BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f7141f70d473b06826dbee2856b3c3ab.SwissProt.fasta
19 sequences; 5,023 total letters
Query= ACIAD1557
Length=200
Score E
Sequences producing significant alignments: (Bits) Value
Q53514 Nodulation protein S [Rhizobium tropici] 65.1 2e-16
P19441 Nodulation protein S [Sinorhizobium fredii (strain NBRC 10... 62.4 2e-15
P26026 Nodulation protein S [Bradyrhizobium diazoefficiens (strai... 56.6 2e-13
Q02007 Nodulation protein S [Rhizobium fredii] 40.4 7e-08
Q2S0I2 Ribosomal RNA small subunit methyltransferase A [Salinibac... 40.0 2e-07
P06573 rRNA adenine N-6-methyltransferase [Streptococcus sanguinis] 37.7 9e-07
P21236 rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae] 37.7 9e-07
P20173 rRNA adenine N-6-methyltransferase [Enterococcus faecalis ... 37.7 9e-07
P10738 rRNA adenine N-6-methyltransferase [Escherichia coli] 37.7 9e-07
P0A4D5 rRNA adenine N-6-methyltransferase [Enterococcus faecalis] 36.6 2e-06
P0A4D6 rRNA adenine N-6-methyltransferase [Clostridium perfringens] 36.6 2e-06
P9WK03 Uncharacterized methyltransferase Rv0089 [Mycobacterium tu... 36.2 2e-06
P9WK02 Uncharacterized methyltransferase MT0098 [Mycobacterium tu... 36.2 2e-06
P65347 Uncharacterized methyltransferase Mb0092 [Mycobacterium bo... 36.2 2e-06
P12999 Malonyl-[acyl-carrier protein] O-methyltransferase [Escher... 36.2 3e-06
A1S8P4 Ribosomal RNA large subunit methyltransferase G [Shewanell... 35.4 6e-06
Q00014 rRNA adenine N-6-methyltransferase [Limosilactobacillus re... 34.3 1e-05
A3KQ55 7SK snRNA methylphosphate capping enzyme [Danio rerio] 34.3 2e-05
P9WEU0 S-adenosyl-L-methionine-dependent Diels-Alderase iliD [Hyp... 33.9 2e-05
>Q53514 Nodulation protein S [Rhizobium tropici]
Length=238
Score = 65.1 bits (157), Expect = 2e-16
Identities = 42/142 (30%), Positives = 68/142 (48%), Gaps = 10/142 (7%)
Query 16 NDPWGYDHHWYEARKR-QICLALLTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVDVSA 74
+DPW D + +E ++ Q+ L L Q ++ LE+GC+ G + LA +L +DV
Sbjct 53 DDPWRLDGNPFERKRHAQMLLLSLAQGPIANALEVGCAAGAFTEKLAPHCQRLTVIDVVP 112
Query 75 HAIHWASQRLQNLNHVSVKQKKIPENFPEQKFDLIVISEVAYYL-SLTELHEFIDQLKDS 133
AI +R+ H+S + + E+ FDLIV++EV YYL + E+ + L
Sbjct 113 EAIDRTRRRMNKPAHISWVVSDVQQFSSEELFDLIVVAEVLYYLGDIAEMRMAVGNLLRM 172
Query 134 LTLQGEIL--------CCHWRH 147
L G ++ C W H
Sbjct 173 LAPGGHLVFGSARDANCQRWGH 194
>P19441 Nodulation protein S [Sinorhizobium fredii (strain NBRC
101917 / NGR234)]
Length=216
Score = 62.4 bits (150), Expect = 2e-15
Identities = 39/123 (32%), Positives = 62/123 (50%), Gaps = 6/123 (5%)
Query 17 DPWGYDHHWYEARKRQICLAL-LTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVDVSAH 75
DPW D + +E + L L L+Q ++ LE+GC+ G + LA +L +DV
Sbjct 34 DPWRLDANAFEQERHSQMLRLSLSQGPITNALEVGCAAGAFTEKLAPYCKRLTVIDVVPR 93
Query 76 AIHWASQRLQNLNHVSVKQKKIPENFPEQKFDLIVISEVAYYLS-----LTELHEFIDQL 130
AI QR++ +H++ + + +Q FDLIV++EV YYL T +H + L
Sbjct 94 AIARTRQRMKESSHINWIVADVRQFSTQQLFDLIVVAEVLYYLEDVAAIRTAVHNLVSML 153
Query 131 KDS 133
S
Sbjct 154 APS 156
>P26026 Nodulation protein S [Bradyrhizobium diazoefficiens (strain
JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA
110)]
Length=209
Score = 56.6 bits (135), Expect = 2e-13
Identities = 42/142 (30%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query 16 NDPWGYDHHWYEARKRQICLALLTQPR-YSSVLEIGCSNGHLSFHLAQRADQLLCVDVSA 74
+DPW D +E ++ L + + +S LE+GC+ G + LA ++L VDV
Sbjct 17 DDPWRLDTSAFEQQRYAQMLRMSRRDGDAASALEVGCAAGAFTEMLAPLCERLTVVDVMP 76
Query 75 HAIHWASQRLQNLNHVSVKQKKIPENFPEQKFDLIVISEVAYYL-SLTELHEFIDQLKDS 133
AI R +H+S I ++FDLIV++EV YYL + E+H I L
Sbjct 77 QAIERTRLRTGKWSHISWVTCDIQRFSTTEQFDLIVVAEVLYYLRDVVEMHAAIRNLVSM 136
Query 134 LTLQGEI--------LCCHWRH 147
L + +C W H
Sbjct 137 LAPDETLIFGSARDEICQRWGH 158
>Q02007 Nodulation protein S [Rhizobium fredii]
Length=175
Score = 40.4 bits (93), Expect = 7e-08
Identities = 25/79 (32%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query 60 LAQRADQLLCVDVSAHAIHWASQRLQNLNHVSVKQKKIPENFPEQKFDLIVISEVAYYLS 119
LA +L +DV AI QR++ +H++ + + +Q FDLIV++EV YYL
Sbjct 37 LAPYCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFSTQQLFDLIVVAEVLYYLE 96
Query 120 -----LTELHEFIDQLKDS 133
T +H + L S
Sbjct 97 DVAAIRTAVHNLVSMLAPS 115
>Q2S0I2 Ribosomal RNA small subunit methyltransferase A [Salinibacter
ruber (strain DSM 13855 / M31)]
Length=296
Score = 40.0 bits (92), Expect = 2e-07
Identities = 30/109 (28%), Positives = 52/109 (48%), Gaps = 6/109 (6%)
Query 38 LTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRL--QNLNHVSVKQK 95
LT P + V+E+G G L+ LA+R D+L +++ A+ +R+ ++ V++
Sbjct 58 LTAPPEAHVVEVGAGTGVLTERLAERHDRLTALEIDERAVEVLRERVPEADVRETDVRET 117
Query 96 KIPENFPEQKFDLIVISEVAYYLSLTELHEFIDQ----LKDSLTLQGEI 140
E+ L VIS YYL+ L + Q + LT+Q E+
Sbjct 118 DWAALADEKGGPLRVISNTPYYLTSPILFALLGQRDCLAEAVLTMQKEV 166
>P06573 rRNA adenine N-6-methyltransferase [Streptococcus sanguinis]
Length=245
Score = 37.7 bits (86), Expect = 9e-07
Identities = 21/77 (27%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query 45 SVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRLQ-NLNHVSVKQKKIPENFP- 102
+V EIG GHL+ LA+ + Q+ +++ +H + +S++L+ N+ + Q + FP
Sbjct 32 TVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNIRVTLIHQDILQFQFPN 91
Query 103 EQKFDLIVISEVAYYLS 119
+Q++ ++ + Y+LS
Sbjct 92 KQRYK--IVGSIPYHLS 106
>P21236 rRNA adenine N-6-methyltransferase [Streptococcus pneumoniae]
Length=245
Score = 37.7 bits (86), Expect = 9e-07
Identities = 21/77 (27%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query 45 SVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRLQ-NLNHVSVKQKKIPENFP- 102
+V EIG GHL+ LA+ + Q+ +++ +H + +S++L+ N+ + Q + FP
Sbjct 32 TVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNIRVTLIHQDILQFQFPN 91
Query 103 EQKFDLIVISEVAYYLS 119
+Q++ ++ + Y+LS
Sbjct 92 KQRYK--IVGSIPYHLS 106
>P20173 rRNA adenine N-6-methyltransferase [Enterococcus faecalis
(strain ATCC 700802 / V583)]
Length=245
Score = 37.7 bits (86), Expect = 9e-07
Identities = 21/77 (27%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query 45 SVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRLQ-NLNHVSVKQKKIPENFP- 102
+V EIG GHL+ LA+ + Q+ +++ +H + +S++L+ N+ + Q + FP
Sbjct 32 TVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNIRVTLIHQDILQFQFPN 91
Query 103 EQKFDLIVISEVAYYLS 119
+Q++ ++ + Y+LS
Sbjct 92 KQRYK--IVGNIPYHLS 106
>P10738 rRNA adenine N-6-methyltransferase [Escherichia coli]
Length=245
Score = 37.7 bits (86), Expect = 9e-07
Identities = 21/77 (27%), Positives = 46/77 (60%), Gaps = 4/77 (5%)
Query 45 SVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRLQNLNHVS-VKQKKIPENFP- 102
+V EIG GHL+ LA+ + Q+ +++ +H + +S++L++ V+ + Q + FP
Sbjct 32 TVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKSNTRVTLIHQDILQFQFPN 91
Query 103 EQKFDLIVISEVAYYLS 119
+Q++ ++ + Y+LS
Sbjct 92 KQRYK--IVGNIPYHLS 106
>P0A4D5 rRNA adenine N-6-methyltransferase [Enterococcus faecalis]
Length=245
Score = 36.6 bits (83), Expect = 2e-06
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query 45 SVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRLQ-NLNHVSVKQKKIPENFP- 102
+V EIG GHL+ LA+ + Q+ +++ +H + +S++L+ N + Q + FP
Sbjct 32 TVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPN 91
Query 103 EQKFDLIVISEVAYYLS 119
+Q++ ++ + Y+LS
Sbjct 92 KQRYK--IVGSIPYHLS 106
>P0A4D6 rRNA adenine N-6-methyltransferase [Clostridium perfringens]
Length=245
Score = 36.6 bits (83), Expect = 2e-06
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query 45 SVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRLQ-NLNHVSVKQKKIPENFP- 102
+V EIG GHL+ LA+ + Q+ +++ +H + +S++L+ N + Q + FP
Sbjct 32 TVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPN 91
Query 103 EQKFDLIVISEVAYYLS 119
+Q++ ++ + Y+LS
Sbjct 92 KQRYK--IVGSIPYHLS 106
>P9WK03 Uncharacterized methyltransferase Rv0089 [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=197
Score = 36.2 bits (82), Expect = 2e-06
Identities = 24/106 (23%), Positives = 43/106 (41%), Gaps = 6/106 (6%)
Query 16 NDPWGYDHHWYEARKRQICLALLTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVDVSAH 75
+ PW + H+ + L VL++GC +G L+ LA+R + VD+ A
Sbjct 2 DQPWNANIHYDALLDAMVPLGT------QCVLDVGCGDGLLAARLARRIPYVTAVDIDAP 55
Query 76 AIHWASQRLQNLNHVSVKQKKIPENFPEQKFDLIVISEVAYYLSLT 121
+ A R N + + P FD +V + +++ T
Sbjct 56 VLRRAQTRFANAPIRWLHADIMTAELPNAGFDAVVSNAALHHIEDT 101
>P9WK02 Uncharacterized methyltransferase MT0098 [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=197
Score = 36.2 bits (82), Expect = 2e-06
Identities = 24/106 (23%), Positives = 43/106 (41%), Gaps = 6/106 (6%)
Query 16 NDPWGYDHHWYEARKRQICLALLTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVDVSAH 75
+ PW + H+ + L VL++GC +G L+ LA+R + VD+ A
Sbjct 2 DQPWNANIHYDALLDAMVPLGT------QCVLDVGCGDGLLAARLARRIPYVTAVDIDAP 55
Query 76 AIHWASQRLQNLNHVSVKQKKIPENFPEQKFDLIVISEVAYYLSLT 121
+ A R N + + P FD +V + +++ T
Sbjct 56 VLRRAQTRFANAPIRWLHADIMTAELPNAGFDAVVSNAALHHIEDT 101
>P65347 Uncharacterized methyltransferase Mb0092 [Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97)]
Length=197
Score = 36.2 bits (82), Expect = 2e-06
Identities = 24/106 (23%), Positives = 43/106 (41%), Gaps = 6/106 (6%)
Query 16 NDPWGYDHHWYEARKRQICLALLTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVDVSAH 75
+ PW + H+ + L VL++GC +G L+ LA+R + VD+ A
Sbjct 2 DQPWNANIHYDALLDAMVPLGT------QCVLDVGCGDGLLAARLARRIPYVTAVDIDAP 55
Query 76 AIHWASQRLQNLNHVSVKQKKIPENFPEQKFDLIVISEVAYYLSLT 121
+ A R N + + P FD +V + +++ T
Sbjct 56 VLRRAQTRFANAPIRWLHADIMTAELPNAGFDAVVSNAALHHIEDT 101
>P12999 Malonyl-[acyl-carrier protein] O-methyltransferase [Escherichia
coli (strain K12)]
Length=251
Score = 36.2 bits (82), Expect = 3e-06
Identities = 18/49 (37%), Positives = 29/49 (59%), Gaps = 0/49 (0%)
Query 35 LALLTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQR 83
LA+L Q +Y+ VL+ GC G +S H +R Q+ +D+S + A Q+
Sbjct 35 LAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQK 83
>A1S8P4 Ribosomal RNA large subunit methyltransferase G [Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B)]
Length=383
Score = 35.4 bits (80), Expect = 6e-06
Identities = 21/53 (40%), Positives = 31/53 (58%), Gaps = 2/53 (4%)
Query 32 QICLALLTQPRYSSVLEIGCSNGHLSFHLAQRAD--QLLCVDVSAHAIHWASQ 82
++ +A L Q +SSV+++GC NG L+ AQ +L VD SA A+ A Q
Sbjct 228 RLMMANLPQGHFSSVIDLGCGNGVLALKAAQTYPDARLYLVDESAMAVESARQ 280
>Q00014 rRNA adenine N-6-methyltransferase [Limosilactobacillus
reuteri]
Length=244
Score = 34.3 bits (77), Expect = 1e-05
Identities = 19/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query 45 SVLEIGCSNGHLSFHLAQRADQLLCVDVSAHAIHWASQRLQNLNHVSVKQKKIPE-NFPE 103
+++EIG GH SF LA+R + + +++ +L + V K I + FP+
Sbjct 33 NIIEIGSGKGHFSFELAKRCNYVTAIEIDPKLCRITKNKLIEYENFQVINKDILQFKFPK 92
Query 104 QKFDLIVISEVAYYLSLTELHEFI 127
K + + Y +S + + +
Sbjct 93 NK-SYKIFGNIPYNISTDIIRKIV 115
>A3KQ55 7SK snRNA methylphosphate capping enzyme [Danio rerio]
Length=645
Score = 34.3 bits (77), Expect = 2e-05
Identities = 18/58 (31%), Positives = 34/58 (59%), Gaps = 3/58 (5%)
Query 42 RYSSVLEIGCSNGHLSFHLAQ--RADQLLCVDVSAHAIHWASQRLQN-LNHVSVKQKK 96
R VL++GC+ GHL+ +A+ R ++ +D+ IH A Q +++ L+ V V+ +
Sbjct 392 RGKDVLDLGCNTGHLTLFIAKNWRPASIVGLDIDGSLIHAARQNIRHYLSEVQVQHSR 449
>P9WEU0 S-adenosyl-L-methionine-dependent Diels-Alderase iliD
[Hypocrea jecorina (strain QM6a)]
Length=305
Score = 33.9 bits (76), Expect = 2e-05
Identities = 19/69 (28%), Positives = 32/69 (46%), Gaps = 11/69 (16%)
Query 19 WGYDHHW-------YEARKRQICLALLTQPRYSSVLEIGCSNGHLSFHLAQRADQLLCVD 71
W D +W Q + +L P+ S VL+ GC GH++ ++AQ ++ +D
Sbjct 45 WDKDTYWPFPLGSKLRRSMEQKLMEILALPKGSRVLDAGCGVGHVARYMAQHGMRVFGID 104
Query 72 VSAHAIHWA 80
+ I WA
Sbjct 105 I----IDWA 109
Lambda K H a alpha
0.325 0.137 0.443 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 667550
Database: f7141f70d473b06826dbee2856b3c3ab.SwissProt.fasta
Posted date: May 9, 2024 7:49 PM
Number of letters in database: 5,023
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
