BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 2630f808a79a9502cde5bf209d1417ae.SwissProt.fasta
2 sequences; 1,404 total letters
Query= ACIAD1533
Length=871
Score E
Sequences producing significant alignments: (Bits) Value
P0CL48 Ferrioxamine B receptor [Salmonella typhimurium (strain LT... 64.7 2e-14
E1W8M5 Ferrioxamine B receptor [Salmonella typhimurium (strain SL... 64.3 2e-14
>P0CL48 Ferrioxamine B receptor [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=702
Score = 64.7 bits (156), Expect = 2e-14
Identities = 88/390 (23%), Positives = 149/390 (38%), Gaps = 78/390 (20%)
Query 10 LVIALSVLGATLPLYVFAEETSHQAGDSESDVITLSDVVVTGATNKTTVVPKRKVTSIYG 69
L+I ++ GAT PL FA+ET+ ++D + ++ V +GAT T
Sbjct 15 LLIGGAIGGATFPL--FAQETT------KNDTVIVTSPVQSGATKLAT------------ 54
Query 70 TDSSVLDTPRVVSQVSEQQFREDVIRSADDLVKYAPSI--TRGGGQNANFAPQIRGQN-- 125
++TP+ VS ++ QQF E S V Y P + + G N +RG +
Sbjct 55 ---PDIETPQSVSIITRQQFEEQGATSVRQAVSYTPGVYSNQIGASNRFDYIVLRGFSDG 111
Query 126 --SEVFQDSQRIY-STRHPTNLNA----YEGADIVAGPTGVIFAPTSGSGGYINYLTKKP 178
V+ D ++ T ++L E ++V GP V++ S GG + ++KP
Sbjct 112 SLDNVYLDGLKMMGDTNSHSSLVVDPWFLEDIEVVRGPASVLYG-RSSPGGIVALTSRKP 170
Query 179 NFNKAETNISGTVGSIYSGKGAEPNFSVSIDHTAPISKELAFRVSATAQKTDDYYDNVKN 238
F+ +G +++G + + + ++ +A R+S + D + +K
Sbjct 171 AFD------AGGEVKLFAGNNNQRGAAFDVTGPLDDNERVAARLSGMTRYADSQFTPLKE 224
Query 239 NFNAFYGALAWRPNDRLRVDWNISYDDYYDFNVTHGWNRASQQSVDNGLYYKGRATPIIQ 298
A +L WR DR R+D ++Y +R + +GL Y+G P
Sbjct 225 ERYALMPSLTWRITDRTRLDL-MAYP-----------HRDPEGGSHSGLPYQGTVVP--Y 270
Query 299 NGSTFWSPVFESGAANSKV----------------IGWQTRQ-------KNDKNQYVAVG 335
NG + FE K GW RQ K NQ A G
Sbjct 271 NGGKISNTFFEGEDDYDKYDRRENMVGYNIEHLFDNGWSVRQKLRYLHTKVTLNQVYAAG 330
Query 336 GVQTTPLPNSTADQAGTIKGWVYDPSIPGN 365
+ T L + + D + G+
Sbjct 331 WLNETALNRGYSGSGEKMSAIALDNQLDGS 360
Score = 25.8 bits (55), Expect = 0.017
Identities = 17/78 (22%), Positives = 31/78 (40%), Gaps = 6/78 (8%)
Query 665 EVGFKYEPITDKLFLTLSGFE------QKRDLSPDTNGNMARFEIKGIESSLRWQLQKNI 718
E G KYEP + + + ++ D ++ E KG+E L ++
Sbjct 510 EAGVKYEPPGGNSQFSAAVYRINQTNIATKEEPTDPYRSIGEIESKGVELEAISHLSDSV 569
Query 719 AIGSNFTYLDAQYSSIIP 736
+ + +TY D +Y P
Sbjct 570 RLQAAYTYTDIRYKKSSP 587
Score = 17.3 bits (33), Expect = 6.8
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query 54 NKTTVVPKRKVTSIYGTDSSVLDTP---RVVSQVSEQQFREDVIRSADDLVKYAPSITRG 110
N+T + K + T Y + + +S +S+ + D ++Y S +
Sbjct 532 NQTNIATKEEPTDPYRSIGEIESKGVELEAISHLSDSVRLQAAYTYTD--IRYKKSSPQE 589
Query 111 GGQNANFAPQ 120
G+ A +AP+
Sbjct 590 QGKRAVYAPR 599
Score = 16.9 bits (32), Expect = 8.9
Identities = 10/42 (24%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query 739 FSPFGFHADNATVWGDSNALNQRKAGRYD-AAGIPKYSASAY 779
F+P F +N V +Y+ G ++SA+ Y
Sbjct 488 FTPTSFADENGNVLEPMKGKQWEAGVKYEPPGGNSQFSAAVY 529
>E1W8M5 Ferrioxamine B receptor [Salmonella typhimurium (strain
SL1344)]
Length=702
Score = 64.3 bits (155), Expect = 2e-14
Identities = 88/390 (23%), Positives = 149/390 (38%), Gaps = 78/390 (20%)
Query 10 LVIALSVLGATLPLYVFAEETSHQAGDSESDVITLSDVVVTGATNKTTVVPKRKVTSIYG 69
L+I ++ GAT PL FA+ET+ ++D + ++ V +GAT T
Sbjct 15 LLIGGAIGGATFPL--FAQETT------KNDTVIVTSPVQSGATKLAT------------ 54
Query 70 TDSSVLDTPRVVSQVSEQQFREDVIRSADDLVKYAPSI--TRGGGQNANFAPQIRGQN-- 125
++TP+ VS ++ QQF E S V Y P + + G N +RG +
Sbjct 55 ---PDIETPQSVSIITRQQFEEQGATSVRQAVSYTPGVYSNQIGASNRFDYIVLRGFSDG 111
Query 126 --SEVFQDSQRIY-STRHPTNLNA----YEGADIVAGPTGVIFAPTSGSGGYINYLTKKP 178
V+ D ++ T ++L E ++V GP V++ S GG + ++KP
Sbjct 112 SLDNVYLDGLKMMGDTNSHSSLVVDPWFLEDIEVVRGPASVLYG-RSSPGGIVALTSRKP 170
Query 179 NFNKAETNISGTVGSIYSGKGAEPNFSVSIDHTAPISKELAFRVSATAQKTDDYYDNVKN 238
F+ +G +++G + + + ++ +A R+S + D + +K
Sbjct 171 AFD------AGGEVKLFAGNNNQRGAAFDVTGPLDDNERVAARLSGMTRYADSQFTPLKE 224
Query 239 NFNAFYGALAWRPNDRLRVDWNISYDDYYDFNVTHGWNRASQQSVDNGLYYKGRATPIIQ 298
A +L WR DR R+D ++Y +R + +GL Y+G P
Sbjct 225 ERYALMPSLTWRITDRTRLDL-MAY-----------LHRDPEGGSHSGLPYQGTVVP--Y 270
Query 299 NGSTFWSPVFESGAANSKV----------------IGWQTRQ-------KNDKNQYVAVG 335
NG + FE K GW RQ K NQ A G
Sbjct 271 NGGKISNTFFEGEDDYDKYDRRENMVGYNIEHLFDNGWSVRQKLRYLHTKVTLNQVYAAG 330
Query 336 GVQTTPLPNSTADQAGTIKGWVYDPSIPGN 365
+ T L + + D + G+
Sbjct 331 WLNETALNRGYSGSGEKMSAIALDNQLDGS 360
Score = 25.8 bits (55), Expect = 0.017
Identities = 17/78 (22%), Positives = 31/78 (40%), Gaps = 6/78 (8%)
Query 665 EVGFKYEPITDKLFLTLSGFE------QKRDLSPDTNGNMARFEIKGIESSLRWQLQKNI 718
E G KYEP + + + ++ D ++ E KG+E L ++
Sbjct 510 EAGVKYEPPGGNSQFSAAVYRINQTNIATKEEPTDPYRSIGEIESKGVELEAISHLSDSV 569
Query 719 AIGSNFTYLDAQYSSIIP 736
+ + +TY D +Y P
Sbjct 570 RLQAAYTYTDIRYKKSSP 587
Score = 17.3 bits (33), Expect = 6.8
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query 54 NKTTVVPKRKVTSIYGTDSSVLDTP---RVVSQVSEQQFREDVIRSADDLVKYAPSITRG 110
N+T + K + T Y + + +S +S+ + D ++Y S +
Sbjct 532 NQTNIATKEEPTDPYRSIGEIESKGVELEAISHLSDSVRLQAAYTYTD--IRYKKSSPQE 589
Query 111 GGQNANFAPQ 120
G+ A +AP+
Sbjct 590 QGKRAVYAPR 599
Score = 16.9 bits (32), Expect = 8.9
Identities = 10/42 (24%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query 739 FSPFGFHADNATVWGDSNALNQRKAGRYD-AAGIPKYSASAY 779
F+P F +N V +Y+ G ++SA+ Y
Sbjct 488 FTPTSFADENGNVLEPMKGKQWEAGVKYEPPGGNSQFSAAVY 529
Lambda K H a alpha
0.315 0.133 0.399 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1082400
Database: 2630f808a79a9502cde5bf209d1417ae.SwissProt.fasta
Posted date: May 8, 2024 8:01 PM
Number of letters in database: 1,404
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
