BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4fa352282f66a1b9d5953d095e222a1f.SwissProt.fasta
4 sequences; 446 total letters
Query= ACIAD1710
Length=135
Score E
Sequences producing significant alignments: (Bits) Value
P20370 4-carboxymuconolactone decarboxylase [Acinetobacter baylyi... 275 1e-101
P00881 4-carboxymuconolactone decarboxylase [Pseudomonas putida] 58.5 3e-17
P29911 Uncharacterized 13.8 kDa protein in nqo9-nqo10 intergenic ... 55.8 2e-15
P29912 Uncharacterized 15.0 kDa protein in nqo9-nqo10 intergenic ... 54.3 1e-14
>P20370 4-carboxymuconolactone decarboxylase [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=134
Score = 275 bits (702), Expect = 1e-101
Identities = 134/134 (100%), Positives = 134/134 (100%), Gaps = 0/134 (0%)
Query 1 MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTR 60
MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTR
Sbjct 1 MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTR 60
Query 61 SLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEV 120
SLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEV
Sbjct 61 SLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEV 120
Query 121 FKDLGIAPEKVNKD 134
FKDLGIAPEKVNKD
Sbjct 121 FKDLGIAPEKVNKD 134
>P00881 4-carboxymuconolactone decarboxylase [Pseudomonas putida]
Length=48
Score = 58.5 bits (140), Expect = 3e-17
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 0/48 (0%)
Query 1 MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGE 48
M+++QRY G++VR VLG+ HV+R LE LNDFN +FQ I+R A G+
Sbjct 1 MDEKQRYDAGMQVRRAVLGDAHVDRCLEKLNDFNGEFQEMITRHACGD 48
>P29911 Uncharacterized 13.8 kDa protein in nqo9-nqo10 intergenic
region [Paracoccus denitrificans]
Length=130
Score = 55.8 bits (133), Expect = 2e-15
Identities = 31/84 (37%), Positives = 50/84 (60%), Gaps = 2/84 (2%)
Query 47 GEVWSRPGLPRHTRSLVTIAVLLALGRED--ELRMHLRACFNNGVTKDELKELILHCSLY 104
GEV++R GL TR LVT+ L A+G + +L++++ + G + E+ E I LY
Sbjct 47 GEVYAREGLDLKTRLLVTVGALAAMGGQTRPQLKVNVASALRAGASAREICEAIFQMHLY 106
Query 105 AGLPASNAAMHMAEEVFKDLGIAP 128
G+PA+ A++ A EVF+ G +P
Sbjct 107 GGMPAAINALNAAIEVFEAEGTSP 130
>P29912 Uncharacterized 15.0 kDa protein in nqo9-nqo10 intergenic
region [Paracoccus denitrificans]
Length=134
Score = 54.3 bits (129), Expect = 1e-14
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (3%)
Query 46 WGEVWSRPGLPRHTRSLVTIAVLLALGR--EDELRMHLRACFNNGVTKDELKELILHCSL 103
+G+ ++R GL TR L+TI + G E +LRM +R G TK E+ E I S+
Sbjct 51 FGKTFNREGLDAKTRLLLTIGAITVQGALAEPQLRMTVRQALAAGATKREIAETIFQMSM 110
Query 104 YAGLPASNAAMHMAEEVFKD 123
+ GLPA A+ +A+ V+ +
Sbjct 111 FGGLPAMQKALEIAQSVYAE 130
Lambda K H a alpha
0.324 0.138 0.418 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 40454
Database: 4fa352282f66a1b9d5953d095e222a1f.SwissProt.fasta
Posted date: May 20, 2024 2:30 AM
Number of letters in database: 446
Number of sequences in database: 4
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
