BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3c764ecb270b4d9935cb9df90a335e80.SwissProt.fasta
23 sequences; 14,874 total letters
Query= ACIAD1515
Length=611
Score E
Sequences producing significant alignments: (Bits) Value
O31708 Uncharacterized ABC transporter ATP-binding protein YknV [... 348 5e-115
Q2YU20 Putative multidrug export ATP-binding/permease protein SAB... 305 6e-99
Q6GFJ1 Putative multidrug export ATP-binding/permease protein SAR... 303 5e-98
Q7A0J1 Putative multidrug export ATP-binding/permease protein MW1... 303 5e-98
Q7A4T3 Putative multidrug export ATP-binding/permease protein SA1... 303 5e-98
Q2G2M9 Putative multidrug export ATP-binding/permease protein SAO... 303 5e-98
Q99T13 Putative multidrug export ATP-binding/permease protein SAV... 303 5e-98
Q9WYC4 Uncharacterized ABC transporter ATP-binding protein TM_028... 302 1e-97
P71082 Putative multidrug export ATP-binding/permease protein Yga... 287 6e-92
P54719 Uncharacterized ABC transporter ATP-binding protein YfiC [... 282 6e-90
P45861 Uncharacterized ABC transporter ATP-binding protein YwjA [... 274 3e-87
Q6AJW3 ATP-dependent lipid A-core flippase [Desulfotalea psychrop... 273 9e-87
O31707 Uncharacterized ABC transporter ATP-binding protein YknU [... 271 5e-86
P9WQJ2 Fatty acid ABC transporter ATP-binding/permease protein [M... 272 1e-85
P63398 Fatty acid ABC transporter ATP-binding/permease protein [M... 272 1e-85
P9WQJ3 Fatty acid ABC transporter ATP-binding/permease protein [M... 272 1e-85
P35598 Putative ABC transporter ATP-binding protein exp8 [Strepto... 270 1e-85
P44407 ATP-dependent lipid A-core flippase [Haemophilus influenza... 258 4e-81
O07549 Probable multidrug resistance ABC transporter ATP-binding/... 254 2e-78
P60752 ATP-dependent lipid A-core flippase [Escherichia coli (str... 251 3e-78
O53645 Multidrug efflux ATP-binding/permease protein Rv0194 [Myco... 259 8e-78
A1KF14 Multidrug efflux ATP-binding/permease protein BCG_0231 [My... 259 8e-78
Q9KQW9 ATP-dependent lipid A-core flippase [Vibrio cholerae serot... 235 2e-72
>O31708 Uncharacterized ABC transporter ATP-binding protein YknV
[Bacillus subtilis (strain 168)]
Length=604
Score = 348 bits (892), Expect = 5e-115
Identities = 201/572 (35%), Positives = 329/572 (58%), Gaps = 9/572 (2%)
Query 35 KLIPLVYPIRYLLLALIAVEILQVMSV-FVRPWVVK-YILDSGFQHIAEKMVLNQPVLSI 92
+L+ V P R +L L + +L +V V P ++ Y+LD Q I + N +L
Sbjct 32 RLLSYVKPYRKTILPLSFLTVLIGTAVKLVIPILIGVYVLD---QAITGR---NSELLIQ 85
Query 93 AISILTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIIS 152
I I++ ++ +A + + VI LR+ LF H+Q L+ +FD+ AG I+
Sbjct 86 LIFIISGLYVLNYAANVLRIRWMNQLGQHVIYDLRQHLFTHVQRLSHRFFDQRSAGSILV 145
Query 153 RADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAIFK 212
R D+ +L+ + G LL+ +L ++L+ + P + TLPI+F ++ +
Sbjct 146 RIMNDINSLQELFTSGVINLLTDLLLLAGVIIILFTLSPELTIAIMVTLPIMFFISTSLR 205
Query 213 KSSQKHWGRVAEERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSK 272
K ++ W V ++S+ +HL E++ G ++ Q + N + + + ++ S ++
Sbjct 206 KKIRRSWQTVRLKQSKLNSHLNESIQGIRVTQAFTQEEENMAYFDGVNQENYESWREATR 265
Query 273 RTSWFAPFTGLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFE 332
+ + F P + + + TA I G+ ++ I+IG F FY+ +F P+ L ++
Sbjct 266 KNAMFRPLVEMTNAIGTAVLIWYGATLIMNETITIGVFVSFAFYLGMFWEPISRLGQVYN 325
Query 333 RYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQK-PVLQNFNLE 391
+ G A ++RIF LD Q + E+PNA E++NG I F+ V F+Y +K L +
Sbjct 326 QLLMGMASSERIFEFLDEQPNVKEKPNAIHNEKINGEISFEEVEFSYDEKRKALHAVSFS 385
Query 392 IEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQD 451
I AG +A+VG TG GK+T+ L++RFY+ G I +D PI+D+ L SLR +SIVLQD
Sbjct 386 IPAGSTLALVGHTGSGKTTIANLISRFYDAAGGTIKIDGIPIKDLSLASLRSQISIVLQD 445
Query 452 NVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQR 511
+FSGTI++N+R +P+ASD+++++ + +GADE + L + Y TEV G LS GQR
Sbjct 446 TFIFSGTIMENIRFGRPNASDEEVMKASQAVGADEFISDLAEGYATEVEERGSVLSAGQR 505
Query 512 QLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKAD 571
QL+ RA LA+P I+ILDEAT++ID TE KIQ AL+ L + RT ++IAHRLSTIR AD
Sbjct 506 QLISFARALLADPAIIILDEATASIDTETEVKIQQALKTLLKGRTAVMIAHRLSTIRDAD 565
Query 572 KIVVIENGYVVEEGSHDHLIQQQSAYFQLYQS 603
+I+V+++G +EEG+HD L+ + Y L ++
Sbjct 566 RIIVLDHGRKIEEGNHDQLLAKGGIYAGLVKA 597
>Q2YU20 Putative multidrug export ATP-binding/permease protein
SAB1799c [Staphylococcus aureus (strain bovine RF122 / ET3-1)]
Length=578
Score = 305 bits (781), Expect = 6e-99
Identities = 200/583 (34%), Positives = 312/583 (54%), Gaps = 23/583 (4%)
Query 32 MLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLS 91
M+K+ + V P +Y + A I V I++ + P ++KY +D + A L+
Sbjct 1 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT 60
Query 92 IAISI-LTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRI 150
IAI I L + I R + + +YL+ + K++ +R+ L+ H+Q+L+ ++ + G++
Sbjct 61 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV 120
Query 151 ISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAI 210
ISR DVE + ++ G L++ L C + L + FF + TL LF +
Sbjct 121 ISRVINDVEQTKDFILTG---LMNIWLDCITIIIALSIM---FFLDVKLTLAALF-IFPF 173
Query 211 FKKSSQKHWGRVAE---ERSRFTAH----LVETVNGAKIIQQLNYTQTNQSRYQELLKDF 263
+ + +GR+ + ERS+ A L E V G +++ + K
Sbjct 174 YILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFD---KKN 230
Query 264 NNSIIYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLF 320
N + K T W A ++T+ G I++ G+Y I++G A + Y+ L
Sbjct 231 ANFLTRALKHTRWNAYSFATINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELL 290
Query 321 LAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT 380
PL+ L F A R+F L+D I A +E G I VNF Y
Sbjct 291 FGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIYHVNFQYN 350
Query 381 --QKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHL 438
+ P+L++ NL IE G+ +A VG +G GKST++ L+ RFY+ G I +D + I+D
Sbjct 351 DNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLT 410
Query 439 GSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTE 498
GSLR + +V QDN+LFS T+ +N+ L +P A+D+++++V + A + + LPQ Y TE
Sbjct 411 GSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEVAKVANAHDFIMNLPQGYDTE 470
Query 499 VGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCI 558
VG G LS GQ+Q + + R +L NP ILILDEATSA+D+ +E IQ AL L ++RT +
Sbjct 471 VGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTL 530
Query 559 VIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
++AHRLSTI ADKIVVIENG++VE G+H LI +Q AY LY
Sbjct 531 IVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLY 573
>Q6GFJ1 Putative multidrug export ATP-binding/permease protein
SAR1956 [Staphylococcus aureus (strain MRSA252)]
Length=578
Score = 303 bits (775), Expect = 5e-98
Identities = 198/583 (34%), Positives = 311/583 (53%), Gaps = 23/583 (4%)
Query 32 MLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLS 91
M+K+ + V P +Y + A I V I++ + P ++KY +D + A L+
Sbjct 1 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT 60
Query 92 IAISI-LTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRI 150
IAI I L + I R + + +YL+ + K++ +R+ L+ H+Q+L+ ++ + G++
Sbjct 61 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV 120
Query 151 ISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAI 210
ISR DVE + ++ G L++ L C + L + FF + TL LF +
Sbjct 121 ISRVINDVEQTKDFILTG---LMNIWLDCITIIIALSIM---FFLDVKLTLAALF-IFPF 173
Query 211 FKKSSQKHWGRVAE---ERSRFTAH----LVETVNGAKIIQQLNYTQTNQSRYQELLKDF 263
+ + +GR+ + ERS+ A L E V G +++ + K
Sbjct 174 YILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFD---KKN 230
Query 264 NNSIIYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLF 320
N + K T W A ++T+ G I++ G+Y I++G A + Y+ L
Sbjct 231 TNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELL 290
Query 321 LAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT 380
PL+ L F A R+F L+D I A +E G I V+F Y
Sbjct 291 FGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYN 350
Query 381 --QKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHL 438
+ P+L++ NL IE G+ +A VG +G GKST++ L+ RFY+ G I +D + I+D
Sbjct 351 DNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLT 410
Query 439 GSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTE 498
GSLR + +V QDN+LFS T+ +N+ L +P A+D+++++ + A + + LPQ Y TE
Sbjct 411 GSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTE 470
Query 499 VGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCI 558
VG G LS GQ+Q + + R +L NP ILILDEATSA+D+ +E IQ AL L ++RT +
Sbjct 471 VGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTL 530
Query 559 VIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
++AHRLSTI ADKIVVIENG++VE G+H LI +Q AY LY
Sbjct 531 IVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLY 573
>Q7A0J1 Putative multidrug export ATP-binding/permease protein
MW1806 [Staphylococcus aureus (strain MW2)]
Length=578
Score = 303 bits (775), Expect = 5e-98
Identities = 198/583 (34%), Positives = 311/583 (53%), Gaps = 23/583 (4%)
Query 32 MLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLS 91
M+K+ + V P +Y + A I V I++ + P ++KY +D + A L+
Sbjct 1 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT 60
Query 92 IAISI-LTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRI 150
IAI I L + I R + + +YL+ + K++ +R+ L+ H+Q+L+ ++ + G++
Sbjct 61 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV 120
Query 151 ISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAI 210
ISR DVE + ++ G L++ L C + L + FF + TL LF +
Sbjct 121 ISRVINDVEQTKDFILTG---LMNIWLDCITIIIALSIM---FFLDVKLTLAALF-IFPF 173
Query 211 FKKSSQKHWGRVAE---ERSRFTAH----LVETVNGAKIIQQLNYTQTNQSRYQELLKDF 263
+ + +GR+ + ERS+ A L E V G +++ + K
Sbjct 174 YILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFD---KKN 230
Query 264 NNSIIYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLF 320
N + K T W A ++T+ G I++ G+Y I++G A + Y+ L
Sbjct 231 TNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELL 290
Query 321 LAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT 380
PL+ L F A R+F L+D I A +E G I V+F Y
Sbjct 291 FGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYN 350
Query 381 --QKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHL 438
+ P+L++ NL IE G+ +A VG +G GKST++ L+ RFY+ G I +D + I+D
Sbjct 351 DNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLT 410
Query 439 GSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTE 498
GSLR + +V QDN+LFS T+ +N+ L +P A+D+++++ + A + + LPQ Y TE
Sbjct 411 GSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTE 470
Query 499 VGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCI 558
VG G LS GQ+Q + + R +L NP ILILDEATSA+D+ +E IQ AL L ++RT +
Sbjct 471 VGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTL 530
Query 559 VIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
++AHRLSTI ADKIVVIENG++VE G+H LI +Q AY LY
Sbjct 531 IVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLY 573
>Q7A4T3 Putative multidrug export ATP-binding/permease protein
SA1683 [Staphylococcus aureus (strain N315)]
Length=578
Score = 303 bits (775), Expect = 5e-98
Identities = 198/583 (34%), Positives = 311/583 (53%), Gaps = 23/583 (4%)
Query 32 MLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLS 91
M+K+ + V P +Y + A I V I++ + P ++KY +D + A L+
Sbjct 1 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT 60
Query 92 IAISI-LTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRI 150
IAI I L + I R + + +YL+ + K++ +R+ L+ H+Q+L+ ++ + G++
Sbjct 61 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV 120
Query 151 ISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAI 210
ISR DVE + ++ G L++ L C + L + FF + TL LF +
Sbjct 121 ISRVINDVEQTKDFILTG---LMNIWLDCITIIIALSIM---FFLDVKLTLAALF-IFPF 173
Query 211 FKKSSQKHWGRVAE---ERSRFTAH----LVETVNGAKIIQQLNYTQTNQSRYQELLKDF 263
+ + +GR+ + ERS+ A L E V G +++ + K
Sbjct 174 YILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFD---KKN 230
Query 264 NNSIIYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLF 320
N + K T W A ++T+ G I++ G+Y I++G A + Y+ L
Sbjct 231 TNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELL 290
Query 321 LAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT 380
PL+ L F A R+F L+D I A +E G I V+F Y
Sbjct 291 FGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYN 350
Query 381 --QKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHL 438
+ P+L++ NL IE G+ +A VG +G GKST++ L+ RFY+ G I +D + I+D
Sbjct 351 DNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLT 410
Query 439 GSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTE 498
GSLR + +V QDN+LFS T+ +N+ L +P A+D+++++ + A + + LPQ Y TE
Sbjct 411 GSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTE 470
Query 499 VGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCI 558
VG G LS GQ+Q + + R +L NP ILILDEATSA+D+ +E IQ AL L ++RT +
Sbjct 471 VGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTL 530
Query 559 VIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
++AHRLSTI ADKIVVIENG++VE G+H LI +Q AY LY
Sbjct 531 IVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLY 573
>Q2G2M9 Putative multidrug export ATP-binding/permease protein
SAOUHSC_02003 [Staphylococcus aureus (strain NCTC 8325 / PS
47)]
Length=578
Score = 303 bits (775), Expect = 5e-98
Identities = 198/583 (34%), Positives = 311/583 (53%), Gaps = 23/583 (4%)
Query 32 MLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLS 91
M+K+ + V P +Y + A I V I++ + P ++KY +D + A L+
Sbjct 1 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT 60
Query 92 IAISI-LTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRI 150
IAI I L + I R + + +YL+ + K++ +R+ L+ H+Q+L+ ++ + G++
Sbjct 61 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV 120
Query 151 ISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAI 210
ISR DVE + ++ G L++ L C + L + FF + TL LF +
Sbjct 121 ISRVINDVEQTKDFILTG---LMNIWLDCITIIIALSIM---FFLDVKLTLAALF-IFPF 173
Query 211 FKKSSQKHWGRVAE---ERSRFTAH----LVETVNGAKIIQQLNYTQTNQSRYQELLKDF 263
+ + +GR+ + ERS+ A L E V G +++ + K
Sbjct 174 YILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFD---KKN 230
Query 264 NNSIIYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLF 320
N + K T W A ++T+ G I++ G+Y I++G A + Y+ L
Sbjct 231 TNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELL 290
Query 321 LAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT 380
PL+ L F A R+F L+D I A +E G I V+F Y
Sbjct 291 FGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYN 350
Query 381 --QKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHL 438
+ P+L++ NL IE G+ +A VG +G GKST++ L+ RFY+ G I +D + I+D
Sbjct 351 DNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLT 410
Query 439 GSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTE 498
GSLR + +V QDN+LFS T+ +N+ L +P A+D+++++ + A + + LPQ Y TE
Sbjct 411 GSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTE 470
Query 499 VGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCI 558
VG G LS GQ+Q + + R +L NP ILILDEATSA+D+ +E IQ AL L ++RT +
Sbjct 471 VGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTL 530
Query 559 VIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
++AHRLSTI ADKIVVIENG++VE G+H LI +Q AY LY
Sbjct 531 IVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLY 573
>Q99T13 Putative multidrug export ATP-binding/permease protein
SAV1866 [Staphylococcus aureus (strain Mu50 / ATCC 700699)]
Length=578
Score = 303 bits (775), Expect = 5e-98
Identities = 198/583 (34%), Positives = 311/583 (53%), Gaps = 23/583 (4%)
Query 32 MLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLS 91
M+K+ + V P +Y + A I V I++ + P ++KY +D + A L+
Sbjct 1 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT 60
Query 92 IAISI-LTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRI 150
IAI I L + I R + + +YL+ + K++ +R+ L+ H+Q+L+ ++ + G++
Sbjct 61 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV 120
Query 151 ISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAI 210
ISR DVE + ++ G L++ L C + L + FF + TL LF +
Sbjct 121 ISRVINDVEQTKDFILTG---LMNIWLDCITIIIALSIM---FFLDVKLTLAALF-IFPF 173
Query 211 FKKSSQKHWGRVAE---ERSRFTAH----LVETVNGAKIIQQLNYTQTNQSRYQELLKDF 263
+ + +GR+ + ERS+ A L E V G +++ + K
Sbjct 174 YILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFD---KKN 230
Query 264 NNSIIYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLF 320
N + K T W A ++T+ G I++ G+Y I++G A + Y+ L
Sbjct 231 TNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELL 290
Query 321 LAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT 380
PL+ L F A R+F L+D I A +E G I V+F Y
Sbjct 291 FGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYN 350
Query 381 --QKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHL 438
+ P+L++ NL IE G+ +A VG +G GKST++ L+ RFY+ G I +D + I+D
Sbjct 351 DNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLT 410
Query 439 GSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTE 498
GSLR + +V QDN+LFS T+ +N+ L +P A+D+++++ + A + + LPQ Y TE
Sbjct 411 GSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTE 470
Query 499 VGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCI 558
VG G LS GQ+Q + + R +L NP ILILDEATSA+D+ +E IQ AL L ++RT +
Sbjct 471 VGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTL 530
Query 559 VIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
++AHRLSTI ADKIVVIENG++VE G+H LI +Q AY LY
Sbjct 531 IVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLY 573
>Q9WYC4 Uncharacterized ABC transporter ATP-binding protein TM_0288
[Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM
10099 / NBRC 100826 / MSB8)]
Length=598
Score = 302 bits (774), Expect = 1e-97
Identities = 188/580 (32%), Positives = 321/580 (55%), Gaps = 24/580 (4%)
Query 33 LKKLIPLVYPIRY-LLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLS 91
L++L+ + P + L++ + V + ++ V + P+++ +D F + + L +
Sbjct 25 LRRLLGYLRPHTFTLIMVFVFVTVSSILGV-LSPYLIGKTIDVVF--VPRRFDLLPRYML 81
Query 92 IAISILTLSWICRFALASVSKYLSGRAALK----VINGLRRSLFQHIQSLNIGYFDRTKA 147
I +I +AL S+ +L G+ L V+ LR+ LF+ +Q + +G+FDRT
Sbjct 82 ILGTI--------YALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPH 133
Query 148 GRIISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGM 207
G IISR DV+ + VL + S I+ A ++++ + + +P+ +
Sbjct 134 GDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLI 193
Query 208 TAIFKKSSQKHWGRVAEERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSI 267
T I ++K++ + + E ++G +I+ + ++ + +
Sbjct 194 TQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRK-- 251
Query 268 IYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLFLAPL 324
G+K + L++ + GF +I G + D+I++G A I Y F PL
Sbjct 252 -VGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPL 310
Query 325 QELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQK-P 383
EL++ F A A+RIF +LD + + P+A +L ++ G I F++V F+Y +K P
Sbjct 311 NELSNQFNMIQMALASAERIFEILDLEEE-KDDPDAVELREVRGEIEFKNVWFSYDKKKP 369
Query 384 VLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQ 443
VL++ I+ GQ +A+VGPTG GK+T+V LL RFY+ +G I +D I+ I SLR
Sbjct 370 VLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRS 429
Query 444 HVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALG 503
+ IVLQD +LFS T+ +NL+ P A+D+++ + + +D ++ LP+ Y T + G
Sbjct 430 SIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNG 489
Query 504 KNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHR 563
++LS GQRQL+ + RA+LANPKILILDEATS +D TE+ IQ A+ +L + +T I+IAHR
Sbjct 490 EDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHR 549
Query 564 LSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLYQS 603
L+TI+ AD I+V+ +G +VE G HD LIQ++ Y++L+ S
Sbjct 550 LNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTS 589
>P71082 Putative multidrug export ATP-binding/permease protein
YgaD [Bacillus subtilis (strain 168)]
Length=580
Score = 287 bits (734), Expect = 6e-92
Identities = 178/580 (31%), Positives = 301/580 (52%), Gaps = 16/580 (3%)
Query 31 GMLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVL 90
G++K+ + V P + + + + I++ P ++KY++D Q +
Sbjct 2 GVMKRYMQFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGGGTASDKTTSLF 61
Query 91 SIAISILTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRI 150
+I + L I R + +Y + A KV+ +R LF HIQ L++ ++ T+ G +
Sbjct 62 TIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAKLFDHIQKLSLRFYANTRTGEV 121
Query 151 ISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAI 210
ISR DVE + +I G L I L +++ I L +LF + I
Sbjct 122 ISRVINDVEQTKDFVITG----LMNIWLDMLTILIVISIMLTLDVKLTLISIVLFPLYGI 177
Query 211 FKKSSQKHWGRVAEERSRFTA----HLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNS 266
K ++ ERS+ A HL E + G +I+ Q+++ E F +
Sbjct 178 SVKYFYGRLRKLTRERSQALAQVQGHLHERIQGMPVIRSFAIEDHEQAQFNEKNGHFLDK 237
Query 267 IIYGSKRTSWFAPFTGLLSTLATAGFIVI---GSYAYSDDMISIGQFAESIFYVFLFLAP 323
I + T+W A +++T+ +++ Y + +++G + Y+ P
Sbjct 238 AI---RHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNP 294
Query 324 LQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQ-- 381
++ L + A R+F +D + ++PNA K +Q+ G + FQ+V+F Y +
Sbjct 295 VRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQNVSFQYEKDK 354
Query 382 KPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSL 441
+ +L + +L++ G+ +A+VG +G GKST+V L+ RFY+ G + +D I+D SL
Sbjct 355 ENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSL 414
Query 442 RQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGA 501
R V +VLQD LFS TI +N+ + +PDA+ +++I+ + A E + P+ Y T VG
Sbjct 415 RNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGE 474
Query 502 LGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIA 561
G LS GQ+Q + + R +L NP +LILDEATSA+D+ +E IQ A+ +L ++RT V+A
Sbjct 475 RGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVA 534
Query 562 HRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
HRLSTI ADKIVV+ENG ++E G+HD L+ +S Y L+
Sbjct 535 HRLSTITHADKIVVMENGTIIEIGTHDELMDYESQYKHLF 574
>P54719 Uncharacterized ABC transporter ATP-binding protein YfiC
[Bacillus subtilis (strain 168)]
Length=604
Score = 282 bits (722), Expect = 6e-90
Identities = 179/583 (31%), Positives = 301/583 (52%), Gaps = 17/583 (3%)
Query 30 RGMLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQ-P 88
+G L+++ + + LL+ ++ + ++ + + P+V+ +D I K V P
Sbjct 32 KGTLRRIWSYLAERKGLLILVMLMVVISAIFGLLGPFVIGKAID---HFIVGKTVSGLIP 88
Query 89 VLSIAISILTLS----WICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDR 144
VL + ++I + W + + ++S+ R +R LF H+ L I +FD+
Sbjct 89 VLLLLLAIYIIQSLSLWFQNYWMITISQGTVFR--------MRSELFTHLHELPIPFFDK 140
Query 145 TKAGRIISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPIL 204
+ G ++SR D+E + L ++LS+++ ++ ++ P +P++
Sbjct 141 QRHGELMSRVTNDIENVSSTLNTSVIQILSSVITFVGTIAVMLYMSPLLTLITLTIIPVM 200
Query 205 FGMTAIFKKSSQKHWGRVAEERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFN 264
+ K + + ++ E+V+GAK+I+ + + + + E
Sbjct 201 AASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIKAYSREKQITAEFLEKNAALK 260
Query 265 NSIIYGSKRTSWFAPFTGLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPL 324
S + + + L+ L+ IG ISIG Y F PL
Sbjct 261 TSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL 320
Query 325 QELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQ-KP 383
+L + F + A A+R+F +LD + ++ NA G I F+ V+F Y + +
Sbjct 321 NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQ 380
Query 384 VLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQ 443
L++ + AGQ IA VGPTG GK+TV LL RFYEP G I +D I+ + SLR+
Sbjct 381 TLKHLQFTVPAGQSIAFVGPTGAGKTTVTNLLARFYEPNDGKILIDGTDIKTLTRASLRK 440
Query 444 HVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALG 503
++ VLQD+ LF GTI +N+R + DASDQ++ + A +++LP+ Y T + G
Sbjct 441 NMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTANAHSFIERLPKGYDTVLTQNG 500
Query 504 KNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHR 563
+S GQ+QL+ + RA LA+P +LILDEATS ID TE IQ AL RL + RT ++IAHR
Sbjct 501 SGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHR 560
Query 564 LSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLYQSYLQ 606
L+TI++AD+IVV++NG ++E+GSHD LI+Q+ Y LY+S +
Sbjct 561 LNTIQRADQIVVLKNGEMIEKGSHDELIRQKGFYSDLYESQFE 603
>P45861 Uncharacterized ABC transporter ATP-binding protein YwjA
[Bacillus subtilis (strain 168)]
Length=575
Score = 274 bits (701), Expect = 3e-87
Identities = 163/522 (31%), Positives = 273/522 (52%), Gaps = 2/522 (0%)
Query 90 LSIAISI-LTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAG 148
L IA SI L + AL + Y + + +R+SLF H+Q L+ ++D K G
Sbjct 52 LIIATSIGLFAVYALSSALQYIVTYWGHMLGINIETDMRKSLFDHLQKLSFKFYDNNKTG 111
Query 149 RIISRADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMT 208
++S+ D+ + V GP +L A++ A ++ I F +PI+ +
Sbjct 112 TLMSKLTNDLMYIGEVAHHGPEDLFIAVMTILGAFGVMLFINWQLALLTFIIMPIVIWLA 171
Query 209 AIFKKSSQKHWGRVAEERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSII 268
F K K + + ++ F+A + + G +++Q + R+ + F + +
Sbjct 172 LYFNKKMTKAFTTLNKDIGDFSARVENNIGGIRLVQAFGNEAFEKERFAVNNQRFRVTKL 231
Query 269 YGSKRTSWFAPFTGLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQELT 328
K + + +L+ T ++ G++ +S G+F + + P+ ++
Sbjct 232 SSYKIMAKNGSISYMLTRFVTLFVLLCGTWFVIRGSLSYGEFVAFVLLTNVLFRPIDKIN 291
Query 329 DLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQKP-VLQN 387
+ E Y G A + L++T+ I + P++ + L G+IR++ V+F Y VL +
Sbjct 292 AIIEMYPRGIAGFKSYMELMETEPDIQDSPDSKDVSGLKGNIRYKHVSFGYDDHHNVLND 351
Query 388 FNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSI 447
NL I+AG+ +A VGP+G GKST+ LL RFYE +G I +D I+D+ L SLR + +
Sbjct 352 INLSIQAGETVAFVGPSGAGKSTLCSLLPRFYEASEGDITIDGISIKDMTLSSLRGQIGV 411
Query 448 VLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLS 507
V QD LFSGT+ +N+ + AS++ + Q ++ +E++ +P T +G G LS
Sbjct 412 VQQDVFLFSGTLRENIAYGRLGASEEDIWQAVKQAHLEELVHNMPDGLDTMIGERGVKLS 471
Query 508 HGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTI 567
GQ+Q + + R +L NP ILILDEATSA+D TE IQ AL+ L + RT +VIAHRL+TI
Sbjct 472 GGQKQRLSIARMFLKNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIAHRLATI 531
Query 568 RKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLYQSYLQNQV 609
+ AD+IVV+ N + E+G H LI+ Y +L+Q+ V
Sbjct 532 KDADRIVVVTNNGIEEQGRHQDLIEAGGLYSRLHQAQFGQMV 573
>Q6AJW3 ATP-dependent lipid A-core flippase [Desulfotalea psychrophila
(strain LSv54 / DSM 12343)]
Length=572
Score = 273 bits (698), Expect = 9e-87
Identities = 181/586 (31%), Positives = 303/586 (52%), Gaps = 24/586 (4%)
Query 23 LANTSIHRGMLKKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEK 82
+ N I + + ++IP P+ + A+I V L + ++VK +LD F EK
Sbjct 1 MTNKEIIKRLYHEIIPYKIPLFIAMFAMIVVAAL----TGAQAYLVKDLLDKIFM---EK 53
Query 83 MVLNQPVLS-IAISILTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGY 141
V +L I I+I + + A + + R +I R +F HI ++ +
Sbjct 54 DVFFLQILPLIIIAIFFTKGVLYYTYAIILE----RVGQSIIRDFRLKIFAHIHRQSLSF 109
Query 142 FDRTKAGRIISRADRDV----ETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCL 197
F T G +ISR DV + + V+IQ + I G+ + W + F +
Sbjct 110 FHNTPTGTLISRVLSDVALMQQAVSTVIIQLLRDFFQVIFLLGVIFYMNWKLALICFLII 169
Query 198 -FATLPIL-FGMTAIFKKSSQKHWGRVAEERSRFTAHLVETVNGAKIIQQLNYTQTNQSR 255
A +PI+ FG IF+K S K EE + + L ET++G++I++ R
Sbjct 170 PLAAIPIVKFGK--IFRKLSTK----TQEETAEVSNMLHETISGSRIVKAFCREDYEVER 223
Query 256 YQELLKDFNNSIIYGSKRTSWFAPFTGLLSTLATAGFIVIGSYAYSDDMISIGQFAESIF 315
+ ++ + +K + +P ++ A AG I +G + + G F +
Sbjct 224 FHRQVETLFTITMKNAKYRVFQSPLMEIIGGFAVAGIIWVGGSEVINGSATPGTFFAFLT 283
Query 316 YVFLFLAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSV 375
+ P++ ++ + G A AQR+F +LD + I ++P A L I F V
Sbjct 284 AMITAYDPVKRVSQVNSTIQQGLASAQRVFAILDIKPEIEDKPEATSLAPFKESIEFHDV 343
Query 376 NFAYTQKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQD 435
+F+Y + +L + NL++ AG+ +AIVGP+G GK+T+ L+ RF + Q+G I +D I+D
Sbjct 344 SFSYGTEKILSHINLKVPAGEALAIVGPSGGGKTTLTNLIPRFIDLQEGSITIDGTDIRD 403
Query 436 IHLGSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSY 495
+ SLR +++V Q +LF+ TI +N+ + +++++ + + A +++LP +
Sbjct 404 VTTNSLRNQIAMVTQQTILFNDTIRNNIAYGKDSCTEEEIRRAAKAAHALTFIEELPNGF 463
Query 496 LTEVGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNR 555
T +G G LS GQRQ + + RA LA+ ILILDEATSA+D +E+++Q AL L QNR
Sbjct 464 DTALGEGGAKLSGGQRQRISIARALLADAPILILDEATSALDTESEREVQKALENLMQNR 523
Query 556 TCIVIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
T VIAHRLSTI+ A +IVV++ G +VEEGSH+ L++ + Y LY
Sbjct 524 TTFVIAHRLSTIKNASRIVVVKKGKIVEEGSHEELLKLEGEYQLLY 569
>O31707 Uncharacterized ABC transporter ATP-binding protein YknU
[Bacillus subtilis (strain 168)]
Length=585
Score = 271 bits (694), Expect = 5e-86
Identities = 163/570 (29%), Positives = 284/570 (50%), Gaps = 8/570 (1%)
Query 34 KKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLSIA 93
K+L +P R + + + +L V P +++ +D + + L V
Sbjct 5 KRLKMYYWPYRKVFMWSLLAMLLMTAITVVYPIILQITIDEIV--LGRQYQLAAWVSLGF 62
Query 94 ISILTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISR 153
I+++ L + F +YL +K + LR L++ +Q L+ Y+D K G ++SR
Sbjct 63 IAVMVLKGMATF----FHQYLGDMFGIKSVYRLRNGLYEKLQRLSFSYYDNAKTGDLMSR 118
Query 154 ADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAIFKK 213
DVE L L G EL+ L ++ ++++ P A LP L F K
Sbjct 119 LTADVEGLRFFLSYGLAELIRFGLLVAISLSVMFYYSVPLTLVTIAVLPFLAVAVYRFDK 178
Query 214 SSQKHWGRVAEERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKR 273
+ + + ++ + E ++G ++ L+ S + + ++ + S
Sbjct 179 RVHPAFRGIRKSFAKLNTKVQENISGINTVKSLSREDFQISTFNKANAEYRAQYLQTSSI 238
Query 274 TSWFAPFTGLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFER 333
S + P + + G Y + ++ G+ V + P+ L +
Sbjct 239 WSAYFPLMEFIGNTCIVALLSYGGYLVMQNQLNPGELVAFFSLVNYMMWPIMNLGFVINM 298
Query 334 YANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAY--TQKPVLQNFNLE 391
++ A +R+ +L+ + I + P+A ++L G + F++V+ AY Q L N + E
Sbjct 299 FSQAKASGERLLDILEKEEDITDHPHALHKQKLTGDVHFKNVSLAYGKEQTNALCNVSFE 358
Query 392 IEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQD 451
+G++I ++GPTG GKS+V QLLTRFY P G I +D PI D L +LR ++ +VLQ+
Sbjct 359 ANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITIDHKPITDYSLKTLRSNIGVVLQE 418
Query 452 NVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQR 511
+ LFS TI N+ +PDAS + +I+ + A + +LP Y T +G G LS GQ+
Sbjct 419 SFLFSSTIRSNISYGRPDASMEDVIEAAKRAQAHNFIMELPDGYDTMLGERGMGLSGGQK 478
Query 512 QLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKAD 571
Q + + RA NP ILILD+ATSA+D+ TE IQ AL+ + +NRT ++AHR+S+++ AD
Sbjct 479 QRIAIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHAD 538
Query 572 KIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
+I+V G + E G+H L+++ Y ++Y
Sbjct 539 EILVFNKGRIRERGTHHELLEKGGYYKKIY 568
>P9WQJ2 Fatty acid ABC transporter ATP-binding/permease protein
[Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)]
Length=631
Score = 272 bits (695), Expect = 1e-85
Identities = 161/486 (33%), Positives = 252/486 (52%), Gaps = 13/486 (3%)
Query 121 KVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEPVLIQGPPELLSAILRCG 180
K + LR + + L + YFD + G ++SR D++ L+ L +L+++IL
Sbjct 150 KTMVRLRTDVEDKVHRLPLSYFDGQQRGELLSRVTNDIDNLQSSLSMTISQLVTSILTMV 209
Query 181 LASVLLWHIYPPFFWCLFATLPILFGMTAIFKKSSQK----HWGRVAEERSRFTAHLVET 236
++ I T+P+ +T + SQ HW R AHL ET
Sbjct 210 AVLAMMVSISGLLALITLLTVPLSLLVTRAITRRSQPLFVAHW----TSTGRLNAHLEET 265
Query 237 VNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFTGLLSTLATAGFIVIG 296
+G +++ + + R+ EL D + + P T + L V G
Sbjct 266 YSGFTVVKTFGHQAAARERFHELNDDVYQAGFGAQFLSGLVQPATAFIGNLGYVAVAVAG 325
Query 297 SYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACAQRIFLLLDTQSTILE 356
+ I++G I Y+ F PL +L ++ +G A A+R+F +LD E
Sbjct 326 GLQVATGQITLGSIQAFIQYIRQFNMPLSQLAGMYNALQSGVASAERVFDVLDEPE---E 382
Query 357 QPNAA-KLEQLNGHIRFQSVNFAYTQ-KPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQL 414
P +L L G + F+ VNFAY PV+++ +L E G +AIVGPTG GK+T+V L
Sbjct 383 SPEPEPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTTLVNL 442
Query 415 LTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQK 474
L RFYE G I +D I + SLR + +VLQD L+ GTI +N+ +P+A+ +
Sbjct 443 LMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDE 502
Query 475 LIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAYLANPKILILDEATS 534
+++ D + LP Y T V G ++S G++QL+ + RA+LA P++LILDEATS
Sbjct 503 IVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATS 562
Query 535 AIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQ 594
++D TE IQ A+R L ++RT +IAHRLSTIR AD I+V++ G +VE G+H L+ ++
Sbjct 563 SVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARR 622
Query 595 SAYFQL 600
Y+Q+
Sbjct 623 GVYYQM 628
>P63398 Fatty acid ABC transporter ATP-binding/permease protein
[Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)]
Length=631
Score = 272 bits (695), Expect = 1e-85
Identities = 161/486 (33%), Positives = 252/486 (52%), Gaps = 13/486 (3%)
Query 121 KVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEPVLIQGPPELLSAILRCG 180
K + LR + + L + YFD + G ++SR D++ L+ L +L+++IL
Sbjct 150 KTMVRLRTDVEDKVHRLPLSYFDGQQRGELLSRVTNDIDNLQSSLSMTISQLVTSILTMV 209
Query 181 LASVLLWHIYPPFFWCLFATLPILFGMTAIFKKSSQK----HWGRVAEERSRFTAHLVET 236
++ I T+P+ +T + SQ HW R AHL ET
Sbjct 210 AVLAMMVSISGLLALITLLTVPLSLLVTRAITRRSQPLFVAHW----TSTGRLNAHLEET 265
Query 237 VNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFTGLLSTLATAGFIVIG 296
+G +++ + + R+ EL D + + P T + L V G
Sbjct 266 YSGFTVVKTFGHQAAARERFHELNDDVYQAGFGAQFLSGLVQPATAFIGNLGYVAVAVAG 325
Query 297 SYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACAQRIFLLLDTQSTILE 356
+ I++G I Y+ F PL +L ++ +G A A+R+F +LD E
Sbjct 326 GLQVATGQITLGSIQAFIQYIRQFNMPLSQLAGMYNALQSGVASAERVFDVLDEPE---E 382
Query 357 QPNAA-KLEQLNGHIRFQSVNFAYTQ-KPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQL 414
P +L L G + F+ VNFAY PV+++ +L E G +AIVGPTG GK+T+V L
Sbjct 383 SPEPEPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTTLVNL 442
Query 415 LTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQK 474
L RFYE G I +D I + SLR + +VLQD L+ GTI +N+ +P+A+ +
Sbjct 443 LMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDE 502
Query 475 LIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAYLANPKILILDEATS 534
+++ D + LP Y T V G ++S G++QL+ + RA+LA P++LILDEATS
Sbjct 503 IVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATS 562
Query 535 AIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQ 594
++D TE IQ A+R L ++RT +IAHRLSTIR AD I+V++ G +VE G+H L+ ++
Sbjct 563 SVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARR 622
Query 595 SAYFQL 600
Y+Q+
Sbjct 623 GVYYQM 628
>P9WQJ3 Fatty acid ABC transporter ATP-binding/permease protein
[Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)]
Length=631
Score = 272 bits (695), Expect = 1e-85
Identities = 161/486 (33%), Positives = 252/486 (52%), Gaps = 13/486 (3%)
Query 121 KVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEPVLIQGPPELLSAILRCG 180
K + LR + + L + YFD + G ++SR D++ L+ L +L+++IL
Sbjct 150 KTMVRLRTDVEDKVHRLPLSYFDGQQRGELLSRVTNDIDNLQSSLSMTISQLVTSILTMV 209
Query 181 LASVLLWHIYPPFFWCLFATLPILFGMTAIFKKSSQK----HWGRVAEERSRFTAHLVET 236
++ I T+P+ +T + SQ HW R AHL ET
Sbjct 210 AVLAMMVSISGLLALITLLTVPLSLLVTRAITRRSQPLFVAHW----TSTGRLNAHLEET 265
Query 237 VNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFTGLLSTLATAGFIVIG 296
+G +++ + + R+ EL D + + P T + L V G
Sbjct 266 YSGFTVVKTFGHQAAARERFHELNDDVYQAGFGAQFLSGLVQPATAFIGNLGYVAVAVAG 325
Query 297 SYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACAQRIFLLLDTQSTILE 356
+ I++G I Y+ F PL +L ++ +G A A+R+F +LD E
Sbjct 326 GLQVATGQITLGSIQAFIQYIRQFNMPLSQLAGMYNALQSGVASAERVFDVLDEPE---E 382
Query 357 QPNAA-KLEQLNGHIRFQSVNFAYTQ-KPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQL 414
P +L L G + F+ VNFAY PV+++ +L E G +AIVGPTG GK+T+V L
Sbjct 383 SPEPEPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTTLVNL 442
Query 415 LTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTILDNLRLVQPDASDQK 474
L RFYE G I +D I + SLR + +VLQD L+ GTI +N+ +P+A+ +
Sbjct 443 LMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDE 502
Query 475 LIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAYLANPKILILDEATS 534
+++ D + LP Y T V G ++S G++QL+ + RA+LA P++LILDEATS
Sbjct 503 IVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATS 562
Query 535 AIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQ 594
++D TE IQ A+R L ++RT +IAHRLSTIR AD I+V++ G +VE G+H L+ ++
Sbjct 563 SVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARR 622
Query 595 SAYFQL 600
Y+Q+
Sbjct 623 GVYYQM 628
>P35598 Putative ABC transporter ATP-binding protein exp8 [Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)]
Length=583
Score = 270 bits (691), Expect = 1e-85
Identities = 183/580 (32%), Positives = 301/580 (52%), Gaps = 27/580 (5%)
Query 32 MLKKLIPLVYPIRYLLLALIAVEILQVMSVF--VRPWVVKYILDSGFQHIAEKMVLNQPV 89
+LK+L+ + P Y LL +A+ L +V V P V + +D Q+++ L V
Sbjct 10 VLKRLMSYLKP--YGLLTFLALSFLLATTVIKSVIPLVASHFID---QYLSNLNQLAVTV 64
Query 90 LSIAISILTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGR 149
L + + L + ++ V L R + ++ +RR F +++ L + YFD+T AG
Sbjct 65 LLVYYGLYILQTVVQY----VGNLLFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGS 120
Query 150 IISRADRDVETLEPVLIQGPPELLSA--ILRCGLASVLLWHIYPPFFWCLFATLPILFGM 207
I+SR D ET+ + +SA I L ++L+ LF LP++F +
Sbjct 121 IVSRLTNDTETISDMFSGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLF--LPLIFLL 178
Query 208 TAIFKKSSQKHWGRVAEERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSI 267
+++K S K + S + L E + G +IIQ N + Q+ + E+ ++ +
Sbjct 179 VNLYRKKSVKIIEKTRSLLSDINSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEH---L 235
Query 268 IYGSKRTS----WFAPFTGLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAP 323
+Y ++ + + P LL L A + Y I++G I Y+ P
Sbjct 236 VYANRSVALDALFLRPAMSLLKLLGYAVLMAYFGYRGFSIGITVGTMYAFIQYINRLFDP 295
Query 324 LQELTDLFERYANGAACAQRIFLLLDTQS-TILEQPNAAKLEQLNGHIRFQSVNFAYTQK 382
L E+T F A R+F L+D ++ L++ AK+++ G+IRF+ V F+Y K
Sbjct 296 LIEVTQNFSTLQTAMVSAGRVFALIDERTYEPLQENGQAKVQE--GNIRFEHVCFSYDGK 353
Query 383 -PVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSL 441
P+L + + + G+ IA VG TG GKS+++ +L RFYE Q G + LD I+D L
Sbjct 354 HPILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEEL 413
Query 442 RQHVSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGA 501
R+++ +VLQ+ L+ GTI N+ + Q + SD+++ + AD +Q+LPQ Y + V
Sbjct 414 RKNIGLVLQEPFLYHGTIKSNIAMYQ-ETSDEQVQAAAAFVDADSFIQELPQGYDSPVSE 472
Query 502 LGKNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIA 561
G + S GQRQL+ R + PKILILDEAT+ ID TE +Q +L ++ Q RT I IA
Sbjct 473 RGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIA 532
Query 562 HRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
HRLSTI+ A+ I V++ G ++E G+H+ L+ Y ++Y
Sbjct 533 HRLSTIQDANCIYVLDKGRIIESGTHEELLALGGTYHKMY 572
>P44407 ATP-dependent lipid A-core flippase [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=587
Score = 258 bits (660), Expect = 4e-81
Identities = 172/576 (30%), Positives = 298/576 (52%), Gaps = 20/576 (3%)
Query 34 KKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLSIA 93
K+L P++ P + L+ + ++ +++K +LD GF + + + +
Sbjct 18 KRLWPMIKPFKAGLIVSGVALVFNALADSGLIYLLKPLLDDGFGKANHSFL--KMMAFVV 75
Query 94 ISILTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISR 153
+ ++ L I F +S Y + KV+ +RR LF+H+ + + +FD+ GR++SR
Sbjct 76 VGMIILRGITNF----ISNYCLAWVSGKVVMTMRRRLFKHLMFMPVSFFDQNSTGRLLSR 131
Query 154 ADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAIFKK 213
D + ++ L I+R G + L+ + W L L I+ + A+ +
Sbjct 132 ITYDSQ----MIASSSSGSLITIVREGAYIISLFAVMFYTSWELTIVLFIIGPIIAVLIR 187
Query 214 SSQKHWGRVA----EERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIY 269
K + R++ + T+ + + G K++ + + + D +
Sbjct 188 LVSKIFRRLSKNLQDSMGELTSATEQMLKGHKVVLSFGGQHVEEVHFNHVSNDMRRKSMK 247
Query 270 GSKRTSWFAPFTGLLSTLATAGFIVIGSYAY-SDDMISIGQFAESIFYVFLFLAPLQELT 328
S P ++++LA A + + + ++D +S G F + + PL+ LT
Sbjct 248 MVTANSISDPVVQVIASLALATVLYLATTPLIAEDNLSAGSFTVVFSSMLAMMRPLKSLT 307
Query 329 DLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQKP--VLQ 386
+ ++ +G A Q +F +LD + + A K E G + F++V+FAY K L
Sbjct 308 AVNAQFQSGMAACQTLFAILDLEPE--KDDGAYKAEPAKGELEFKNVSFAYQGKDELALN 365
Query 387 NFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVS 446
N + + AG+ +A+VG +G GKST+ L+TRFY+ +QG I LD IQD L +LR++ +
Sbjct 366 NISFSVPAGKTVALVGRSGSGKSTIANLVTRFYDIEQGEILLDGVNIQDYRLSNLRENCA 425
Query 447 IVLQDNVLFSGTILDNLRLVQPDA-SDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKN 505
+V Q LF+ TI +N+ D S +++I + A E +++LPQ + T +G G +
Sbjct 426 VVSQQVHLFNDTIANNIAYAAQDKYSREEIIAAAKAAYALEFIEKLPQVFDTVIGENGTS 485
Query 506 LSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLS 565
LS GQRQ + + RA L N +LILDEATSA+D +E+ IQ AL L ++RT +VIAHRLS
Sbjct 486 LSGGQRQRLAIARALLRNSPVLILDEATSALDTESERAIQSALEELKKDRTVVVIAHRLS 545
Query 566 TIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLY 601
TI AD+I+VI++G + E G+H L++Q AY QL+
Sbjct 546 TIENADEILVIDHGEIRERGNHKTLLEQNGAYKQLH 581
>O07549 Probable multidrug resistance ABC transporter ATP-binding/permease
protein YheH [Bacillus subtilis (strain 168)]
Length=673
Score = 254 bits (648), Expect = 2e-78
Identities = 159/499 (32%), Positives = 267/499 (54%), Gaps = 16/499 (3%)
Query 113 YLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEPVLIQGPPEL 172
YL +A ++I +R+ +F HIQ + I YFD AG++++R D E + + +
Sbjct 172 YLLQMSANRIIQKMRQDVFSHIQKMPIRYFDNLPAGKVVARITNDTEAIRDLYVTVLSTF 231
Query 173 L-SAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAIFKKSSQKHWGRVAEERSRFTA 231
+ S I G+ + L F CL A +PI++ + I+++ + + ++ S A
Sbjct 232 VTSGIYMFGIFTALFLLDVKLAFVCL-AIVPIIWLWSVIYRRYASYYNQKIRSINSDINA 290
Query 232 HLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFTG--LLSTLAT 289
+ E++ G IIQ + + ++EL N S Y R L++ +
Sbjct 291 KMNESIQGMTIIQAFRHQKETMREFEEL----NESHFYFQNRMLNLNSLMSHNLVNVIRN 346
Query 290 AGFIVI-----GSYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACAQRI 344
F+ + G+ + ++SIG + Y+ P+ + + F + A R+
Sbjct 347 LAFVCLIWHFGGASLNAAGIVSIGVLYAFVDYLNRLFQPITGIVNQFSKLELARVSAGRV 406
Query 345 FLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQ-KPVLQNFNLEIEAGQIIAIVGP 403
F LL+ ++T E+ E+ G + F+ V+FAY + + VL++ + + G+ +A+VG
Sbjct 407 FELLEEKNT--EEAGEPAKERALGRVEFRDVSFAYQEGEEVLKHISFTAQKGETVALVGH 464
Query 404 TGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTILDNL 463
TG GKS+++ LL RFY+ Q+G + +D I ++ LR H+ IVLQD LFSGTI N+
Sbjct 465 TGSGKSSILNLLFRFYDAQKGDVLIDGKSIYNMSRQELRSHMGIVLQDPYLFSGTIGSNV 524
Query 464 RLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAYLAN 523
L +++++ + +GA+ +L++LP+ V G LS G+RQL+ RA +
Sbjct 525 SLDDERMTEEEIKNALRQVGAEPLLKKLPKGINEPVIEKGSTLSSGERQLISFARALAFD 584
Query 524 PKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGYVVE 583
P ILILDEAT+ ID TE IQ AL + Q RT VIAHRLSTIR AD+I+V++ G +VE
Sbjct 585 PAILILDEATAHIDTETEAVIQKALDVVKQGRTTFVIAHRLSTIRNADQILVLDKGEIVE 644
Query 584 EGSHDHLIQQQSAYFQLYQ 602
G+H+ L+ + Y+Q+Y+
Sbjct 645 RGNHEELMALEGQYYQMYE 663
>P60752 ATP-dependent lipid A-core flippase [Escherichia coli
(strain K12)]
Length=582
Score = 251 bits (640), Expect = 3e-78
Identities = 170/579 (29%), Positives = 298/579 (51%), Gaps = 25/579 (4%)
Query 34 KKLIPLVYPIRYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLSIA 93
++L P + P + L+ IL S ++K +LD GF +++ P++ I
Sbjct 14 RRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTDRSVLVWMPLVVIG 73
Query 94 ISILTLSWICRFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISR 153
+ IL R + VS Y + KV+ +RR LF H+ + + +FD+ G ++SR
Sbjct 74 LMIL------RGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSR 127
Query 154 ADRDVETLEPVLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAIFKK 213
D E + L ++R G + + L+ + + W L L +L + +I +
Sbjct 128 ITYDSEQVA----SSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSIAIR 183
Query 214 SSQKHWGRVAEERS----RFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIY 269
K + +++ + T + + G K + + R+ ++ N +
Sbjct 184 VVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVS---NRMRLQ 240
Query 270 GSKRTSWFA---PFTGLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQE 326
G K S + P L+++LA A + S+ D ++ G + + PL+
Sbjct 241 GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKS 300
Query 327 LTDLFERYANGAACAQRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQK--PV 384
LT++ ++ G A Q +F +LD++ + +E+ G + F++V F Y + P
Sbjct 301 LTNVNAQFQRGMAACQTLFTILDSEQE--KDEGKRVIERATGDVEFRNVTFTYPGRDVPA 358
Query 385 LQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQH 444
L+N NL+I AG+ +A+VG +G GKST+ L+TRFY+ +G I +D + +++ L SLR
Sbjct 359 LRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQ 418
Query 445 VSIVLQDNVLFSGTILDNLRLVQPDASDQKLIQVIEDLG-ADEILQQLPQSYLTEVGALG 503
V++V Q+ LF+ T+ +N+ + + ++ I+ + A + + ++ T +G G
Sbjct 419 VALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENG 478
Query 504 KNLSHGQRQLVCLVRAYLANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHR 563
LS GQRQ + + RA L + ILILDEATSA+D +E+ IQ AL L +NRT +VIAHR
Sbjct 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHR 538
Query 564 LSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAYFQLYQ 602
LSTI KAD+IVV+E+G +VE G+H+ L++ + Y QL++
Sbjct 539 LSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHK 577
>O53645 Multidrug efflux ATP-binding/permease protein Rv0194 [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=1194
Score = 259 bits (663), Expect = 8e-78
Identities = 170/562 (30%), Positives = 283/562 (50%), Gaps = 13/562 (2%)
Query 46 LLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLSIAISILTLSWICRF 105
L L+L+ V + Q + + P ++++ +D G + + + A ++ W+ ++
Sbjct 627 LALSLLLVAV-QTCAGLLPPLLIRHGIDVGIRRHVLSALWWAALAGTATVVIR--WVVQW 683
Query 106 ALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEPVL 165
A V+ Y + + LR +F H Q L + F+ +I++ DVE + L
Sbjct 684 GSAMVAGYTGEQVLFR----LRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFL 739
Query 166 IQG-PPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAIFKKSSQKHWGRVAE 224
G ++S + G+ LL I +F T+P+L T F+++S + R
Sbjct 740 RTGLVVAVISVVTLVGILVALL-AIRARLVLLIFTTMPVLALATWQFRRASNWTYRRARH 798
Query 225 ERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFTGLL 284
TA L E G +I Q Y D+ + G + + + PF LL
Sbjct 799 RLGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSDDYRRLGVRGQRLLALYYPFVALL 858
Query 285 STLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACAQRI 344
+LAT ++ G+ +IS+G + Y+ L P+ EL +F+ Y A A RI
Sbjct 859 CSLATTLVLLDGAREVRAGVISVGALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGRI 918
Query 345 FLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQK--PVLQNFNLEIEAGQIIAIVG 402
LL T++ P A + L G + F +V+++Y + P L NL I AGQ + VG
Sbjct 919 RSLLSTRTP--SSPAARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFVG 976
Query 403 PTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTILDN 462
TG GKST+++L+ RFY+P G + +D +++ + R + IV Q+ +F+GT+ D
Sbjct 977 STGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRDA 1036
Query 463 LRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAYLA 522
+ +PDA+D ++ + ++GA ++ L YL +V A G+NLS GQ QL+ L RA L
Sbjct 1037 IAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARLV 1096
Query 523 NPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGYVV 582
+P IL+LDEAT A+D TE +Q A L RT +++AH L+ AD+IVV+E+G VV
Sbjct 1097 DPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTVV 1156
Query 583 EEGSHDHLIQQQSAYFQLYQSY 604
E+G+H L+ Y +L+ ++
Sbjct 1157 EDGAHTELLAAGGHYSRLWAAH 1178
Score = 202 bits (513), Expect = 5e-58
Identities = 152/560 (27%), Positives = 263/560 (47%), Gaps = 15/560 (3%)
Query 44 RYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLSIAISILTLSWIC 103
R LLL A V++V V P V K ++D ++P+ A+ +L +
Sbjct 18 RDLLLGFGAALAGTVIAVLV-PLVTKRVIDDAIA------ADHRPLAPWAV-VLVAAAGA 69
Query 104 RFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEP 163
+ L V +Y GR A V + LR FQ + + DR +G++I R D++ ++
Sbjct 70 TYLLMYVRRYYGGRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRTTNDLQLVQA 129
Query 164 VLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPI-LFGMTAIFKKSSQKHWGRV 222
+L P L + +V+ W P L A L + + G+ A +
Sbjct 130 LLFDVPNVLRHVLTLLLGVAVMTWLSVP---LALLAVLLVPVIGLIAHRSRRLLAAATHC 186
Query 223 AEERSRFTAHLVET-VNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFT 281
A+E +V+ V G ++++ + + + + + ++ + F P
Sbjct 187 AQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVTASRALYAAQLRVARLNAHFGPLL 246
Query 282 GLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACA 341
L L +G + + I++G F + L P +L + A A
Sbjct 247 QTLPALGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQQARAGA 306
Query 342 QRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT-QKPVLQNFNLEIEAGQIIAI 400
R+ L+D++ T+++ E + FQ V+F Y +PVL+ +L + AG+ +A+
Sbjct 307 VRVLELIDSRPTLVDGTKPLSPEARLS-LEFQRVSFGYVADRPVLREISLSVRAGETLAV 365
Query 401 VGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTIL 460
VG G GKST+ L TR Y+ QG + + ++++ L SLR + +V +D VLFSGTI
Sbjct 366 VGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGTIG 425
Query 461 DNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAY 520
N+ +PDA+ +++ +E + LP Y T VGA G LS GQRQ + L RA
Sbjct 426 ANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALARAL 485
Query 521 LANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGY 580
L P++LI+D+ TSA+D E IQ LR +RT ++ R S + AD++ V+++G
Sbjct 486 LHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDSGR 545
Query 581 VVEEGSHDHLIQQQSAYFQL 600
+++ G+ D + ++ Y +L
Sbjct 546 LLDVGTPDEVWERCPRYREL 565
>A1KF14 Multidrug efflux ATP-binding/permease protein BCG_0231
[Mycobacterium bovis (strain BCG / Pasteur 1173P2)]
Length=1194
Score = 259 bits (663), Expect = 8e-78
Identities = 170/562 (30%), Positives = 283/562 (50%), Gaps = 13/562 (2%)
Query 46 LLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLSIAISILTLSWICRF 105
L L+L+ V + Q + + P ++++ +D G + + + A ++ W+ ++
Sbjct 627 LALSLLLVAV-QTCAGLLPPLLIRHGIDVGIRRHVLSALWWAALAGTATVVIR--WVVQW 683
Query 106 ALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEPVL 165
A V+ Y + + LR +F H Q L + F+ +I++ DVE + L
Sbjct 684 GSAMVAGYTGEQVLFR----LRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFL 739
Query 166 IQG-PPELLSAILRCGLASVLLWHIYPPFFWCLFATLPILFGMTAIFKKSSQKHWGRVAE 224
G ++S + G+ LL I +F T+P+L T F+++S + R
Sbjct 740 RTGLVVAVISVVTLVGILVALL-AIRARLVLLIFTTMPVLALATWQFRRASNWTYRRARH 798
Query 225 ERSRFTAHLVETVNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFTGLL 284
TA L E G +I Q Y D+ + G + + + PF LL
Sbjct 799 RLGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSDDYRRLGVRGQRLLALYYPFVALL 858
Query 285 STLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACAQRI 344
+LAT ++ G+ +IS+G + Y+ L P+ EL +F+ Y A A RI
Sbjct 859 CSLATTLVLLDGAREVRAGVISVGALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGRI 918
Query 345 FLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYTQK--PVLQNFNLEIEAGQIIAIVG 402
LL T++ P A + L G + F +V+++Y + P L NL I AGQ + VG
Sbjct 919 RSLLSTRTP--SSPAARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFVG 976
Query 403 PTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTILDN 462
TG GKST+++L+ RFY+P G + +D +++ + R + IV Q+ +F+GT+ D
Sbjct 977 STGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRDA 1036
Query 463 LRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAYLA 522
+ +PDA+D ++ + ++GA ++ L YL +V A G+NLS GQ QL+ L RA L
Sbjct 1037 IAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARLV 1096
Query 523 NPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGYVV 582
+P IL+LDEAT A+D TE +Q A L RT +++AH L+ AD+IVV+E+G VV
Sbjct 1097 DPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTVV 1156
Query 583 EEGSHDHLIQQQSAYFQLYQSY 604
E+G+H L+ Y +L+ ++
Sbjct 1157 EDGAHTELLAAGGHYSRLWAAH 1178
Score = 204 bits (520), Expect = 7e-59
Identities = 153/560 (27%), Positives = 264/560 (47%), Gaps = 15/560 (3%)
Query 44 RYLLLALIAVEILQVMSVFVRPWVVKYILDSGFQHIAEKMVLNQPVLSIAISILTLSWIC 103
R LLL A V++V V P V K ++D ++P+ A+ +L +
Sbjct 18 RDLLLGFGAALAGTVIAVLV-PLVTKRVIDDAIA------ADHRPLAPWAV-VLVAAAGA 69
Query 104 RFALASVSKYLSGRAALKVINGLRRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEP 163
+ L V +Y GR A V + LR FQ + + DR +G++I R D++ ++
Sbjct 70 TYLLTYVRRYYGGRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRTTNDLQLVQA 129
Query 164 VLIQGPPELLSAILRCGLASVLLWHIYPPFFWCLFATLPI-LFGMTAIFKKSSQKHWGRV 222
+L P L + +V+ W P L A L + + G+ A +
Sbjct 130 LLFDVPNVLRHVLTLLLGVAVMTWLSVP---LALLAVLLVPVIGLIAHRSRRLLAAATHC 186
Query 223 AEERSRFTAHLVET-VNGAKIIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFT 281
A+E +V+ V G ++++ + + + + + ++ + F P
Sbjct 187 AQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVMASRALYAAQLRVARLNAHFGPLL 246
Query 282 GLLSTLATAGFIVIGSYAYSDDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACA 341
L L +G + + I++G F + L P +L + A A
Sbjct 247 QTLPALGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQQARAGA 306
Query 342 QRIFLLLDTQSTILEQPNAAKLEQLNGHIRFQSVNFAYT-QKPVLQNFNLEIEAGQIIAI 400
R+ L+D++ T+++ LE + FQ V+F Y +PVL+ +L + AG+ +A+
Sbjct 307 VRVLELIDSRPTLVDGTKPLSLEARLS-LEFQRVSFGYVADRPVLREISLSVRAGETLAV 365
Query 401 VGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTIL 460
VG G GKST+ L TR Y+ QG + + ++++ L SLR + +V +D VLFSGTI
Sbjct 366 VGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGTIG 425
Query 461 DNLRLVQPDASDQKLIQVIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAY 520
N+ +PDA+ +++ +E + LP Y T VGA G LS GQRQ + L RA
Sbjct 426 ANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALARAL 485
Query 521 LANPKILILDEATSAIDIYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGY 580
L P++LI+D+ TSA+D E IQ LR +RT ++ R S + AD++ V+++G
Sbjct 486 LHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDSGR 545
Query 581 VVEEGSHDHLIQQQSAYFQL 600
+++ G+ D + ++ Y +L
Sbjct 546 LLDVGTPDEVWERCPRYREL 565
>Q9KQW9 ATP-dependent lipid A-core flippase [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=582
Score = 235 bits (600), Expect = 2e-72
Identities = 155/545 (28%), Positives = 276/545 (51%), Gaps = 23/545 (4%)
Query 67 VVKYILDSGFQHIAEKMVLNQPVLSIAISILTLSWICRFALASVSKYLSGRAALKVINGL 126
++K +LD GF + + P + + ++ + + FA + ++SG ++ +
Sbjct 47 LLKPLLDEGFGNAESNFLRILPFM--ILGLMFVRGLSGFASSYCLSWVSGNVVMQ----M 100
Query 127 RRSLFQHIQSLNIGYFDRTKAGRIISRADRDVETLEPVLIQGPPELLSAILR-----CGL 181
RR LF H + + +FD+ G ++SR D E + + L +I+R GL
Sbjct 101 RRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRA----LVSIVREGASIIGL 156
Query 182 ASVLLWHIYPPFFWCLFATLPILFGMTAIFKKSSQKHWGRVAEERSRFTAHLVETVNGAK 241
+++ W+ + L P++ + K +K + T+ + + G K
Sbjct 157 LTLMFWNSWQ-LSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHK 215
Query 242 IIQQLNYTQTNQSRYQELLKDFNNSIIYGSKRTSWFAPFTGLLSTLATAGFIVIGSYAYS 301
++ + + R+ ++ + S P ++++LA + + S
Sbjct 216 VVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSI 275
Query 302 DDMISIGQFAESIFYVFLFLAPLQELTDLFERYANGAACAQRIFLLLDTQSTILEQPNAA 361
++ G F +F + PL+ LT + + G A Q +F L+D ++ E+ N
Sbjct 276 RAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET---ERDNGK 332
Query 362 -KLEQLNGHIRFQSVNFAYT--QKPVLQNFNLEIEAGQIIAIVGPTGHGKSTVVQLLTRF 418
+ E++NG + + V F Y +KP L + + I G+ +A+VG +G GKST+ L TRF
Sbjct 333 YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRF 392
Query 419 YEPQQGGIFLDRYPIQDIHLGSLRQHVSIVLQDNVLFSGTILDNLRLV-QPDASDQKLIQ 477
Y+ G I LD + ++D L +LR+H ++V Q+ LF+ TI +N+ + + + +++ Q
Sbjct 393 YDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQ 452
Query 478 VIEDLGADEILQQLPQSYLTEVGALGKNLSHGQRQLVCLVRAYLANPKILILDEATSAID 537
A E ++ +PQ T +G G +LS GQRQ V + RA L + +LILDEATSA+D
Sbjct 453 AARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALD 512
Query 538 IYTEQKIQYALRRLCQNRTCIVIAHRLSTIRKADKIVVIENGYVVEEGSHDHLIQQQSAY 597
+E+ IQ AL L +N+T +VIAHRLSTI +AD+I+V++ G ++E G H L+ Q AY
Sbjct 513 TESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAY 572
Query 598 FQLYQ 602
QL++
Sbjct 573 AQLHR 577
Lambda K H a alpha
0.325 0.139 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 7461384
Database: 3c764ecb270b4d9935cb9df90a335e80.SwissProt.fasta
Posted date: May 9, 2024 1:16 AM
Number of letters in database: 14,874
Number of sequences in database: 23
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
