BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6d9acb8992b61eedd3648084094ef70b.SwissProt.fasta
18 sequences; 4,638 total letters
Query= ACIAD1586
Length=542
Score E
Sequences producing significant alignments: (Bits) Value
P75851 Putative aliphatic sulfonates transport permease protein S... 160 1e-48
P40401 Putative aliphatic sulfonates transport permease protein S... 155 5e-47
Q47539 Taurine transport system permease protein TauC [Escherichi... 141 1e-41
Q51881 Nitrate import permease protein NrtB [Phormidium laminosum] 125 1e-35
Q2YJB4 Probable ABC transporter permease protein BAB2_1148 [Bruce... 120 2e-34
Q576D9 Probable ABC transporter permease protein BruAb2_1124 [Bru... 120 2e-34
Q8YDR8 Probable ABC transporter permease protein BMEII0107 [Bruce... 119 4e-34
Q8FUN2 Probable ABC transporter permease protein BRA1188/BS1330_I... 119 5e-34
Q57856 Putative ABC transporter permease protein MJ0413 [Methanoc... 120 5e-34
Q5MZ55 Bicarbonate transport system permease protein CmpB [Synech... 109 3e-30
Q55106 Bicarbonate transport system permease protein CmpB [Synech... 109 3e-30
Q57306 Probable ABC transporter permease protein HI_0355 [Haemoph... 108 5e-30
P38044 Nitrate import permease protein NrtB [Synechococcus elonga... 107 2e-29
Q55461 Bicarbonate transport system permease protein CmpB [Synech... 103 6e-28
Q9K9G6 Formylaminopyrimidine transport permease protein ThiX [Hal... 93.2 1e-24
Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monoc... 60.8 6e-14
G2JZ43 Carnitine transport permease protein OpuCB [Listeria monoc... 60.8 6e-14
Q8ZPK1 Osmoprotectant import permease protein OsmY [Salmonella ty... 55.1 7e-12
>P75851 Putative aliphatic sulfonates transport permease protein
SsuC [Escherichia coli (strain K12)]
Length=263
Score = 160 bits (404), Expect = 1e-48
Identities = 89/254 (35%), Positives = 141/254 (56%), Gaps = 7/254 (3%)
Query 42 WIVPVCLFALWWIASNEQWMPAQILPTPKDTWHSFVEI-ASQDLWSQLAISLERFGLGLL 100
W +PV + A+W +AS+ W+ +ILP+P+ +F + AS +LW LAIS R +G
Sbjct 15 WFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFS 74
Query 101 SGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKA 160
G G+ LG++ G SR E+ L + L +P LA +PL+++W GI+ S KIF++
Sbjct 75 IGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALG 134
Query 161 TMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWT 220
T+ PI ++T G+R+I L EMA + + L ++LP LP G+R A+ W
Sbjct 135 TLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL 194
Query 221 SLIAVELLASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFWPH 280
+LI E ++++ GIGYL + R+ Q D+V V I + A +G + D +ER ++ W
Sbjct 195 TLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNP 254
Query 281 AALSAHTFHKKNRT 294
A +H K T
Sbjct 255 A------YHLKEAT 262
Score = 136 bits (343), Expect = 5e-40
Identities = 76/239 (32%), Positives = 131/239 (55%), Gaps = 1/239 (0%)
Query 300 WVLPLSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLI 359
W LP+ +V +W ++S +S++ILP+P V+ A W+ L + S +RA++G
Sbjct 15 WFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFS 74
Query 360 IGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFISIA 419
IGG +G +G++ GL + E LL ++ LR + A IPL+ WFG+++ +KI +++
Sbjct 75 IGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALG 134
Query 420 TFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWM 479
T FP++I TW G+ +I LVE++ + ++ + +ILP PS+ G R AL W+
Sbjct 135 TLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL 194
Query 480 ASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLGKITENYATSW 538
AE + + GIG M A++ + + V+ A +L A LG + ++ E W
Sbjct 195 TLIVAETISANS-GIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRW 252
>P40401 Putative aliphatic sulfonates transport permease protein
SsuC [Bacillus subtilis (strain 168)]
Length=276
Score = 155 bits (393), Expect = 5e-47
Identities = 82/237 (35%), Positives = 131/237 (55%), Gaps = 1/237 (0%)
Query 43 IVPVCLFALWWIASNEQWMPAQILPTPKDTWHSFVE-IASQDLWSQLAISLERFGLGLLS 101
++P + A+W + + A +LPTP +F E I S +L+ L IS+ R LG L
Sbjct 34 LLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQISIYRAALGFLL 93
Query 102 GVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKAT 161
G G+ +G+L G+S+ E YL + L +P LA PL ++W G + KI +I
Sbjct 94 GAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEVSKILLIALGA 153
Query 162 MVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTS 221
P+ ++T G+R + KL E+A +L+F ++K++LPA LP G+RL++ W
Sbjct 154 FFPVYINTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGIRLSLGIAWLG 213
Query 222 LIAVELLASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFW 278
L+ EL+ SS G+GY+++ RQ Q + VF I + A VG + D + +ERK + W
Sbjct 214 LVVAELMGSSSGVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRLLERKLLKW 270
Score = 143 bits (361), Expect = 2e-42
Identities = 78/251 (31%), Positives = 133/251 (53%), Gaps = 1/251 (0%)
Query 291 KNRTDVFKSWVLPLSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLITAMYYS 350
+ R K +LP ++ +W V ++S+ +LP P ++ I L + S
Sbjct 24 RKRYGWMKGLLLPAVIIAIWQVIGGLGVVSATVLPTPVTIVLTFKELILSGELFGHLQIS 83
Query 351 LYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDL 410
+YRA LG ++G +G +GI+ G K E L P+L LR + A PL WFG +++
Sbjct 84 IYRAALGFLLGAGLGLMIGILAGFSKRTELYLDPSLQMLRTVPHLAVTPLFILWFGFDEV 143
Query 411 SKIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGF 470
SKI+ I++ FFP++I T+ G+ + +L EV+ L Q+++ +ILP+ P++ G
Sbjct 144 SKILLIALGAFFPVYINTFNGIRGVDAKLFEVARVLEFKWHQQISKVILPAALPNILLGI 203
Query 471 RLALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLGKI 530
RL+L +W+ AE LMGS G+G +M A+Q + +V A ++ A +G + ++
Sbjct 204 RLSLGIAWLGLVVAE-LMGSSSGVGYMIMDARQFSQTNKVFAGIIIFAVVGKLTDSFVRL 262
Query 531 TENYATSWRKN 541
E WR +
Sbjct 263 LERKLLKWRNS 273
>Q47539 Taurine transport system permease protein TauC [Escherichia
coli (strain K12)]
Length=275
Score = 141 bits (355), Expect = 1e-41
Identities = 75/237 (32%), Positives = 121/237 (51%), Gaps = 6/237 (3%)
Query 48 LFALWWIASNEQWMPAQILPTPKDTWHSFVEIASQD------LWSQLAISLERFGLGLLS 101
L +WW + Q + LP P+ + IA LW LA SL R L L +
Sbjct 34 LLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALFA 93
Query 102 GVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKAT 161
VL G+ +G+ +G S L +P LA+LPL++IW GI + KI +I+ A
Sbjct 94 AVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAI 153
Query 162 MVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTS 221
P+A+ AGV+ +Q A L +R +L ++LP LP TGLR+ + GW++
Sbjct 154 FAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWST 213
Query 222 LIAVELLASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFW 278
L+A EL+A++ G+G+++ + + D+V I VIA + + + L ++R+ W
Sbjct 214 LVAAELIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPW 270
Score = 107 bits (266), Expect = 2e-29
Identities = 75/243 (31%), Positives = 118/243 (49%), Gaps = 9/243 (4%)
Query 302 LPLSLVVLWVVSSWFNLISSQILPAPWKVLEALWS-----GIQDFSLITAMYYSLYRAIL 356
L + L V W V++ LIS LP P +VLE L + G D +L + SL R +L
Sbjct 31 LAVLLTVWWTVAT-LQLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIML 89
Query 357 GLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFI 416
L L G VGI +GL + +L P + R + A++PL+ WFG+ + SKI+ I
Sbjct 90 ALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGETSKILLI 149
Query 417 SIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLY 476
+A F P+ ++ G+ S+ + + +L + Q L +ILP P + G R+ L
Sbjct 150 YLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGV 209
Query 477 SWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLG-KITENYA 535
W AE L+ + G+G +M+ + F V+ A + V + A L LG + +
Sbjct 210 GWSTLVAAE-LIAATRGLG-FMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRL 267
Query 536 TSW 538
T W
Sbjct 268 TPW 270
>Q51881 Nitrate import permease protein NrtB [Phormidium laminosum]
Length=279
Score = 125 bits (313), Expect = 1e-35
Identities = 72/244 (30%), Positives = 125/244 (51%), Gaps = 9/244 (4%)
Query 39 AIFWIVPVCLFALWWIASNEQWMPAQILPTPKDTWHSFVEI------ASQDLWSQLAISL 92
AI + V + ++ L N P Q++ +++W ++ Q L+ Q+A SL
Sbjct 34 AIAFFVLLGIWQLLCSGENAACRPIQVV---QESWDLIIDPFYRGSGTDQGLFWQIAASL 90
Query 93 ERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSL 152
+R +G L + G+ LG+L+G S + Q L F L +P LAWLP+ +
Sbjct 91 QRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLPISLAAFRDSQPA 150
Query 153 KIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLR 212
IF+IF + PI ++T GV++I +A +L+ +RL K++LPAT+PY FTGL+
Sbjct 151 AIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDYFLKVLLPATVPYIFTGLK 210
Query 213 LAVAAGWTSLIAVELLASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFILHRIE 272
+A+ W +++A E+L GIG+ + V + I + VG++ + ++ I
Sbjct 211 IAIGLSWLAIVAAEMLTGGVGIGFFIWDAYNSGSNSEVILAIIYVGLVGLLLNALVGFIA 270
Query 273 RKFV 276
+ V
Sbjct 271 SRVV 274
Score = 93.2 bits (230), Expect = 2e-24
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 11/233 (5%)
Query 302 LPLSLVVLWVVSSWFNLISSQILPA-PWKVLEALWSGI---------QDFSLITAMYYSL 351
+P ++ ++ W L S + P +V++ W I D L + SL
Sbjct 31 IPTAIAFFVLLGIWQLLCSGENAACRPIQVVQESWDLIIDPFYRGSGTDQGLFWQIAASL 90
Query 352 YRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLS 411
R +G ++ + G ++GI++G+ + L P LR + AW+P+ A F +
Sbjct 91 QRVAVGYLMAAIAGIALGILIGVSVLMFQALDPIFQVLRTVPPLAWLPISLAAFRDSQPA 150
Query 412 KIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFR 471
I I I +P+ I T G+ +IP V+ L+++ L ++LP+ P +F G +
Sbjct 151 AIFVIFITAIWPIIINTAVGVQNIPQDYNNVARVLKLSRLDYFLKVLLPATVPYIFTGLK 210
Query 472 LALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAIL 524
+A+ SW+A AE L G G+GIG ++ A + VI A + V +G +L
Sbjct 211 IAIGLSWLAIVAAEMLTG-GVGIGFFIWDAYNSGSNSEVILAIIYVGLVGLLL 262
Score = 28.1 bits (61), Expect = 0.005
Identities = 18/89 (20%), Positives = 40/89 (45%), Gaps = 6/89 (7%)
Query 290 KKNRTDVFKSWVLPLSLVVLW------VVSSWFNLISSQILPAPWKVLEALWSGIQDFSL 343
K +R D F +LP ++ ++ + SW ++++++L + +W S
Sbjct 186 KLSRLDYFLKVLLPATVPYIFTGLKIAIGLSWLAIVAAEMLTGGVGIGFFIWDAYNSGSN 245
Query 344 ITAMYYSLYRAILGLIIGGLIGASVGIVV 372
+ +Y ++GL++ L+G VV
Sbjct 246 SEVILAIIYVGLVGLLLNALVGFIASRVV 274
>Q2YJB4 Probable ABC transporter permease protein BAB2_1148 [Brucella
abortus (strain 2308)]
Length=250
Score = 120 bits (301), Expect = 2e-34
Identities = 66/221 (30%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query 63 AQILPTPKDTWHSFVEIA-SQDLWSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQ 121
A +LP P D V + + L + SL R G + GV + +G L+G+ RIA
Sbjct 30 AVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVGFLMGWYRIARS 89
Query 122 YLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLK 181
+ +IP LA +PL ++ LGI+ S KIF+IF A+ + + T GV + L
Sbjct 90 LIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATYQGVISVDRTLI 149
Query 182 EMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSEGIGYLMVTG 241
A +L T+ ++++PA++P+ G+R+ + + W +++A EL+A+ G+GY M
Sbjct 150 NAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAELIAAQSGLGYRMQQA 209
Query 242 RQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFWPHAA 282
+ + L +FV++ I +G+ D +L +R+ W A
Sbjct 210 QLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQWQERA 250
Score = 94.7 bits (234), Expect = 3e-25
Identities = 58/231 (25%), Positives = 113/231 (49%), Gaps = 3/231 (1%)
Query 312 VSSWFNLISSQ--ILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLIIGGLIGASVG 369
+ W+ L ++ +LP P VLE + + + L+ ++ SL R + G ++G + VG
Sbjct 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78
Query 370 IVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFISIATFFPMFIATW 429
++G ++ +L+ P + R+I A IPL G+++ KI I +A+F +AT+
Sbjct 79 FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATY 138
Query 430 KGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMG 489
+G+ S+ L+ + L +I+P+ P + G R+ L +W AE L+
Sbjct 139 QGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAE-LIA 197
Query 490 SGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLGKITENYATSWRK 540
+ G+G M AQ +++ + + V + LG + L + + T W++
Sbjct 198 AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQWQE 248
>Q576D9 Probable ABC transporter permease protein BruAb2_1124
[Brucella abortus biovar 1 (strain 9-941)]
Length=250
Score = 120 bits (301), Expect = 2e-34
Identities = 66/221 (30%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query 63 AQILPTPKDTWHSFVEIA-SQDLWSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQ 121
A +LP P D V + + L + SL R G + GV + +G L+G+ RIA
Sbjct 30 AVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVGFLMGWYRIARS 89
Query 122 YLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLK 181
+ +IP LA +PL ++ LGI+ S KIF+IF A+ + + T GV + L
Sbjct 90 LIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATYQGVISVDRTLI 149
Query 182 EMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSEGIGYLMVTG 241
A +L T+ ++++PA++P+ G+R+ + + W +++A EL+A+ G+GY M
Sbjct 150 NAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAELIAAQSGLGYRMQQA 209
Query 242 RQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFWPHAA 282
+ + L +FV++ I +G+ D +L +R+ W A
Sbjct 210 QLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQWQERA 250
Score = 94.7 bits (234), Expect = 3e-25
Identities = 58/231 (25%), Positives = 113/231 (49%), Gaps = 3/231 (1%)
Query 312 VSSWFNLISSQ--ILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLIIGGLIGASVG 369
+ W+ L ++ +LP P VLE + + + L+ ++ SL R + G ++G + VG
Sbjct 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78
Query 370 IVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFISIATFFPMFIATW 429
++G ++ +L+ P + R+I A IPL G+++ KI I +A+F +AT+
Sbjct 79 FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATY 138
Query 430 KGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMG 489
+G+ S+ L+ + L +I+P+ P + G R+ L +W AE L+
Sbjct 139 QGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAE-LIA 197
Query 490 SGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLGKITENYATSWRK 540
+ G+G M AQ +++ + + V + LG + L + + T W++
Sbjct 198 AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQWQE 248
>Q8YDR8 Probable ABC transporter permease protein BMEII0107 [Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094)]
Length=246
Score = 119 bits (299), Expect = 4e-34
Identities = 65/217 (30%), Positives = 114/217 (53%), Gaps = 1/217 (0%)
Query 63 AQILPTPKDTWHSFVEIA-SQDLWSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQ 121
A +LP P D V + + L + SL R G + GV + +G L+G+ RIA
Sbjct 30 AVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVGFLMGWYRIARS 89
Query 122 YLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLK 181
+ +IP LA +PL ++ LGI+ S KIF+IF A+ + + T GV + L
Sbjct 90 LIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATYQGVISVDRTLI 149
Query 182 EMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSEGIGYLMVTG 241
A +L T+ ++++PA++P+ G+R+ + + W +++A EL+A+ G+GY M
Sbjct 150 NAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAELIAAQSGLGYRMQQA 209
Query 242 RQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFW 278
+ + L +FV++ I +G+ D +L +R+ W
Sbjct 210 QLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQW 246
Score = 94.0 bits (232), Expect = 5e-25
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 3/229 (1%)
Query 312 VSSWFNLISSQ--ILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLIIGGLIGASVG 369
+ W+ L ++ +LP P VLE + + + L+ ++ SL R + G ++G + VG
Sbjct 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78
Query 370 IVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFISIATFFPMFIATW 429
++G ++ +L+ P + R+I A IPL G+++ KI I +A+F +AT+
Sbjct 79 FLMGWYRIARSLIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATY 138
Query 430 KGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMG 489
+G+ S+ L+ + L +I+P+ P + G R+ L +W AE L+
Sbjct 139 QGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAE-LIA 197
Query 490 SGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLGKITENYATSW 538
+ G+G M AQ +++ + + V + LG + L + + T W
Sbjct 198 AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQW 246
>Q8FUN2 Probable ABC transporter permease protein BRA1188/BS1330_II1179
[Brucella suis biovar 1 (strain 1330)]
Length=250
Score = 119 bits (299), Expect = 5e-34
Identities = 66/221 (30%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query 63 AQILPTPKDTWHSFVEIA-SQDLWSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQ 121
A +LP P D V + + L + SL R G + GV + +G L+G+ RIA
Sbjct 30 AVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVGFLMGWYRIARS 89
Query 122 YLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLK 181
+ +IP LA +PL ++ LGI+ S KIF+IF A+ + + T GV + L
Sbjct 90 PIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATYQGVISVDRTLI 149
Query 182 EMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASSEGIGYLMVTG 241
A +L T+ ++++PA++P+ G+R+ + + W +++A EL+A+ G+GY M
Sbjct 150 NAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAELIAAQSGLGYRMQQA 209
Query 242 RQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFWPHAA 282
+ + L +FV++ I +G+ D +L +R+ W A
Sbjct 210 QLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQWQERA 250
Score = 92.0 bits (227), Expect = 2e-24
Identities = 57/231 (25%), Positives = 112/231 (48%), Gaps = 3/231 (1%)
Query 312 VSSWFNLISSQ--ILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLIIGGLIGASVG 369
+ W+ L ++ +LP P VLE + + + L+ ++ SL R + G ++G + VG
Sbjct 19 IGGWYLLTATGAVVLPGPVDVLERAVTLLLNGQLVGDIFASLRRVLSGFVLGVALAIPVG 78
Query 370 IVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFISIATFFPMFIATW 429
++G ++ + + P + R+I A IPL G+++ KI I +A+F +AT+
Sbjct 79 FLMGWYRIARSPIEPWVQFFRMIPPLAVIPLAIVTLGIDESPKIFVIFLASFLSSVVATY 138
Query 430 KGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMG 489
+G+ S+ L+ + L +I+P+ P + G R+ L +W AE L+
Sbjct 139 QGVISVDRTLINAARVLGAKDATIFARVIVPASVPFILVGVRIGLGSAWATVVAAE-LIA 197
Query 490 SGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLGKITENYATSWRK 540
+ G+G M AQ +++ + + V + LG + L + + T W++
Sbjct 198 AQSGLGYRMQQAQLYYDLPTIFVSLVTIGILGLFMDRLLQAADRRLTQWQE 248
>Q57856 Putative ABC transporter permease protein MJ0413 [Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1
/ JCM 10045 / NBRC 100440)]
Length=267
Score = 120 bits (300), Expect = 5e-34
Identities = 77/255 (30%), Positives = 124/255 (49%), Gaps = 5/255 (2%)
Query 290 KKNRTDVFKSWVLPLSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDF----SLIT 345
K N ++ LP VV+W + + + + + ILP V+ L Q SLI
Sbjct 11 KINTKELVLKISLPALAVVIWELLAIY-INNPVILPRVEAVINVLIHPFQGILGTGSLID 69
Query 346 AMYYSLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWF 405
S+ R I G ++ + +GI++G ++ + +L + LR I AW+PL AWF
Sbjct 70 NTIISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELLRPIPPLAWVPLSLAWF 129
Query 406 GLEDLSKIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPS 465
GL ++S I I I FFP+ I T G+ +P L+E + TL L +++P+ +PS
Sbjct 130 GLGEMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAKGRDILIKVVIPASSPS 189
Query 466 MFAGFRLALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILA 525
+ G R+ +WM AE L S G+G +M A M+ VIA +++ +G +L
Sbjct 190 ILTGLRVGAGIAWMCVVAAEMLPSSNAGLGYLIMYAYSLSRMDVVIACMIIIGLIGLVLD 249
Query 526 WLGKITENYATSWRK 540
+ E+ WRK
Sbjct 250 RGLRYIEDKYFVWRK 264
Score = 119 bits (298), Expect = 9e-34
Identities = 66/190 (35%), Positives = 99/190 (52%), Gaps = 1/190 (1%)
Query 90 ISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIE 149
IS++R G L + LG+L+GY R L IP LAW+PL + W G+
Sbjct 73 ISIKRVISGFLLASAVAIPLGILMGYYRTVNSLCDTLIELLRPIPPLAWVPLSLAWFGLG 132
Query 150 NSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFT 209
IFIIF PI ++T +GV+ + L E A L +L K+V+PA+ P T
Sbjct 133 EMSMIFIIFIGAFFPILINTISGVKGVPTPLIEAALTLGAKGRDILIKVVIPASSPSILT 192
Query 210 GLRLAVAAGWTSLIAVELLASSE-GIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFIL 268
GLR+ W ++A E+L SS G+GYL++ L ++D+V + +I +G++ D L
Sbjct 193 GLRVGAGIAWMCVVAAEMLPSSNAGLGYLIMYAYSLSRMDVVIACMIIIGLIGLVLDRGL 252
Query 269 HRIERKFVFW 278
IE K+ W
Sbjct 253 RYIEDKYFVW 262
>Q5MZ55 Bicarbonate transport system permease protein CmpB [Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)]
Length=278
Score = 109 bits (273), Expect = 3e-30
Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Query 85 WSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMI 144
W +A SL R G + G+ +G+L+G +R L F L +I LAW+P+ ++
Sbjct 84 WQTIA-SLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALV 142
Query 145 WLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATL 204
IF+IF + PI ++T GVR I +A +L+ ++ L K+VLPA L
Sbjct 143 AFQQNQPAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAAL 202
Query 205 PYFFTGLRLAVAAGWTSLIAVELLASS-EGIGYLMVTGRQLFQLDIVFVTIFVIASVGII 263
PY FTGLR+A+ W ++IA E++ S GIG+ + Q + + + + I +VG++
Sbjct 203 PYIFTGLRIAIGLSWLAIIAAEIVMSGIVGIGFFIWDAYQQNYVSDIILAVIYIGAVGLL 262
Query 264 FDFILHRIER 273
D + ++R
Sbjct 263 LDRFVAWLQR 272
Score = 109 bits (272), Expect = 4e-30
Identities = 63/182 (35%), Positives = 96/182 (53%), Gaps = 4/182 (2%)
Query 350 SLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLED 409
SL R G I +IG SVGI+VGL + + +L P LR+IA AW+P+ F
Sbjct 89 SLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALVAFQQNQ 148
Query 410 LSKIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAG 469
+ I I I +P+ I T +G+ IP V+ LRM+ + L ++LP+ P +F G
Sbjct 149 PAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAALPYIFTG 208
Query 470 FRLALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAIL----A 525
R+A+ SW+A AE +M +GIG ++ A Q + +I A + + +G +L A
Sbjct 209 LRIAIGLSWLAIIAAEIVMSGIVGIGFFIWDAYQQNYVSDIILAVIYIGAVGLLLDRFVA 268
Query 526 WL 527
WL
Sbjct 269 WL 270
Score = 19.2 bits (38), Expect = 3.1
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 9/48 (19%)
Query 131 VIIPTLAWLPLLMIWLGIENSLKIFIIFKATMV--PIALHTQAGVRDI 176
+++P L L+IW +IF AT + P++L T+ R++
Sbjct 27 ILLPLAGILGFLIIW-------QIFSSSGATRLPGPLSLFTEERTREL 67
>Q55106 Bicarbonate transport system permease protein CmpB [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=278
Score = 109 bits (273), Expect = 3e-30
Identities = 61/190 (32%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Query 85 WSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMI 144
W +A SL R G + G+ +G+L+G +R L F L +I LAW+P+ ++
Sbjct 84 WQTIA-SLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALV 142
Query 145 WLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATL 204
IF+IF + PI ++T GVR I +A +L+ ++ L K+VLPA L
Sbjct 143 AFQQNQPAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAAL 202
Query 205 PYFFTGLRLAVAAGWTSLIAVELLASS-EGIGYLMVTGRQLFQLDIVFVTIFVIASVGII 263
PY FTGLR+A+ W ++IA E++ S GIG+ + Q + + + + I +VG++
Sbjct 203 PYIFTGLRIAIGLSWLAIIAAEIVMSGIVGIGFFIWDAYQQNYVSDIILAVIYIGAVGLL 262
Query 264 FDFILHRIER 273
D + ++R
Sbjct 263 LDRFVAWLQR 272
Score = 109 bits (272), Expect = 4e-30
Identities = 63/182 (35%), Positives = 96/182 (53%), Gaps = 4/182 (2%)
Query 350 SLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLED 409
SL R G I +IG SVGI+VGL + + +L P LR+IA AW+P+ F
Sbjct 89 SLTRVAQGFSIAAIIGISVGILVGLNRQLNAMLDPLFQFLRMIAPLAWVPIALVAFQQNQ 148
Query 410 LSKIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAG 469
+ I I I +P+ I T +G+ IP V+ LRM+ + L ++LP+ P +F G
Sbjct 149 PAAIFVIFITAVWPILINTAEGVRQIPQDYNNVARVLRMSKSKYLMKVVLPAALPYIFTG 208
Query 470 FRLALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAIL----A 525
R+A+ SW+A AE +M +GIG ++ A Q + +I A + + +G +L A
Sbjct 209 LRIAIGLSWLAIIAAEIVMSGIVGIGFFIWDAYQQNYVSDIILAVIYIGAVGLLLDRFVA 268
Query 526 WL 527
WL
Sbjct 269 WL 270
Score = 19.2 bits (38), Expect = 3.1
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 9/48 (19%)
Query 131 VIIPTLAWLPLLMIWLGIENSLKIFIIFKATMV--PIALHTQAGVRDI 176
+++P L L+IW +IF AT + P++L T+ R++
Sbjct 27 ILLPLAGILGFLIIW-------QIFSSSGATRLPGPLSLFTEERTREL 67
>Q57306 Probable ABC transporter permease protein HI_0355 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 /
Rd)]
Length=245
Score = 108 bits (269), Expect = 5e-30
Identities = 68/227 (30%), Positives = 106/227 (47%), Gaps = 5/227 (2%)
Query 48 LFALWWIASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGLGLLSGVLGGV 107
L +W + + P I P+P+ A LW ++L LGLL G L G+
Sbjct 15 LLMIWQMVATLGSFPHYIFPSPQAVRQQLFTHAEL-LWQHTQVTLLEICLGLLLGFLFGL 73
Query 108 FLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKATMVPIAL 167
+LL +SR L IP A PLL++W G + KI + P+
Sbjct 74 ISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPVTA 133
Query 168 HTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVEL 227
G+R+ ++A + L LL K+ LPA LP F +GLR+AV+ + E
Sbjct 134 ACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGEW 193
Query 228 LASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGII----FDFILHR 270
+ SSEG+GYLM+ Q+D++F + ++ S+ + D++LHR
Sbjct 194 VGSSEGLGYLMIHANARMQVDLMFAALLILVSISLCLYFSIDWLLHR 240
Score = 88.2 bits (217), Expect = 5e-23
Identities = 56/219 (26%), Positives = 111/219 (51%), Gaps = 3/219 (1%)
Query 306 LVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLIIGGLIG 365
L+++W + + I P+P V + L++ + T + +L LGL++G L G
Sbjct 15 LLMIWQMVATLGSFPHYIFPSPQAVRQQLFTHAELLWQHTQV--TLLEICLGLLLGFLFG 72
Query 366 ASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFISIATFFPMF 425
+++ + I +L P L + I +FA PLL WFG SKIV + +FP+
Sbjct 73 LISALLLSFSRQISAVLLPILVISQAIPVFAIAPLLVLWFGYGMASKIVMSVLIIYFPVT 132
Query 426 IATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSWMASFGAE 485
A + G+ + P ++++ T ++ L+ L + LP+ P+ +G R+A+ + + + E
Sbjct 133 AACYDGLRNTPQAWLDLAKTFNISPLRLLLKVRLPAALPAFASGLRIAVSVAPIGAVVGE 192
Query 486 YLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAIL 524
+ +GS G+G M+ A +++ + AA +++ + L
Sbjct 193 W-VGSSEGLGYLMIHANARMQVDLMFAALLILVSISLCL 230
>P38044 Nitrate import permease protein NrtB [Synechococcus elongatus
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=279
Score = 107 bits (267), Expect = 2e-29
Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 17/244 (7%)
Query 46 VCL---FALWWIAS---NEQWMPAQILPTPKDTWHSFVEI-------ASQDLWSQLAISL 92
VCL A+W + S + +P I +TW ++ S+ L Q+ ISL
Sbjct 30 VCLPIFLAIWQVISAILGQDRLPGPI-NVVANTWMPYIVEPFFDNGGTSKGLGLQILISL 88
Query 93 ERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSL 152
+R +G L G+ +G +LG S+ + L L +P LAW P+ ++ N+
Sbjct 89 QRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISLMVFQDANTS 148
Query 153 KIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLR 212
IF+IF + PI ++T G+ I +A +L+ ++ + +++P+T+PY F GLR
Sbjct 149 AIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTVPYVFAGLR 208
Query 213 LAVAAGWTSLIAVELLASSEGIGYLMVTGRQL---FQLDIVFVTIFVIASVGIIFDFILH 269
+AV W +++A E+L + GIGY + + + IF + VG+ D ++
Sbjct 209 IAVGLAWLAIVAAEMLKADGGIGYFIWDAYNAGGDGSSSQIILAIFYVGLVGLSLDRLVA 268
Query 270 RIER 273
+ R
Sbjct 269 WVGR 272
Score = 89.0 bits (219), Expect = 5e-23
Identities = 67/246 (27%), Positives = 113/246 (46%), Gaps = 21/246 (9%)
Query 302 LPLSLVVLWVVSSWFNLISSQILPAPWKVLEALW----------SGIQDFSLITAMYYSL 351
LP+ L + V+S+ ++ LP P V+ W +G L + SL
Sbjct 32 LPIFLAIWQVISA---ILGQDRLPGPINVVANTWMPYIVEPFFDNGGTSKGLGLQILISL 88
Query 352 YRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLS 411
R +G ++ G VG V+G+ K + L P + LR + AW P+ F + S
Sbjct 89 QRVAIGYLLAACTGILVGGVLGMSKFLGKGLDPVIQVLRTVPPLAWFPISLMVFQDANTS 148
Query 412 KIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFR 471
I I I +P+ I T G++ IP V+ L+++ + +++PS P +FAG R
Sbjct 149 AIFVIFITAIWPIIINTAVGINQIPDDYNNVARVLKLSKKDYILNILIPSTVPYVFAGLR 208
Query 472 LALLYSWMASFGAEYLMGSGIGIGSYMMAAQQ---NFEMERVIAATVLVA----GLGAIL 524
+A+ +W+A AE L G GIG ++ A + ++I A V L ++
Sbjct 209 IAVGLAWLAIVAAEMLKADG-GIGYFIWDAYNAGGDGSSSQIILAIFYVGLVGLSLDRLV 267
Query 525 AWLGKI 530
AW+G++
Sbjct 268 AWVGRL 273
Score = 20.8 bits (42), Expect = 1.0
Identities = 7/21 (33%), Positives = 13/21 (62%), Gaps = 0/21 (0%)
Query 415 FISIATFFPMFIATWKGMSSI 435
F+ P+F+A W+ +S+I
Sbjct 25 FLPYVVCLPIFLAIWQVISAI 45
>Q55461 Bicarbonate transport system permease protein CmpB [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=280
Score = 103 bits (256), Expect = 6e-28
Identities = 68/252 (27%), Positives = 116/252 (46%), Gaps = 22/252 (9%)
Query 288 FHKKNRTDVFKSWVLPLSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLITAM 347
F +K R D+ L ++LW + S LI LP P +LW+ + +L+
Sbjct 21 FWRKRRGDILPPIFGILGFLLLWQLISSAGLIK---LPPP----SSLWTDPRTRTLLMYP 73
Query 348 YY---------------SLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLI 392
+Y SL R G + ++G S GI+VG ++ L P LR++
Sbjct 74 FYDQGGLDKGLFWQTLASLGRVAQGYSLAAIVGISTGILVGTQPLLDKALDPIFQFLRMV 133
Query 393 AIFAWIPLLTAWFGLEDLSKIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQ 452
A AW+P+ + I I I + +P+ I T +G+ IP + V LR++ +
Sbjct 134 APLAWVPIALVALQQNQPAAIFVIFITSVWPILINTTEGVKQIPQDYINVRKVLRLSPQK 193
Query 453 RLTLLILPSIAPSMFAGFRLALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIA 512
+++PS P +F G R+A+ +W+A AE +M +GIG ++ A Q + +I
Sbjct 194 FFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGIVGIGFFIWDAYQQNYISEIIL 253
Query 513 ATVLVAGLGAIL 524
A + +G +L
Sbjct 254 AVFYIGAVGLLL 265
Score = 102 bits (255), Expect = 8e-28
Identities = 61/214 (29%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query 66 LPTPKDTW----------HSFVEIASQD---LWSQLAISLERFGLGLLSGVLGGVFLGVL 112
LP P W + F + D W LA SL R G + G+ G+L
Sbjct 54 LPPPSSLWTDPRTRTLLMYPFYDQGGLDKGLFWQTLA-SLGRVAQGYSLAAIVGISTGIL 112
Query 113 LGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKATMVPIALHTQAG 172
+G + ++ L F L ++ LAW+P+ ++ L IF+IF ++ PI ++T G
Sbjct 113 VGTQPLLDKALDPIFQFLRMVAPLAWVPIALVALQQNQPAAIFVIFITSVWPILINTTEG 172
Query 173 VRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVELLASS- 231
V+ I + +L+ + K+++P+ LPY FTGLR+A+ W ++IA E++ S
Sbjct 173 VKQIPQDYINVRKVLRLSPQKFFFKILIPSALPYIFTGLRIAIGLAWLAIIAAEIVMSGI 232
Query 232 EGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFD 265
GIG+ + Q + + + +F I +VG++ D
Sbjct 233 VGIGFFIWDAYQQNYISEIILAVFYIGAVGLLLD 266
>Q9K9G6 Formylaminopyrimidine transport permease protein ThiX
[Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125)]
Length=250
Score = 93.2 bits (230), Expect = 1e-24
Identities = 57/231 (25%), Positives = 110/231 (48%), Gaps = 1/231 (0%)
Query 48 LFALWWIASNEQWMPAQILPTPKDTWHSFVEIASQDLWSQLAISLERFGLGLLSGVLGGV 107
L +W I++ P +LP+P ++++ ++ L +L +GL ++ G+
Sbjct 17 LMVIWEISARMIGQP-YLLPSPIQIVMRTIDLSESLFFTHLPATLAIISIGLALSIVLGI 75
Query 108 FLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFIIFKATMVPIAL 167
L +L+ ++ E+ + A IP +A P+ ++W G K+ + T PI +
Sbjct 76 LLSLLMFWNERVERAVYPLLVASQTIPVIALAPIFVLWFGYSIWSKVAVTVLLTFFPITV 135
Query 168 HTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVAAGWTSLIAVEL 227
+T G++ + +E+ + + L +L +P+TLP F TGLR+AV E
Sbjct 136 NTYDGLKSTNRQYEELFYTMGATKRQLFYRLFVPSTLPSFLTGLRIAVPLAVIGAAVGEW 195
Query 228 LASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFVFW 278
L ++EG+GY F VF IF+++ +GI+ + ++E + W
Sbjct 196 LGANEGLGYFSRRMMTQFDGPGVFAPIFILSLLGILGFAAIKKLENILLPW 246
Score = 84.7 bits (208), Expect = 8e-22
Identities = 64/242 (26%), Positives = 115/242 (48%), Gaps = 13/242 (5%)
Query 304 LSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLITAMYYSLYRAILGLI-IGG 362
L L+V+W +S+ + +LP+P +++ ++ L +++++ A L +I IG
Sbjct 15 LMLMVIWEISARM-IGQPYLLPSPIQIV------MRTIDLSESLFFTHLPATLAIISIGL 67
Query 363 LIGASVGIVVGLF----KPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFISI 418
+ +GI++ L + +E + P L + I + A P+ WFG SK+ +
Sbjct 68 ALSIVLGILLSLLMFWNERVERAVYPLLVASQTIPVIALAPIFVLWFGYSIWSKVAVTVL 127
Query 419 ATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYSW 478
TFFP+ + T+ G+ S Q E+ T+ T Q L +PS PS G R+A+ +
Sbjct 128 LTFFPITVNTYDGLKSTNRQYEELFYTMGATKRQLFYRLFVPSTLPSFLTGLRIAVPLAV 187
Query 479 MASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLGAILAWLGKITENYATSW 538
+ + E+L G+ G+G + F+ V A +++ LG + K EN W
Sbjct 188 IGAAVGEWL-GANEGLGYFSRRMMTQFDGPGVFAPIFILSLLGILGFAAIKKLENILLPW 246
Query 539 RK 540
RK
Sbjct 247 RK 248
Score = 20.8 bits (42), Expect = 1.00
Identities = 23/85 (27%), Positives = 38/85 (45%), Gaps = 20/85 (24%)
Query 134 PTLAWLPLLMIWLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLT 193
PTL +L L++IW + +I + ++P + Q +R I +++ L F
Sbjct 10 PTLFFLMLMVIW-----EISARMIGQPYLLPSPI--QIVMRTI-----DLSESLFFTH-- 55
Query 194 LLTKLVLPATLPYFFTGLRLAVAAG 218
LPATL GL L++ G
Sbjct 56 ------LPATLAIISIGLALSIVLG 74
>Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monocytogenes]
Length=218
Score = 60.8 bits (146), Expect = 6e-14
Identities = 43/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (5%)
Query 85 WSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMI 144
W L ISL ++ G+ V G+LL S ++ L +P+LA L ++
Sbjct 20 WQHLFISLS----AVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIP 75
Query 145 WLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATL 204
+LG+ I +F ++PI +T GVR + L E + L+ + +P ++
Sbjct 76 FLGVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSI 135
Query 205 PYFFTGLRLAV--AAGWTSLIAVELLASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGI 262
G+RL+ W +L + + G+G + G L++ D++ + + +
Sbjct 136 SVIMAGIRLSAVYVIAWATLAS---YIGAGGLGDFIFNGLNLYRPDLILGGAIPVTILAL 192
Query 263 IFDFILHRIE 272
+ +F L ++E
Sbjct 193 VVEFALGKLE 202
Score = 53.1 bits (126), Expect = 3e-11
Identities = 38/190 (20%), Positives = 89/190 (47%), Gaps = 3/190 (2%)
Query 342 SLITAMYYSLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLL 401
+L+ + L+ ++ +I+G + GI++ + N + ++ L+ + A + +
Sbjct 14 NLLVQTWQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFI 73
Query 402 TAWFGLEDLSKIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPS 461
+ G+ L I+ + I P+ T+ G+ + L+E + MT Q + + +P+
Sbjct 74 IPFLGVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPN 133
Query 462 IAPSMFAGFRLALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLG 521
+ AG RL+ +Y + A Y+ G+G G+G ++ + + ++ + V L
Sbjct 134 SISVIMAGIRLSAVYVIAWATLASYI-GAG-GLGDFIFNGLNLYRPDLILGGAIPVTILA 191
Query 522 AILAW-LGKI 530
++ + LGK+
Sbjct 192 LVVEFALGKL 201
>G2JZ43 Carnitine transport permease protein OpuCB [Listeria monocytogenes
serotype 1/2a (strain 10403S)]
Length=218
Score = 60.8 bits (146), Expect = 6e-14
Identities = 43/190 (23%), Positives = 84/190 (44%), Gaps = 9/190 (5%)
Query 85 WSQLAISLERFGLGLLSGVLGGVFLGVLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMI 144
W L ISL ++ G+ V G+LL S ++ L +P+LA L ++
Sbjct 20 WQHLFISLS----AVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIP 75
Query 145 WLGIENSLKIFIIFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATL 204
+LG+ I +F ++PI +T GVR + L E + L+ + +P ++
Sbjct 76 FLGVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPNSI 135
Query 205 PYFFTGLRLAV--AAGWTSLIAVELLASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGI 262
G+RL+ W +L + + G+G + G L++ D++ + + +
Sbjct 136 SVIMAGIRLSAVYVIAWATLAS---YIGAGGLGDFIFNGLNLYRPDLILGGAIPVTILAL 192
Query 263 IFDFILHRIE 272
+ +F L ++E
Sbjct 193 VVEFALGKLE 202
Score = 53.1 bits (126), Expect = 3e-11
Identities = 38/190 (20%), Positives = 89/190 (47%), Gaps = 3/190 (2%)
Query 342 SLITAMYYSLYRAILGLIIGGLIGASVGIVVGLFKPIENLLAPTLNTLRLIAIFAWIPLL 401
+L+ + L+ ++ +I+G + GI++ + N + ++ L+ + A + +
Sbjct 14 NLLVQTWQHLFISLSAVILGIAVAVPTGILLTRSPKVANFVIGVVSVLQTVPSLAILAFI 73
Query 402 TAWFGLEDLSKIVFISIATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPS 461
+ G+ L I+ + I P+ T+ G+ + L+E + MT Q + + +P+
Sbjct 74 IPFLGVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVNVEIPN 133
Query 462 IAPSMFAGFRLALLYSWMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVIAATVLVAGLG 521
+ AG RL+ +Y + A Y+ G+G G+G ++ + + ++ + V L
Sbjct 134 SISVIMAGIRLSAVYVIAWATLASYI-GAG-GLGDFIFNGLNLYRPDLILGGAIPVTILA 191
Query 522 AILAW-LGKI 530
++ + LGK+
Sbjct 192 LVVEFALGKL 201
>Q8ZPK1 Osmoprotectant import permease protein OsmY [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=236
Score = 55.1 bits (131), Expect = 7e-12
Identities = 58/236 (25%), Positives = 109/236 (46%), Gaps = 22/236 (9%)
Query 301 VLPLSLVVLWVVSSWFNLISSQILPAPWKVLEALWSGIQDFSLI-TAMYYSLYRAILGLI 359
VL ++V+L +++ + I + L A + ++ L+ G + L+ T+M+++L
Sbjct 9 VLGFTIVILLLLALFIWGIGLETLKA--RQVDLLYLGQRHLMLVFTSMFFAL-------- 58
Query 360 IGGLIGASVGIVVG--LFKPIENLLAPTLNTLRLIAIFAWIPLLTAWFGLEDLSKIVFIS 417
L+G GI++ K + N + A + L G+ D IV +
Sbjct 59 ---LVGIPSGILLSRPAAKGFAEYVMQIFNVGNTLPPLAVLALAMVIIGIGDTPAIVALF 115
Query 418 IATFFPMFIATWKGMSSIPMQLVEVSSTLRMTLLQRLTLLILPSIAPSMFAGFRLALLYS 477
+A+ P+ T+ G+ S+P L+E ++ + MT QRL + LP+ P M +G R+A +
Sbjct 116 LASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATAIN 175
Query 478 WMASFGAEYLMGSGIGIGSYMMAAQQNFEMERVI---AATVLVA-GLGAILAWLGK 529
+ + +L+G+ G + + +I AT L A L +LAW G+
Sbjct 176 -VGTAPLAFLIGAS-SYGELIFPGIYLNDFPTLILGATATALFALILDTLLAWFGR 229
Score = 55.1 bits (131), Expect = 7e-12
Identities = 51/191 (27%), Positives = 85/191 (45%), Gaps = 15/191 (8%)
Query 99 LLSGVLGGVFLG--VLLGYSRIAEQYLSATFYALVIIPTLAWLPLLMIWLGIENSLKIFI 156
LL G+ G+ L G++ +Y+ F +P LA L L M+ +GI ++ I
Sbjct 58 LLVGIPSGILLSRPAAKGFA----EYVMQIFNVGNTLPPLAVLALAMVIIGIGDTPAIVA 113
Query 157 IFKATMVPIALHTQAGVRDIQPKLKEMAAILQFNRLTLLTKLVLPATLPYFFTGLRLAVA 216
+F A+++PI +T AG+ + L E A + + L ++ LP P +G+R+A A
Sbjct 114 LFLASLLPIVRNTYAGLCSVPASLIEAANGIGMTKWQRLRQVELPNAWPVMLSGIRIATA 173
Query 217 AGWTSLIAVELLASSEGIGYLMVTGRQLFQLDIVFVTIFVIASVGIIFDFILHRIERKFV 276
+ L + G L+ G L F T+ + A+ +F IL + +
Sbjct 174 IN-VGTAPLAFLIGASSYGELIFPGIYLND----FPTLILGATATALFALILDTL----L 224
Query 277 FWPHAALSAHT 287
W LS HT
Sbjct 225 AWFGRRLSPHT 235
Score = 21.6 bits (44), Expect = 0.56
Identities = 20/67 (30%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query 211 LRLAVAAGWTSLIAVELLASSEGIGYLMVTGRQLF-------QLDIVFVTIFVIASVGII 263
L L G+T +I + L GIG + RQ+ L +VF ++F VGI
Sbjct 4 LTLKRVLGFTIVILLLLALFIWGIGLETLKARQVDLLYLGQRHLMLVFTSMFFALLVGIP 63
Query 264 FDFILHR 270
+L R
Sbjct 64 SGILLSR 70
Lambda K H a alpha
0.329 0.141 0.445 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1851708
Database: 6d9acb8992b61eedd3648084094ef70b.SwissProt.fasta
Posted date: May 30, 2024 3:55 PM
Number of letters in database: 4,638
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
