Comparative Genomics

ACIAD1551 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 365a5972e500578391c09ca579178c31.TrEMBL.fasta
           11 sequences; 1,428 total letters



Query= ACIAD1551

Length=60
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

N9MU25 Transposase Helix-turn-helix domain-containing protein [Ac...  79.3    1e-25
A0A0Q7G2Q5 Transposase [Acinetobacter sp. Root1280]                   80.5    1e-25
A0A833PDJ1 Transposase Helix-turn-helix domain-containing protein...  79.7    3e-25
A0A833PAE9 Transposase Helix-turn-helix domain-containing protein...  79.0    7e-25
N9KM87 Transposase Helix-turn-helix domain-containing protein [Ac...  78.6    8e-25
A0A7G2SE16 Uncharacterized protein [Acinetobacter sp]                 76.3    2e-24
A0A2S1FA69 Transposase family protein [Acinetobacter schindleri]      76.3    1e-23
A0A345B7X1 Transposase family protein [Acinetobacter johnsonii]       74.7    3e-23
A0A498CY13 Transposase family protein [Acinetobacter cumulans]        74.7    3e-23
A0A841NAD7 Transposase Helix-turn-helix domain-containing protein...  74.7    3e-23
A0A4R0EL91 Transposase family protein [Acinetobacter terrae]          74.7    4e-23


>N9MU25 Transposase Helix-turn-helix domain-containing protein 
[Acinetobacter sp. NIPH 298]
Length=90

 Score = 79.3 bits (194),  Expect = 1e-25
 Identities = 38/52 (73%), Positives = 43/52 (83%), Gaps = 0/52 (0%)

Query  6   VKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQVY  57
           +KYLDSKKLSDAQFKRY  +SRS F L+VEQM MQI  KGRP K CL+DQV+
Sbjct  1   MKYLDSKKLSDAQFKRYTSISRSTFSLMVEQMHMQIPSKGRPAKLCLEDQVF  52


>A0A0Q7G2Q5 Transposase [Acinetobacter sp. Root1280]
Length=131

 Score = 80.5 bits (197),  Expect = 1e-25
 Identities = 39/51 (76%), Positives = 44/51 (86%), Gaps = 0/51 (0%)

Query  6   VKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           +KYLDSKKLSD+QFKRY G+SRS F L+VEQMQMQI  KGRP K CL+DQV
Sbjct  1   MKYLDSKKLSDSQFKRYTGISRSTFSLMVEQMQMQIPSKGRPPKLCLEDQV  51


>A0A833PDJ1 Transposase Helix-turn-helix domain-containing protein 
[Acinetobacter bereziniae]
Length=131

 Score = 79.7 bits (195),  Expect = 3e-25
 Identities = 38/51 (75%), Positives = 44/51 (86%), Gaps = 0/51 (0%)

Query  6   VKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           +KYLDSKKLSD+QFKRY G+SRS FFL+VEQMQMQ+  KGRP K CL+ QV
Sbjct  1   MKYLDSKKLSDSQFKRYTGISRSTFFLMVEQMQMQVPSKGRPPKLCLEYQV  51


>A0A833PAE9 Transposase Helix-turn-helix domain-containing protein 
[Acinetobacter bereziniae]
Length=138

 Score = 79.0 bits (193),  Expect = 7e-25
 Identities = 38/51 (75%), Positives = 43/51 (84%), Gaps = 0/51 (0%)

Query  6   VKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           +KYLDSKKLSD+QFKRY G+SRS F L+VEQMQMQI+ KGRP K C  DQV
Sbjct  1   MKYLDSKKLSDSQFKRYTGISRSTFSLMVEQMQMQISSKGRPPKLCFADQV  51


>N9KM87 Transposase Helix-turn-helix domain-containing protein 
[Acinetobacter sp. NIPH 284]
Length=131

 Score = 78.6 bits (192),  Expect = 8e-25
 Identities = 38/51 (75%), Positives = 44/51 (86%), Gaps = 0/51 (0%)

Query  6   VKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           +KYL+SKKLSD+QFKRY G+S SIF L+VEQMQMQI  KGRP K CL+DQV
Sbjct  1   MKYLESKKLSDSQFKRYTGISSSIFSLMVEQMQMQIPAKGRPPKLCLEDQV  51


>A0A7G2SE16 Uncharacterized protein [Acinetobacter sp]
Length=92

 Score = 76.3 bits (186),  Expect = 2e-24
 Identities = 37/57 (65%), Positives = 44/57 (77%), Gaps = 0/57 (0%)

Query  2   HNLCVKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQVYS  58
           H LC+KY  SKK SD+QFKRYIG+SRS F  +V+ MQMQI  KGRP +  L+DQVYS
Sbjct  35  HYLCMKYFGSKKFSDSQFKRYIGISRSTFSPMVQDMQMQIFSKGRPPELYLEDQVYS  91


>A0A2S1FA69 Transposase family protein [Acinetobacter schindleri]
Length=159

 Score = 76.3 bits (186),  Expect = 1e-23
 Identities = 35/56 (63%), Positives = 45/56 (80%), Gaps = 0/56 (0%)

Query  1   MHNLCVKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           +HNL +KY+DS KLSD QFKRY G+SRS F+L+VEQ+Q  ++ KGRP K  L+DQV
Sbjct  24  VHNLRMKYIDSNKLSDPQFKRYTGISRSTFYLMVEQLQKHVSAKGRPPKLSLEDQV  79


>A0A345B7X1 Transposase family protein [Acinetobacter johnsonii]
Length=136

 Score = 74.7 bits (182),  Expect = 3e-23
 Identities = 34/56 (61%), Positives = 45/56 (80%), Gaps = 0/56 (0%)

Query  1   MHNLCVKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           MHNL +K++DSKKLS+ QFKRY G+S S F+++VEQ+Q Q+  KGRP K  L+DQV
Sbjct  1   MHNLLMKHIDSKKLSETQFKRYTGISWSTFYVMVEQLQKQVPAKGRPSKLSLEDQV  56


>A0A498CY13 Transposase family protein [Acinetobacter cumulans]
Length=136

 Score = 74.7 bits (182),  Expect = 3e-23
 Identities = 34/56 (61%), Positives = 45/56 (80%), Gaps = 0/56 (0%)

Query  1   MHNLCVKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           MHNL +K++DSKKLS+ QFKRY G+S S F+++VEQ+Q Q+  KGRP K  L+DQV
Sbjct  1   MHNLLMKHIDSKKLSETQFKRYTGISWSTFYVMVEQLQKQVPAKGRPSKLSLEDQV  56


>A0A841NAD7 Transposase Helix-turn-helix domain-containing protein 
[Acinetobacter lwoffii]
Length=136

 Score = 74.7 bits (182),  Expect = 3e-23
 Identities = 35/56 (63%), Positives = 44/56 (79%), Gaps = 0/56 (0%)

Query  1   MHNLCVKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           MHNL +KY+DS KLSD QFKRY G+S S F+L+VEQ+Q  ++ KGRP K  L+DQV
Sbjct  1   MHNLRMKYIDSNKLSDPQFKRYTGISWSTFYLMVEQLQKHVSAKGRPPKLSLEDQV  56


>A0A4R0EL91 Transposase family protein [Acinetobacter terrae]
Length=148

 Score = 74.7 bits (182),  Expect = 4e-23
 Identities = 35/56 (63%), Positives = 44/56 (79%), Gaps = 0/56 (0%)

Query  1   MHNLCVKYLDSKKLSDAQFKRYIGVSRSIFFLIVEQMQMQITPKGRPLKRCLKDQV  56
           MHNL +KY+DS KLSD QFKRY G+S S F+L+VEQ++M +  KGRP K  L+DQV
Sbjct  13  MHNLRMKYIDSNKLSDPQFKRYTGISWSTFYLMVEQLKMHVPAKGRPPKLSLEDQV  68



Lambda      K        H        a         alpha
   0.338    0.146    0.444    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 43475


  Database: 365a5972e500578391c09ca579178c31.TrEMBL.fasta
    Posted date:  May 30, 2024  4:11 AM
  Number of letters in database: 1,428
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40