BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3ea96cb504c7e99c7327efe9f8e88e80.SwissProt.fasta
1 sequences; 554 total letters
Query= ACIAD1753
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
O06924 Acetyl-S-ACP:malonate ACP transferase [Malonomonas rubra] 613 0.0
>O06924 Acetyl-S-ACP:malonate ACP transferase [Malonomonas rubra]
Length=554
Score = 613 bits (1582), Expect = 0.0
Identities = 302/555 (54%), Positives = 400/555 (72%), Gaps = 6/555 (1%)
Query 8 KERLWTTRRQSKQLKLEMAQK-YSDGVVIPTQDIIKVLEILITPGDRVVLEGNNQKQADF 66
KE++W + ++ A + +SD V+P+Q+ + +LE +I GDR+ LEGNNQKQADF
Sbjct 3 KEKVWDKLSTDTEERMNAANELFSDRKVVPSQNGVALLEAVIRAGDRINLEGNNQKQADF 62
Query 67 LSRSLAKTNPEILHDLHMIMPSVGRPEHLDLFEHGIARKLDFSFAGTQSLRISQLLEDGL 126
L+ L + E +++LHM+ +V P HLD+F+ GIA+KLDF++ G + ++++ L +G
Sbjct 63 LAECLGSCDSEKINNLHMVQSAVPLPIHLDIFDKGIAKKLDFAYGGPMAAKVAEFLREGK 122
Query 127 LEIGAIHTYIELYSRLLVDLIPNVVLSAGFMADRQGNIYTGPSTEDSPALIEPAAFSDGI 186
LE+GAIHTY+EL++R +DL P V L + D+ GN+YTG +TED+P + E F GI
Sbjct 123 LELGAIHTYLELFARYFMDLTPRVSLICAYEGDKDGNLYTGFNTEDTPVIAEATKFRQGI 182
Query 187 VIVQVNELVDDVTDLPRVDIPSSWVDFVVVADQPFYIEPLFTRDPKHIKPVHVLMAMMAI 246
VI QVN+LVD V RVDIP WVD V+ + +PFY+EPLFTRDP +I VLM MMA+
Sbjct 183 VIAQVNKLVDKVQ---RVDIPGEWVDAVIESPKPFYLEPLFTRDPANITDTQVLMGMMAL 239
Query 247 RGIYEKHQVQSLNHGIGFNTAAIELILPIYGESLGLKGKICRNWTLNPHPTLIPAIETGW 306
+GIY ++ VQ LNHGIGF TAAIEL+LP YG LGLKGKIC+++ LNPHPT+IPAIE GW
Sbjct 240 KGIYGEYGVQRLNHGIGFFTAAIELLLPTYGNELGLKGKICKHFALNPHPTMIPAIEDGW 299
Query 307 VESVHCFGTELGMEKYIAARPDVFFTGRDGSLRSNRMMCQLAGQYAVDLFIGATLQVDGD 366
VES+H FG ELGM+KY ARPD+FF G DGS+RSNR Q AG YA D+FIG TLQ+D
Sbjct 300 VESIHSFGGELGMQKYCEARPDIFFIGPDGSMRSNRAYSQTAGHYATDMFIGGTLQIDKY 359
Query 367 GHSSTVTKGRLAGFGGAPNMGHDPRGRRHATPAWMDMRIAGNTETDTY--LARGKKLVVQ 424
G+SST T R+AGFGGAPNMG D +GRRH T +W+ + + RGK+LVVQ
Sbjct 360 GNSSTATASRVAGFGGAPNMGCDAKGRRHVTDSWLKCGAEFEDQAALLGDMPRGKRLVVQ 419
Query 425 MVETYQEGGKPTFVKTLDAVDVAKKAGMALAPIMVYGDDVTHLLTEEGIAYLYKARSLEE 484
M ET++E P+FV+ LDA ++AK A + LAP+M+Y DD+TH++TEEGIAYL K R LEE
Sbjct 420 MQETFKEKMDPSFVEKLDAWNLAKNANLDLAPVMIYSDDLTHIVTEEGIAYLAKCRGLEE 479
Query 485 RRDMIAAVAGVTDIGLNHDPKKTQKLRQEGLVVFPEDLGIRRTDATRELLAAKNIADLVT 544
R I VAG T++GL+ DPK+T+ LR+ G+V PEDLGI R+ A R +LAAK++ DLV
Sbjct 480 RMAAIRGVAGYTEVGLSADPKETKTLRERGIVKTPEDLGIDRSRANRSMLAAKSVKDLVD 539
Query 545 WSDGLYQPPAKFRSW 559
S GLY+PPA+F +W
Sbjct 540 CSGGLYEPPARFVNW 554
Lambda K H a alpha
0.321 0.138 0.412 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 271432
Database: 3ea96cb504c7e99c7327efe9f8e88e80.SwissProt.fasta
Posted date: May 9, 2024 4:40 AM
Number of letters in database: 554
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40