BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f2842c515e6619c1803fa1fa51e8ecc2.SwissProt.fasta
2 sequences; 804 total letters
Query= ACIAD1560
Length=64
Score E
Sequences producing significant alignments: (Bits) Value
Q6Q272 p-hydroxyphenylacetate 3-hydroxylase, oxygenase component ... 121 5e-39
Q0S811 Flavin-dependent monooxygenase, oxygenase subunit HsaA [Rh... 42.7 1e-10
>Q6Q272 p-hydroxyphenylacetate 3-hydroxylase, oxygenase component
[Acinetobacter baumannii]
Length=422
Score = 121 bits (303), Expect = 5e-39
Identities = 57/63 (90%), Positives = 61/63 (97%), Gaps = 0/63 (0%)
Query 1 MCIEAVDRLMASAGATSFLDNSELQRLFRDSHMTGAHAYTDYDVCAQILGRAVMGMEADP 60
MCIEAVDRLMA+AGATSF+DNSELQRLFRD+HMTGAHAYTDYDVCAQILGR +MGME DP
Sbjct 360 MCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPDP 419
Query 61 TMV 63
TMV
Sbjct 420 TMV 422
>Q0S811 Flavin-dependent monooxygenase, oxygenase subunit HsaA
[Rhodococcus jostii (strain RHA1)]
Length=382
Score = 42.7 bits (99), Expect = 1e-10
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 0/61 (0%)
Query 3 IEAVDRLMASAGATSFLDNSELQRLFRDSHMTGAHAYTDYDVCAQILGRAVMGMEADPTM 62
I ++D+L S+GAT+ + + LQR +RD+H HA D + + G G+ TM
Sbjct 322 ISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGLPITDTM 381
Query 63 V 63
V
Sbjct 382 V 382
Lambda K H a alpha
0.333 0.138 0.419 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 32766
Database: f2842c515e6619c1803fa1fa51e8ecc2.SwissProt.fasta
Posted date: May 14, 2024 6:32 AM
Number of letters in database: 804
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40