BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: d25ba3deecb20a6aee56c57ad17d1a45.SwissProt.fasta
           1 sequences; 719 total letters



Query= ACIAD1761

Length=256
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q163V9 Phosphoribosylformylglycinamidine synthase subunit PurL [R...  36.6    7e-07


>Q163V9 Phosphoribosylformylglycinamidine synthase subunit PurL 
[Roseobacter denitrificans (strain ATCC 33942 / OCh 114)]
Length=719

 Score = 36.6 bits (83),  Expect = 7e-07
 Identities = 35/123 (28%), Positives = 49/123 (40%), Gaps = 15/123 (12%)

Query  134  DAVSITTIGAGAVTYIVGPVTGAAIGASSDVMALSIATGLVKA-----------ICVMVS  182
            D V I  IGAG V  + G  T  A+  +SDV    +    V+            +  + +
Sbjct  425  DTVRIPGIGAGIVR-VHG--TDKALAFTSDVTPRYVQANPVEGGKQAVAEAYRNLSAVGA  481

Query  183  TPM-TAKFMGLDNPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALTATFHTGLGCLMG  241
            TP+ T   M   NP    I G   G + G+SA +AA D  +V           G   L  
Sbjct  482  TPLATTDNMNFGNPEKPEIMGQFVGAIKGISAAVAALDMPIVSGNVSLYNETDGTAILPT  541

Query  242  PTV  244
            PT+
Sbjct  542  PTI  544


 Score = 17.7 bits (34),  Expect = 0.70
 Identities = 16/70 (23%), Positives = 30/70 (43%), Gaps = 21/70 (30%)

Query  150  VGPVTGAAIGASSDVMALSIATGLVKAICVMVSTPMTA----KFMGLDNPRSAMIFGGLA  205
            + P  GAA G            G+++ +  M + P+ A     F  + +P++  +     
Sbjct  99   IEPYQGAATGVG----------GILRDVFTMGARPIAAMNSLSFGEISHPKTRQL-----  143

Query  206  GTVSGVSAGL  215
              V+GV AG+
Sbjct  144  --VNGVVAGV  151


 Score = 17.7 bits (34),  Expect = 0.70
 Identities = 6/22 (27%), Positives = 12/22 (55%), Gaps = 0/22 (0%)

Query  121  IVGCIFAWIFGYRDAVSITTIG  142
            +V  + A + GY +   + T+G
Sbjct  143  LVNGVVAGVGGYGNCFGVPTVG  164


 Score = 14.6 bits (26),  Expect = 6.4
 Identities = 5/12 (42%), Positives = 8/12 (67%), Gaps = 0/12 (0%)

Query  136  VSITTIGAGAVT  147
            +SI  +GA  +T
Sbjct  262  ISIQDMGAAGLT  273



Lambda      K        H        a         alpha
   0.329    0.142    0.425    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 153888


  Database: d25ba3deecb20a6aee56c57ad17d1a45.SwissProt.fasta
    Posted date:  May 9, 2024  8:32 AM
  Number of letters in database: 719
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40