BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 72d1e97ed95883ac917e8bfcfa6aaa34.SwissProt.fasta
8 sequences; 4,049 total letters
Query= ACIAD1750
Length=476
Score E
Sequences producing significant alignments: (Bits) Value
P94364 Cytochrome bd ubiquinol oxidase subunit 1 [Bacillus subtil... 308 1e-103
P26459 Cytochrome bd-II ubiquinol oxidase subunit 1 [Escherichia ... 276 6e-91
P45021 Probable cytochrome oxidase subunit 1 [Haemophilus influen... 239 2e-76
P0ABK1 Cytochrome bd-I ubiquinol oxidase subunit 1 [Shigella flex... 233 5e-74
P0ABK0 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia c... 233 5e-74
P0ABJ9 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia c... 233 5e-74
Q09049 Cytochrome bd ubiquinol oxidase subunit 1 [Azotobacter vin... 224 1e-70
C0SP90 Putative cytochrome bd menaquinol oxidase subunit I [Bacil... 213 2e-67
>P94364 Cytochrome bd ubiquinol oxidase subunit 1 [Bacillus subtilis
(strain 168)]
Length=468
Score = 308 bits (788), Expect = 1e-103
Identities = 169/446 (38%), Positives = 257/446 (58%), Gaps = 13/446 (3%)
Query 5 LTALELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAV 64
++ L LARIQFA T FH +F +SIGL +A++E +L N +Y + KFW +F +
Sbjct 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLI 60
Query 65 AFGMGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRV 124
F +GVV+G++ +QFG NWS++SRF G V G L+ E L AFF+E+ F+G+ +FGW R+
Sbjct 61 NFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRL 120
Query 125 GKKAHFFATLMVAVGTCISMFWILSSNSWMQTPQGFTIENGIIVPQDWFAIVFNPSFPYR 184
KK H +V+ GT +S FWIL++NS+MQ P GFTI+NG D+ A++ NP
Sbjct 121 PKKIHALCIWLVSFGTIMSSFWILTANSFMQEPVGFTIKNGRAEMNDFGALITNPQLWVE 180
Query 185 LAHMAIAAFMVSSLLVAATAAWHLLKGRRDDLVKKSFSMALWLILILAPLQV-FVGDAHG 243
H+ A + +A +A+ LLK + K+SF +A+ ++ + A L V G
Sbjct 181 FPHVIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAM-IVGLCAGLGVGLSGHMQA 239
Query 244 LNTLEHQPAKLAAMEGHWETNHDHAMPLYLFGIPDMQEERTKYAIAIPHLGSLILTHSMN 303
+ +E QP K+AA EG WE + D A F D + E++ I +P+ S + +
Sbjct 240 EHLMESQPMKMAASEGLWEDSGDPA-AWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFS 298
Query 304 GTVKGLKDFAPEDR---------PNSTIVFWSFRVMVGLGMLMVLLALAGLLLRKSGKLY 354
G+VKG+K E P FWSFR+MVG G++M+L AL GL L + KL
Sbjct 299 GSVKGMKTLQAEYEKIYGKGDYIPPVKTTFWSFRIMVGAGVVMILAALGGLWLNRRKKLE 358
Query 355 ENKWFQRFALFMGPSGFIALLAGWFTTEVGRQPWVVYGVMRTKDALSP-VSAEQVGLTLI 413
+KW+ R + + F+A AGW TE+GRQPW V G+M T ++SP V+A + ++I
Sbjct 359 NSKWYLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFSII 418
Query 414 IFVLVYFVVFGIGIYYMLKLINKGPE 439
F ++Y ++ + ++ ++ I KG E
Sbjct 419 AFGVMYMILGALLVFLFIREIKKGAE 444
>P26459 Cytochrome bd-II ubiquinol oxidase subunit 1 [Escherichia
coli (strain K12)]
Length=514
Score = 276 bits (707), Expect = 6e-91
Identities = 164/513 (32%), Positives = 262/513 (51%), Gaps = 73/513 (14%)
Query 8 LELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAVAFG 67
++L+R QFA T +H +F +++GL LA++E ++ TG +Y+D+ +FW K+F + F
Sbjct 5 IDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFA 64
Query 68 MGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRVGKK 127
+GV +G+ M +QFGTNWS +S + G + G L+ E L AFFLE+ F+G+ FGW R+ K
Sbjct 65 LGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKY 124
Query 128 AHFFATLMVAVGTCISMFWILSSNSWMQTPQG--FTIENGIIVPQDWFAIVFNPSFPYRL 185
H T +VA G+ +S WIL++N WMQ P G F I+ + + +VFNP +
Sbjct 125 QHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKF 184
Query 186 AHMAIAAFMVSSLLVAATAAWHLLKGRRDDLVKKSFSM--ALWLILILAPLQVFVGDAHG 243
H +A ++ ++ + A +AW+LL+GR ++ +SF++ + I+ LQ +GD+
Sbjct 185 VHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQ--LGDSSA 242
Query 244 LNTLEHQPAKLAAMEGHWETNHDHAMPLYLFGIPDMQEERTKYAIAIPHLGSLILTHSMN 303
+ QP KLAAMEG W+T A P ++ P+ +ER +A+ IP L ++ THS++
Sbjct 243 YEVAQVQPVKLAAMEGEWQTEPAPA-PFHVVAWPEQDQERNAFALKIPALLGILATHSLD 301
Query 304 GTVKGLKDFAPEDRP-------------------NSTIVFWSFRVM---VGLGMLM---- 337
V GLK+ E P V +FR + +G GML+
Sbjct 302 KPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYA 361
Query 338 ------------------------------VLLALAGLLL---------RKSGKLYENKW 358
+++ LLL GK+ +++W
Sbjct 362 PDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW 421
Query 359 FQRFALFMGPSGFIALLAGWFTTEVGRQPWVVYGVMRTKDALSPVSAEQVGLTLIIFVLV 418
+ AL+ P +IA+ AGWF TE GRQPW + ++ T A S ++ Q+ +LI+ V +
Sbjct 422 VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGL 481
Query 419 YFVVFGIGIYYMLKLINKGPEFIHS-QPEQVGG 450
Y + +Y M K GP + S QP Q G
Sbjct 482 YTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG 514
>P45021 Probable cytochrome oxidase subunit 1 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=521
Score = 239 bits (609), Expect = 2e-76
Identities = 150/505 (30%), Positives = 237/505 (47%), Gaps = 71/505 (14%)
Query 5 LTALELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAV 64
L ++L+R+QFA T +H IF +++GL+ L ++E ++ TG VY+D+ KFW K+F +
Sbjct 2 LDVVDLSRLQFALTALYHFIFVPLTLGLSFILVIMETIYVATGKEVYKDMTKFWGKLFGI 61
Query 65 AFGMGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRV 124
F +GV +G++M +QFGTNWS +S + G + G L+ E L AFFLE+ F+G+ FGW R+
Sbjct 62 NFALGVTTGIIMEFQFGTNWSYYSHYVGDIFGAPLAIEALLAFFLESTFVGLFFFGWDRL 121
Query 125 GKKAHFFATLMVAVGTCISMFWILSSNSWMQTPQG--FTIENGIIVPQDWFAIVFNPSFP 182
K H AT VA G+ +S WIL +N WMQ P G F E + ++ + NP
Sbjct 122 SKGKHLLATYCVAFGSNLSAMWILVANGWMQAPTGSEFNFETVRMEMTNFLDLWLNPVAQ 181
Query 183 YRLAHMAIAAFMVSSLLVAATAAWHLLKGRRDDLVKKSFSMALWLILILAPLQVFVGDAH 242
+ H A ++ + V A +++ LLKGR + K+SFS+A I + + +GD
Sbjct 182 SKFLHTLSAGYVTGAFFVLAISSYFLLKGRDFEFAKRSFSVAATFGFIASISVLILGDES 241
Query 243 GLNTLEHQPAKLAAMEGHW------------------ETNHDHAMPL------------- 271
G + + QP KLAAME + E +D A+ +
Sbjct 242 GYDIGKAQPVKLAAMEAEFETHPAPAPFLPVAIPNTAEMKNDFAIEIPYLGGVIATRSID 301
Query 272 -YLFGIPDMQ---EERTKYAIAIPHL-------------------------------GSL 296
+ G+ D+Q E R + I L G L
Sbjct 302 KEIIGLKDLQALNETRVRSGIRAYELFTQLRAEKKANGQVNEETKAQFNEVKKDLGFGLL 361
Query 297 ILTHSMN---GTVKGLKDFAPEDRPNSTIVFWSFRVMVGLGMLMVLLALAGLLLRKSGKL 353
+ ++ N T + +K A + PN FW+FR M+ G L+ LL + K+
Sbjct 362 LKRYTNNVVDATEEQIKQAARDTIPNVGPNFWAFRAMIAAGGLIALLTFGAFVQNLRNKV 421
Query 354 YENKWFQRFALFMGPSGFIALLAGWFTTEVGRQPWVVYGVMRTKDALSPVSAEQVGLTLI 413
+ + L+ P +IA+ GWF E GRQPW Y ++ + S +S + ++
Sbjct 422 TQIPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWATYEILPVGVSASNLSTGDLWFSIG 481
Query 414 IFVLVYFVVFGIGIYYMLKLINKGP 438
+ +Y + +Y M K GP
Sbjct 482 LICALYLAFIIVEMYLMFKYARLGP 506
>P0ABK1 Cytochrome bd-I ubiquinol oxidase subunit 1 [Shigella
flexneri]
Length=522
Score = 233 bits (593), Expect = 5e-74
Identities = 117/309 (38%), Positives = 181/309 (59%), Gaps = 3/309 (1%)
Query 5 LTALELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAV 64
L +EL+R+QFA T +H +F +++G+A LA++E ++ +G +Y+D+ KFW K+F +
Sbjct 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61
Query 65 AFGMGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRV 124
F +GV +G+ M +QFGTNWS +S + G + G L+ E L AFFLE+ F+G+ FGW R+
Sbjct 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121
Query 125 GKKAHFFATLMVAVGTCISMFWILSSNSWMQTP--QGFTIENGIIVPQDWFAIVFNPSFP 182
GK H T +VA+G+ +S WIL +N WMQ P F E + + +V NP
Sbjct 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181
Query 183 YRLAHMAIAAFMVSSLLVAATAAWHLLKGRRDDLVKKSFSMALWLILILAPLQVFVGDAH 242
+ H + ++ ++ + +AW++LKGR K+SF++A + + +GD
Sbjct 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241
Query 243 GLNTLEHQPAKLAAMEGHWETNHDHAMPLYLFGIPDMQEERTKYAIAIPHLGSLILTHSM 302
G + Q KLAA+E WET A LFGIPD +EE K+AI IP+ +I T S+
Sbjct 242 GYEMGDVQKTKLAAIEAEWETQPAPA-AFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300
Query 303 NGTVKGLKD 311
+ V GLK+
Sbjct 301 DTPVIGLKE 309
>P0ABK0 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=522
Score = 233 bits (593), Expect = 5e-74
Identities = 117/309 (38%), Positives = 181/309 (59%), Gaps = 3/309 (1%)
Query 5 LTALELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAV 64
L +EL+R+QFA T +H +F +++G+A LA++E ++ +G +Y+D+ KFW K+F +
Sbjct 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61
Query 65 AFGMGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRV 124
F +GV +G+ M +QFGTNWS +S + G + G L+ E L AFFLE+ F+G+ FGW R+
Sbjct 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121
Query 125 GKKAHFFATLMVAVGTCISMFWILSSNSWMQTP--QGFTIENGIIVPQDWFAIVFNPSFP 182
GK H T +VA+G+ +S WIL +N WMQ P F E + + +V NP
Sbjct 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181
Query 183 YRLAHMAIAAFMVSSLLVAATAAWHLLKGRRDDLVKKSFSMALWLILILAPLQVFVGDAH 242
+ H + ++ ++ + +AW++LKGR K+SF++A + + +GD
Sbjct 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241
Query 243 GLNTLEHQPAKLAAMEGHWETNHDHAMPLYLFGIPDMQEERTKYAIAIPHLGSLILTHSM 302
G + Q KLAA+E WET A LFGIPD +EE K+AI IP+ +I T S+
Sbjct 242 GYEMGDVQKTKLAAIEAEWETQPAPA-AFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300
Query 303 NGTVKGLKD 311
+ V GLK+
Sbjct 301 DTPVIGLKE 309
>P0ABJ9 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia
coli (strain K12)]
Length=522
Score = 233 bits (593), Expect = 5e-74
Identities = 117/309 (38%), Positives = 181/309 (59%), Gaps = 3/309 (1%)
Query 5 LTALELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAV 64
L +EL+R+QFA T +H +F +++G+A LA++E ++ +G +Y+D+ KFW K+F +
Sbjct 2 LDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGI 61
Query 65 AFGMGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRV 124
F +GV +G+ M +QFGTNWS +S + G + G L+ E L AFFLE+ F+G+ FGW R+
Sbjct 62 NFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRL 121
Query 125 GKKAHFFATLMVAVGTCISMFWILSSNSWMQTP--QGFTIENGIIVPQDWFAIVFNPSFP 182
GK H T +VA+G+ +S WIL +N WMQ P F E + + +V NP
Sbjct 122 GKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQ 181
Query 183 YRLAHMAIAAFMVSSLLVAATAAWHLLKGRRDDLVKKSFSMALWLILILAPLQVFVGDAH 242
+ H + ++ ++ + +AW++LKGR K+SF++A + + +GD
Sbjct 182 VKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDES 241
Query 243 GLNTLEHQPAKLAAMEGHWETNHDHAMPLYLFGIPDMQEERTKYAIAIPHLGSLILTHSM 302
G + Q KLAA+E WET A LFGIPD +EE K+AI IP+ +I T S+
Sbjct 242 GYEMGDVQKTKLAAIEAEWETQPAPA-AFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300
Query 303 NGTVKGLKD 311
+ V GLK+
Sbjct 301 DTPVIGLKE 309
>Q09049 Cytochrome bd ubiquinol oxidase subunit 1 [Azotobacter
vinelandii]
Length=537
Score = 224 bits (571), Expect = 1e-70
Identities = 113/308 (37%), Positives = 183/308 (59%), Gaps = 3/308 (1%)
Query 6 TALELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAVA 65
+ ++L+R+QFA T +H +F +++G+ LA++E ++ TG VY+D+ KFW K+F +
Sbjct 5 SVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKLFGIN 64
Query 66 FGMGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRVG 125
F +GV +G+ M +QFGTNW+ +S + G + G L+ E L+AFFLE+ F+G+ FGW R+
Sbjct 65 FALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGWDRLS 124
Query 126 KKAHFFATLMVAVGTCISMFWILSSNSWMQTPQG--FTIENGIIVPQDWFAIVFNPSFPY 183
K H T +VA+G+ +S WIL +N WMQ P G F E + D+ A++ NP
Sbjct 125 KIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNPVAQV 184
Query 184 RLAHMAIAAFMVSSLLVAATAAWHLLKGRRDDLVKKSFSMALWLILILAPLQVFVGDAHG 243
+ H + ++ ++ V A ++++LLK R ++SF++A + + +GD G
Sbjct 185 KFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLGDESG 244
Query 244 LNTLEHQPAKLAAMEGHWETNHDHAMPLYLFGIPDMQEERTKYAIAIPHLGSLILTHSMN 303
E Q AKLAA+E WET H L G P+ +E+RT +A+ IP + +I T S++
Sbjct 245 YEVGEVQKAKLAAIEAEWET-HPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATRSLD 303
Query 304 GTVKGLKD 311
V G+KD
Sbjct 304 EQVIGIKD 311
Score = 85.5 bits (210), Expect = 3e-21
Identities = 43/135 (32%), Positives = 68/135 (50%), Gaps = 0/135 (0%)
Query 309 LKDFAPEDRPNSTIVFWSFRVMVGLGMLMVLLALAGLLLRKSGKLYENKWFQRFALFMGP 368
+K A + P+ +FWSFR MVG G M++L + W +FAL+ P
Sbjct 374 IKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEESKPWLLKFALYSLP 433
Query 369 SGFIALLAGWFTTEVGRQPWVVYGVMRTKDALSPVSAEQVGLTLIIFVLVYFVVFGIGIY 428
+IA GWF E GRQPW + GV+ T + S +S + +LI + Y ++ + +Y
Sbjct 434 LPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIALIAFYTLLLVVEMY 493
Query 429 YMLKLINKGPEFIHS 443
M++ GP +H+
Sbjct 494 LMIRFARLGPSSLHT 508
Score = 18.1 bits (35), Expect = 5.9
Identities = 12/52 (23%), Positives = 18/52 (35%), Gaps = 3/52 (6%)
Query 111 AGFLGIMLFG---WGRVGKKAHFFATLMVAVGTCISMFWILSSNSWMQTPQG 159
AGF ++LF W K L+ + + WI + W G
Sbjct 398 AGFAMLILFVCAFWASARKNEESKPWLLKFALYSLPLPWIATQTGWFVAEHG 449
>C0SP90 Putative cytochrome bd menaquinol oxidase subunit I [Bacillus
subtilis (strain 168)]
Length=443
Score = 213 bits (542), Expect = 2e-67
Identities = 142/436 (33%), Positives = 212/436 (49%), Gaps = 11/436 (3%)
Query 8 LELARIQFAFTVSFHIIFPAISIGLASFLAVLEWRWLHTGNPVYQDLFKFWVKIFAVAFG 67
L LAR F T+ FHIIF + +GL + V E + T + Y + K W K AV G
Sbjct 4 LVLARSLFGTTMGFHIIFATLGVGLPLMILVAELIYQKTKDDHYAIMAKRWTKAQAVLLG 63
Query 68 MGVVSGVVMSYQFGTNWSEFSRFAGGVTGPLLSYEVLSAFFLEAGFLGIMLFGWGRVGKK 127
+ + +G + Q W F G V E+ AFF+EA F+ I ++ R+
Sbjct 64 VAIPTGTIAGTQLALLWPGFMEVIGRVMSLPFQIEIY-AFFVEALFMSIYVYAADRLSPA 122
Query 128 AHFFATLMVAVGTCISMFWILSSNSWMQTPQGFTIENGIIVPQDWFAIVFNPSFPYRLAH 187
A V VG S I + +++ TP GF I NG I D +A FNPSF H
Sbjct 123 MRIVAVFFVLVGAAASAVLITNVHAFEGTPAGFKILNGKITDVDPWAAFFNPSFFITAGH 182
Query 188 MAIAAFMVSSLLVAATAAWHLLKGRRDDLV----KKSFSMALWLILILAPLQVFVGDAHG 243
+ ++AFM + +VA+ AA+ +++ R+ + V +K+ +AL + I + L G
Sbjct 183 VVLSAFMTGAFIVASVAAYKMIRTRKKERVYRFHRKALLLALTIGGIFSLLTALNGHESA 242
Query 244 LNTLEHQPAKLAAMEGHWETNHDHAMPLYLFGIPDMQEERTKYAIAIPHLGSLILTHSMN 303
E+QP KLA EG +ET HA PL + G D EE+ K+AI IP S + + +
Sbjct 243 QMLYEYQPEKLAGAEGLFET-RSHA-PLAIGGFTDPNEEKVKWAIEIPWALSFLAANRFD 300
Query 304 GTVKGLKDFAPEDRPNSTIVFWSFRVMVGLGMLMVLLALAGLLLRKSGKLYE-NKWFQRF 362
VKGL F P D + F MVG+GML++L ++ G++ RK K W
Sbjct 301 TVVKGLNAF-PRDEWPPLFIHTLFNAMVGVGMLLILYSIIGVVWRKVLKKDRFPTWLLII 359
Query 363 ALFMGPSGFIALLAGWFTTEVGRQPWVVYGVMRTKDALSPVSAEQVGLTLIIFVLVYFVV 422
+ GP I + GW GRQPWV+Y +++T D ++ + +G+ + F VY V+
Sbjct 360 FMTAGPFSLIGIEFGWIFACTGRQPWVIYHLLKTSDVVTTTGS--IGVLFLFFTFVYAVL 417
Query 423 FGIGIYYMLKLINKGP 438
+Y +L K P
Sbjct 418 GAAVVYVLLYYFRKHP 433
Score = 20.0 bits (40), Expect = 1.5
Identities = 26/105 (25%), Positives = 47/105 (45%), Gaps = 28/105 (27%)
Query 293 LGSLILTHSMNGTVKGLKDFAPEDRPNSTIVFWSFRVMVGLGMLMVLLALAGLLLRKSG- 351
+ L+L S+ GT G I+F +G+G+ +++L +A L+ +K+
Sbjct 1 MDDLVLARSLFGTTMGFH-----------IIF----ATLGVGLPLMIL-VAELIYQKTKD 44
Query 352 ---KLYENKWFQRFALFMG---PSGFI-----ALLAGWFTTEVGR 385
+ +W + A+ +G P+G I ALL F +GR
Sbjct 45 DHYAIMAKRWTKAQAVLLGVAIPTGTIAGTQLALLWPGFMEVIGR 89
Lambda K H a alpha
0.329 0.142 0.453 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1568620
Database: 72d1e97ed95883ac917e8bfcfa6aaa34.SwissProt.fasta
Posted date: May 9, 2024 4:33 PM
Number of letters in database: 4,049
Number of sequences in database: 8
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
