Comparative Genomics

ACIAD1552 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 957ac2abc7c4b548fe317b57cbd0cc96.TrEMBL.fasta
           12 sequences; 2,585 total letters



Query= ACIAD1552

Length=63
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7D4X867 Transposase [Acinetobacter sp. FDAARGOS_724]               75.1    2e-22
A0A4R0E5A3 IS5 family transposase [Acinetobacter terrestris]          73.2    1e-21
A0A4R0Y0W8 IS5 family transposase [Acinetobacter sp. ANC 4862]        70.5    3e-20
A0A1H7XHS9 Transposase DDE domain-containing protein [Acinetobact...  68.2    3e-20
A0A7Y2LV07 IS5 family transposase [Acinetobacter sp. ANC 5414]        69.3    7e-20
A0A7Y2L9Y7 Transposase [Acinetobacter terrae]                         68.6    8e-20
A0A849AW01 Transposase family protein [Acinetobacter sp. ANC 5378]    65.1    1e-19
A0A7Y2RFV9 IS5 family transposase [Acinetobacter terrae]              68.6    1e-19
A0A7Y2LA73 IS5 family transposase [Acinetobacter terrae]              68.6    1e-19
N9L4B3 Transposase Helix-turn-helix domain-containing protein [Ac...  65.1    2e-19
A0A7Y2LE60 IS5 family transposase [Acinetobacter terrae]              67.8    2e-19
O33754 Transposase [Streptococcus pneumoniae]                         37.0    4e-08


>A0A7D4X867 Transposase [Acinetobacter sp. FDAARGOS_724]
Length=198

 Score = 75.1 bits (183),  Expect = 2e-22
 Identities = 33/44 (75%), Positives = 38/44 (86%), Gaps = 0/44 (0%)

Query  1   LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKKQSSCHSGKKKL  44
           LFNLP+N+  GEGIDWNVVI+D TEIPIQRPKKQ   +SGKKK+
Sbjct  22  LFNLPKNLPEGEGIDWNVVIVDATEIPIQRPKKQKRSYSGKKKV  65


>A0A4R0E5A3 IS5 family transposase [Acinetobacter terrestris]
Length=215

 Score = 73.2 bits (178),  Expect = 1e-21
 Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 0/43 (0%)

Query  1   LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKKQSSCHSGKKK  43
           LFNLP+++  GEGIDWNVVI+D TEIPIQRPKKQ   +SGKKK
Sbjct  37  LFNLPKDLPEGEGIDWNVVIVDATEIPIQRPKKQKKSYSGKKK  79


>A0A4R0Y0W8 IS5 family transposase [Acinetobacter sp. ANC 4862]
Length=271

 Score = 70.5 bits (171),  Expect = 3e-20
 Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query  1    LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKK-QSSCHSGKKK  43
            LFNLP+N+  GEGIDWNVVI+D TEIPIQRPKK Q   +SGKKK
Sbjct  94   LFNLPKNLPEGEGIDWNVVIVDATEIPIQRPKKTQKKSYSGKKK  137


 Score = 16.5 bits (31),  Expect = 0.78
 Identities = 7/20 (35%), Positives = 12/20 (60%), Gaps = 0/20 (0%)

Query  42  KKLTYLRFKQSFTVEPSKYY  61
           KKL+  +FK+   +  S +Y
Sbjct  7   KKLSETQFKRYTGISWSTFY  26


>A0A1H7XHS9 Transposase DDE domain-containing protein [Acinetobacter 
sp. DSM 11652]
Length=146

 Score = 68.2 bits (165),  Expect = 3e-20
 Identities = 33/61 (54%), Positives = 40/61 (66%), Gaps = 6/61 (10%)

Query  1   LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKKQSSCHSGKKKLTYLRFKQSFTVEPSKY  60
           LFNLP ++  GEGIDWNVVI+D TE P QRPKKQ   +SGK+K        +F V+   Y
Sbjct  22  LFNLPESLPEGEGIDWNVVIVDATETPTQRPKKQKKSYSGKRK------AHTFKVQAIIY  75

Query  61  Y  61
           Y
Sbjct  76  Y  76


>A0A7Y2LV07 IS5 family transposase [Acinetobacter sp. ANC 5414]
Length=271

 Score = 69.3 bits (168),  Expect = 7e-20
 Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 1/45 (2%)

Query  1    LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKK-QSSCHSGKKKL  44
            LFNLP+++  GEGIDWNVVI+D TEIPIQRPKK Q   +SGKKK+
Sbjct  94   LFNLPKDLPEGEGIDWNVVIVDATEIPIQRPKKTQKKSYSGKKKI  138


 Score = 17.7 bits (34),  Expect = 0.30
 Identities = 6/21 (29%), Positives = 11/21 (52%), Gaps = 0/21 (0%)

Query  13  GIDWNVVIIDVTEIPIQRPKK  33
           GI W+   + V ++ +  P K
Sbjct  19  GISWSTFYLMVEQLKMHVPAK  39


>A0A7Y2L9Y7 Transposase [Acinetobacter terrae]
Length=219

 Score = 68.6 bits (166),  Expect = 8e-20
 Identities = 30/43 (70%), Positives = 35/43 (81%), Gaps = 0/43 (0%)

Query  1    LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKKQSSCHSGKKK  43
            LFNLP+++  GE IDWNVVI+D TEIPIQRPKK    +SGKKK
Sbjct  116  LFNLPKDLPEGESIDWNVVIVDATEIPIQRPKKTEKSYSGKKK  158


>A0A849AW01 Transposase family protein [Acinetobacter sp. ANC 
5378]
Length=85

 Score = 65.1 bits (157),  Expect = 1e-19
 Identities = 28/33 (85%), Positives = 31/33 (94%), Gaps = 0/33 (0%)

Query  1   LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKK  33
           LFNLP+N+S GEGIDWNVVI+D TEIPIQRPKK
Sbjct  48  LFNLPKNLSEGEGIDWNVVIVDATEIPIQRPKK  80


>A0A7Y2RFV9 IS5 family transposase [Acinetobacter terrae]
Length=271

 Score = 68.6 bits (166),  Expect = 1e-19
 Identities = 32/44 (73%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query  1    LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKK-QSSCHSGKKK  43
            LFNLP+++  GEGIDWNVVI+D TEIPIQRPKK Q   +SGKKK
Sbjct  94   LFNLPKDLPEGEGIDWNVVIVDATEIPIQRPKKTQKKSYSGKKK  137


 Score = 16.2 bits (30),  Expect = 1.1
 Identities = 6/21 (29%), Positives = 10/21 (48%), Gaps = 0/21 (0%)

Query  13  GIDWNVVIIDVTEIPIQRPKK  33
           GI W+   + V ++    P K
Sbjct  19  GISWSTFYLMVEQLKKHVPTK  39


>A0A7Y2LA73 IS5 family transposase [Acinetobacter terrae]
Length=271

 Score = 68.6 bits (166),  Expect = 1e-19
 Identities = 32/44 (73%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query  1    LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKK-QSSCHSGKKK  43
            LFNLP+++  GEGIDWNVVI+D TEIPIQRPKK Q   +SGKKK
Sbjct  94   LFNLPKDLPEGEGIDWNVVIVDATEIPIQRPKKTQKKSYSGKKK  137


 Score = 17.7 bits (34),  Expect = 0.30
 Identities = 6/21 (29%), Positives = 11/21 (52%), Gaps = 0/21 (0%)

Query  13  GIDWNVVIIDVTEIPIQRPKK  33
           GI W+   + V ++ +  P K
Sbjct  19  GISWSTFYLMVEQLKMHVPAK  39


>N9L4B3 Transposase Helix-turn-helix domain-containing protein 
[Acinetobacter baumannii NIPH 80]
Length=104

 Score = 65.1 bits (157),  Expect = 2e-19
 Identities = 28/33 (85%), Positives = 31/33 (94%), Gaps = 0/33 (0%)

Query  1   LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKK  33
           LFNLP+N+ AGEGIDWNVVI+D TEIPIQRPKK
Sbjct  67  LFNLPKNLPAGEGIDWNVVIVDATEIPIQRPKK  99


>A0A7Y2LE60 IS5 family transposase [Acinetobacter terrae]
Length=263

 Score = 67.8 bits (164),  Expect = 2e-19
 Identities = 32/44 (73%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query  1    LFNLPRNISAGEGIDWNVVIIDVTEIPIQRPKK-QSSCHSGKKK  43
            LFNLP+++  GEGIDWNVVI+D TEIPIQRPKK Q   +SGKKK
Sbjct  94   LFNLPKSLPEGEGIDWNVVIVDATEIPIQRPKKTQKKNYSGKKK  137


 Score = 16.2 bits (30),  Expect = 1.1
 Identities = 6/21 (29%), Positives = 10/21 (48%), Gaps = 0/21 (0%)

Query  13  GIDWNVVIIDVTEIPIQRPKK  33
           GI W+   + V ++    P K
Sbjct  19  GISWSTFYLMVEQLKKHVPTK  39


>O33754 Transposase [Streptococcus pneumoniae]
Length=271

 Score = 37.0 bits (84),  Expect = 4e-08
 Identities = 20/26 (77%), Positives = 21/26 (81%), Gaps = 1/26 (4%)

Query  19   VIIDVTEIPIQRPKK-QSSCHSGKKK  43
            V IDVTE PIQRPKK QS  +SGKKK
Sbjct  113  VAIDVTESPIQRPKKNQSKNYSGKKK  138



Lambda      K        H        a         alpha
   0.327    0.141    0.439    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 81396


  Database: 957ac2abc7c4b548fe317b57cbd0cc96.TrEMBL.fasta
    Posted date:  May 9, 2024  4:10 AM
  Number of letters in database: 2,585
  Number of sequences in database:  12



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40