++E+ + + N + A +A +K+ L+
Sbjct 170 FSKIDLPFMTENDQKRVTLLIEEQFSTWQKQRHQKTLNLNKKEAEKLSYLARIKKYEGLI 229
Query 171 QQELVMTEPLVAKGAASEVEVLRLKREANDLQNKINDAR----SSYYVKAREELSKSNTD 226
E V + A + + E N Q+ IN+ S V+ L+K +
Sbjct 230 NTEQVRLDDFRALYKEHAIAKHTVLDEENKYQDAINELEVYKASLMQVENEVLLAKEEQE 289
Query 227 VQTQQ------QVIKGRTDTLNRTVF--------------KAPVRGVVKEITVTTLGGVV 266
+ TQ +K TD +N F +APV G V+++ V T+ GVV
Sbjct 290 LVTQLFKNDILDKLKQATDNVNLLTFELDKNNQRQQVSEIRAPVSGTVQQLKVHTIDGVV 349
Query 267 PQNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVISP 326
LM +VP ++ L + A I +DI F++ GQE ++K+ A+ Y+ YG + GKV I+
Sbjct 350 TTAETLMVVVPEEDSLEVTALIQNKDIGFVKEGQEVVIKVEAFPYTRYGYLTGKVKNITL 409
Query 327 DTIRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKPF 386
D I E + + I D K + K ++ GM T +IKTG ++++ YLL P
Sbjct 410 DAI--EHPKLGLVFNTIIELDK-KTLSTEEKEIPLSAGMEITAEIKTGMRSVISYLLSPL 466
Query 387 NKA-KEALRER 396
++ ++LRER
Sbjct 467 EESIDKSLRER 477
>P26761 RTX-I toxin determinant D [Actinobacillus pleuropneumoniae]
Length=477
Score = 114 bits (285), Expect = 3e-31
Identities = 107/432 (25%), Positives = 200/432 (46%), Gaps = 60/432 (14%)
Query 19 PPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTKLD 78
P + LI +++ + L + +V + V +E V+T TGK+ S + + I+ ++ ++ ++
Sbjct 52 PVSKKPRLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSGRSKEIKPIENALVKEIF 111
Query 79 VKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRAEV-------NGTPLA- 130
V++G V+K Q+L L T ++ + ++ + R R E+ + PL
Sbjct 112 VEDGQFVEKDQLLLHL--TALGADADQQKTKSSLSLTKLERYRYEILLEAVAADRLPLIE 169
Query 131 -FPDEVKQ--------------------EPKLVQEETALYNSRRANLEETVAGLKQ---A 166
DE K + + Q+E AL R A + +A +++ +
Sbjct 170 LTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQR-REAEKQTVLANIRKYEGS 228
Query 167 LHLVQQELVMTEPLVAKGAASEVEVLR--------------LKREANDLQNKINDARSSY 212
+ + L + L + S+ +VL K N++++ + A+
Sbjct 229 SRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEI 288
Query 213 YVKAR----EELSKSNTDVQTQQQV---IKGRTDTLNRTVFKAPVRGVVKEITVTTLGGV 265
++ + + L K +V+ ++Q+ ++ +V +APV V+++ T+GGV
Sbjct 289 HLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPV-SYVQQLKTHTVGGV 347
Query 266 VPQNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVIS 325
V LM I P D+ L + A I +DI FI GQ+A++K+ + Y+ YG + GKV I+
Sbjct 348 VTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKNIT 407
Query 326 PDTIRDEVKQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKP 385
+ I E Q + I D L K GK + GM T +IKTG+++++ YLL P
Sbjct 408 LEAI--EHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYLLSP 465
Query 386 FNKA-KEALRER 396
++ E+LRER
Sbjct 466 LEESVSESLRER 477
>Q03025 Alkaline protease secretion protein AprE [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=432
Score = 111 bits (277), Expect = 2e-30
Identities = 103/407 (25%), Positives = 180/407 (44%), Gaps = 53/407 (13%)
Query 39 VVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTKLDVKEGDIVQKGQILAQLDPTR 98
++WA L++ VI S + + +Q GG++ + V++G V+ G+ L +++PT+
Sbjct 28 LLWAAFAPLDQGVAVPATVIISGQRKSVQHPLGGVVKHILVRDGQHVEAGEPLIRMEPTQ 87
Query 99 FASNVGESQSLLMAAQATSARLRAEVNGT-----PLAFPDEVK----------QEPKLVQ 143
+NV + A+ ARL+AE +G P ++ Q L
Sbjct 88 ARANVDSLLNRYANARLNQARLQAEYDGRRTLEMPAGLAEQAPLPTLGERLELQRQLLHS 147
Query 144 EETALYN---SRRANLEETVA---GLKQA-------LHLVQQELVMTEPLVAKGAASEVE 190
+TAL N + RAN+E A GL+Q L+ +L L +G +
Sbjct 148 RQTALANELSALRANIEGLRAQLEGLRQTEGNQRLQQRLLNSQLSGARDLAEEGYMPRNQ 207
Query 191 VLRLKREANDLQNKIND------------ARSSYYVKAREELSKSNTDVQTQQQVIKGRT 238
+L +R+ ++ ++++ A + + REE + + Q + + RT
Sbjct 208 LLEQERQLAEVNARLSESSGRFGQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNART 267
Query 239 ---------DTLNRTVFKAPVRGVVKEITVTTLGGVVPQNGKLMTIVPLDEQLLIEARIL 289
L +APV G V + V T GGV+ LM IVP + L +E ++
Sbjct 268 LWEELSSARYELRHAEIRAPVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLA 327
Query 290 PRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTVISPDTIRDEVKQDQFYYRVYIRTDSD 349
+ I G + TA++ S + G+VT++S D + DE + +Y +R D
Sbjct 328 VNLVDRIHSGLPVEMLFTAFNQSKTPRVTGEVTMVSADRLLDEQNKQPYY---ALRAQVD 384
Query 350 KLYNKAGKAFNITPGMVATVDIKTGQKTIMDYLLKP-FNKAKEALRE 395
K I PGM V ++TG++++++YL KP F++A AL E
Sbjct 385 AAAMGKLKGLQIRPGMAVQVFVRTGERSLLNYLFKPLFDRAHVALAE 431
Lambda K H a alpha
0.317 0.133 0.364 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1593534
Database: f48cdfda981a18f0a17e03d8b0c56dce.SwissProt.fasta
Posted date: May 9, 2024 1:45 AM
Number of letters in database: 5,094
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
