BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: e517125da604045515425118fa850fb6.SwissProt.fasta
           4 sequences; 1,227 total letters



Query= ACIAD1583

Length=311
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q55032 Type 2A encapsulin shell protein SrpI [Synechococcus elong...  461     2e-169
I3NID5 Type 2A encapsulin shell protein [Mycolicibacterium paratu...  447     1e-163
P46841 Type 2A encapsulin shell protein [Mycobacterium leprae (st...  435     5e-159
Q48899 Type 2A encapsulin shell protein [Mycobacterium avium]         427     6e-156


>Q55032 Type 2A encapsulin shell protein SrpI [Synechococcus elongatus 
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=306

 Score = 461 bits (1187),  Expect = 2e-169
 Identities = 226/308 (73%), Positives = 261/308 (85%), Gaps = 2/308 (1%)

Query  1    MTKNTEKVQLALGDHAARQLANATKTVPQLSTITPRWLTHLLQWIPVEAGIYRVNRVNNT  60
            MT N    QLAL D AARQLANATKTVPQL TITPRWL  LL W PVEAGIYRVN+V + 
Sbjct  1    MTDNAP--QLALRDVAARQLANATKTVPQLRTITPRWLVRLLHWTPVEAGIYRVNQVKDA  58

Query  61   DDIQVACTQRDEATLPQTFVDYDPQPREYFLNGVSTVLDIHTRVADLYSSPHDQIKEQLR  120
              I VAC++RDE+ LP+TFVDY   PREY L+ V+TV+D+HTR++DLYS+PHDQI+EQLR
Sbjct  59   SQITVACSERDESELPETFVDYIDNPREYLLSAVNTVVDVHTRISDLYSNPHDQIREQLR  118

Query  121  LTIETIKERQESELINNPEYGLLASVSDEQRISTLNGPPTPDDLDDLLRKVWKEPGFFLA  180
            LTIE +KERQESELIN+ EYGLL +V+  Q + T NG PTPDDLD+LL +VWKEP FFLA
Sbjct  119  LTIEIMKERQESELINSREYGLLNNVAPGQLVHTRNGAPTPDDLDELLIRVWKEPAFFLA  178

Query  181  HPDAIAAFGRECTRRGVPPPTVSLFGSQFITWRGIPLIPSNKIPVEDGKTKILLLRVGEK  240
            HP AIAAFGRECTRRGVPP TVSLFGS FITWRG+PLIPS+K+P+E+GKTKILLLRVGE 
Sbjct  179  HPQAIAAFGRECTRRGVPPATVSLFGSSFITWRGVPLIPSDKVPLENGKTKILLLRVGES  238

Query  241  RQGIVGLFQPGLAGEQSPGLSVRFMGINRNAIASYLISLYCSLAVLTEDALAVLDDVEID  300
            RQG+VGL+QP L GEQ  GLSVRFMGINR A+ASYL+SLYCSLAVLT+DALAVLD+V++ 
Sbjct  239  RQGVVGLYQPNLPGEQGMGLSVRFMGINRKALASYLVSLYCSLAVLTDDALAVLDNVDVT  298

Query  301  KYHDYPVN  308
            +YH Y  N
Sbjct  299  QYHTYRYN  306


>I3NID5 Type 2A encapsulin shell protein [Mycolicibacterium paratuberculosis 
(strain ATCC BAA-968 / K-10)]
Length=307

 Score = 447 bits (1149),  Expect = 1e-163
 Identities = 218/297 (73%), Positives = 250/297 (84%), Gaps = 2/297 (1%)

Query  11   ALGDHAARQLANATKTVPQLSTITPRWLTHLLQWIPVEAGIYRVNRVNNTDDIQVACTQR  70
            ALGD AARQLANATKTVPQLSTITPRWL HLL W+PVEAGIYRVNRV N + + +     
Sbjct  10   ALGDLAARQLANATKTVPQLSTITPRWLLHLLNWVPVEAGIYRVNRVVNPEQVAIKAEAG  69

Query  71   --DEATLPQTFVDYDPQPREYFLNGVSTVLDIHTRVADLYSSPHDQIKEQLRLTIETIKE  128
               E  LPQT+VDY+  PREY L  +ST++DIHTRV+DLYSSPHDQI +QLRLTIETIKE
Sbjct  70   AGSEEPLPQTYVDYETSPREYTLRSISTLVDIHTRVSDLYSSPHDQIAQQLRLTIETIKE  129

Query  129  RQESELINNPEYGLLASVSDEQRISTLNGPPTPDDLDDLLRKVWKEPGFFLAHPDAIAAF  188
            RQE ELIN+PEYGLLA  + EQ I TL G PTPDDLD L+ KVWK P FFL HP  IAAF
Sbjct  130  RQELELINSPEYGLLAQATPEQTIQTLAGAPTPDDLDALITKVWKTPSFFLTHPLGIAAF  189

Query  189  GRECTRRGVPPPTVSLFGSQFITWRGIPLIPSNKIPVEDGKTKILLLRVGEKRQGIVGLF  248
            GRE T RGVPPP VSLFG+QFITWRGIPLIPS+K+PVEDGKTK +L+R GE+RQG+VGLF
Sbjct  190  GREATYRGVPPPVVSLFGAQFITWRGIPLIPSDKVPVEDGKTKFILVRTGEERQGVVGLF  249

Query  249  QPGLAGEQSPGLSVRFMGINRNAIASYLISLYCSLAVLTEDALAVLDDVEIDKYHDY  305
            QPGL GEQ+PGLSVRF GIN++AIA+YL++LY SLAVLT+DALAVLDDV +D++H+Y
Sbjct  250  QPGLVGEQAPGLSVRFTGINQSAIATYLVTLYTSLAVLTDDALAVLDDVAVDQFHEY  306


>P46841 Type 2A encapsulin shell protein [Mycobacterium leprae 
(strain TN)]
Length=307

 Score = 435 bits (1119),  Expect = 5e-159
 Identities = 213/297 (72%), Positives = 248/297 (84%), Gaps = 2/297 (1%)

Query  11   ALGDHAARQLANATKTVPQLSTITPRWLTHLLQWIPVEAGIYRVNRVNNTDDIQVACTQR  70
            ALGD AA QLANATKTVPQLSTITPRWL HLL W+PVEAG+YRVNRV N + + V     
Sbjct  10   ALGDLAAGQLANATKTVPQLSTITPRWLLHLLNWVPVEAGVYRVNRVVNPERVAVKAEAG  69

Query  71   --DEATLPQTFVDYDPQPREYFLNGVSTVLDIHTRVADLYSSPHDQIKEQLRLTIETIKE  128
               EA LP+TFVDY+  PREY L  +ST+LDIHTRV+DLYSSPHDQI +QLRLTIETIKE
Sbjct  70   AGTEAPLPETFVDYETSPREYTLRTISTLLDIHTRVSDLYSSPHDQITQQLRLTIETIKE  129

Query  129  RQESELINNPEYGLLASVSDEQRISTLNGPPTPDDLDDLLRKVWKEPGFFLAHPDAIAAF  188
            RQE EL+N+PE+GLLA V+ EQ I T  G PTPDDLD L+ KVWK P FFL HP  IAAF
Sbjct  130  RQECELVNSPEFGLLAQVTPEQTIRTFAGAPTPDDLDALITKVWKMPSFFLTHPQGIAAF  189

Query  189  GRECTRRGVPPPTVSLFGSQFITWRGIPLIPSNKIPVEDGKTKILLLRVGEKRQGIVGLF  248
            GRE T RGVPP  VSLFG+QFITWRGIPLIPS+K+PV+DG+TK +L+R GE+RQG+VGLF
Sbjct  190  GREATYRGVPPVVVSLFGAQFITWRGIPLIPSDKVPVQDGETKFILVRTGEERQGVVGLF  249

Query  249  QPGLAGEQSPGLSVRFMGINRNAIASYLISLYCSLAVLTEDALAVLDDVEIDKYHDY  305
            QPGL GEQ+PGLSVRF GIN+ AIA+YL++LY SLAVLT+DALAVLD+V +D++H+Y
Sbjct  250  QPGLVGEQAPGLSVRFTGINQAAIATYLVTLYTSLAVLTDDALAVLDNVAVDQFHEY  306


>Q48899 Type 2A encapsulin shell protein [Mycobacterium avium]
Length=307

 Score = 427 bits (1099),  Expect = 6e-156
 Identities = 213/298 (71%), Positives = 246/298 (83%), Gaps = 4/298 (1%)

Query  11   ALGDHAARQLANATKTVPQLSTITPRWLTHLLQWIPVEAGIYRVNRVNNTDDIQVACTQR  70
            ALGD AARQLANATKTVPQLSTITPRWL HLL W+PVEAGIYRVNRV N + + +     
Sbjct  10   ALGDLAARQLANATKTVPQLSTITPRWLLHLLNWVPVEAGIYRVNRVVNPEQVAIKAEAG  69

Query  71   --DEATLPQTFVDYDPQPREYFLNGVSTVLDIHTRVADLYSSPHDQIKEQLRLTIETIKE  128
               E  +PQT+VDY+  PREY L  +ST++DIHTRV+DLYSSPHDQI +QLRLTIETIKE
Sbjct  70   AGSEEPVPQTYVDYETSPREYTLRSISTLVDIHTRVSDLYSSPHDQIAQQLRLTIETIKE  129

Query  129  RQESELINNPEYGLLASVSDEQRISTLNGPPTPDDLDDLLRKVWKEPGFFLAHPDAIAAF  188
            RQE ELIN+PEYGLLA  +  Q I TL G PTPDDLD L+ KVWK P FFL HP  IAAF
Sbjct  130  RQELELINSPEYGLLAQATGRQTIQTLAGAPTPDDLDALITKVWKTPSFFLTHPLGIAAF  189

Query  189  GRECTRRGVPPPTVSLFG-SQFITWRGIPLIPSNKIPVEDGKTKILLLRVGEKRQGIVGL  247
            GRE T RGVPPP VSLFG +QFITW GI L PS+K+PVEDGKTK +L+R GE+RQG+VGL
Sbjct  190  GREATYRGVPPPVVSLFGPTQFITWHGIRL-PSDKVPVEDGKTKFILVRTGEERQGVVGL  248

Query  248  FQPGLAGEQSPGLSVRFMGINRNAIASYLISLYCSLAVLTEDALAVLDDVEIDKYHDY  305
            FQPGL GEQ+PGLSVRF GIN++AIA+YL++LY SLAVLT+DALAVLDDV +D++H+Y
Sbjct  249  FQPGLVGEQAPGLSVRFTGINQSAIATYLVTLYTSLAVLTDDALAVLDDVAVDQFHEY  306



Lambda      K        H        a         alpha
   0.320    0.138    0.414    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 297825


  Database: e517125da604045515425118fa850fb6.SwissProt.fasta
    Posted date:  May 9, 2024  9:49 PM
  Number of letters in database: 1,227
  Number of sequences in database:  4



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40